diff options
Diffstat (limited to 'hl')
-rw-r--r-- | hl/src/H5DS.c | 162 | ||||
-rw-r--r-- | hl/test/test_ds.c | 259 |
2 files changed, 330 insertions, 91 deletions
diff --git a/hl/src/H5DS.c b/hl/src/H5DS.c index 10e552b..1d1e245 100644 --- a/hl/src/H5DS.c +++ b/hl/src/H5DS.c @@ -142,13 +142,18 @@ herr_t H5DSattach_scale(hid_t did, H5I_type_t it1, it2; int i, len; int found_ds=0; + htri_t is_scale; /*------------------------------------------------------------------------- * parameter checking *------------------------------------------------------------------------- */ + + if ((is_scale = H5DSis_scale(did)) < 0) + return FAIL; + /* the dataset cannot be a DS dataset */ - if ((H5DSis_scale(did))==1) + if ( is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ @@ -637,13 +642,18 @@ herr_t H5DSdetach_scale(hid_t did, H5O_info_t oi1, oi2, oi3, oi4; int found_dset = 0, found_ds = 0; H5I_type_t it1, it2; + htri_t is_scale; /*------------------------------------------------------------------------- * parameter checking *------------------------------------------------------------------------- */ + + if ((is_scale = H5DSis_scale(did)) < 0) + return FAIL; + /* the dataset cannot be a DS dataset */ - if ((H5DSis_scale(did))==1) + if ( is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ @@ -691,6 +701,9 @@ herr_t H5DSdetach_scale(hid_t did, if (H5Sclose(sid) < 0) return FAIL; + /* parameter range checking */ + if (idx>(unsigned)rank-1) + return FAIL; /*------------------------------------------------------------------------- * find "REFERENCE_LIST" @@ -1022,13 +1035,18 @@ htri_t H5DSis_attached(hid_t did, H5I_type_t it1, it2; int i; int found_dset=0, found_ds=0; + htri_t is_scale; /*------------------------------------------------------------------------- * parameter checking *------------------------------------------------------------------------- */ + + if ((is_scale = H5DSis_scale(did)) < 0) + return FAIL; + /* the dataset cannot be a DS dataset */ - if ((H5DSis_scale(did))==1) + if ( is_scale == 1) return FAIL; /* get info for the dataset in the parameter list */ @@ -1071,7 +1089,7 @@ htri_t H5DSis_attached(hid_t did, /* parameter range checking */ if(idx > ((unsigned)rank - 1)) - goto out; + return FAIL; /* try to find the attribute "DIMENSION_LIST" on the >>data<< dataset */ if((has_dimlist = H5LT_find_attribute(did, DIMENSION_LIST)) < 0) @@ -1339,6 +1357,13 @@ herr_t H5DSiterate_scales(hid_t did, if ((nscales = H5DSget_num_scales(did,dim)) < 0) return FAIL; + /* parameter range checking */ + if (idx!=NULL) + { + if (*idx>=nscales) + return FAIL; + } + /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; @@ -1470,16 +1495,17 @@ out: *------------------------------------------------------------------------- */ -herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { - int has_labels; - hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - int rank; /* rank of dataset */ - hsize_t dims[1]; /* dimensions of dataset */ - const char **buf = NULL; /* buffer to store in the attribute */ - H5I_type_t it; /* ID type */ - unsigned int i; +herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) +{ + int has_labels; + hid_t sid = -1; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + int rank; /* rank of dataset */ + hsize_t dims[1]; /* dimensions of dataset */ + const char **buf = NULL; /* buffer to store in the attribute */ + H5I_type_t it; /* ID type */ + unsigned int i; /*------------------------------------------------------------------------- * parameter checking @@ -1492,16 +1518,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { if (H5I_DATASET != it) return FAIL; - /*------------------------------------------------------------------------- - * attribute "DIMENSION_LABELS" - *------------------------------------------------------------------------- - */ - - /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ - if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) - return FAIL; - - /* get dataset space */ + /* get dataset space */ if ((sid = H5Dget_space(did)) < 0) return FAIL; @@ -1513,12 +1530,25 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { if (H5Sclose(sid) < 0) goto out; + if ( idx >= (unsigned)rank ) + return FAIL; + + /*------------------------------------------------------------------------- + * attribute "DIMENSION_LABELS" + *------------------------------------------------------------------------- + */ + + /* try to find the attribute "DIMENSION_LABELS" on the >>data<< dataset */ + if ((has_labels = H5LT_find_attribute(did, DIMENSION_LABELS)) < 0) + return FAIL; + /*------------------------------------------------------------------------- * make the attribute and insert label *------------------------------------------------------------------------- */ - if (has_labels == 0) { + if (has_labels == 0) + { dims[0] = rank; /* space for the attribute */ @@ -1532,8 +1562,7 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { goto out; /* create the attribute */ - if ((aid = H5Acreate2(did, DIMENSION_LABELS, tid, sid, - H5P_DEFAULT, H5P_DEFAULT)) < 0) + if ((aid = H5Acreate2(did, DIMENSION_LABELS, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) goto out; /* allocate and initialize */ @@ -1571,7 +1600,8 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { *------------------------------------------------------------------------- */ - else { + else + { if ((aid = H5Aopen(did, DIMENSION_LABELS, H5P_DEFAULT)) < 0) goto out; @@ -1603,7 +1633,8 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { buf[idx] = NULL; /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) { + for (i = 0; i < (unsigned int) rank; i++) + { if (buf[i]) free(buf[i]); } @@ -1624,11 +1655,13 @@ herr_t H5DSset_label(hid_t did, unsigned int idx, const char *label) { /* error zone */ out: - if (buf) { + if (buf) + { if (buf[idx]) /* check if we errored during H5Awrite */ buf[idx] = NULL; /* don't free label */ /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) { + for (i = 0; i < (unsigned int) rank; i++) + { if (buf[i]) free(buf[i]); } @@ -1664,17 +1697,18 @@ out: * *------------------------------------------------------------------------- */ -ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { - int has_labels; - hid_t sid; /* space ID */ - hid_t tid = -1; /* attribute type ID */ - hid_t aid = -1; /* attribute ID */ - int rank; /* rank of dataset */ - char **buf = NULL; /* buffer to store in the attribute */ - H5I_type_t it; /* ID type */ - size_t nbytes; - size_t copy_len; - int i; +ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) +{ + int has_labels; + hid_t sid = -1; /* space ID */ + hid_t tid = -1; /* attribute type ID */ + hid_t aid = -1; /* attribute ID */ + int rank; /* rank of dataset */ + char **buf = NULL; /* buffer to store in the attribute */ + H5I_type_t it; /* ID type */ + size_t nbytes; + size_t copy_len; + int i; /*------------------------------------------------------------------------- * parameter checking @@ -1687,6 +1721,21 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { if (H5I_DATASET != it) return FAIL; + /* get dataset space */ + if ((sid = H5Dget_space(did)) < 0) + return FAIL; + + /* get rank */ + if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) + goto out; + + /* close dataset space */ + if (H5Sclose(sid) < 0) + goto out; + + if ( idx >= (unsigned)rank ) + return FAIL; + /*------------------------------------------------------------------------- * attribute "DIMENSION_LABELS" *------------------------------------------------------------------------- @@ -1702,19 +1751,7 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { if (label) label[0] = 0; return 0; - } - - /* get dataset space */ - if ((sid = H5Dget_space(did)) < 0) - return FAIL; - - /* get rank */ - if ((rank = H5Sget_simple_extent_ndims(sid)) < 0) - goto out; - - /* close dataset space */ - if (H5Sclose(sid) < 0) - goto out; + } /*------------------------------------------------------------------------- * open the attribute and read label @@ -1745,7 +1782,8 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { copy_len = MIN(size-1, nbytes); /* copy all/some of the name */ - if (label) { + if (label) + { memcpy(label, buf[idx], copy_len); /* terminate the string */ @@ -1753,7 +1791,8 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { } /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) { + for (i = 0; i < rank; i++) + { if (buf[i]) free(buf[i]); } @@ -1773,9 +1812,11 @@ ssize_t H5DSget_label(hid_t did, unsigned int idx, char *label, size_t size) { /* error zone */ out: - if (buf) { + if (buf) + { /* free all the ptr's from the H5Aread() */ - for (i = 0; i < (unsigned int) rank; i++) { + for (i = 0; i < rank; i++) + { if (buf[i]) free(buf[i]); } @@ -2194,7 +2235,8 @@ herr_t H5DS_is_reserved(hid_t did) /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Tclose(tid); H5Aclose(aid); } H5E_END_TRY; diff --git a/hl/test/test_ds.c b/hl/test/test_ds.c index e4d4260..48f149a 100644 --- a/hl/test/test_ds.c +++ b/hl/test/test_ds.c @@ -24,11 +24,13 @@ static herr_t verify_scale(hid_t dset, unsigned dim, hid_t scale, void *visitor_data); static herr_t read_scale(hid_t dset, unsigned dim, hid_t scale, void *visitor_data); static herr_t match_dim_scale(hid_t did, unsigned dim, hid_t dsid, void *visitor_data); -static herr_t op_bogus(hid_t did, unsigned dim, hid_t dsid, void *visitor_data); +static herr_t op_continue(hid_t did, unsigned dim, hid_t dsid, void *visitor_data); +static herr_t op_stop(hid_t did, unsigned dim, hid_t dsid, void *visitor_data); /* prototypes */ static int test_simple(void); static int test_errors(void); +static int test_errors2(void); static int test_rank(void); static int test_types(void); static int test_iterators(void); @@ -67,6 +69,8 @@ static int read_data( const char* fname, int ndims, hsize_t *dims, float **buf ) #define FILE4 "test_ds4.h5" #define FILE5 "test_ds5.h5" #define FILE6 "test_ds6.h5" +#define FILE7 "test_ds7.h5" + @@ -84,6 +88,7 @@ int main(void) nerrors += test_iterators() < 0 ?1:0; nerrors += test_types() < 0 ?1:0; nerrors += test_data() < 0 ?1:0; + nerrors += test_errors2() < 0 ?1:0; if(nerrors) goto error; printf("All dimension scales tests passed.\n"); @@ -116,13 +121,13 @@ error: static int test_simple(void) { - hid_t fid; /* file ID */ + hid_t fid = -1; /* file ID */ hid_t did = -1; /* dataset ID */ - hid_t dsid; /* DS dataset ID */ - hid_t sid; /* space ID */ - hid_t gid; /* group ID */ - int rank = RANK; /* rank of data dataset */ - int rankds = 1; /* rank of DS dataset */ + hid_t dsid = -1; /* DS dataset ID */ + hid_t sid = -1; /* space ID */ + hid_t gid = -1; /* group ID */ + int rank = RANK; /* rank of data dataset */ + int rankds = 1; /* rank of DS dataset */ hsize_t dims[RANK] = {DIM1_SIZE,DIM2_SIZE}; /* size of data dataset */ int buf[DIM_DATA] = {1,2,3,4,5,6,7,8,9,10,11,12}; /* data of data dataset */ hsize_t s1_dim[1] = {DIM1_SIZE}; /* size of DS 1 dataset */ @@ -1434,11 +1439,15 @@ static int test_simple(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); + H5Dclose(dsid); H5Fclose(fid); + H5Sclose(sid); + H5Gclose(gid); } H5E_END_TRY; H5_FAILED(); return FAIL; @@ -1508,7 +1517,7 @@ static herr_t verify_scale(hid_t dset, unsigned dim, hid_t scale_id, void *visit static herr_t read_scale(hid_t dset, unsigned dim, hid_t scale_id, void *visitor_data) { int ret = 0; /* define a default zero value for return. This will cause the iterator to continue */ - hid_t sid; /* space ID */ + hid_t sid = -1; /* space ID */ hid_t tid = -1; /* file type ID */ hid_t mtid = -1; /* memory type ID */ hssize_t nelmts; /* number of data elements */ @@ -1568,14 +1577,17 @@ static herr_t read_scale(hid_t dset, unsigned dim, hid_t scale_id, void *visitor return ret; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Tclose(tid); H5Tclose(mtid); if(buf) + { free(buf); + } } H5E_END_TRY; return FAIL; @@ -1657,7 +1669,8 @@ static herr_t match_dim_scale(hid_t did, unsigned dim, hid_t dsid, void *visitor return ret; out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); } H5E_END_TRY; return FAIL; @@ -1665,7 +1678,7 @@ out: /*------------------------------------------------------------------------- - * Function: op_bogus + * Function: op_continue * * Purpose: example operator function used by H5DSiterate_scales, that does nothing * @@ -1680,7 +1693,7 @@ out: *------------------------------------------------------------------------- */ -static herr_t op_bogus(hid_t dset, unsigned dim, hid_t scale_id, void *visitor_data) +static herr_t op_continue(hid_t dset, unsigned dim, hid_t scale_id, void *visitor_data) { /* Stop compiler from whining about "unused parameters" */ dset = dset; @@ -1693,6 +1706,36 @@ static herr_t op_bogus(hid_t dset, unsigned dim, hid_t scale_id, void *visitor_d } +/*------------------------------------------------------------------------- + * Function: op_stop + * + * Purpose: example operator function used by H5DSiterate_scales, that does nothing + * + * Return: + * The return values from an operator are: + * Zero causes the iterator to continue, returning zero when all group members have been processed. + * Positive causes the iterator to immediately return that positive value, indicating + * short-circuit success. The iterator can be restarted at the next group member. + * Negative causes the iterator to immediately return that value, indicating failure. + * The iterator can be restarted at the next group member. + * + *------------------------------------------------------------------------- + */ + +static herr_t op_stop(hid_t dset, unsigned dim, hid_t scale_id, void *visitor_data) +{ + /* Stop compiler from whining about "unused parameters" */ + dset = dset; + dim = dim; + scale_id = scale_id; + visitor_data = visitor_data; + + /* define a default 1 value for return. This will cause the iterator to stop */ + return 1; +} + + + /*------------------------------------------------------------------------- * test error conditions @@ -2057,9 +2100,10 @@ static int test_errors(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Sclose(sid); H5Sclose(sidds); H5Dclose(did); @@ -2086,8 +2130,8 @@ static int test_iterators(void) hsize_t dims[RANK] = {DIM1_SIZE,DIM2_SIZE}; /* size of data dataset */ hsize_t s1_dim[1] = {DIM1_SIZE}; /* size of DS 1 dataset */ hid_t gid = -1; /* group ID */ - hid_t did; /* dataset ID */ - hid_t dsid; /* scale ID */ + hid_t did = -1; /* dataset ID */ + hid_t dsid = -1; /* scale ID */ char dname[30]; /* dataset name */ int i; @@ -2186,7 +2230,7 @@ static int test_iterators(void) } /* iterate trough the 1st dimension of "dset_a" */ - if(H5DSiterate_scales(did,0,NULL,op_bogus,NULL) < 0) + if(H5DSiterate_scales(did,0,NULL,op_continue,NULL) < 0) goto out; /* close */ @@ -2232,7 +2276,7 @@ static int test_iterators(void) goto out; /* iterate */ - if(H5DSiterate_scales(did, 0, NULL, op_bogus, NULL) == SUCCEED) + if(H5DSiterate_scales(did, 0, NULL, op_continue, NULL) == SUCCEED) goto out; /* close */ @@ -2248,10 +2292,12 @@ static int test_iterators(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Gclose(gid); + H5Dclose(did); H5Fclose(fid); } H5E_END_TRY; H5_FAILED(); @@ -2269,8 +2315,8 @@ static int test_rank(void) hid_t fid; /* file ID */ hid_t did = -1; /* dataset ID */ hid_t dsid = -1; /* scale ID */ - hid_t sid; /* space ID */ - hid_t sidds; /* space ID */ + hid_t sid = -1; /* space ID */ + hid_t sidds = -1; /* space ID */ hsize_t dims1[1] = {DIM1_SIZE}; /* size of data dataset */ hsize_t dims2[2] = {DIM1_SIZE,DIM2_SIZE}; /* size of data dataset */ hsize_t dims3[3] = {DIM1_SIZE,DIM2_SIZE,DIM3_SIZE}; /* size of data dataset */ @@ -2455,11 +2501,14 @@ static int test_rank(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Dclose(dsid); + H5Sclose(sidds); + H5Sclose(sid); H5Fclose(fid); } H5E_END_TRY; H5_FAILED(); @@ -2632,9 +2681,10 @@ static int test_types(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Dclose(dsid); H5Fclose(fid); @@ -2790,9 +2840,10 @@ static int test_data(void) return 0; - /* error zone, gracefully close */ + /* error zone */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Dclose(did); H5Dclose(dsid); H5Fclose(fid); @@ -2882,3 +2933,149 @@ static int read_data( const char* fname, } +/*------------------------------------------------------------------------- + * test parameter errors + *------------------------------------------------------------------------- + */ + +static int test_errors2(void) +{ + hid_t fid; /* file ID */ + hid_t did = -1; /* dataset ID */ + hid_t dsid = -1; /* scale ID */ + hsize_t dimd[2] = {3,3}; /* size of data dataset */ + hsize_t dims[1] = {3}; /* size of scale dataset */ + char lbuf[255]; /* label buffer */ + size_t label_len; + int ds_idx; + + printf("Testing parameter errors\n"); + + /*------------------------------------------------------------------------- + * create a file, a dataset, scales + *------------------------------------------------------------------------- + */ + + /* create a file using default properties */ + if ((fid=H5Fcreate(FILE7,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0) + goto out; + + /* make a dataset */ + if (H5LTmake_dataset_int(fid,"dset",2,dimd,NULL) < 0) + goto out; + + /* make a scale dataset */ + if(H5LTmake_dataset_int(fid,"ds1",1,dims,NULL) < 0) + goto out; + + + /*------------------------------------------------------------------------- + * attach with invalid indices + *------------------------------------------------------------------------- + */ + + if ((did = H5Dopen2(fid,"dset", H5P_DEFAULT)) < 0) + goto out; + if ((dsid = H5Dopen2(fid,"ds1", H5P_DEFAULT)) < 0) + goto out; + if (H5DSattach_scale(did,dsid,2) == SUCCEED) + goto out; + if (H5DSattach_scale(did,dsid,0) < 0) + goto out; + if (H5Dclose(dsid) < 0) + goto out; + if (H5Dclose(did) < 0) + goto out; + + /*------------------------------------------------------------------------- + * detach with invalid indices + *------------------------------------------------------------------------- + */ + if ((did = H5Dopen2(fid,"dset", H5P_DEFAULT)) < 0) + goto out; + if ((dsid = H5Dopen2(fid,"ds1", H5P_DEFAULT)) < 0) + goto out; + if (H5DSdetach_scale(did,dsid,2) == SUCCEED) + goto out; + if (H5DSdetach_scale(did,dsid,0) < 0) + goto out; + if (H5Dclose(dsid) < 0) + goto out; + if (H5Dclose(did) < 0) + goto out; + + /*------------------------------------------------------------------------- + * set/get label invalid indices + *------------------------------------------------------------------------- + */ + if ((did = H5Dopen2(fid,"dset", H5P_DEFAULT)) < 0) + goto out; + if (H5DSset_label(did,2,"label")== SUCCEED) + goto out; + if (H5DSset_label(did,0,"label") < 0) + goto out; + if (H5DSget_label(did,2,lbuf,sizeof(lbuf)) == SUCCEED) + goto out; + if ((label_len=H5DSget_label(did,0,NULL,0)) < 0) + goto out; + if ( label_len != strlen("label") ) + goto out; + if (H5DSget_label(did,0,lbuf,sizeof(lbuf)) < 0) + goto out; + if (H5Dclose(did) < 0) + goto out; + + + /*------------------------------------------------------------------------- + * iterate_scales invalid indices + *------------------------------------------------------------------------- + */ + if ((did = H5Dopen2(fid,"dset", H5P_DEFAULT)) < 0) + goto out; + if ((dsid = H5Dopen2(fid,"ds1", H5P_DEFAULT)) < 0) + goto out; + if (H5DSattach_scale(did,dsid,0) < 0) + goto out; + if (H5Dclose(dsid) < 0) + goto out; + + + if (H5DSiterate_scales(did,2,NULL,op_continue,NULL)== SUCCEED) + goto out; + ds_idx = 2; /* invalid */ + if (H5DSiterate_scales(did,0,&ds_idx,op_continue,NULL)== SUCCEED) + goto out; + if (H5DSiterate_scales(did,0,NULL,op_continue,NULL) < 0) + goto out; + ds_idx = 0; + /* stop at first scale iteration and return ds_idx*/ + if (H5DSiterate_scales(did,0,&ds_idx,op_stop,NULL) < 0) + goto out; + if ( ds_idx != 0 ) + { + goto out; + } + + if (H5Dclose(did) < 0) + goto out; + + /*------------------------------------------------------------------------- + * close + *------------------------------------------------------------------------- + */ + if(H5Fclose(fid) < 0) + goto out; + + return 0; + + /* error zone */ +out: + H5E_BEGIN_TRY + { + H5Dclose(did); + H5Dclose(dsid); + H5Fclose(fid); + } H5E_END_TRY; + H5_FAILED(); + return FAIL; +}
\ No newline at end of file |