diff options
Diffstat (limited to 'examples/h5_subset.c')
-rw-r--r-- | examples/h5_subset.c | 163 |
1 files changed, 77 insertions, 86 deletions
diff --git a/examples/h5_subset.c b/examples/h5_subset.c index 904d3f8..bd680c7 100644 --- a/examples/h5_subset.c +++ b/examples/h5_subset.c @@ -11,97 +11,92 @@ * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -/* - * This example illustrates how to read/write a subset of data (a slab) +/* + * This example illustrates how to read/write a subset of data (a slab) * from/to a dataset in an HDF5 file. It is used in the HDF5 Tutorial. */ - + #include "hdf5.h" #define FILE "subset.h5" -#define DATASETNAME "IntArray" -#define RANK 2 - -#define DIM0_SUB 3 /* subset dimensions */ -#define DIM1_SUB 4 +#define DATASETNAME "IntArray" +#define RANK 2 +#define DIM0_SUB 3 /* subset dimensions */ +#define DIM1_SUB 4 -#define DIM0 8 /* size of dataset */ -#define DIM1 10 +#define DIM0 8 /* size of dataset */ +#define DIM1 10 int -main (void) +main(void) { - hsize_t dims[2], dimsm[2]; - int data[DIM0][DIM1]; /* data to write */ - int sdata[DIM0_SUB][DIM1_SUB]; /* subset to write */ - int rdata[DIM0][DIM1]; /* buffer for read */ - - hid_t file_id, dataset_id; /* handles */ - hid_t dataspace_id, memspace_id; - - herr_t status; - - hsize_t count[2]; /* size of subset in the file */ - hsize_t offset[2]; /* subset offset in the file */ - hsize_t stride[2]; - hsize_t block[2]; - int i, j; - - + hsize_t dims[2], dimsm[2]; + int data[DIM0][DIM1]; /* data to write */ + int sdata[DIM0_SUB][DIM1_SUB]; /* subset to write */ + int rdata[DIM0][DIM1]; /* buffer for read */ + + hid_t file_id, dataset_id; /* handles */ + hid_t dataspace_id, memspace_id; + + herr_t status; + + hsize_t count[2]; /* size of subset in the file */ + hsize_t offset[2]; /* subset offset in the file */ + hsize_t stride[2]; + hsize_t block[2]; + int i, j; + /***************************************************************** * Create a new file with default creation and access properties.* * Then create a dataset and write data to it and close the file * * and dataset. * *****************************************************************/ - file_id = H5Fcreate (FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - - dims[0] = DIM0; - dims[1] = DIM1; - dataspace_id = H5Screate_simple (RANK, dims, NULL); + file_id = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - dataset_id = H5Dcreate2 (file_id, DATASETNAME, H5T_STD_I32BE, dataspace_id, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + dims[0] = DIM0; + dims[1] = DIM1; + dataspace_id = H5Screate_simple(RANK, dims, NULL); + dataset_id = + H5Dcreate2(file_id, DATASETNAME, H5T_STD_I32BE, dataspace_id, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); for (j = 0; j < DIM0; j++) { - for (i = 0; i < DIM1; i++) - if (i< (DIM1/2)) - data[j][i] = 1; + for (i = 0; i < DIM1; i++) + if (i < (DIM1 / 2)) + data[j][i] = 1; else - data[j][i] = 2; - } + data[j][i] = 2; + } - status = H5Dwrite (dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, - H5P_DEFAULT, data); + status = H5Dwrite(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data); - printf ("\nData Written to File:\n"); - for (i = 0; i<DIM0; i++){ - for (j = 0; j<DIM1; j++) - printf (" %i", data[i][j]); - printf ("\n"); + printf("\nData Written to File:\n"); + for (i = 0; i < DIM0; i++) { + for (j = 0; j < DIM1; j++) + printf(" %i", data[i][j]); + printf("\n"); } - status = H5Sclose (dataspace_id); - status = H5Dclose (dataset_id); - status = H5Fclose (file_id); - + status = H5Sclose(dataspace_id); + status = H5Dclose(dataset_id); + status = H5Fclose(file_id); /***************************************************** * Reopen the file and dataset and write a subset of * - * values to the dataset. + * values to the dataset. *****************************************************/ - file_id = H5Fopen (FILE, H5F_ACC_RDWR, H5P_DEFAULT); - dataset_id = H5Dopen2 (file_id, DATASETNAME, H5P_DEFAULT); + file_id = H5Fopen(FILE, H5F_ACC_RDWR, H5P_DEFAULT); + dataset_id = H5Dopen2(file_id, DATASETNAME, H5P_DEFAULT); /* Specify size and shape of subset to write. */ offset[0] = 1; offset[1] = 2; - count[0] = DIM0_SUB; - count[1] = DIM1_SUB; + count[0] = DIM0_SUB; + count[1] = DIM1_SUB; stride[0] = 1; stride[1] = 1; @@ -109,43 +104,39 @@ main (void) block[0] = 1; block[1] = 1; - /* Create memory space with size of subset. Get file dataspace + /* Create memory space with size of subset. Get file dataspace and select subset from file dataspace. */ - dimsm[0] = DIM0_SUB; - dimsm[1] = DIM1_SUB; - memspace_id = H5Screate_simple (RANK, dimsm, NULL); + dimsm[0] = DIM0_SUB; + dimsm[1] = DIM1_SUB; + memspace_id = H5Screate_simple(RANK, dimsm, NULL); - dataspace_id = H5Dget_space (dataset_id); - status = H5Sselect_hyperslab (dataspace_id, H5S_SELECT_SET, offset, - stride, count, block); + dataspace_id = H5Dget_space(dataset_id); + status = H5Sselect_hyperslab(dataspace_id, H5S_SELECT_SET, offset, stride, count, block); - /* Write a subset of data to the dataset, then read the + /* Write a subset of data to the dataset, then read the entire dataset back from the file. */ - printf ("\nWrite subset to file specifying:\n"); - printf (" offset=1x2 stride=1x1 count=3x4 block=1x1\n"); + printf("\nWrite subset to file specifying:\n"); + printf(" offset=1x2 stride=1x1 count=3x4 block=1x1\n"); for (j = 0; j < DIM0_SUB; j++) { - for (i = 0; i < DIM1_SUB; i++) - sdata[j][i] = 5; - } - - status = H5Dwrite (dataset_id, H5T_NATIVE_INT, memspace_id, - dataspace_id, H5P_DEFAULT, sdata); - - status = H5Dread (dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, - H5P_DEFAULT, rdata); - - printf ("\nData in File after Subset is Written:\n"); - for (i = 0; i<DIM0; i++){ - for (j = 0; j<DIM1; j++) - printf (" %i", rdata[i][j]); - printf ("\n"); + for (i = 0; i < DIM1_SUB; i++) + sdata[j][i] = 5; + } + + status = H5Dwrite(dataset_id, H5T_NATIVE_INT, memspace_id, dataspace_id, H5P_DEFAULT, sdata); + + status = H5Dread(dataset_id, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, rdata); + + printf("\nData in File after Subset is Written:\n"); + for (i = 0; i < DIM0; i++) { + for (j = 0; j < DIM1; j++) + printf(" %i", rdata[i][j]); + printf("\n"); } - status = H5Sclose (memspace_id); - status = H5Sclose (dataspace_id); - status = H5Dclose (dataset_id); - status = H5Fclose (file_id); - + status = H5Sclose(memspace_id); + status = H5Sclose(dataspace_id); + status = H5Dclose(dataset_id); + status = H5Fclose(file_id); } |