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-rw-r--r--java/examples/datatypes/H5Ex_T_ObjectReference.java124
1 files changed, 55 insertions, 69 deletions
diff --git a/java/examples/datatypes/H5Ex_T_ObjectReference.java b/java/examples/datatypes/H5Ex_T_ObjectReference.java
index 38536b8..98a11df 100644
--- a/java/examples/datatypes/H5Ex_T_ObjectReference.java
+++ b/java/examples/datatypes/H5Ex_T_ObjectReference.java
@@ -70,7 +70,7 @@ public class H5Ex_T_ObjectReference {
long group_id = HDF5Constants.H5I_INVALID_HID;
long dataset_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
- byte[][] dset_data = new byte[DIM0][8];
+ byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE];
// Create a new file using default properties.
try {
@@ -111,50 +111,58 @@ public class H5Ex_T_ObjectReference {
e.printStackTrace();
}
- // Create references to the previously created objects. Passing -1
- // as space_id causes this parameter to be ignored. Other values
- // besides valid dataspaces result in an error.
try {
if (file_id >= 0) {
- byte rbuf0[] = H5.H5Rcreate(file_id, GROUPNAME, HDF5Constants.H5R_OBJECT, -1);
- byte rbuf1[] = H5.H5Rcreate(file_id, DATASETNAME2, HDF5Constants.H5R_OBJECT, -1);
- for (int indx = 0; indx < 8; indx++) {
- dset_data[0][indx] = rbuf0[indx];
- dset_data[1][indx] = rbuf1[indx];
+ try {
+ dset_data[0] = H5.H5Rcreate_object(file_id, GROUPNAME, HDF5Constants.H5P_DEFAULT);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ }
+
+ try {
+ dset_data[1] = H5.H5Rcreate_object(file_id, DATASETNAME2, HDF5Constants.H5P_DEFAULT);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
}
}
+
+ // Create dataspace. Setting maximum size to NULL sets the maximum
+ // size to be the current size.
+ try {
+ filespace_id = H5.H5Screate_simple(RANK, dims, null);
+ }
+ catch (Exception e) {
+ e.printStackTrace();
+ }
+
+ // Create the dataset.
+ try {
+ if ((file_id >= 0) && (filespace_id >= 0))
+ dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_REF, filespace_id,
+ HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+ }
+ catch (Exception e) {
+ e.printStackTrace();
+ }
+
+ // Write the object references to it.
+ try {
+ if (dataset_id >= 0)
+ H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5P_DEFAULT, dset_data);
+ }
+ catch (Exception e) {
+ e.printStackTrace();
+ }
}
- catch (Exception e) {
- e.printStackTrace();
- }
-
- // Create dataspace. Setting maximum size to NULL sets the maximum
- // size to be the current size.
- try {
- filespace_id = H5.H5Screate_simple(RANK, dims, null);
- }
- catch (Exception e) {
- e.printStackTrace();
- }
-
- // Create the dataset.
- try {
- if ((file_id >= 0) && (filespace_id >= 0))
- dataset_id = H5.H5Dcreate(file_id, DATASETNAME, HDF5Constants.H5T_STD_REF_OBJ, filespace_id,
- HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
- }
- catch (Exception e) {
- e.printStackTrace();
- }
-
- // Write the object references to it.
- try {
- if (dataset_id >= 0)
- H5.H5Dwrite(dataset_id, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
- HDF5Constants.H5P_DEFAULT, dset_data);
+ catch (Exception ex) {
+ ex.printStackTrace();
}
- catch (Exception e) {
- e.printStackTrace();
+ finally {
+ try {H5.H5Rdestroy(dset_data[1]);} catch (Exception ex) {}
+ try {H5.H5Rdestroy(dset_data[0]);} catch (Exception ex) {}
}
// End access to the dataset and release resources used by it.
@@ -192,7 +200,7 @@ public class H5Ex_T_ObjectReference {
int object_type = -1;
long object_id = HDF5Constants.H5I_INVALID_HID;
long[] dims = { DIM0 };
- byte[][] dset_data;
+ byte[][] dset_data = new byte[DIM0][HDF5Constants.H5R_REF_BUF_SIZE];
// Open an existing file.
try {
@@ -228,14 +236,10 @@ public class H5Ex_T_ObjectReference {
e.printStackTrace();
}
- // Allocate array of pointers to two-dimensional arrays (the
- // elements of the dataset.
- dset_data = new byte[(int)dims[0]][8];
-
- // Read the data using the default properties.
+ // Read data.
try {
if (dataset_id >= 0) {
- H5.H5Dread(dataset_id, HDF5Constants.H5T_STD_REF_OBJ, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+ H5.H5Dread(dataset_id, HDF5Constants.H5T_STD_REF, HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
HDF5Constants.H5P_DEFAULT, dset_data);
}
}
@@ -250,45 +254,24 @@ public class H5Ex_T_ObjectReference {
// Open the referenced object, get its name and type.
try {
if (dataset_id >= 0) {
- object_id = H5.H5Rdereference(dataset_id, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, dset_data[indx]);
+ object_id = H5.H5Ropen_object(dset_data[indx], HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
object_type = H5.H5Rget_obj_type(dataset_id, HDF5Constants.H5R_OBJECT, dset_data[indx]);
}
String obj_name = null;
if (object_type >= 0) {
- // Get the length of the name and retrieve the name.
+ // Get the name.
obj_name = H5.H5Iget_name(object_id);
}
if ((object_id >= 0) && (object_type >= -1)) {
switch (H5G_obj.get(object_type)) {
case H5G_GROUP:
System.out.print("H5G_GROUP");
- try {
- if (object_id >= 0)
- H5.H5Gclose(object_id);
- }
- catch (Exception e) {
- e.printStackTrace();
- }
break;
case H5G_DATASET:
System.out.print("H5G_DATASET");
- try {
- if (object_id >= 0)
- H5.H5Dclose(object_id);
- }
- catch (Exception e) {
- e.printStackTrace();
- }
break;
case H5G_TYPE:
System.out.print("H5G_TYPE");
- try {
- if (object_id >= 0)
- H5.H5Tclose(object_id);
- }
- catch (Exception e) {
- e.printStackTrace();
- }
break;
default:
System.out.print("UNHANDLED");
@@ -300,6 +283,9 @@ public class H5Ex_T_ObjectReference {
catch (Exception e) {
e.printStackTrace();
}
+ finally {
+ try {H5.H5Oclose(object_id);} catch (Exception ex) {}
+ }
}
// End access to the dataset and release resources used by it.