diff options
Diffstat (limited to 'hl')
-rw-r--r-- | hl/Makefile.am | 6 | ||||
-rwxr-xr-x | hl/Makefile.in | 4 | ||||
-rw-r--r-- | hl/c++/Makefile.am | 24 | ||||
-rw-r--r-- | hl/c++/Makefile.in | 717 | ||||
-rw-r--r-- | hl/c++/src/H5PacketTable.cpp | 293 | ||||
-rw-r--r-- | hl/c++/src/H5PacketTable.h | 212 | ||||
-rw-r--r-- | hl/c++/src/Makefile.am | 40 | ||||
-rw-r--r-- | hl/c++/src/Makefile.in | 739 | ||||
-rw-r--r-- | hl/c++/test/Makefile.am | 37 | ||||
-rw-r--r-- | hl/c++/test/Makefile.in | 688 | ||||
-rw-r--r-- | hl/c++/test/ptableTest.cpp | 398 | ||||
-rw-r--r-- | hl/c++/test/ptableTest.h | 39 | ||||
-rw-r--r-- | hl/fortran/Makefile.in | 1 | ||||
-rw-r--r-- | hl/fortran/src/Makefile.in | 1 | ||||
-rw-r--r-- | hl/fortran/test/Makefile.in | 1 | ||||
-rw-r--r-- | hl/src/Makefile.in | 1 | ||||
-rw-r--r-- | hl/test/Makefile.in | 1 | ||||
-rw-r--r-- | hl/tools/gif2h5/Makefile.in | 1 |
18 files changed, 3199 insertions, 4 deletions
diff --git a/hl/Makefile.am b/hl/Makefile.am index 780e494..4e6db6a 100644 --- a/hl/Makefile.am +++ b/hl/Makefile.am @@ -20,9 +20,9 @@ include $(top_srcdir)/config/commence.am if BUILD_FORTRAN_CONDITIONAL FORTRAN_DIR = fortran endif -##if BUILD_CXX_CONDITIONAL -## CXX_DIR = c++ -##endif +if BUILD_CXX_CONDITIONAL + CXX_DIR = c++ +endif SUBDIRS=src test $(CXX_DIR) $(FORTRAN_DIR) diff --git a/hl/Makefile.in b/hl/Makefile.in index 634e3bd..81124d6 100755 --- a/hl/Makefile.in +++ b/hl/Makefile.in @@ -67,7 +67,7 @@ RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \ uninstall-recursive ETAGS = etags CTAGS = ctags -DIST_SUBDIRS = src test fortran +DIST_SUBDIRS = src test c++ fortran DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) # Set the paths for autotools to be correct on heping. @@ -254,6 +254,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples @@ -262,6 +263,7 @@ H5CC_PP = $(bindir)/h5pcc H5FC = $(bindir)/h5fc H5FC_PP = $(bindir)/h5pfc @BUILD_FORTRAN_CONDITIONAL_TRUE@FORTRAN_DIR = fortran +@BUILD_CXX_CONDITIONAL_TRUE@CXX_DIR = c++ SUBDIRS = src test $(CXX_DIR) $(FORTRAN_DIR) # Automake needs to be taught how to build lib, progs, and tests targets. diff --git a/hl/c++/Makefile.am b/hl/c++/Makefile.am new file mode 100644 index 0000000..a2d4315 --- /dev/null +++ b/hl/c++/Makefile.am @@ -0,0 +1,24 @@ +# +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. +## +## Makefile.am +## Run automake to generate a Makefile.in from this file. +# +# High-Level API C++ Makefile(.in) +# + +include $(top_srcdir)/config/commence.am + +SUBDIRS=src test + +include $(top_srcdir)/config/conclude.am diff --git a/hl/c++/Makefile.in b/hl/c++/Makefile.in new file mode 100644 index 0000000..11108e0 --- /dev/null +++ b/hl/c++/Makefile.in @@ -0,0 +1,717 @@ +# Makefile.in generated by automake 1.9.5 from Makefile.am. +# @configure_input@ + +# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, +# 2003, 2004, 2005 Free Software Foundation, Inc. +# This Makefile.in is free software; the Free Software Foundation +# gives unlimited permission to copy and/or distribute it, +# with or without modifications, as long as this notice is preserved. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY, to the extent permitted by law; without +# even the implied warranty of MERCHANTABILITY or FITNESS FOR A +# PARTICULAR PURPOSE. + +@SET_MAKE@ + +# +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. +# +# High-Level API C++ Makefile(.in) +# +srcdir = @srcdir@ +top_srcdir = @top_srcdir@ +VPATH = @srcdir@ +pkgdatadir = $(datadir)/@PACKAGE@ +pkglibdir = $(libdir)/@PACKAGE@ +pkgincludedir = $(includedir)/@PACKAGE@ +top_builddir = ../.. +am__cd = CDPATH="$${ZSH_VERSION+.}$(PATH_SEPARATOR)" && cd +INSTALL = @INSTALL@ +install_sh_DATA = $(install_sh) -c -m 644 +install_sh_PROGRAM = $(install_sh) -c +install_sh_SCRIPT = $(install_sh) -c +INSTALL_HEADER = $(INSTALL_DATA) +transform = $(program_transform_name) +NORMAL_INSTALL = : +PRE_INSTALL = : +POST_INSTALL = : +NORMAL_UNINSTALL = : +PRE_UNINSTALL = : +POST_UNINSTALL = : +build_triplet = @build@ +host_triplet = @host@ +DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \ + $(top_srcdir)/config/commence.am \ + $(top_srcdir)/config/conclude.am +subdir = hl/c++ +ACLOCAL_M4 = $(top_srcdir)/aclocal.m4 +am__aclocal_m4_deps = $(top_srcdir)/configure.in +am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \ + $(ACLOCAL_M4) +mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs +CONFIG_HEADER = $(top_builddir)/src/H5config.h +CONFIG_CLEAN_FILES = +SOURCES = +DIST_SOURCES = +RECURSIVE_TARGETS = all-recursive check-recursive dvi-recursive \ + html-recursive info-recursive install-data-recursive \ + install-exec-recursive install-info-recursive \ + install-recursive installcheck-recursive installdirs-recursive \ + pdf-recursive ps-recursive uninstall-info-recursive \ + uninstall-recursive +ETAGS = etags +CTAGS = ctags +DIST_SUBDIRS = $(SUBDIRS) +DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST) + +# Set the paths for autotools to be correct on heping. +# Ideally, these tools should never be needed during the build. +ACLOCAL = /usr/bin/aclocal +ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@ +AMDEP_FALSE = @AMDEP_FALSE@ +AMDEP_TRUE = @AMDEP_TRUE@ +AMTAR = @AMTAR@ +AM_MAKEFLAGS = @AM_MAKEFLAGS@ +AR = @AR@ +AUTOCONF = /usr/local/autoconf-2.59/bin/autoconf +AUTOHEADER = /usr/local/autoconf-2.59/bin/autoheader +AUTOMAKE = /usr/bin/automake +AWK = @AWK@ +BUILD_CXX_CONDITIONAL_FALSE = @BUILD_CXX_CONDITIONAL_FALSE@ +BUILD_CXX_CONDITIONAL_TRUE = @BUILD_CXX_CONDITIONAL_TRUE@ +BUILD_FORTRAN_CONDITIONAL_FALSE = @BUILD_FORTRAN_CONDITIONAL_FALSE@ +BUILD_FORTRAN_CONDITIONAL_TRUE = @BUILD_FORTRAN_CONDITIONAL_TRUE@ +BUILD_HDF5_HL_CONDITIONAL_FALSE = @BUILD_HDF5_HL_CONDITIONAL_FALSE@ +BUILD_HDF5_HL_CONDITIONAL_TRUE = @BUILD_HDF5_HL_CONDITIONAL_TRUE@ +BUILD_PABLO_CONDITIONAL_FALSE = @BUILD_PABLO_CONDITIONAL_FALSE@ +BUILD_PABLO_CONDITIONAL_TRUE = @BUILD_PABLO_CONDITIONAL_TRUE@ +BUILD_PARALLEL_CONDITIONAL_FALSE = @BUILD_PARALLEL_CONDITIONAL_FALSE@ +BUILD_PARALLEL_CONDITIONAL_TRUE = @BUILD_PARALLEL_CONDITIONAL_TRUE@ +BUILD_PDB2HDF = @BUILD_PDB2HDF@ +BUILD_PDB2HDF_CONDITIONAL_FALSE = @BUILD_PDB2HDF_CONDITIONAL_FALSE@ +BUILD_PDB2HDF_CONDITIONAL_TRUE = @BUILD_PDB2HDF_CONDITIONAL_TRUE@ +BYTESEX = @BYTESEX@ +CC = @CC@ +CCDEPMODE = @CCDEPMODE@ +CC_VERSION = @CC_VERSION@ +CFLAGS = @CFLAGS@ +CONFIG_DATE = @CONFIG_DATE@ +CONFIG_MODE = @CONFIG_MODE@ +CONFIG_USER = @CONFIG_USER@ +CPP = @CPP@ +CPPFLAGS = @CPPFLAGS@ +CXX = @CXX@ +CXXCPP = @CXXCPP@ +CXXDEPMODE = @CXXDEPMODE@ +CXXFLAGS = @CXXFLAGS@ +CYGPATH_W = @CYGPATH_W@ +DEBUG_PKG = @DEBUG_PKG@ +DEFS = @DEFS@ +DEPDIR = @DEPDIR@ +DYNAMIC_DIRS = @DYNAMIC_DIRS@ +ECHO = @ECHO@ +ECHO_C = @ECHO_C@ +ECHO_N = @ECHO_N@ +ECHO_T = @ECHO_T@ +EGREP = @EGREP@ +EXEEXT = @EXEEXT@ +F77 = @F77@ + +# Make sure that these variables are exported to the Makefiles +F9XMODEXT = @F9XMODEXT@ +F9XMODFLAG = @F9XMODFLAG@ +F9XSUFFIXFLAG = @F9XSUFFIXFLAG@ +FC = @FC@ +FCFLAGS = @FCFLAGS@ +FFLAGS = @FFLAGS@ +FILTERS = @FILTERS@ +FSEARCH_DIRS = @FSEARCH_DIRS@ +H5_VERSION = @H5_VERSION@ +HADDR_T = @HADDR_T@ +HDF5_INTERFACES = @HDF5_INTERFACES@ +HID_T = @HID_T@ +HL = @HL@ +HL_FOR = @HL_FOR@ +HSIZET = @HSIZET@ +HSIZE_T = @HSIZE_T@ +HSSIZE_T = @HSSIZE_T@ +INSTALL_DATA = @INSTALL_DATA@ +INSTALL_PROGRAM = @INSTALL_PROGRAM@ +INSTALL_SCRIPT = @INSTALL_SCRIPT@ +INSTALL_STRIP_PROGRAM = @INSTALL_STRIP_PROGRAM@ +INSTRUMENT_LIBRARY = @INSTRUMENT_LIBRARY@ +LDFLAGS = @LDFLAGS@ +LIBOBJS = @LIBOBJS@ +LIBS = @LIBS@ +LIBTOOL = @LIBTOOL@ +LN_S = @LN_S@ +LTLIBOBJS = @LTLIBOBJS@ +LT_STATIC_EXEC = @LT_STATIC_EXEC@ +MAINT = @MAINT@ +MAINTAINER_MODE_FALSE = @MAINTAINER_MODE_FALSE@ +MAINTAINER_MODE_TRUE = @MAINTAINER_MODE_TRUE@ +MAKEINFO = @MAKEINFO@ +MPE = @MPE@ +OBJECT_NAMELEN_DEFAULT_F = @OBJECT_NAMELEN_DEFAULT_F@ +OBJEXT = @OBJEXT@ +PACKAGE = @PACKAGE@ +PACKAGE_BUGREPORT = @PACKAGE_BUGREPORT@ +PACKAGE_NAME = @PACKAGE_NAME@ +PACKAGE_STRING = @PACKAGE_STRING@ +PACKAGE_TARNAME = @PACKAGE_TARNAME@ +PACKAGE_VERSION = @PACKAGE_VERSION@ +PARALLEL = @PARALLEL@ +PATH_SEPARATOR = @PATH_SEPARATOR@ +PERL = @PERL@ +PTHREAD = @PTHREAD@ +RANLIB = @RANLIB@ +ROOT = @ROOT@ +RUNPARALLEL = @RUNPARALLEL@ +RUNSERIAL = @RUNSERIAL@ +R_INTEGER = @R_INTEGER@ +R_LARGE = @R_LARGE@ +SEARCH = @SEARCH@ +SETX = @SETX@ +SET_MAKE = @SET_MAKE@ +SHELL = @SHELL@ +SIZE_T = @SIZE_T@ +SRB = @SRB@ +STATIC_SHARED = @STATIC_SHARED@ +STRIP = @STRIP@ +TESTPARALLEL = @TESTPARALLEL@ +TESTSRB = @TESTSRB@ +TRACE_API = @TRACE_API@ +USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@ +USE_FILTER_FLETCHER32 = @USE_FILTER_FLETCHER32@ +USE_FILTER_NBIT = @USE_FILTER_NBIT@ +USE_FILTER_SCALEOFFSET = @USE_FILTER_SCALEOFFSET@ +USE_FILTER_SHUFFLE = @USE_FILTER_SHUFFLE@ +USE_FILTER_SZIP = @USE_FILTER_SZIP@ +VERSION = @VERSION@ +ac_ct_AR = @ac_ct_AR@ +ac_ct_CC = @ac_ct_CC@ +ac_ct_CXX = @ac_ct_CXX@ +ac_ct_F77 = @ac_ct_F77@ +ac_ct_FC = @ac_ct_FC@ +ac_ct_RANLIB = @ac_ct_RANLIB@ +ac_ct_STRIP = @ac_ct_STRIP@ +am__fastdepCC_FALSE = @am__fastdepCC_FALSE@ +am__fastdepCC_TRUE = @am__fastdepCC_TRUE@ +am__fastdepCXX_FALSE = @am__fastdepCXX_FALSE@ +am__fastdepCXX_TRUE = @am__fastdepCXX_TRUE@ +am__include = @am__include@ +am__leading_dot = @am__leading_dot@ +am__quote = @am__quote@ +am__tar = @am__tar@ +am__untar = @am__untar@ +bindir = @bindir@ +build = @build@ +build_alias = @build_alias@ +build_cpu = @build_cpu@ +build_os = @build_os@ +build_vendor = @build_vendor@ +datadir = @datadir@ +exec_prefix = @exec_prefix@ +host = @host@ +host_alias = @host_alias@ +host_cpu = @host_cpu@ +host_os = @host_os@ +host_vendor = @host_vendor@ + +# Install directories that automake doesn't know about +includedir = $(exec_prefix)/include +infodir = @infodir@ +install_sh = @install_sh@ +libdir = @libdir@ +libexecdir = @libexecdir@ +localstatedir = @localstatedir@ +mandir = @mandir@ +mkdir_p = @mkdir_p@ +oldincludedir = @oldincludedir@ +prefix = @prefix@ +program_transform_name = @program_transform_name@ +sbindir = @sbindir@ +sharedstatedir = @sharedstatedir@ +sysconfdir = @sysconfdir@ +target_alias = @target_alias@ + +# Shell commands used in Makefiles +RM = rm -f +CP = cp + +# Libraries to link to while building +LIBHDF5 = $(top_builddir)/src/libhdf5.la +LIBH5TEST = $(top_builddir)/test/libh5test.la +LIBH5F = $(top_builddir)/fortran/src/libhdf5_fortran.la +LIBH5FTEST = $(top_builddir)/fortran/test/libh5test_fortran.la +LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la +LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la +LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la +LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la +docdir = $(exec_prefix)/doc + +# Scripts used to build examples +H5CC = $(bindir)/h5cc +H5CC_PP = $(bindir)/h5pcc +H5FC = $(bindir)/h5fc +H5FC_PP = $(bindir)/h5pfc +SUBDIRS = src test + +# Automake needs to be taught how to build lib, progs, and tests targets. +# These will be filled in automatically for the most part (e.g., +# lib_LIBRARIES are built for lib target), but EXTRA_LIB, EXTRA_PROG, and +# EXTRA_TEST variables are supplied to allow the user to force targets to +# be built at certain times. +LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \ + $(noinst_LTLIBRARIES) $(check_LIBRARIES) $(check_LTLIBRARIES) $(EXTRA_LIB) + +PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \ + $(EXTRA_PROG) + +TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST) +all: all-recursive + +.SUFFIXES: +$(srcdir)/Makefile.in: @MAINTAINER_MODE_TRUE@ $(srcdir)/Makefile.am $(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am $(am__configure_deps) + @for dep in $?; do \ + case '$(am__configure_deps)' in \ + *$$dep*) \ + cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh \ + && exit 0; \ + exit 1;; \ + esac; \ + done; \ + echo ' cd $(top_srcdir) && $(AUTOMAKE) --foreign hl/c++/Makefile'; \ + cd $(top_srcdir) && \ + $(AUTOMAKE) --foreign hl/c++/Makefile +.PRECIOUS: Makefile +Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status + @case '$?' in \ + *config.status*) \ + cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh;; \ + *) \ + echo ' cd $(top_builddir) && $(SHELL) 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tests :: + @$(MAKE) $(AM_MAKEFLAGS) build-$@ || exit 1; \ + for d in X $(SUBDIRS); do \ + if test $$d != X -a $$d != .; then \ + (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \ + fi; \ + done + +# Tell Automake to build tests when the user types `make all' (this is +# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since +# Automake won't build them automatically, either. +all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS) + +# make install-doc doesn't do anything outside of doc directory, but +# Makefiles should recognize it. +install-doc uninstall-doc: + @echo "Nothing to be done." + +# Run each test in order, passing $(TEST_FLAGS) to the program. +# Since tests are done in a shell loop, "make -i" does apply inside it. +# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop. +# The timestamps give a rough idea how much time the tests use. +# +# Note that targets in TESTS (defined above) will be built when the user +# types 'make tests' or 'make check', but only programs in TEST_PROG, +# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed. +check-TESTS: test + +test _test: $(PROGS) $(TESTS) + @if test -n "$(TEST_PROG)$(TEST_PROG_PARA)$(TEST_SCRIPT)"; then \ + echo "===Tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \ + fi + @for test in $(TEST_PROG) dummy; do \ + if test $$test != dummy; then \ + echo "============================"; \ + if test "X$(HDF_FORTRAN)" = "Xyes"; then \ + echo "Fortran API: Testing $$test $(TEST_FLAGS)"; \ + elif test "X$(HDF_CXX)" = "Xyes"; then \ + echo "C++ API: Testing $$test $(TEST_FLAGS)"; \ + else \ + echo "Testing $$test $(TEST_FLAGS)"; \ + fi; \ + echo "============================"; \ + srcdir="$(srcdir)" \ + $(RUNTEST) ./$$test $(TEST_FLAGS) || \ + (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \ + break; \ + echo ""; \ + fi; \ + done; \ + test $$test = dummy || false + @if test -n "$(TEST_PROG_PARA)"; then \ + echo "**** Hint ****"; \ + echo "Parallel test files reside in the current directory" \ + "by default."; \ + echo "Set HDF5_PARAPREFIX to use another directory. 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Returns -1 if the table is + * invalid (not open). + */ + int PacketTable::IsVariableLength() + { + return H5PTis_varlen(table_id); + } + + /* ResetIndex + * Sets the "current record" to the first record in the packet table + */ + void PacketTable::ResetIndex() + { + H5PTcreate_index(table_id); + } + + /* SetIndex + * Sets the current record to point to the record specified by index. + * Returns 0 on success, negative on failure (if index is out of bounds) + */ + int PacketTable::SetIndex(unsigned int index) + { + return H5PTset_index(table_id, index); + } + + /* GetPacketCount + * Returns the number of records in the packet table. Error + * is set to 0 on success. On failure, returns 0 and + * error is set to negative. + */ + unsigned int PacketTable::GetPacketCount(int& error) + { + hsize_t nrecords; + + error = H5PTget_num_packets( table_id, (hsize_t *)&nrecords); + return nrecords; + } + + /********************************/ + /* Fixed-Length Packet Table */ + /********************************/ + + /* Constructor + * Creates a packet table in which to store fixed length records. + * Takes the ID of the file the packet table will be created in, the name of + * the packet table, the ID of the datatype of the set, and the size + * of a memory chunk used in chunking. + */ + FL_PacketTable::FL_PacketTable(hid_t fileID, char* name, hid_t dtypeID, int chunkSize) + { + table_id = H5PTcreate_fl ( fileID, name, dtypeID, chunkSize); + } + + /* "Open" Constructor + * Opens an existing fixed-length packet table. + * Fails if the packet table specified is variable-length. + */ + FL_PacketTable::FL_PacketTable(hid_t fileID, char* name) : PacketTable(fileID, name) + { + if( H5PTis_varlen(table_id) != 0 ) // If this is not a fixed-length table + { + H5PTclose(table_id); + table_id = NULL; + } + } + + /* AppendPacket + * Adds a single packet to the packet table. Takes a pointer + * to the location of the data in memory. + * Returns 0 on success, negative on failure + */ + int FL_PacketTable::AppendPacket(void * data) + { + return H5PTappend(table_id, 1, data); + } + + /* AppendPackets (multiple packets) + * Adds multiple records to the packet table. Takes the number of records to be + * added and a pointer to their location in memory. + * Returns 0 on success, -1 on failure. + */ + int FL_PacketTable::AppendPackets(unsigned int numRecords, void * data) + { + return H5PTappend(table_id, numRecords, data); + } + + /* GetPacket (indexed) + * Gets a single packet from the packet table. Takes the index + * of the record (with 0 being the first record) and a pointer + * to memory where the data should be stored. + * Returns 0 on success, negative on failure + */ + int FL_PacketTable::GetPacket(unsigned int index, void * data) + { + return H5PTread_packets(table_id, index, 1, data); + } + + /* GetPackets (multiple packets) + * Gets multiple packets at once, all records between + * startIndex and endIndex inclusive. Also takes a pointer to + * the memory where these records should be stored. + * Returns 0 on success, negative on failure. + */ + int FL_PacketTable::GetPackets(unsigned int startIndex, unsigned int endIndex, void * data) + { + // Make sure the range of indexes is valid + if (startIndex > endIndex) + return -1; + + return H5PTread_packets(table_id, startIndex, endIndex-startIndex+1, data); + } + + /* GetNextPacket (single packet) + * Gets the next record in the packet table. Takes a pointer to + * memory where the record should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced to the next record on failure. + */ + int FL_PacketTable::GetNextPacket(void * data) + { + return H5PTget_next(table_id, 1, data); + } + + /* GetNextPackets (multiple packets) + * Gets the next numRecords records in the packet table. Takes a + * pointer to memory where these records should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced on failure. + */ + int FL_PacketTable::GetNextPackets(unsigned int numRecords, void * data) + { + return H5PTget_next(table_id, numRecords, data); + } + + + /********************************/ + /* Variable-Length Packet Table */ + /********************************/ + + /* Constructor + * Creates a packet table in which to store variable length records. + * Takes the ID of the file the packet table will be created in, the name of + * the packet table, and the size of a memory chunk used in chunking. + */ + VL_PacketTable::VL_PacketTable(hid_t fileID, char* name, int chunkSize) + { + table_id = H5PTcreate_vl ( fileID, name, chunkSize); + } + + /* "Open" Constructor + * Opens an existing variable-length packet table. + * Fails if the packet table specified is fixed-length. + */ + VL_PacketTable::VL_PacketTable(hid_t fileID, char* name) : PacketTable(fileID, name) + { + if( H5PTis_varlen(table_id) != 1 ) // If this is not a variable-length table + { + H5PTclose(table_id); + table_id = NULL; + } + } + + /* AppendPacket (variable-length) + * Adds a single variable-length packet to the packet table. + * Takes a pointer to the location of the data in memory and the length of the data + * in bytes. + * Returns 0 on success, negative on failure. + */ + int VL_PacketTable::AppendPacket(void * data, unsigned int length) + { + hvl_t packet; + + packet.len = length; + packet.p = data; + + return H5PTappend(table_id, 1, &packet); + } + + /* AppendPackets (multiple packets) + * Adds multiple variable-length records to the packet table. Takes the number of + * records to be added and a pointer to an array of hvl_t structs in memory. + * Returns 0 on success, negative on failure. + */ + int VL_PacketTable::AppendPackets(unsigned int numRecords, hvl_t * data) + { + return H5PTappend(table_id, numRecords, data); + } + + /* GetPacket (indexed) + * Gets a single variable-length record from the packet table. Takes the index + * of the record (with 0 being the first record) and a pointer + * to a hvl_t struct in which to store the record's size and location. + * Returns 0 on success, negative on failure. + */ + int VL_PacketTable::GetPacket(unsigned int index, hvl_t * data) + { + return H5PTread_packets(table_id, index, 1, data); + } + + /* GetPackets (multiple packets) + * Gets multiple variable-length records at once, all records between + * startIndex and endIndex inclusive. Takes a pointer to an array + * of hvl_t structs in memory in which to store pointers to the records. + * Returns 0 on success, negative on failure. + */ + int VL_PacketTable::GetPackets(unsigned int startIndex, unsigned int endIndex, hvl_t * data) + { + // Make sure the range of indexes is valid + if (startIndex > endIndex) + return -1; + + return H5PTread_packets(table_id, startIndex, endIndex-startIndex+1, data); + } + + /* GetNextPacket (single packet) + * Gets the next record in the packet table. Takes a pointer to + * an hvl_t struct where the record should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced to the next record on failure. + */ + int VL_PacketTable::GetNextPacket(hvl_t * data) + { + return H5PTget_next(table_id, 1, data); + } + + /* GetNextPackets (multiple packets) + * Gets the next numRecords records in the packet table. Takes a + * pointer to an array of hvl_t structs where pointers to the records + * should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced on failure. + */ + int VL_PacketTable::GetNextPackets(unsigned int numRecords, hvl_t * data) + { + return H5PTget_next(table_id, numRecords, data); + } + + /* FreeReadbuff + * Frees the buffers created when variable-length records are read. + * Takes the number of hvl_t structs to be freed and a pointer to their location + * in memory. + * Returns 0 on success, negative on error. + */ + int VL_PacketTable::FreeReadbuff(unsigned int numStructs, hvl_t * buffer) + { + return H5PTfree_vlen_readbuff( table_id, numStructs, buffer); + } diff --git a/hl/c++/src/H5PacketTable.h b/hl/c++/src/H5PacketTable.h new file mode 100644 index 0000000..559656c --- /dev/null +++ b/hl/c++/src/H5PacketTable.h @@ -0,0 +1,212 @@ +/* Packet Table wrapper classes + * + * Wraps the H5PT Packet Table C functions in C++ objects + * + * Nat Furrer and James Laird + * February 2004 + */ + +#ifndef H5PTWRAP_H +#define H5PTWRAP_H + +#include "H5PT.h" + +class PacketTable +{ +public: + /* Null constructor + * Sets table_id to "invalid" + */ + PacketTable() {table_id = H5I_BADID;} + + /* "Open" Constructor + * Opens an existing packet table, which can contain either fixed-length or + * variable-length records. + */ + PacketTable(hid_t fileID, char* name); + + /* Destructor + * Cleans up the packet table + */ + ~PacketTable(); + + /* IsValid + * Returns true if this packet table is valid, false otherwise. + * Use this after the constructor to ensure HDF did not have + * any trouble making or opening the packet table. + */ + bool IsValid(); + + /* IsVariableLength + * Return 1 if this packet table is a Variable Length packet table, + * return 0 if it is Fixed Length. Returns -1 if the table is + * invalid (not open). + */ + int IsVariableLength(); + + /* ResetIndex + * Sets the "current record" to the first record in the packet table + */ + void ResetIndex(); + + /* SetIndex + * Sets the current record to point to the record specified by index. + * Returns 0 on success, negative on failure (if index is out of bounds) + */ + int SetIndex(unsigned int index); + + /* GetPacketCount + * Returns the number of records in the packet table. Error + * is set to 0 on success. On failure, returns 0 and + * error is set to negative. + */ + unsigned int GetPacketCount(int& error); + + unsigned int GetPacketCount() + { + int ignoreError; + return GetPacketCount(ignoreError); + } + +protected: + hid_t table_id; +}; + +class FL_PacketTable : virtual public PacketTable +{ +public: + /* Constructor + * Creates a packet table in which to store fixed length records. + * Takes the ID of the file the packet table will be created in, the name of + * the packet table, the ID of the datatype of the set, and the size + * of a memory chunk used in chunking. + */ + FL_PacketTable(hid_t fileID, char* name, hid_t dtypeID, int chunkSize); + + /* "Open" Constructor + * Opens an existing fixed-length packet table. + * Fails if the packet table specified is variable-length. + */ + FL_PacketTable(hid_t fileID, char* name); + + /* AppendPacket + * Adds a single packet to the packet table. Takes a pointer + * to the location of the data in memory. + * Returns 0 on success, negative on failure + */ + int AppendPacket(void * data); + + /* AppendPackets (multiple records) + * Adds multiple records to the packet table. Takes the number of records to be + * added and a pointer to their location in memory. + * Returns 0 on success, -1 on failure. + */ + int AppendPackets(unsigned int numRecords, void * data); + + /* GetPacket (indexed) + * Gets a single packet from the packet table. Takes the index + * of the record (with 0 being the first record) and a pointer + * to memory where the data should be stored. + * Returns 0 on success, negative on failure + */ + int GetPacket(unsigned int index, void * data); + + /* GetPackets (multiple records) + * Gets multiple packets at once, all records between + * startIndex and endIndex inclusive. Also takes a pointer to + * the memory where these records should be stored. + * Returns 0 on success, negative on failure. + */ + int GetPackets(unsigned int startIndex, unsigned int endIndex, void * data); + + /* GetNextPacket (single record) + * Gets the next record in the packet table. Takes a pointer to + * memory where the record should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced to the next record on failure. + */ + int GetNextPacket(void * data); + + /* GetNextPackets (multiple records) + * Gets the next numRecords records in the packet table. Takes a + * pointer to memory where these records should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced on failure. + */ + int GetNextPackets(unsigned int numRecords, void * data); +}; + +class VL_PacketTable : virtual public PacketTable +{ +public: + /* Constructor + * Creates a packet table in which to store variable length records. + * Takes the ID of the file the packet table will be created in, the name of + * the packet table, and the size of a memory chunk used in chunking. + */ + VL_PacketTable(hid_t fileID, char* name, int chunkSize); + + /* "Open" Constructor + * Opens an existing variable-length packet table. + * Fails if the packet table specified is fixed-length. + */ + VL_PacketTable(hid_t fileID, char* name); + + /* AppendPacket + * Adds a single packet of any length to the packet table. + * Takes a pointer to the location of the data in memory and the length of the data + * in bytes. + * Returns 0 on success, negative on failure. + */ + int AppendPacket(void * data, unsigned int length); + + /* AppendPackets (multiple records) + * Adds multiple variable-length records to the packet table. Takes the number of + * records to be added and a pointer to an array of hvl_t structs in memory. + * Returns 0 on success, negative on failure. + */ + int AppendPackets(unsigned int numRecords, hvl_t * data); + + /* GetPacket (indexed) + * Gets a single variable-length record from the packet table. Takes the index + * of the record (with 0 being the first record) and a pointer + * to a hvl_t struct in which to store the record's size and location. + * Returns 0 on success, negative on failure. + */ + int GetPacket(unsigned int index, hvl_t * data); + + /* GetPackets (multiple records) + * Gets multiple variable-length records at once, all records between + * startIndex and endIndex inclusive. Takes a pointer to an array + * of hvl_t structs in memory in which to store pointers to the records. + * Returns 0 on success, negative on failure. + */ + int GetPackets(unsigned int startIndex, unsigned int endIndex, hvl_t * data); + + /* GetNextPacket (single record) + * Gets the next record in the packet table. Takes a pointer to + * an hvl_t struct where the record should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced to the next record on failure. + */ + int GetNextPacket(hvl_t * data); + + /* GetNextPackets (multiple records) + * Gets the next numRecords records in the packet table. Takes a + * pointer to an array of hvl_t structs where pointers to the records + * should be stored. + * Returns 0 on success, negative on failure. Current record + * is not advanced on failure. + */ + int GetNextPackets(unsigned int numRecords, hvl_t * data); + + /* FreeReadbuff + * Frees the buffers created when variable-length records are read. + * Takes the number of hvl_t structs to be freed and a pointer to their location + * in memory. + * Returns 0 on success, negative on error. + */ + int FreeReadbuff(unsigned int numStructs, hvl_t * buffer); +}; + +#endif /* H5PTWRAP_H */ diff --git a/hl/c++/src/Makefile.am b/hl/c++/src/Makefile.am new file mode 100644 index 0000000..9e44c23 --- /dev/null +++ b/hl/c++/src/Makefile.am @@ -0,0 +1,40 @@ +# +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the files COPYING and Copyright.html. COPYING can be found at the root +# of the source code distribution tree; Copyright.html can be found at the +# root level of an installed copy of the electronic HDF5 document set and +# is linked from the top-level documents page. It can also be found at +# http://hdf.ncsa.uiuc.edu/HDF5/doc/Copyright.html. If you do not have +# access to either file, you may request a copy from hdfhelp@ncsa.uiuc.edu. +## +## Makefile.am +## Run automake to generate a Makefile.in from this file. +# +# HDF5-C++ Makefile(.in) +# + +include $(top_srcdir)/config/commence.am + +# Include src directory +INCLUDES=-I$(top_srcdir)/src -I$(top_srcdir)/hl/src + +# Build the library statically because some compliers can only link one +# dynamic library, and that's the main hdf5 library (which is much larger +# than this one). +AM_LDFLAGS=-static + +# This is our main target +lib_LTLIBRARIES=libhdf5_hl_cpp.la + +# Source files for the library +# At the moment, only the H5PT Packet Table has a C++ API. +libhdf5_hl_cpp_la_SOURCES=H5PacketTable.cpp + +# Public headers +include_HEADERS=H5PacketTable.h + +include $(top_srcdir)/config/conclude.am diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in new file mode 100644 index 0000000..23df74a --- /dev/null +++ b/hl/c++/src/Makefile.in @@ -0,0 +1,739 @@ +# Makefile.in generated by automake 1.9.5 from Makefile.am. +# @configure_input@ + +# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002, +# 2003, 2004, 2005 Free Software Foundation, Inc. +# This Makefile.in is free software; the Free Software Foundation +# gives unlimited permission to copy and/or distribute it, +# with or without modifications, as long as this notice is preserved. + +# This program is distributed in the hope that it will be useful, +# but WITHOUT ANY WARRANTY, to the extent permitted by law; without +# even the implied warranty of MERCHANTABILITY or FITNESS FOR A +# PARTICULAR PURPOSE. + +@SET_MAKE@ + +# +# Copyright by the Board of Trustees of the University of Illinois. +# All rights reserved. +# +# This file is part of HDF5. 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\ + for d in X $(SUBDIRS); do \ + if test $$d != X -a $$d != .; then \ + (set -x; cd $$d && $(MAKE) $(AM_MAKEFLAGS) $@) || exit 1; \ + fi; \ + done + +# Tell Automake to build tests when the user types `make all' (this is +# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since +# Automake won't build them automatically, either. +all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS) + +# make install-doc doesn't do anything outside of doc directory, but +# Makefiles should recognize it. +install-doc uninstall-doc: + @echo "Nothing to be done." + +# Run each test in order, passing $(TEST_FLAGS) to the program. +# Since tests are done in a shell loop, "make -i" does apply inside it. +# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop. +# The timestamps give a rough idea how much time the tests use. +# +# Note that targets in TESTS (defined above) will be built when the user +# types 'make tests' or 'make check', but only programs in TEST_PROG, +# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed. +check-TESTS: test + +test _test: $(PROGS) $(TESTS) + @if test -n "$(TEST_PROG)$(TEST_PROG_PARA)$(TEST_SCRIPT)"; then \ + echo "===Tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \ + fi + @for test in $(TEST_PROG) dummy; do \ + if test $$test != dummy; then \ + echo "============================"; \ + if test "X$(HDF_FORTRAN)" = "Xyes"; then \ + echo "Fortran API: Testing $$test $(TEST_FLAGS)"; \ + elif test "X$(HDF_CXX)" = "Xyes"; then \ + echo "C++ API: Testing $$test $(TEST_FLAGS)"; \ + else \ + echo "Testing $$test $(TEST_FLAGS)"; \ + fi; \ + echo "============================"; \ + srcdir="$(srcdir)" \ + $(RUNTEST) ./$$test $(TEST_FLAGS) || \ + (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \ + break; \ + echo ""; \ + fi; \ + done; \ + test $$test = dummy || false + @if test -n "$(TEST_PROG_PARA)"; then \ + echo "**** Hint ****"; \ + echo "Parallel test files reside in the current directory" \ + "by default."; \ + echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo " HDF5_PARAPREFIX=/PFS/user/me"; \ + echo " export HDF5_PARAPREFIX"; \ + echo " make check"; \ + echo "**** end of Hint ****"; \ + fi + @for test in $(TEST_PROG_PARA) dummy; do \ + if test $$test != dummy; then \ + echo "============================"; \ + if test "X$(HDF_FORTRAN)" = "Xyes"; then \ + echo "Fortran API: Testing $$test $(TEST_FLAGS)"; \ + elif test "X$(HDF_CXX)" = "Xyes"; then \ + echo "C++ API: Testing $$test $(TEST_FLAGS)"; \ + else \ + echo "Testing $$test $(TEST_FLAGS)"; \ + fi; \ + echo "============================"; \ + srcdir="$(srcdir)" \ + $(RUNPARALLEL) ./$$test $(TEST_FLAGS) || \ + (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \ + break; \ + echo ""; \ + fi; \ + done; \ + test $$test = dummy || false + @for test in $(TEST_SCRIPT) dummy; do \ + if test $$test != dummy; then \ + echo "============================"; \ + if test "X$(HDF_FORTRAN)" = "Xyes"; then \ + echo "Fortran API: Testing $$test $(TEST_FLAGS)"; \ + elif test "X$(HDF_CXX)" = "Xyes"; then \ + echo "C++ API: Testing $$test $(TEST_FLAGS)"; \ + else \ + echo "Testing $$test $(TEST_FLAGS)"; \ + fi; \ + echo "============================"; \ + RUNSERIAL="$(RUNSERIAL)" RUNPARALLEL="$(RUNPARALLEL)" \ + srcdir="$(srcdir)" \ + /bin/sh $$test $(TEST_FLAGS) || \ + (test $$HDF5_Make_Ignore && echo "*** Error ignored") || \ + break; \ + echo ""; \ + fi; \ + done; \ + test $$test = dummy || false + @if test -n "$(TEST_PROG)$(TEST_PROG_PARA)$(TEST_SCRIPT)"; then \ + echo "===Tests in `echo ${PWD} | sed -e s:.*/::` ended `date`===";\ + fi + +# Run test with different Virtual File Driver +check-vfd: + @for vfd in $(VFD_LIST) dummy; do \ + if test $$vfd != dummy; then \ + echo "============================"; \ + echo "Testing Virtual File Driver $$vfd"; \ + echo "============================"; \ + HDF5_DRIVER=$$vfd $(MAKE) $(AM_MAKEFLAGS) check; \ + fi; \ + done +# Tell versions [3.59,3.63) of GNU make to not export all variables. +# Otherwise a system limit (for SysV at least) may be exceeded. +.NOEXPORT: diff --git a/hl/c++/test/ptableTest.cpp b/hl/c++/test/ptableTest.cpp new file mode 100644 index 0000000..e82d581 --- /dev/null +++ b/hl/c++/test/ptableTest.cpp @@ -0,0 +1,398 @@ +#include "ptableTest.h" + +/* Main test function */ +int main(void) +{ + herr_t err; + + /* Create new HDF5 file */ + fileID = H5Fcreate("test.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if(fileID <0) + fprintf(stderr, "Couldn't open file.\n"); + else { + + BasicTest(); + + TestCompoundDatatype(); + + TestGetPacket(); + + TestGetNext(); + + TestErrors(); + + SystemTest(); + + VariableLengthTest(); + + /* Terminate access to the file. */ + err = H5Fclose(fileID); + if( err < 0 ) + fprintf(stderr, "Failed to close file.\n"); + } +} + + +void BasicTest() +{ + printf("Basic Test running...\n"); + + herr_t err; + int myRecord; + int count; + int error; + + FL_PacketTable wrapper(fileID, "/basicTest", H5T_NATIVE_INT, 1); + assert(wrapper.IsValid()); + + /* Ensure initial count is zero */ + count = wrapper.GetPacketCount(error); + assert(count == 0); + assert(error == 0); + + myRecord = 1; + + /* add some records test */ + err = wrapper.AppendPacket(&myRecord); + if(err == -1) + printf("AppendHorizontalRecord failed.\n"); + else{ + + myRecord = 2; + + wrapper.AppendPacket(&myRecord); + + /* get number of records test */ + count = wrapper.GetPacketCount(); + + assert(count == 2); + + /* get records test */ + err = wrapper.GetPacket(0, &myRecord); + if(err == -1) + fprintf(stderr, "Error in GetPacket.\n"); + + assert(myRecord == 1); + + err = wrapper.GetPacket(1, &myRecord); + if(err == -1) + fprintf(stderr, "Error in GetPacket.\n"); + + assert(myRecord == 2); +} +} + +void TestCompoundDatatype() +{ +printf("TestCompoundDatatype running...\n"); + + hid_t dtypeID; + int error; + + /* Create compound datatype */ + typedef struct compoundType + { + short a, b, c; + int e; + } compoundType; + + dtypeID = H5Tcreate( H5T_COMPOUND, sizeof(compoundType)); + + H5Tinsert(dtypeID, "abbey", HOFFSET( compoundType, a ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID, "bert", HOFFSET( compoundType, b ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID, "charlie", HOFFSET( compoundType, c ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID, "ebert", HOFFSET( compoundType, e ), H5T_NATIVE_INT); + + /* Create packet table */ + FL_PacketTable wrapper(fileID, "/compoundTest", dtypeID, 1); + + assert(wrapper.IsValid()); + + compoundType first; + first.a = 1; + first.b = first.c = 3; + first.e = 5; + + /* Write packet */ + wrapper.AppendPacket(&first); + + int count = wrapper.GetPacketCount(error); + assert(count == 1); + + first.a = first.b = first.c = 0; + first.e = 0; + + /* Read packet back */ + wrapper.GetPacket(0, &first); + + assert(first.a == 1); + assert(first.e == 5); +} + +void TestGetNext() +{ +printf("TestGetNext running...\n"); + + int error; + + /* Create a dataset */ + FL_PacketTable wrapper(fileID, "/TestGetNext", H5T_NATIVE_INT, 1); + + assert(wrapper.IsValid()); + + int record; + int records[2]; + + /* Append 5 records to the dataset */ + for(record = 1; record < 6; record++) + wrapper.AppendPacket(&record); + + /* Ensure that we can interate through the records and get the right ones */ + for(int i = 1; i < 6; i++) + { + wrapper.GetNextPacket(&record); + assert(record == i); + } + + wrapper.ResetIndex(); + + /* Ensure that we can interate through the records and get the right ones */ + for(int i = 1; i < 6; i++) + { + error = wrapper.GetNextPacket(&record); + assert(record == i); + assert(error == 0); + } + + wrapper.SetIndex(1); + + /* Ensure we can get multiple records with our index pointer */ + wrapper.GetNextPackets(2, records); + assert(records[0] == 2); + assert(records[1] == 3); + + /* Ensure our pointer was updated correctly */ + wrapper.GetNextPacket(&record); + assert(record == 4); +} + +void TestGetPacket() +{ + printf("TestGetPacket running...\n"); + + /* Create a dataset */ + FL_PacketTable wrapper(fileID, "/TestGetPacket", H5T_NATIVE_INT, 1); + + assert(wrapper.IsValid()); + + int record; + + /* Append 5 records to the dataset */ + for(record = 1; record < 6; record++) + wrapper.AppendPacket(&record); + + /* Ensure that the records were written properly */ + wrapper.GetPacket(1, &record); + assert(record == 2); + + /* Ensure that we can retrieve multiple records */ + int theRecs[3] = {0, 0, 0}; + wrapper.GetPackets(1, 3, theRecs); + for(int i = 0; i < 3; i++) + assert(theRecs[i] == i+2); +} + +void TestErrors() +{ + printf("TestErrors running...\n"); + + /* Create a dataset */ + FL_PacketTable wrapper(fileID, "/TestErrors", H5T_NATIVE_INT, 1); + + assert(wrapper.IsValid()); + + int record; + int records[3]; + int error; + + /* Append 4 records to the dataset */ + for(record = 1; record < 5; record++) + wrapper.AppendPacket(&record); + + /* Try to confuse functions with bad indexes */ + error = wrapper.GetPacket(-1, &record); + assert(error == -1); + error = wrapper.GetPacket(4, &record); + assert(error == -1); + error = wrapper.GetPacket(-250, &record); + assert(error == -1); + error = wrapper.GetPacket(3000, &record); + assert(error == -1); + error = wrapper.GetPacket(1, &record); + assert(error == 0); + + error = wrapper.GetPackets(-1, 1, records); + assert(error == -1); + error = wrapper.GetPackets(2, 4, records); + assert(error == -1); + error = wrapper.GetPackets(-60, -62, records); + assert(error == -1); + error = wrapper.GetPackets(10, 12, records); + assert(error == -1); + error = wrapper.GetPackets(0, 2, records); + assert(error == 0); + error = wrapper.GetPackets(2, 0, records); + assert(error == -1); + error = wrapper.GetPackets(1, 1, records); + assert(error == 0); + error = wrapper.GetPackets(1, 3, records); + assert(error == 0); + + wrapper.ResetIndex(); + error = wrapper.SetIndex(-1); + assert(error == -1); + error = wrapper.GetNextPacket(&record); + assert(error == 0); + assert(record == 1); + error = wrapper.SetIndex(20); + assert(error == -1); + error = wrapper.GetNextPacket(&record); + assert(error == 0); + assert(record == 2); + wrapper.SetIndex(3); + error = wrapper.GetNextPacket(&record); + assert(error == 0); + assert(record == 4); + error = wrapper.GetNextPacket(&record); + assert(error == -1); + + wrapper.ResetIndex(); + error = wrapper.GetNextPackets(10, records); + assert(error == -1); + error = wrapper.GetNextPackets(0, records); + assert(error == 0); +} + +void SystemTest() +{ + printf("SystemTest running...\n"); + + hid_t dtypeID1, dtypeID2; + + /* Creating two inter-related datatypes. Create two datasets and put + * one datatype in each. */ + typedef struct compoundType + { + short a, b, c; + int e; + } compoundType; + + dtypeID1 = H5Tcreate( H5T_COMPOUND, sizeof(compoundType)); + + H5Tinsert(dtypeID1, "abbey", HOFFSET( compoundType, a ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID1, "bert", HOFFSET( compoundType, b ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID1, "charlie", HOFFSET( compoundType, c ), H5T_NATIVE_SHORT); + H5Tinsert(dtypeID1, "ebert", HOFFSET( compoundType, e ), H5T_NATIVE_INT); + + typedef struct cType2 + { + char f; + compoundType g; + } cType2; + + dtypeID2 = H5Tcreate ( H5T_COMPOUND, sizeof(cType2)); + + H5Tinsert(dtypeID2, "f", HOFFSET( cType2, f ), H5T_NATIVE_CHAR); + H5Tinsert(dtypeID2, "g", HOFFSET( cType2, g ), dtypeID1); + + cType2 ct2[10]; + ct2[0].f = 'h'; + ct2[0].g.a = 9; + ct2[0].g.b = -13; + ct2[0].g.c = 0; + ct2[0].g.e = 3000; + + /* Create the packet table datasets */ + FL_PacketTable wrapper1(fileID, "/SystemTest1", dtypeID1, 1); + FL_PacketTable wrapper2(fileID, "/SystemTest2", dtypeID2, 1); + + assert(wrapper1.IsValid()); + assert(wrapper2.IsValid()); + + /* Write and read packets, ensure that nothing is unusual */ + wrapper2.AppendPacket(ct2); + + unsigned int count = wrapper1.GetPacketCount(); + assert(count == 0); + + compoundType ct1[10]; + ct1[0].a = 31; + ct1[0].b = 4607; + ct1[0].c = -1002; + ct1[0].e = 3; + + ct2[1].f = 'b'; + ct2[1].g = ct1[0]; + + wrapper1.AppendPacket(ct1); + wrapper2.AppendPacket(&ct2[1]); + + wrapper1.ResetIndex(); + wrapper1.GetNextPacket(&ct1[1]); + wrapper2.GetPacket(1, &ct2[2]); + + assert(ct1[1].b == ct2[2].g.b); +} + +void VariableLengthTest(void) +{ + long test_long; + short test_short; + hvl_t read_buf; + + printf("VariableLengthTest running...\n"); + + /* Create a variable length table */ + VL_PacketTable* test_VLPT = new VL_PacketTable(fileID, "/VariableLengthTest", 1); + + /* Verify that the creation succeeded */ + assert(test_VLPT->IsValid()); + + /* Append some packets */ + test_short = 9; + test_VLPT->AppendPacket(&test_short, sizeof(short)); + test_long = 16; + test_VLPT->AppendPacket(&test_long, sizeof(long)); + + /* Read them back and make sure they are correct */ + test_VLPT->GetNextPackets(1, &read_buf); + + assert(read_buf.len == sizeof(short)); + assert(*(short *)(read_buf.p) == test_short); + + /* Free the memory used by the read */ + test_VLPT->FreeReadbuff(1, &read_buf); + + /* Read the second record */ + test_VLPT->GetNextPackets(1, &read_buf); + + assert(read_buf.len == sizeof(long)); + assert(*(long *)(read_buf.p) == test_long); + + /* Free the memory used by the read */ + test_VLPT->FreeReadbuff(1, &read_buf); + + /* Close the packet table */ + delete test_VLPT; + + /* Reopen the packet table and verify that it is variable length */ + PacketTable * new_pt = new PacketTable(fileID, "/VariableLengthTest"); + + /* Verify that the open succeeded */ + assert(new_pt->IsValid()); + + assert(new_pt->IsVariableLength() == 1); + + /* Close the packet table */ + delete new_pt; +} diff --git a/hl/c++/test/ptableTest.h b/hl/c++/test/ptableTest.h new file mode 100644 index 0000000..387a574 --- /dev/null +++ b/hl/c++/test/ptableTest.h @@ -0,0 +1,39 @@ +/* Test header for Packet Table C++ wrapper API */ +/* These tests are not as thorough as the tests for the C API because + * the C++ API is simply a wrapper. We don't need to test the + * actual Packet Table functionality, just that the C APIs are + * invoked correctly. + */ + +#ifndef PTABLETEST +#define PTABLETEST + +#include "H5PacketTable.h" +#include <assert.h> + +static hid_t fileID; + +/* Test some basic functionality; adding and getting records */ +void BasicTest(void); + +/* Test a compound fixed-length datatype */ +void TestCompoundDatatype(void); + +/* Test the GetNext functions and their indexes */ +void TestGetNext(void); + +/* Ensure that the functions return the correct errors in + * response to invalid indexes */ +void TestErrors(void); + +/* Test getting multiple records at once using GetPacket */ +void TestGetPacket(void); + +/* Create two packet tables at once using compound datatypes. + Test for unusual interactions between multiple packet tables. */ +void SystemTest(void); + +/* Test the variable length dataset functionality */ +void VariableLengthTest(void); + +#endif // PTABLETEST diff --git a/hl/fortran/Makefile.in b/hl/fortran/Makefile.in index 7053afb..18bbbc9 100644 --- a/hl/fortran/Makefile.in +++ b/hl/fortran/Makefile.in @@ -254,6 +254,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in index 677674c..7367f67 100644 --- a/hl/fortran/src/Makefile.in +++ b/hl/fortran/src/Makefile.in @@ -276,6 +276,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples diff --git a/hl/fortran/test/Makefile.in b/hl/fortran/test/Makefile.in index 014b39d..b80f595 100644 --- a/hl/fortran/test/Makefile.in +++ b/hl/fortran/test/Makefile.in @@ -274,6 +274,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in index 060ada9..814633d 100644 --- a/hl/src/Makefile.in +++ b/hl/src/Makefile.in @@ -272,6 +272,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples diff --git a/hl/test/Makefile.in b/hl/test/Makefile.in index f193beb..81347bd 100644 --- a/hl/test/Makefile.in +++ b/hl/test/Makefile.in @@ -284,6 +284,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples diff --git a/hl/tools/gif2h5/Makefile.in b/hl/tools/gif2h5/Makefile.in index 37d0d50..176fdbe 100644 --- a/hl/tools/gif2h5/Makefile.in +++ b/hl/tools/gif2h5/Makefile.in @@ -282,6 +282,7 @@ LIBH5CPP = $(top_builddir)/c++/src/libhdf5_cpp.la LIBH5TOOLS = $(top_builddir)/tools/lib/libh5tools.la LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la +LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la docdir = $(exec_prefix)/doc # Scripts used to build examples |