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-rw-r--r--hl/Makefile.in4
-rw-r--r--hl/c++/Makefile.in4
-rw-r--r--hl/c++/examples/Makefile.in4
-rw-r--r--hl/c++/src/Makefile.in30
-rw-r--r--hl/c++/test/Makefile.in4
-rw-r--r--hl/examples/Makefile.in4
-rw-r--r--hl/fortran/Makefile.in4
-rw-r--r--hl/fortran/examples/Makefile.in4
-rw-r--r--hl/fortran/src/Makefile.am16
-rw-r--r--hl/fortran/src/Makefile.in54
-rw-r--r--hl/fortran/test/Makefile.am12
-rw-r--r--hl/fortran/test/Makefile.in37
-rw-r--r--hl/src/CMakeLists.txt9
-rw-r--r--hl/src/Makefile.in30
-rw-r--r--hl/test/Makefile.in4
-rw-r--r--hl/tools/Makefile.in4
-rw-r--r--hl/tools/gif2h5/Makefile.in4
-rw-r--r--hl/tools/gif2h5/decompress.c2
-rw-r--r--hl/tools/h5watch/CMakeTests.cmake59
-rw-r--r--hl/tools/h5watch/Makefile.in4
-rw-r--r--hl/tools/h5watch/testh5watch.sh.in119
-rw-r--r--hl/tools/testfiles/w-err-cmpd1.err (renamed from hl/tools/testfiles/w-err-cmpd1.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-cmpd2.err (renamed from hl/tools/testfiles/w-err-cmpd2.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-cmpd3.err (renamed from hl/tools/testfiles/w-err-cmpd3.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-cmpd4.err (renamed from hl/tools/testfiles/w-err-cmpd4.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-cmpd5.err1
-rw-r--r--hl/tools/testfiles/w-err-dset-nomax.err (renamed from hl/tools/testfiles/w-err-dset-nomax.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-dset-none.err (renamed from hl/tools/testfiles/w-err-dset-none.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-dset1.err (renamed from hl/tools/testfiles/w-err-dset1.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-dset2.err (renamed from hl/tools/testfiles/w-err-dset2.ddl)1
-rw-r--r--hl/tools/testfiles/w-err-file.err (renamed from hl/tools/testfiles/w-err-file.ddl)0
-rw-r--r--hl/tools/testfiles/w-err-std.ddl (renamed from hl/tools/testfiles/w-err-cmpd5.ddl)0
32 files changed, 245 insertions, 176 deletions
diff --git a/hl/Makefile.in b/hl/Makefile.in
index 11340ff..02bacbc 100644
--- a/hl/Makefile.in
+++ b/hl/Makefile.in
@@ -557,7 +557,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -591,6 +590,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1452,7 +1452,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/c++/Makefile.in b/hl/c++/Makefile.in
index 7a7566c..fdc8f5d 100644
--- a/hl/c++/Makefile.in
+++ b/hl/c++/Makefile.in
@@ -553,7 +553,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -587,6 +586,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1442,7 +1442,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/c++/examples/Makefile.in b/hl/c++/examples/Makefile.in
index ade2766..629ba83 100644
--- a/hl/c++/examples/Makefile.in
+++ b/hl/c++/examples/Makefile.in
@@ -500,7 +500,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -534,6 +533,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1360,7 +1360,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/c++/src/Makefile.in b/hl/c++/src/Makefile.in
index 2fa13f0..cf48b26 100644
--- a/hl/c++/src/Makefile.in
+++ b/hl/c++/src/Makefile.in
@@ -556,7 +556,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -590,6 +589,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -734,29 +734,29 @@ TRACE = perl $(top_srcdir)/bin/trace
# .chklog files are output from those tests.
# *.clog and *.clog2 are from the MPE option.
CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2
-LT_VERS_INTERFACE = 103
+LT_VERS_INTERFACE = 104
LT_VERS_REVISION = 0
-LT_VERS_AGE = 0
-LT_CXX_VERS_INTERFACE = 103
+LT_VERS_AGE = 1
+LT_CXX_VERS_INTERFACE = 104
LT_CXX_VERS_REVISION = 0
-LT_CXX_VERS_AGE = 0
-LT_F_VERS_INTERFACE = 101
-LT_F_VERS_REVISION = 2
-LT_F_VERS_AGE = 1
+LT_CXX_VERS_AGE = 1
+LT_F_VERS_INTERFACE = 102
+LT_F_VERS_REVISION = 0
+LT_F_VERS_AGE = 0
LT_HL_VERS_INTERFACE = 101
-LT_HL_VERS_REVISION = 1
+LT_HL_VERS_REVISION = 2
LT_HL_VERS_AGE = 1
LT_HL_CXX_VERS_INTERFACE = 101
-LT_HL_CXX_VERS_REVISION = 2
+LT_HL_CXX_VERS_REVISION = 3
LT_HL_CXX_VERS_AGE = 1
LT_HL_F_VERS_INTERFACE = 100
-LT_HL_F_VERS_REVISION = 3
+LT_HL_F_VERS_REVISION = 4
LT_HL_F_VERS_AGE = 0
-LT_JAVA_VERS_INTERFACE = 103
+LT_JAVA_VERS_INTERFACE = 104
LT_JAVA_VERS_REVISION = 0
-LT_JAVA_VERS_AGE = 3
+LT_JAVA_VERS_AGE = 4
LT_TOOLS_VERS_INTERFACE = 101
-LT_TOOLS_VERS_REVISION = 1
+LT_TOOLS_VERS_REVISION = 2
LT_TOOLS_VERS_AGE = 1
# This is our main target
@@ -1494,7 +1494,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/c++/test/Makefile.in b/hl/c++/test/Makefile.in
index b443df5..531daab 100644
--- a/hl/c++/test/Makefile.in
+++ b/hl/c++/test/Makefile.in
@@ -553,7 +553,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -587,6 +586,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1419,7 +1419,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/examples/Makefile.in b/hl/examples/Makefile.in
index 9131f46..580e617 100644
--- a/hl/examples/Makefile.in
+++ b/hl/examples/Makefile.in
@@ -500,7 +500,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -534,6 +533,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1399,7 +1399,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/fortran/Makefile.in b/hl/fortran/Makefile.in
index 6c66c03..b3decd8 100644
--- a/hl/fortran/Makefile.in
+++ b/hl/fortran/Makefile.in
@@ -557,7 +557,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -591,6 +590,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1446,7 +1446,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/fortran/examples/Makefile.in b/hl/fortran/examples/Makefile.in
index 045bca1..0f12020 100644
--- a/hl/fortran/examples/Makefile.in
+++ b/hl/fortran/examples/Makefile.in
@@ -506,7 +506,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -540,6 +539,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1377,7 +1377,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/fortran/src/Makefile.am b/hl/fortran/src/Makefile.am
index a495e220..37e074c 100644
--- a/hl/fortran/src/Makefile.am
+++ b/hl/fortran/src/Makefile.am
@@ -50,6 +50,21 @@ libhdf5hl_fortran_la_SOURCES=H5DSfc.c H5LTfc.c H5IMfc.c H5IMcc.c H5TBfc.c \
# HDF5 HL Fortran library depends on HDF5 Library.
libhdf5hl_fortran_la_LIBADD=$(LIBH5_HL) $(LIBH5F)
+# The name of the lib file doesn't follow the same pattern as the other hl lib
+# files, namely libhdf5_hl_*. Add a symlink with the compliant name to the
+# actual lib file.
+install-exec-hook:
+ cd $(DESTDIR)$(libdir) && \
+ if test -f libhdf5hl_fortran.a -a \
+ ! -f libhdf5_hl_fortran.a; then \
+ $(LN_S) libhdf5hl_fortran.a libhdf5_hl_fortran.a; \
+ fi; \
+ if test -f libhdf5hl_fortran.so -a \
+ ! -f libhdf5_hl_fortran.so; then \
+ $(LN_S) libhdf5hl_fortran.so libhdf5_hl_fortran.so; \
+ fi;
+
+
# Fortran module files can have different extensions and different names
# (e.g., different capitalizations) on different platforms. Write rules
# for them explicitly rather than trying to teach automake about them.
@@ -72,6 +87,7 @@ uninstall-local:
set -x; $(RM) $(includedir)/*.$(F9XMODEXT); \
fi; \
fi
+ $(RM) $(DESTDIR)$(libdir)/libhdf5_hl_fortran*
# These are the helper programs we need to build.
noinst_PROGRAMS = H5HL_buildiface
diff --git a/hl/fortran/src/Makefile.in b/hl/fortran/src/Makefile.in
index 1776360..7f8f672 100644
--- a/hl/fortran/src/Makefile.in
+++ b/hl/fortran/src/Makefile.in
@@ -584,7 +584,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -618,6 +617,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -762,29 +762,29 @@ TRACE = perl $(top_srcdir)/bin/trace
# .chklog files are output from those tests.
# *.clog and *.clog2 are from the MPE option.
CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2
-LT_VERS_INTERFACE = 103
+LT_VERS_INTERFACE = 104
LT_VERS_REVISION = 0
-LT_VERS_AGE = 0
-LT_CXX_VERS_INTERFACE = 103
+LT_VERS_AGE = 1
+LT_CXX_VERS_INTERFACE = 104
LT_CXX_VERS_REVISION = 0
-LT_CXX_VERS_AGE = 0
-LT_F_VERS_INTERFACE = 101
-LT_F_VERS_REVISION = 2
-LT_F_VERS_AGE = 1
+LT_CXX_VERS_AGE = 1
+LT_F_VERS_INTERFACE = 102
+LT_F_VERS_REVISION = 0
+LT_F_VERS_AGE = 0
LT_HL_VERS_INTERFACE = 101
-LT_HL_VERS_REVISION = 1
+LT_HL_VERS_REVISION = 2
LT_HL_VERS_AGE = 1
LT_HL_CXX_VERS_INTERFACE = 101
-LT_HL_CXX_VERS_REVISION = 2
+LT_HL_CXX_VERS_REVISION = 3
LT_HL_CXX_VERS_AGE = 1
LT_HL_F_VERS_INTERFACE = 100
-LT_HL_F_VERS_REVISION = 3
+LT_HL_F_VERS_REVISION = 4
LT_HL_F_VERS_AGE = 0
-LT_JAVA_VERS_INTERFACE = 103
+LT_JAVA_VERS_INTERFACE = 104
LT_JAVA_VERS_REVISION = 0
-LT_JAVA_VERS_AGE = 3
+LT_JAVA_VERS_AGE = 4
LT_TOOLS_VERS_INTERFACE = 101
-LT_TOOLS_VERS_REVISION = 1
+LT_TOOLS_VERS_REVISION = 2
LT_TOOLS_VERS_AGE = 1
# Our main target, the high-level fortran library
@@ -1264,7 +1264,8 @@ install-dvi: install-dvi-am
install-dvi-am:
install-exec-am: install-libLTLIBRARIES
-
+ @$(NORMAL_INSTALL)
+ $(MAKE) $(AM_MAKEFLAGS) install-exec-hook
install-html: install-html-am
install-html-am:
@@ -1306,7 +1307,7 @@ ps-am:
uninstall-am: uninstall-libLTLIBRARIES uninstall-local
-.MAKE: check-am install-am install-strip
+.MAKE: check-am install-am install-exec-am install-strip
.PHONY: CTAGS GTAGS TAGS all all-am all-local check check-TESTS \
check-am clean clean-generic clean-libLTLIBRARIES \
@@ -1315,8 +1316,8 @@ uninstall-am: uninstall-libLTLIBRARIES uninstall-local
distclean-libtool distclean-local distclean-tags distdir dvi \
dvi-am html html-am info info-am install install-am \
install-data install-data-am install-data-local install-dvi \
- install-dvi-am install-exec install-exec-am install-html \
- install-html-am install-info install-info-am \
+ install-dvi-am install-exec install-exec-am install-exec-hook \
+ install-html install-html-am install-info install-info-am \
install-libLTLIBRARIES install-man install-pdf install-pdf-am \
install-ps install-ps-am install-strip installcheck \
installcheck-am installdirs maintainer-clean \
@@ -1340,6 +1341,20 @@ uninstall-am: uninstall-libLTLIBRARIES uninstall-local
help:
@$(top_srcdir)/bin/makehelp
+# The name of the lib file doesn't follow the same pattern as the other hl lib
+# files, namely libhdf5_hl_*. Add a symlink with the compliant name to the
+# actual lib file.
+install-exec-hook:
+ cd $(DESTDIR)$(libdir) && \
+ if test -f libhdf5hl_fortran.a -a \
+ ! -f libhdf5_hl_fortran.a; then \
+ $(LN_S) libhdf5hl_fortran.a libhdf5_hl_fortran.a; \
+ fi; \
+ if test -f libhdf5hl_fortran.so -a \
+ ! -f libhdf5_hl_fortran.so; then \
+ $(LN_S) libhdf5hl_fortran.so libhdf5_hl_fortran.so; \
+ fi;
+
# Fortran module files can have different extensions and different names
# (e.g., different capitalizations) on different platforms. Write rules
# for them explicitly rather than trying to teach automake about them.
@@ -1362,6 +1377,7 @@ uninstall-local:
set -x; $(RM) $(includedir)/*.$(F9XMODEXT); \
fi; \
fi
+ $(RM) $(DESTDIR)$(libdir)/libhdf5_hl_fortran*
# H5HL_buildiface.F90 generates all the APIs that have a KIND type associated
# with them.
@@ -1583,7 +1599,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/fortran/test/Makefile.am b/hl/fortran/test/Makefile.am
index ba672aa..0552aaa 100644
--- a/hl/fortran/test/Makefile.am
+++ b/hl/fortran/test/Makefile.am
@@ -58,18 +58,6 @@ clean-local:
$(RM) *.$(F9XMODEXT); \
fi
-install-data-local:
- @if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
- $(CP) $(top_builddir)/$(subdir)/*.$(F9XMODEXT) $(DESTDIR)$(includedir)/. ; \
- fi
-
-uninstall-local:
- @if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then \
- if test -f "$(includedir)/hdf5.$(F9XMODEXT)" -o -f "$(DESTDIR)$(includedir)/HDF5.$(F9XMODEXT)"; then \
- set -x; $(RM) $(includedir)/*.$(F9XMODEXT); \
- fi; \
- fi
-
# Mark this directory as part of the Fortran API (this affects output
# from tests in conclude.am)
FORTRAN_API=yes
diff --git a/hl/fortran/test/Makefile.in b/hl/fortran/test/Makefile.in
index c4719bf..c857de9 100644
--- a/hl/fortran/test/Makefile.in
+++ b/hl/fortran/test/Makefile.in
@@ -573,7 +573,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -607,6 +606,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1185,7 +1185,7 @@ info: info-am
info-am:
-install-data-am: install-data-local
+install-data-am:
install-dvi: install-dvi-am
@@ -1231,7 +1231,7 @@ ps: ps-am
ps-am:
-uninstall-am: uninstall-local
+uninstall-am:
.MAKE: check-am install-am install-strip
@@ -1241,15 +1241,14 @@ uninstall-am: uninstall-local
distclean-compile distclean-generic distclean-libtool \
distclean-local distclean-tags distdir dvi dvi-am html html-am \
info info-am install install-am install-data install-data-am \
- install-data-local install-dvi install-dvi-am install-exec \
- install-exec-am install-html install-html-am install-info \
- install-info-am install-man install-pdf install-pdf-am \
- install-ps install-ps-am install-strip installcheck \
- installcheck-am installdirs maintainer-clean \
- maintainer-clean-generic maintainer-clean-local mostlyclean \
- mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
- mostlyclean-local pdf pdf-am ps ps-am recheck tags tags-am \
- uninstall uninstall-am uninstall-local
+ install-dvi install-dvi-am install-exec install-exec-am \
+ install-html install-html-am install-info install-info-am \
+ install-man install-pdf install-pdf-am install-ps \
+ install-ps-am install-strip installcheck installcheck-am \
+ installdirs maintainer-clean maintainer-clean-generic \
+ maintainer-clean-local mostlyclean mostlyclean-compile \
+ mostlyclean-generic mostlyclean-libtool mostlyclean-local pdf \
+ pdf-am ps ps-am recheck tags tags-am uninstall uninstall-am
.PRECIOUS: Makefile
@@ -1276,18 +1275,6 @@ clean-local:
$(RM) *.$(F9XMODEXT); \
fi
-install-data-local:
- @if test -n "$(F9XMODEXT)" && test "X$(F9XMODEXT)" != "Xo"; then \
- $(CP) $(top_builddir)/$(subdir)/*.$(F9XMODEXT) $(DESTDIR)$(includedir)/. ; \
- fi
-
-uninstall-local:
- @if test -n "$(F9XMODEXT)" -a "X$(F9XMODEXT)" != "Xo"; then \
- if test -f "$(includedir)/hdf5.$(F9XMODEXT)" -o -f "$(DESTDIR)$(includedir)/HDF5.$(F9XMODEXT)"; then \
- set -x; $(RM) $(includedir)/*.$(F9XMODEXT); \
- fi; \
- fi
-
# Treat all .f90 and .F90 files as preprocessed Fortran.
.f90.o:
$(PPFCCOMPILE) -c -o $@ $<
@@ -1490,7 +1477,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/src/CMakeLists.txt b/hl/src/CMakeLists.txt
index e339f11..bf0f6ff 100644
--- a/hl/src/CMakeLists.txt
+++ b/hl/src/CMakeLists.txt
@@ -21,7 +21,6 @@ set (HL_HEADERS
${HDF5_HL_SRC_SOURCE_DIR}/H5DOpublic.h
${HDF5_HL_SRC_SOURCE_DIR}/H5DSpublic.h
${HDF5_HL_SRC_SOURCE_DIR}/H5IMpublic.h
- ${HDF5_HL_SRC_SOURCE_DIR}/H5LTparse.h
${HDF5_HL_SRC_SOURCE_DIR}/H5LTpublic.h
${HDF5_HL_SRC_SOURCE_DIR}/H5PTpublic.h
${HDF5_HL_SRC_SOURCE_DIR}/H5TBpublic.h
@@ -29,7 +28,11 @@ set (HL_HEADERS
${HDF5_HL_SRC_SOURCE_DIR}/hdf5_hl.h
)
-add_library (${HDF5_HL_LIB_TARGET} STATIC ${HL_SOURCES} ${HL_HEADERS})
+set (HL_PRIVATE_HEADERS
+ ${HDF5_HL_SRC_SOURCE_DIR}/H5LTparse.h
+)
+
+add_library (${HDF5_HL_LIB_TARGET} STATIC ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS})
target_include_directories(${HDF5_HL_LIB_TARGET}
PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
@@ -42,7 +45,7 @@ set_global_variable (HDF5_LIBRARIES_TO_EXPORT "${HDF5_LIBRARIES_TO_EXPORT};${HDF
set (install_targets ${HDF5_HL_LIB_TARGET})
if (BUILD_SHARED_LIBS)
- add_library (${HDF5_HL_LIBSH_TARGET} SHARED ${HL_SOURCES} ${HL_HEADERS})
+ add_library (${HDF5_HL_LIBSH_TARGET} SHARED ${HL_SOURCES} ${HL_HEADERS} ${HL_PRIVATE_HEADERS})
target_include_directories(${HDF5_HL_LIBSH_TARGET}
PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>"
INTERFACE "$<INSTALL_INTERFACE:$<INSTALL_PREFIX>/include>"
diff --git a/hl/src/Makefile.in b/hl/src/Makefile.in
index ec70cfb..44c42cc 100644
--- a/hl/src/Makefile.in
+++ b/hl/src/Makefile.in
@@ -555,7 +555,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -589,6 +588,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -733,29 +733,29 @@ TRACE = perl $(top_srcdir)/bin/trace
# .chklog files are output from those tests.
# *.clog and *.clog2 are from the MPE option.
CHECK_CLEANFILES = *.chkexe *.chklog *.clog *.clog2
-LT_VERS_INTERFACE = 103
+LT_VERS_INTERFACE = 104
LT_VERS_REVISION = 0
-LT_VERS_AGE = 0
-LT_CXX_VERS_INTERFACE = 103
+LT_VERS_AGE = 1
+LT_CXX_VERS_INTERFACE = 104
LT_CXX_VERS_REVISION = 0
-LT_CXX_VERS_AGE = 0
-LT_F_VERS_INTERFACE = 101
-LT_F_VERS_REVISION = 2
-LT_F_VERS_AGE = 1
+LT_CXX_VERS_AGE = 1
+LT_F_VERS_INTERFACE = 102
+LT_F_VERS_REVISION = 0
+LT_F_VERS_AGE = 0
LT_HL_VERS_INTERFACE = 101
-LT_HL_VERS_REVISION = 1
+LT_HL_VERS_REVISION = 2
LT_HL_VERS_AGE = 1
LT_HL_CXX_VERS_INTERFACE = 101
-LT_HL_CXX_VERS_REVISION = 2
+LT_HL_CXX_VERS_REVISION = 3
LT_HL_CXX_VERS_AGE = 1
LT_HL_F_VERS_INTERFACE = 100
-LT_HL_F_VERS_REVISION = 3
+LT_HL_F_VERS_REVISION = 4
LT_HL_F_VERS_AGE = 0
-LT_JAVA_VERS_INTERFACE = 103
+LT_JAVA_VERS_INTERFACE = 104
LT_JAVA_VERS_REVISION = 0
-LT_JAVA_VERS_AGE = 3
+LT_JAVA_VERS_AGE = 4
LT_TOOLS_VERS_INTERFACE = 101
-LT_TOOLS_VERS_REVISION = 1
+LT_TOOLS_VERS_REVISION = 2
LT_TOOLS_VERS_AGE = 1
# This library is our main target.
@@ -1500,7 +1500,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/test/Makefile.in b/hl/test/Makefile.in
index 0e615b6..ab221ab 100644
--- a/hl/test/Makefile.in
+++ b/hl/test/Makefile.in
@@ -607,7 +607,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -641,6 +640,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1607,7 +1607,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/tools/Makefile.in b/hl/tools/Makefile.in
index 70c0e26..46c01f6 100644
--- a/hl/tools/Makefile.in
+++ b/hl/tools/Makefile.in
@@ -554,7 +554,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -588,6 +587,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1428,7 +1428,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/tools/gif2h5/Makefile.in b/hl/tools/gif2h5/Makefile.in
index 41c069d..18b4040 100644
--- a/hl/tools/gif2h5/Makefile.in
+++ b/hl/tools/gif2h5/Makefile.in
@@ -568,7 +568,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -602,6 +601,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1502,7 +1502,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/tools/gif2h5/decompress.c b/hl/tools/gif2h5/decompress.c
index 453db12..6668c22 100644
--- a/hl/tools/gif2h5/decompress.c
+++ b/hl/tools/gif2h5/decompress.c
@@ -261,7 +261,7 @@ Decompress(GIFIMAGEDESC *GifImageDesc, GIFHEAD *GifHead)
* chain puts its associated output code on the output queue.
*/
while (CurCode > DataMask) {
- if (OutCount > 1024) {
+ if (OutCount >= 1024) {
/*return error message*/
}
diff --git a/hl/tools/h5watch/CMakeTests.cmake b/hl/tools/h5watch/CMakeTests.cmake
index 0b7b4d4..13d5e47 100644
--- a/hl/tools/h5watch/CMakeTests.cmake
+++ b/hl/tools/h5watch/CMakeTests.cmake
@@ -18,16 +18,16 @@
set (H5WATCH_TEST_FILES
w-help1.ddl
- w-err-cmpd1.ddl
- w-err-cmpd2.ddl
- w-err-cmpd3.ddl
- w-err-cmpd4.ddl
- w-err-cmpd5.ddl
- w-err-dset1.ddl
- w-err-dset2.ddl
- w-err-dset-nomax.ddl
- w-err-dset-none.ddl
- w-err-file.ddl
+ w-err-cmpd1.err
+ w-err-cmpd2.err
+ w-err-cmpd3.err
+ w-err-cmpd4.err
+ w-err-cmpd5.err
+ w-err-dset1.err
+ w-err-dset2.err
+ w-err-dset-nomax.err
+ w-err-dset-none.err
+ w-err-file.err
w-err-poll.ddl
w-err-poll0.ddl
w-err-width.ddl
@@ -86,6 +86,25 @@ add_custom_target(H5WATCH_files ALL COMMENT "Copying files needed by H5WATCH tes
endif ()
endmacro ()
+ macro (ADD_H5_ERR_TEST resultfile resultcode)
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5WATCH_ARGS-h5watch-${resultfile}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5watch>"
+ -D "TEST_ARGS:STRING=${ARGN}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${resultfile}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=${resultfile}.mty"
+ -D "TEST_ERRREF=${resultfile}.err"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ set_tests_properties (H5WATCH_ARGS-h5watch-${resultfile} PROPERTIES DEPENDS ${last_test})
+ set (last_test "H5WATCH_ARGS-h5watch-${resultfile}")
+ endif ()
+ endmacro ()
+
macro (ADD_H5_WATCH resultfile resultcode)
if (NOT HDF5_ENABLE_USING_MEMCHECKER)
add_test (
@@ -162,20 +181,20 @@ if (NOT SWMR_INCOMPAT)
ADD_H5_TEST (w-help1 0 --help)
#
# Tests on expected failures
- ADD_H5_TEST (w-err-dset1 1 WATCH.h5)
- ADD_H5_TEST (w-err-dset2 1 WATCH.h5/group/DSET_CMPD)
- ADD_H5_TEST (w-err-dset-none 1 WATCH.h5/DSET_NONE)
- ADD_H5_TEST (w-err-dset-nomax 1 WATCH.h5/DSET_NOMAX)
- ADD_H5_TEST (w-err-file 1 ../WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-dset1 1 WATCH.h5)
+ ADD_H5_ERR_TEST (w-err-dset2 1 WATCH.h5/group/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-dset-none 1 WATCH.h5/DSET_NONE)
+ ADD_H5_ERR_TEST (w-err-dset-nomax 1 WATCH.h5/DSET_NOMAX)
+ ADD_H5_ERR_TEST (w-err-file 1 ../WATCH.h5/DSET_CMPD)
ADD_H5_TEST (w-err-width 1 --width=-8 WATCH.h5/DSET_ONE)
ADD_H5_TEST (w-err-poll 1 --polling=-8 WATCH.h5/DSET_ONE)
ADD_H5_TEST (w-err-poll0 1 --polling=0 WATCH.h5/DSET_ONE)
#
# Tests on invalid field names via --fields option for a compound typed dataset: DSET_CMPD
- ADD_H5_TEST (w-err-cmpd1 1 --fields=fieldx WATCH.h5/DSET_CMPD)
- ADD_H5_TEST (w-err-cmpd2 1 --fields=field1,field2. WATCH.h5/DSET_CMPD)
- ADD_H5_TEST (w-err-cmpd3 1 --fields=field1,field2, WATCH.h5/DSET_CMPD)
- ADD_H5_TEST (w-err-cmpd4 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD)
- ADD_H5_TEST (w-err-cmpd5 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-cmpd1 1 --fields=fieldx WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-cmpd2 1 --fields=field1,field2. WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-cmpd3 1 --fields=field1,field2, WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-cmpd4 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD)
+ ADD_H5_ERR_TEST (w-err-cmpd5 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD)
#
endif ()
diff --git a/hl/tools/h5watch/Makefile.in b/hl/tools/h5watch/Makefile.in
index dc7a7c0..ffc0277 100644
--- a/hl/tools/h5watch/Makefile.in
+++ b/hl/tools/h5watch/Makefile.in
@@ -571,7 +571,6 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
-METADATATRACEFILE = @METADATATRACEFILE@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -605,6 +604,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@
PARALLEL = @PARALLEL@
PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@
PATH_SEPARATOR = @PATH_SEPARATOR@
+PREADWRITE = @PREADWRITE@
PROFILING = @PROFILING@
RANLIB = @RANLIB@
ROOT = @ROOT@
@@ -1527,7 +1527,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
echo "**** Hint ****"; \
echo "Parallel test files reside in the current directory" \
"by default."; \
- echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \
+ echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \
echo " HDF5_PARAPREFIX=/PFS/user/me"; \
echo " export HDF5_PARAPREFIX"; \
echo " make check"; \
diff --git a/hl/tools/h5watch/testh5watch.sh.in b/hl/tools/h5watch/testh5watch.sh.in
index 3f8f5ae..d31bcc3 100644
--- a/hl/tools/h5watch/testh5watch.sh.in
+++ b/hl/tools/h5watch/testh5watch.sh.in
@@ -32,19 +32,19 @@ fi
#echo
#exit 0
-H5WATCH=h5watch # The tool name
-H5WATCH_BIN=`pwd`/$H5WATCH # The path of H5WATCH
-EXTEND_DSET=extend_dset # Routine to extend the dataset when watching
-EXTEND_BIN=`pwd`/$EXTEND_DSET # The path of EXTEND_DSET
+H5WATCH=h5watch # The tool name
+H5WATCH_BIN=`pwd`/$H5WATCH # The path of H5WATCH
+EXTEND_DSET=extend_dset # Routine to extend the dataset when watching
+EXTEND_BIN=`pwd`/$EXTEND_DSET # The path of EXTEND_DSET
#
EXIT_SUCCESS=0
EXIT_FAILURE=1
#
-GEN_TEST=h5watchgentest # Generate HDF5 file with various datasets
-GEN_TEST_BIN=`pwd`/$GEN_TEST # Path of the binary GEN_TEST
+GEN_TEST=h5watchgentest # Generate HDF5 file with various datasets
+GEN_TEST_BIN=`pwd`/$GEN_TEST # Path of the binary GEN_TEST
WATCHFILE=`pwd`/WATCH.h5 # The HDF5 file generated to test h5watch
TESTFILE=TEST.h5 # The temporary file (a copy of WATCH.h5) used by tests
-TRY_MAX=30 # Try running the test again
+TRY_MAX=30 # Try running the test again
#
# These 3 defines should be the same as the defines in ./extend_dset.c
WRITER_MESSAGE=writer_message # The message file created by the "extend" process
@@ -53,7 +53,7 @@ MESSAGE_TIMEOUT=300 # Message timeout length in secs
#
CMP='cmp -s'
DIFF='diff -c'
-NLINES=20 # Max. lines of output to display if test fails
+NLINES=20 # Max. lines of output to display if test fails
#
# Mac OS: just to make sure echo "backslash backslash" behaves properly
if test `uname -s` = 'Darwin'; then
@@ -83,9 +83,9 @@ TESTING() {
# Overall algorithm:
#
# Run a test and print PASSED or FAILED
-# If a test did not return with the expected return code,
+# If a test did not return with the expected return code,
# increment the `nerrors' global variable and (if $verbose is set) display up to $NLINES
-# lines of the actual output from the test.
+# lines of the actual output from the test.
# If the test did return the expected code,
# compare the actual output with the expected output;
# If the outputs are the same, print PASSED,
@@ -137,7 +137,54 @@ TOOLTEST() {
# Clean up output file
if test -z "$HDF5_NOCLEANUP"; then
- rm -f $actual $actual_err
+ rm -f $actual $actual_err
+ fi
+}
+#
+# TOOLTEST_ERR():
+# same as toolset only compare error file
+#
+# Arguments:
+#
+# $1 -- expected output
+# $2 -- expected return code
+# $3 and on -- arguments for h5watch
+TOOLTEST_ERR() {
+ expect="$srcdir/../testfiles/$1"
+ expect_err="$srcdir/../testfiles/`basename $1 .ddl`.err"
+ actual="../testfiles/`basename $1 .ddl`.out"
+ actual_err="../testfiles/`basename $1 .ddl`.out.err"
+ shift
+ retvalexpect=$1
+ shift
+ # Run test.
+ TESTING $H5WATCH $@
+ (
+ $RUNSERIAL $H5WATCH_BIN "$@"
+ ) > $actual 2>$actual_err
+ exitcode=$?
+ if [ $exitcode -ne $retvalexpect ]; then
+ $ECHO "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ if [ yes = "$verbose" ]; then
+ $ECHO "test returned with exit code $exitcode"
+ $ECHO "test output: (up to $NLINES lines)"
+ head -$NLINES $actual
+ $ECHO "***end of test output***"
+ $ECHO ""
+ fi
+ elif $CMP $expect_err $actual_err; then
+ $ECHO " PASSED"
+ else
+ $ECHO "*FAILED*"
+ $ECHO " Expected result differs from actual result"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /'
+ fi
+
+ # Clean up output file
+ if test -z "$HDF5_NOCLEANUP"; then
+ rm -f $actual $actual_err
fi
}
@@ -176,15 +223,15 @@ do
# Wait for message from "extend_dset" process to start h5watch--
# To wait for the writer message file or till the maximum # of seconds is reached
# This performs similar function as the routine h5_wait_message() in test/h5test.c
- mexist=0 # Indicate whether the message file is found
- t0=`date +%s` # Get current time in seconds
- difft=0 # Initialize the time difference
- while [ $difft -lt $MESSAGE_TIMEOUT ] ; # Loop till message times out
+ mexist=0 # Indicate whether the message file is found
+ t0=`date +%s` # Get current time in seconds
+ difft=0 # Initialize the time difference
+ while [ $difft -lt $MESSAGE_TIMEOUT ] ; # Loop till message times out
do
- t1=`date +%s` # Get current time in seconds
- difft=`expr $t1 - $t0` # Calculate the time difference
+ t1=`date +%s` # Get current time in seconds
+ difft=`expr $t1 - $t0` # Calculate the time difference
if [ -e $WRITER_MESSAGE ]; then # If message file is found:
- mexist=1 # indicate the message file is found
+ mexist=1 # indicate the message file is found
rm $WRITER_MESSAGE # remove the message file
break # get out of the while loop
fi
@@ -211,8 +258,8 @@ do
wait $extend_pid # Wait for "extend" process to complete
extend_exit=$? # Collect "extend" process' exit code
sleep 1 # Sleep to make sure output is flushed
- kill $watch_pid # Kill h5watch
- wait $watch_pid # Wait for "h5watch" process to complete
+ kill $watch_pid # Kill h5watch
+ wait $watch_pid # Wait for "h5watch" process to complete
#
if [ $extend_exit -ne 0 ]; then # Error returned from "extend" process
$ECHO "*FAILED*"
@@ -265,7 +312,7 @@ done;
# DSET_ONE: one-dimensional dataset #
# DSET_TWO: two-dimensional dataset #
# DSET_CMPD: one-dimensional dataset with compound type #
-# DSET_CMPD_ESC: one-dimensional dataset with compound type & escape/separator characters #
+# DSET_CMPD_ESC: one-dimensional dataset with compound type & escape/separator characters #
# DSET_CMPD_TWO: two-dimensional dataset with compound type #
# #
# The following datasets are one-dimensional, chunked, max. dimension setting: #
@@ -282,11 +329,11 @@ done;
#################################################################################################
# #
# Tests on expected failures: #
-# Invalid file name #
-# Unable to find dataset, invalid dataset #
-# DSET_NONE and DSET_NOMAX #
-# Invalid input to options --width and --polling #
-# Invalid field names for -f option #
+# Invalid file name #
+# Unable to find dataset, invalid dataset #
+# DSET_NONE and DSET_NOMAX #
+# Invalid input to options --width and --polling #
+# Invalid field names for -f option #
# #
#################################################################################################
#
@@ -296,21 +343,21 @@ $GEN_TEST_BIN
TOOLTEST w-help1.ddl 0 --help
#
# Tests on expected failures
-TOOLTEST w-err-dset1.ddl 1 WATCH.h5
-TOOLTEST w-err-dset2.ddl 1 WATCH.h5/group/DSET_CMPD
-TOOLTEST w-err-dset-none.ddl 1 WATCH.h5/DSET_NONE
-TOOLTEST w-err-dset-nomax.ddl 1 WATCH.h5/DSET_NOMAX
-TOOLTEST w-err-file.ddl 1 ../WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-dset1.ddl 1 WATCH.h5
+TOOLTEST_ERR w-err-dset2.ddl 1 WATCH.h5/group/DSET_CMPD
+TOOLTEST_ERR w-err-dset-none.ddl 1 WATCH.h5/DSET_NONE
+TOOLTEST_ERR w-err-dset-nomax.ddl 1 WATCH.h5/DSET_NOMAX
+TOOLTEST_ERR w-err-file.ddl 1 ../WATCH.h5/DSET_CMPD
TOOLTEST w-err-width.ddl 1 --width=-8 WATCH.h5/DSET_ONE
TOOLTEST w-err-poll.ddl 1 --polling=-8 WATCH.h5/DSET_ONE
TOOLTEST w-err-poll0.ddl 1 --polling=0 WATCH.h5/DSET_ONE
#
# Tests on invalid field names via --fields option for a compound typed dataset: DSET_CMPD
-TOOLTEST w-err-cmpd1.ddl 1 --fields=fieldx WATCH.h5/DSET_CMPD
-TOOLTEST w-err-cmpd2.ddl 1 --fields=field1,field2. WATCH.h5/DSET_CMPD
-TOOLTEST w-err-cmpd3.ddl 1 --fields=field1,field2, WATCH.h5/DSET_CMPD
-TOOLTEST w-err-cmpd4.ddl 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD
-TOOLTEST w-err-cmpd5.ddl 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-cmpd1.ddl 1 --fields=fieldx WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-cmpd2.ddl 1 --fields=field1,field2. WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-cmpd3.ddl 1 --fields=field1,field2, WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-cmpd4.ddl 1 --fields=field1,field2.b.k WATCH.h5/DSET_CMPD
+TOOLTEST_ERR w-err-cmpd5.ddl 1 --fields=field1 --fields=field2.b.k WATCH.h5/DSET_CMPD
#
echo "DONE WITH 1st SET OF TESTS"
#
diff --git a/hl/tools/testfiles/w-err-cmpd1.ddl b/hl/tools/testfiles/w-err-cmpd1.err
index 775d6a0..9c165fb 100644
--- a/hl/tools/testfiles/w-err-cmpd1.ddl
+++ b/hl/tools/testfiles/w-err-cmpd1.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: error in processing <list_of_fields>
diff --git a/hl/tools/testfiles/w-err-cmpd2.ddl b/hl/tools/testfiles/w-err-cmpd2.err
index 775d6a0..9c165fb 100644
--- a/hl/tools/testfiles/w-err-cmpd2.ddl
+++ b/hl/tools/testfiles/w-err-cmpd2.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: error in processing <list_of_fields>
diff --git a/hl/tools/testfiles/w-err-cmpd3.ddl b/hl/tools/testfiles/w-err-cmpd3.err
index 775d6a0..9c165fb 100644
--- a/hl/tools/testfiles/w-err-cmpd3.ddl
+++ b/hl/tools/testfiles/w-err-cmpd3.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: error in processing <list_of_fields>
diff --git a/hl/tools/testfiles/w-err-cmpd4.ddl b/hl/tools/testfiles/w-err-cmpd4.err
index 775d6a0..9c165fb 100644
--- a/hl/tools/testfiles/w-err-cmpd4.ddl
+++ b/hl/tools/testfiles/w-err-cmpd4.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: error in processing <list_of_fields>
diff --git a/hl/tools/testfiles/w-err-cmpd5.err b/hl/tools/testfiles/w-err-cmpd5.err
new file mode 100644
index 0000000..9c165fb
--- /dev/null
+++ b/hl/tools/testfiles/w-err-cmpd5.err
@@ -0,0 +1 @@
+h5watch error: error in processing <list_of_fields>
diff --git a/hl/tools/testfiles/w-err-dset-nomax.ddl b/hl/tools/testfiles/w-err-dset-nomax.err
index b99cf84..fd5ca7e 100644
--- a/hl/tools/testfiles/w-err-dset-nomax.ddl
+++ b/hl/tools/testfiles/w-err-dset-nomax.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: "/DSET_NOMAX" should have unlimited or max. dimension setting
diff --git a/hl/tools/testfiles/w-err-dset-none.ddl b/hl/tools/testfiles/w-err-dset-none.err
index cbf6770..db781c3 100644
--- a/hl/tools/testfiles/w-err-dset-none.ddl
+++ b/hl/tools/testfiles/w-err-dset-none.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: "/DSET_NONE" should be a chunked or virtual dataset
diff --git a/hl/tools/testfiles/w-err-dset1.ddl b/hl/tools/testfiles/w-err-dset1.err
index 433c4d6..d6b2a6e 100644
--- a/hl/tools/testfiles/w-err-dset1.ddl
+++ b/hl/tools/testfiles/w-err-dset1.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: no dataset specified
diff --git a/hl/tools/testfiles/w-err-dset2.ddl b/hl/tools/testfiles/w-err-dset2.err
index 81b52de..3f77ec8 100644
--- a/hl/tools/testfiles/w-err-dset2.ddl
+++ b/hl/tools/testfiles/w-err-dset2.err
@@ -1,2 +1 @@
-Opened "WATCH.h5" with sec2 driver.
h5watch error: unable to open dataset "/group/DSET_CMPD"
diff --git a/hl/tools/testfiles/w-err-file.ddl b/hl/tools/testfiles/w-err-file.err
index 015661f..015661f 100644
--- a/hl/tools/testfiles/w-err-file.ddl
+++ b/hl/tools/testfiles/w-err-file.err
diff --git a/hl/tools/testfiles/w-err-cmpd5.ddl b/hl/tools/testfiles/w-err-std.ddl
index 775d6a0..775d6a0 100644
--- a/hl/tools/testfiles/w-err-cmpd5.ddl
+++ b/hl/tools/testfiles/w-err-std.ddl
generated by cgit v0.12 at 2024-07-07 22:17:27 (GMT)