diff options
Diffstat (limited to 'fortran/src')
| -rw-r--r-- | fortran/src/H5Of.c | 57 | ||||
| -rw-r--r-- | fortran/src/H5Off.f90 | 175 | ||||
| -rw-r--r-- | fortran/src/H5Pff.f90 | 35 | ||||
| -rw-r--r-- | fortran/src/H5f90proto.h | 7 | ||||
| -rw-r--r-- | fortran/src/Makefile.in | 2 | ||||
| -rw-r--r--[-rwxr-xr-x] | fortran/src/h5fc.in | 2 | ||||
| -rw-r--r-- | fortran/src/hdf5_fortrandll.def | 1 | ||||
| -rw-r--r-- | fortran/src/phdf5_fortrandll.def | 1 |
8 files changed, 210 insertions, 70 deletions
diff --git a/fortran/src/H5Of.c b/fortran/src/H5Of.c index 0df433a..531f09c 100644 --- a/fortran/src/H5Of.c +++ b/fortran/src/H5Of.c @@ -334,3 +334,60 @@ nh5oget_info_by_name_c (hid_t_f *loc_id, _fcd name, size_t_f *namelen, hid_t_f * return ret_value; } +/* ***if* H5Of/H5Ocopy_c + * NAME + * H5Ocopy_c + * PURPOSE + * Calls H5Ocopy + * INPUTS + * src_loc_id - Object identifier indicating the location of the source object to be copied + * src_name - Name of the source object to be copied + * src_name_len - Length of src_name + * dst_loc_id - Location identifier specifying the destination + * dst_name - Name to be assigned to the new copy + * dst_name_len - Length of dst_name + * ocpypl_id - Object copy property list + * lcpl_id - Link creation property list for the new hard link + * + * RETURNS + * 0 on success, -1 on failure + * AUTHOR + * M. Scot Breitenfeld + * March 14, 2012 + * SOURCE +*/ +int_f +nh5ocopy_c (hid_t_f *src_loc_id, _fcd src_name, size_t_f *src_name_len, + hid_t_f *dst_loc_id, _fcd dst_name, size_t_f *dst_name_len, + hid_t_f *ocpypl_id, hid_t_f *lcpl_id ) +/******/ +{ + char *c_src_name = NULL; /* Buffer to hold C string */ + char *c_dst_name = NULL; /* Buffer to hold C string */ + + int_f ret_value = 0; /* Return value */ + + /* + * Convert FORTRAN name to C name + */ + if((c_src_name = HD5f2cstring(src_name, (size_t)*src_name_len)) == NULL) + HGOTO_DONE(FAIL); + if((c_dst_name = HD5f2cstring(dst_name, (size_t)*dst_name_len)) == NULL) + HGOTO_DONE(FAIL); + + /* + * Call H5Ocopy function. + */ + if(H5Ocopy( (hid_t)*src_loc_id, c_src_name, (hid_t)*dst_loc_id, c_dst_name, + (hid_t)*ocpypl_id, (hid_t)*lcpl_id) < 0) + HGOTO_DONE(FAIL); + + done: + if(c_src_name) + HDfree(c_src_name); + if(c_dst_name) + HDfree(c_dst_name); + + return ret_value; + +} diff --git a/fortran/src/H5Off.f90 b/fortran/src/H5Off.f90 index e69fdb5..4f1ea18 100644 --- a/fortran/src/H5Off.f90 +++ b/fortran/src/H5Off.f90 @@ -49,33 +49,32 @@ CONTAINS ! ! PURPOSE ! Creates a hard link to an object in an HDF5 file. -! INPUTS +! +! Inputs: ! object_id - Object to be linked. ! new_loc_id - File or group identifier specifying location at which object is to be linked. ! new_link_name - Name of link to be created, relative to new_loc_id. -! OUTPUTS -! hdferr: - error code -! Success: 0 -! Failure: -1 -! OPTIONAL PARAMETERS +! +! Outputs: +! hdferr - Returns 0 if successful and -1 if fails. +! +! Optional parameters: ! lcpl_id - Link creation property list identifier. ! lapl_id - Link access property list identifier. +! ! AUTHOR ! M. Scot Breitenfeld ! April 21, 2008 ! -! SOURCE +! Fortran90 Interface: SUBROUTINE h5olink_f(object_id, new_loc_id, new_link_name, hdferr, lcpl_id, lapl_id) IMPLICIT NONE - INTEGER(HID_T), INTENT(IN) :: object_id ! Object to be linked - INTEGER(HID_T), INTENT(IN) :: new_loc_id ! File or group identifier specifying - ! location at which object is to be linked. - CHARACTER(LEN=*), INTENT(IN) :: new_link_name ! Name of link to be created, relative to new_loc_id. - INTEGER, INTENT(OUT) :: hdferr ! Error code - ! Success: 0 - ! Failure: -1 - INTEGER(HID_T), OPTIONAL, INTENT(IN) :: lcpl_id ! Link creation property list identifier. - INTEGER(HID_T), OPTIONAL, INTENT(IN) :: lapl_id ! Link creation property list identifier. + INTEGER(HID_T) , INTENT(IN) :: object_id + INTEGER(HID_T) , INTENT(IN) :: new_loc_id + CHARACTER(LEN=*), INTENT(IN) :: new_link_name + INTEGER , INTENT(OUT) :: hdferr + INTEGER(HID_T) , INTENT(IN), OPTIONAL :: lcpl_id + INTEGER(HID_T) , INTENT(IN), OPTIONAL :: lapl_id !***** INTEGER(HID_T) :: lapl_id_default INTEGER(HID_T) :: lcpl_id_default @@ -115,33 +114,33 @@ CONTAINS ! ! NAME ! h5oopen_f +! ! PURPOSE ! Opens an object in an HDF5 file by location identifier and path name. ! -! INPUTS -! loc_id - File or group identifier +! Inputs: +! loc_id - File or group identifier. ! name - Path to the object, relative to loc_id. -! OUTPUTS -! obj_id - Object identifier for the opened object -! hdferr: - error code -! Success: 0 -! Failure: -1 -! OPTIONAL PARAMETERS -! lapl_id - Access property list identifier for the link pointing to the object +! +! Outputs: +! obj_id - Object identifier for the opened object. +! hdferr - Returns 0 if successful and -1 if fails. +! +! Optional parameters: +! lapl_id - Access property list identifier for the link pointing to the object. ! ! AUTHOR ! M. Scot Breitenfeld ! April 18, 2008 -! SOURCE +! +! Fortran90 Interface: SUBROUTINE h5oopen_f(loc_id, name, obj_id, hdferr, lapl_id) IMPLICIT NONE - INTEGER(HID_T), INTENT(IN) :: loc_id ! File or group identifier - CHARACTER(LEN=*), INTENT(IN) :: name ! Path to the object, relative to loc_id - INTEGER(HID_T), INTENT(OUT) :: obj_id ! Object identifier for the opened object - INTEGER, INTENT(OUT) :: hdferr ! Error code - ! Success: 0 - ! Failure: -1 - INTEGER(HID_T), OPTIONAL, INTENT(IN) :: lapl_id ! Attribute access property list + INTEGER(HID_T) , INTENT(IN) :: loc_id + CHARACTER(LEN=*), INTENT(IN) :: name + INTEGER(HID_T) , INTENT(OUT) :: obj_id + INTEGER , INTENT(OUT) :: hdferr + INTEGER(HID_T) , INTENT(IN), OPTIONAL :: lapl_id !***** INTEGER(HID_T) :: lapl_id_default INTEGER(SIZE_T) :: namelen @@ -178,20 +177,21 @@ CONTAINS ! PURPOSE ! Closes an object in an HDF5 file. ! -! INPUTS -! object_id - Object identifier -! OUTPUTS -! hdferr - Returns 0 if successful and -1 if fails +! Inputs: +! object_id - Object identifier. +! +! Outputs: +! hdferr - Returns 0 if successful and -1 if fails. ! ! AUTHOR ! M. Scot Breitenfeld ! December 17, 2008 ! -! SOURCE +! Fortran90 Interface: SUBROUTINE h5oclose_f(object_id, hdferr) IMPLICIT NONE - INTEGER(HID_T), INTENT(IN) :: object_id - INTEGER, INTENT(OUT) :: hdferr + INTEGER(HID_T), INTENT(IN) :: object_id + INTEGER , INTENT(OUT) :: hdferr !***** INTERFACE INTEGER FUNCTION h5oclose_c(object_id) @@ -214,25 +214,25 @@ CONTAINS ! PURPOSE ! Opens an object using its address within an HDF5 file. ! -! INPUTS -! loc_id - File or group identifier -! addr - Object’s address in the file -! OUTPUTS: -! obj_id - Object identifier for the opened object -! hdferr - Returns 0 if successful and -1 if fails +! Inputs: +! loc_id - File or group identifier. +! addr - Object’s address in the file. +! +! Outputs: +! obj_id - Object identifier for the opened object. +! hdferr - Returns 0 if successful and -1 if fails. ! ! AUTHOR ! M. Scot Breitenfeld ! September 14, 2009 ! -! SOURCE +! Fortran90 Interface: SUBROUTINE h5oopen_by_addr_f(loc_id, addr, obj_id, hdferr) IMPLICIT NONE - INTEGER(HID_T), INTENT(IN) :: loc_id ! File or group identifier - INTEGER(HADDR_T), INTENT(IN) :: addr ! Object’s address in the file - INTEGER(HID_T), INTENT(OUT) :: obj_id ! Object identifier for the opened object - INTEGER, INTENT(OUT) :: hdferr ! Error code: - ! 0 on success and -1 on failure + INTEGER(HID_T) , INTENT(IN) :: loc_id + INTEGER(HADDR_T), INTENT(IN) :: addr + INTEGER(HID_T) , INTENT(OUT) :: obj_id + INTEGER , INTENT(OUT) :: hdferr !***** INTERFACE INTEGER FUNCTION h5oopen_by_addr_c(loc_id, addr, obj_id) @@ -249,6 +249,77 @@ CONTAINS hdferr = h5oopen_by_addr_c(loc_id, addr, obj_id) END SUBROUTINE h5oopen_by_addr_f +! +!****s* H5O/h5ocopy_f +! NAME +! h5ocopy_f +! +! PURPOSE +! Copies an object in an HDF5 file. +! +! Inputs: +! src_loc_id - Object identifier indicating the location of the source object to be copied. +! src_name - Name of the source object to be copied. +! dst_loc_id - Location identifier specifying the destination. +! dst_name - Name to be assigned to the new copy. +! +! Optional parameters: +! ocpypl_id - Object copy property list. +! lcpl_id - Link creation property list for the new hard link. +! +! Outputs: +! hdferr - Returns 0 if successful and -1 if fails. +! +! AUTHOR +! M. Scot Breitenfeld +! March 14, 2012 +! +! Fortran90 Interface: + SUBROUTINE h5ocopy_f(src_loc_id, src_name, dst_loc_id, dst_name, hdferr, ocpypl_id, lcpl_id) + IMPLICIT NONE + INTEGER(HID_T) , INTENT(IN) :: src_loc_id + CHARACTER(LEN=*), INTENT(IN) :: src_name + INTEGER(HID_T) , INTENT(IN) :: dst_loc_id + CHARACTER(LEN=*), INTENT(IN) :: dst_name + INTEGER , INTENT(OUT) :: hdferr + INTEGER(HID_T) , INTENT(IN), OPTIONAL :: ocpypl_id + INTEGER(HID_T) , INTENT(IN), OPTIONAL :: lcpl_id +!***** + + INTEGER(SIZE_T) :: src_name_len, dst_name_len + INTEGER(HID_T) :: ocpypl_id_default, lcpl_id_default + + INTERFACE + INTEGER FUNCTION h5ocopy_c(src_loc_id, src_name, src_name_len, & + dst_loc_id, dst_name, dst_name_len, ocpypl_id_default, lcpl_id_default) + USE H5GLOBAL + !DEC$IF DEFINED(HDF5F90_WINDOWS) + !DEC$ATTRIBUTES C,reference,decorate,alias:'H5OCOPY_C'::h5ocopy_c + !DEC$ENDIF + !DEC$ATTRIBUTES reference :: src_name, dst_name + INTEGER(HID_T) , INTENT(IN) :: src_loc_id + CHARACTER(LEN=*), INTENT(IN) :: src_name + INTEGER(HID_T) , INTENT(IN) :: dst_loc_id + CHARACTER(LEN=*), INTENT(IN) :: dst_name + INTEGER(HID_T) , INTENT(IN) :: ocpypl_id_default + INTEGER(HID_T) , INTENT(IN) :: lcpl_id_default + INTEGER(SIZE_T) :: src_name_len, dst_name_len + + END FUNCTION h5ocopy_c + END INTERFACE + + src_name_len = LEN(src_name) + dst_name_len = LEN(dst_name) + + ocpypl_id_default = H5P_DEFAULT_F + IF(PRESENT(ocpypl_id)) ocpypl_id_default = ocpypl_id + lcpl_id_default = H5P_DEFAULT_F + IF(PRESENT(lcpl_id)) lcpl_id_default = lcpl_id + + hdferr = h5ocopy_c(src_loc_id, src_name, src_name_len, & + dst_loc_id, dst_name, dst_name_len, ocpypl_id_default, lcpl_id_default) + + END SUBROUTINE h5ocopy_f END MODULE H5O diff --git a/fortran/src/H5Pff.f90 b/fortran/src/H5Pff.f90 index 2d874d0..d50e3b9 100644 --- a/fortran/src/H5Pff.f90 +++ b/fortran/src/H5Pff.f90 @@ -53,11 +53,23 @@ CONTAINS ! INPUTS ! class - type of the property class to be created. ! Possible values are: -! H5P_FILE_CREATE_F -! H5P_FILE_ACCESS_F -! H5P_DATASET_CREATE_F -! H5P_DATASET_XFER_F -! H5P_FILE_MOUNT_F +! H5P_OBJECT_CREATE_F +! H5P_FILE_CREATE_F +! H5P_FILE_ACCESS_F +! H5P_DATASET_CREATE_F +! H5P_DATASET_ACCESS_F +! H5P_DATASET_XFER_F +! H5P_FILE_MOUNT_F +! H5P_GROUP_CREATE_F +! H5P_GROUP_ACCESS_F +! H5P_DATATYPE_CREATE_F +! H5P_DATATYPE_ACCESS_F +! H5P_STRING_CREATE_F +! H5P_ATTRIBUTE_CREATE _F +! H5P_OBJECT_COPY_F +! H5P_LINK_CREATE_F +! H5P_LINK_ACCESS_F +! ! OUTPUTS ! prp_id - property list identifier ! hdferr - error code @@ -76,16 +88,9 @@ CONTAINS ! Fortran90 Interface: SUBROUTINE h5pcreate_f(class, prp_id, hdferr) IMPLICIT NONE - INTEGER(HID_T), INTENT(IN) :: class ! The type of the property list - ! to be created. Possible values are: - ! H5P_FILE_CREATE_F - ! H5P_FILE_ACCESS_F - ! H5P_DATASET_CREATE_F - ! H5P_DATASET_XFER_F - ! H5P_FILE_MOUNT_F - INTEGER(HID_T), INTENT(OUT) :: prp_id ! Property list identifier - INTEGER, INTENT(OUT) :: hdferr ! Error code - ! 0 on success and -1 on failure + INTEGER(HID_T), INTENT(IN) :: class + INTEGER(HID_T), INTENT(OUT) :: prp_id + INTEGER , INTENT(OUT) :: hdferr !***** ! INTEGER, EXTERNAL :: h5pcreate_c ! MS FORTRAN needs explicit interface for C functions called here. diff --git a/fortran/src/H5f90proto.h b/fortran/src/H5f90proto.h index 89957a4..a504653 100644 --- a/fortran/src/H5f90proto.h +++ b/fortran/src/H5f90proto.h @@ -805,10 +805,12 @@ H5_FCDLL int_f nh5tconvert_c(hid_t_f *src_id, hid_t_f *dst_id, size_t_f *nelmts, #define nh5olink_c H5_FC_FUNC_(h5olink_c, H5OLINK_C) #define nh5oopen_c H5_FC_FUNC_(h5oopen_c, H5OOPEN_C) -#define nh5oclose_c H5_FC_FUNC_(h5oclose_c, H5OCLOSE_C) +#define nh5oclose_c H5_FC_FUNC_(h5oclose_c, H5OCLOSE_C) #define nh5ovisit_c H5_FC_FUNC_(h5ovisit_c,H5OVISIT_C) #define nh5oget_info_by_name_c H5_FC_FUNC_(h5oget_info_by_name_c ,H5OGET_INFO_BY_NAME_C) #define nh5oopen_by_addr_c H5_FC_FUNC_(h5oopen_by_addr_c, H5OOPEN_BY_ADDR_C) +#define nh5ocopy_c H5_FC_FUNC_(h5ocopy_c, H5OCOPY_C) + H5_FCDLL int_f nh5oopen_c (hid_t_f *loc_id, _fcd name, size_t_f *namelen, hid_t_f *lapl_id, hid_t_f *obj_id); H5_FCDLL int_f nh5oclose_c (hid_t_f *object_id ); @@ -818,6 +820,9 @@ H5_FCDLL int_f nh5olink_c (hid_t_f *object_id, hid_t_f *new_loc_id, _fcd name, s H5_FCDLL int_f nh5ovisit_c (hid_t_f *group_id, int_f *index_type, int_f *order, H5O_iterate_t op, void *op_data); H5_FCDLL int_f nh5oget_info_by_name_c (hid_t_f *loc_id, _fcd name, size_t_f *namelen,hid_t_f *lapl_id, H5O_info_t_f *object_info); +H5_FCDLL int_f nh5ocopy_c (hid_t_f *src_loc_id, _fcd src_name, size_t_f *src_name_len, + hid_t_f *dst_loc_id, _fcd dst_name, size_t_f *dst_name_len, + hid_t_f *ocpypl_id, hid_t_f *lcpl_id ); /* * Functions from H5Pf.c */ diff --git a/fortran/src/Makefile.in b/fortran/src/Makefile.in index 0ccaf33..c963c83 100644 --- a/fortran/src/Makefile.in +++ b/fortran/src/Makefile.in @@ -478,7 +478,7 @@ CHECK_CLEANFILES = *.chkexe *.chklog *.clog # Add libtool shared library version numbers to the HDF5 library # See libtool versioning documentation online. LT_VERS_INTERFACE = 6 -LT_VERS_REVISION = 101 +LT_VERS_REVISION = 103 LT_VERS_AGE = 0 # Include src directory in both Fortran and C flags (C compiler is used diff --git a/fortran/src/h5fc.in b/fortran/src/h5fc.in index 9e9409d..2d7b5b4 100755..100644 --- a/fortran/src/h5fc.in +++ b/fortran/src/h5fc.in @@ -189,7 +189,7 @@ for arg in $@ ; do get_output_file="yes" fi ;; - -E|-M) + -E|-M|-MT) allargs="$allargs $arg" compile_args="$compile_args $arg" dash_c="yes" diff --git a/fortran/src/hdf5_fortrandll.def b/fortran/src/hdf5_fortrandll.def index 6b3aad8..29e83f5 100644 --- a/fortran/src/hdf5_fortrandll.def +++ b/fortran/src/hdf5_fortrandll.def @@ -284,6 +284,7 @@ H5L_mp_H5LIS_REGISTERED_F H5L_mp_H5LMOVE_F
H5L_mp_H5LGET_NAME_BY_IDX_F
; H5O
+H5O_mp_H5OCOPY_F
H5O_mp_H5OLINK_F
H5O_mp_H5OOPEN_F
H5O_mp_H5OOPEN_BY_ADDR_F
diff --git a/fortran/src/phdf5_fortrandll.def b/fortran/src/phdf5_fortrandll.def index a4bc9eb..7a196cd 100644 --- a/fortran/src/phdf5_fortrandll.def +++ b/fortran/src/phdf5_fortrandll.def @@ -284,6 +284,7 @@ H5L_mp_H5LIS_REGISTERED_F H5L_mp_H5LMOVE_F
H5L_mp_H5LGET_NAME_BY_IDX_F
; H5O
+H5O_mp_H5OCOPY_F
H5O_mp_H5OLINK_F
H5O_mp_H5OOPEN_F
H5O_mp_H5OOPEN_BY_ADDR_F
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