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-rw-r--r--java/examples/datasets/H5Ex_D_Soint.java110
1 files changed, 57 insertions, 53 deletions
diff --git a/java/examples/datasets/H5Ex_D_Soint.java b/java/examples/datasets/H5Ex_D_Soint.java
index dd7664f..3eb8e37 100644
--- a/java/examples/datasets/H5Ex_D_Soint.java
+++ b/java/examples/datasets/H5Ex_D_Soint.java
@@ -30,45 +30,46 @@ import hdf.hdf5lib.HDF5Constants;
public class H5Ex_D_Soint {
- private static String FILENAME = "H5Ex_D_Soint.h5";
+ private static String FILENAME = "H5Ex_D_Soint.h5";
private static String DATASETNAME = "DS1";
- private static final int DIM_X = 32;
- private static final int DIM_Y = 64;
- private static final int CHUNK_X = 4;
- private static final int CHUNK_Y = 8;
- private static final int RANK = 2;
- private static final int NDIMS = 2;
+ private static final int DIM_X = 32;
+ private static final int DIM_Y = 64;
+ private static final int CHUNK_X = 4;
+ private static final int CHUNK_Y = 8;
+ private static final int RANK = 2;
+ private static final int NDIMS = 2;
// Values for the status of space allocation
enum H5Z_filter {
- H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR), H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE), H5Z_FILTER_DEFLATE(
- HDF5Constants.H5Z_FILTER_DEFLATE), H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE), H5Z_FILTER_FLETCHER32(
- HDF5Constants.H5Z_FILTER_FLETCHER32), H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP), H5Z_FILTER_NBIT(
- HDF5Constants.H5Z_FILTER_NBIT), H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET), H5Z_FILTER_RESERVED(
- HDF5Constants.H5Z_FILTER_RESERVED), H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX);
+ H5Z_FILTER_ERROR(HDF5Constants.H5Z_FILTER_ERROR),
+ H5Z_FILTER_NONE(HDF5Constants.H5Z_FILTER_NONE),
+ H5Z_FILTER_DEFLATE(HDF5Constants.H5Z_FILTER_DEFLATE),
+ H5Z_FILTER_SHUFFLE(HDF5Constants.H5Z_FILTER_SHUFFLE),
+ H5Z_FILTER_FLETCHER32(HDF5Constants.H5Z_FILTER_FLETCHER32),
+ H5Z_FILTER_SZIP(HDF5Constants.H5Z_FILTER_SZIP),
+ H5Z_FILTER_NBIT(HDF5Constants.H5Z_FILTER_NBIT),
+ H5Z_FILTER_SCALEOFFSET(HDF5Constants.H5Z_FILTER_SCALEOFFSET),
+ H5Z_FILTER_RESERVED(HDF5Constants.H5Z_FILTER_RESERVED),
+ H5Z_FILTER_MAX(HDF5Constants.H5Z_FILTER_MAX);
private static final Map<Integer, H5Z_filter> lookup = new HashMap<Integer, H5Z_filter>();
- static {
+ static
+ {
for (H5Z_filter s : EnumSet.allOf(H5Z_filter.class))
lookup.put(s.getCode(), s);
}
private int code;
- H5Z_filter(int layout_type) {
- this.code = layout_type;
- }
+ H5Z_filter(int layout_type) { this.code = layout_type; }
- public int getCode() {
- return this.code;
- }
+ public int getCode() { return this.code; }
- public static H5Z_filter get(int code) {
- return lookup.get(code);
- }
+ public static H5Z_filter get(int code) { return lookup.get(code); }
}
- private static boolean checkScaleoffsetFilter() {
+ private static boolean checkScaleoffsetFilter()
+ {
try {
int available = H5.H5Zfilter_avail(HDF5Constants.H5Z_FILTER_SCALEOFFSET);
if (available == 0) {
@@ -82,8 +83,8 @@ public class H5Ex_D_Soint {
try {
int filter_info = H5.H5Zget_filter_info(HDF5Constants.H5Z_FILTER_SCALEOFFSET);
- if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0)
- || ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) {
+ if (((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_ENCODE_ENABLED) == 0) ||
+ ((filter_info & HDF5Constants.H5Z_FILTER_CONFIG_DECODE_ENABLED) == 0)) {
System.out.println("Scale-Offset filter not available for encoding and decoding.");
return false;
}
@@ -94,13 +95,14 @@ public class H5Ex_D_Soint {
return true;
}
- private static void writeData() {
- long file_id = HDF5Constants.H5I_INVALID_HID;
+ private static void writeData()
+ {
+ long file_id = HDF5Constants.H5I_INVALID_HID;
long filespace_id = HDF5Constants.H5I_INVALID_HID;
- long dataset_id = HDF5Constants.H5I_INVALID_HID;
- long dcpl_id = HDF5Constants.H5I_INVALID_HID;
- long[] dims = { DIM_X, DIM_Y };
- long[] chunk_dims = { CHUNK_X, CHUNK_Y };
+ long dataset_id = HDF5Constants.H5I_INVALID_HID;
+ long dcpl_id = HDF5Constants.H5I_INVALID_HID;
+ long[] dims = {DIM_X, DIM_Y};
+ long[] chunk_dims = {CHUNK_X, CHUNK_Y};
int[][] dset_data = new int[DIM_X][DIM_Y];
// Initialize data.
@@ -111,7 +113,7 @@ public class H5Ex_D_Soint {
// Create a new file using the default properties.
try {
file_id = H5.H5Fcreate(FILENAME, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
- HDF5Constants.H5P_DEFAULT);
+ HDF5Constants.H5P_DEFAULT);
}
catch (Exception e) {
e.printStackTrace();
@@ -130,7 +132,8 @@ public class H5Ex_D_Soint {
try {
dcpl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_CREATE);
if (dcpl_id >= 0) {
- H5.H5Pset_scaleoffset(dcpl_id, HDF5Constants.H5Z_SO_INT, HDF5Constants.H5Z_SO_INT_MINBITS_DEFAULT);
+ H5.H5Pset_scaleoffset(dcpl_id, HDF5Constants.H5Z_SO_INT,
+ HDF5Constants.H5Z_SO_INT_MINBITS_DEFAULT);
H5.H5Pset_chunk(dcpl_id, NDIMS, chunk_dims);
}
}
@@ -142,7 +145,7 @@ public class H5Ex_D_Soint {
try {
if ((file_id >= 0) && (filespace_id >= 0) && (dcpl_id >= 0))
dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_I32LE, filespace_id,
- HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
+ HDF5Constants.H5P_DEFAULT, dcpl_id, HDF5Constants.H5P_DEFAULT);
}
catch (Exception e) {
e.printStackTrace();
@@ -151,8 +154,8 @@ public class H5Ex_D_Soint {
// Write the data to the dataset.
try {
if (dataset_id >= 0)
- H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
- HDF5Constants.H5P_DEFAULT, dset_data);
+ H5.H5Dwrite(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
}
catch (Exception e) {
e.printStackTrace();
@@ -193,10 +196,11 @@ public class H5Ex_D_Soint {
}
}
- private static void readData() {
- long file_id = HDF5Constants.H5I_INVALID_HID;
- long dataset_id = HDF5Constants.H5I_INVALID_HID;
- long dcpl_id = HDF5Constants.H5I_INVALID_HID;
+ private static void readData()
+ {
+ long file_id = HDF5Constants.H5I_INVALID_HID;
+ long dataset_id = HDF5Constants.H5I_INVALID_HID;
+ long dcpl_id = HDF5Constants.H5I_INVALID_HID;
int[][] dset_data = new int[DIM_X][DIM_Y];
// Open file using the default properties.
@@ -229,15 +233,15 @@ public class H5Ex_D_Soint {
try {
if (dcpl_id >= 0) {
// Java lib requires a valid filter_name object and cd_values
- int[] flags = { 0 };
- long[] cd_nelmts = { 1 };
- int[] cd_values = { 0 };
- String[] filter_name = { "" };
- int[] filter_config = { 0 };
- int filter_type = -1;
-
- filter_type = H5
- .H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name, filter_config);
+ int[] flags = {0};
+ long[] cd_nelmts = {1};
+ int[] cd_values = {0};
+ String[] filter_name = {""};
+ int[] filter_config = {0};
+ int filter_type = -1;
+
+ filter_type = H5.H5Pget_filter(dcpl_id, 0, flags, cd_nelmts, cd_values, 120, filter_name,
+ filter_config);
System.out.print("Filter type is: ");
switch (H5Z_filter.get(filter_type)) {
case H5Z_FILTER_DEFLATE:
@@ -271,8 +275,8 @@ public class H5Ex_D_Soint {
// Read the data using the default properties.
try {
if (dataset_id >= 0)
- H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
- HDF5Constants.H5P_DEFAULT, dset_data);
+ H5.H5Dread(dataset_id, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data);
}
catch (Exception e) {
e.printStackTrace();
@@ -316,7 +320,8 @@ public class H5Ex_D_Soint {
}
}
- public static void main(String[] args) {
+ public static void main(String[] args)
+ {
// Check if Scale-Offset compression is available and can be used
// for both compression and decompression. Normally we do not
@@ -328,5 +333,4 @@ public class H5Ex_D_Soint {
H5Ex_D_Soint.readData();
}
}
-
}
generated by cgit v0.12 at 2024-07-01 03:30:35 (GMT)