diff options
Diffstat (limited to 'java/src/hdf/hdf5lib/H5.java')
| -rw-r--r-- | java/src/hdf/hdf5lib/H5.java | 196 |
1 files changed, 179 insertions, 17 deletions
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java index 7b5b5c9..3de49da 100644 --- a/java/src/hdf/hdf5lib/H5.java +++ b/java/src/hdf/hdf5lib/H5.java @@ -4451,7 +4451,7 @@ public class H5 implements java.io.Serializable { // // // //////////////////////////////////////////////////////////// - // Generic property list routines + // /////// Generic property list routines /////// /** * H5Pget_class_name retrieves the name of a generic property list class @@ -4767,7 +4767,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Piterate(long plist, int[] idx, H5P_iterate_cb op, H5P_iterate_t op_data) throws HDF5LibraryException; - // Object creation property list (OCPL) routines + // /////// Object creation property list (OCPL) routines /////// /** * H5Pget_attr_phase_change retrieves attribute storage phase change thresholds. @@ -5071,7 +5071,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_fletcher32(long plist) throws HDF5LibraryException, NullPointerException; - // File creation property list (FCPL) routines + // /////// File creation property list (FCPL) routines /////// /** * H5Pget_userblock retrieves the size of a user block in a file creation property list. @@ -5480,7 +5480,7 @@ public class H5 implements java.io.Serializable { throws HDF5LibraryException, IllegalArgumentException; - // File access property list (FAPL) routines + // /////// File access property list (FAPL) routines /////// /** * H5Pget_alignment retrieves the current settings for alignment properties from a file access property list. @@ -5860,6 +5860,37 @@ public class H5 implements java.io.Serializable { public synchronized static native void H5Pset_metadata_read_attempts(long plist_id, long attempts) throws HDF5LibraryException; + /** + * H5Pget_evict_on_close retrieves the file access property list setting that determines whether an HDF5 object + * will be evicted from the library's metadata cache when it is closed. + * + * @param fapl_id + * IN: File access property list identifier + * + * @return indication if the object will be evicted on close. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native boolean H5Pget_evict_on_close(long fapl_id) + throws HDF5LibraryException; + + /** + * H5Pset_evict_on_close controls the library's behavior of evicting metadata associated with a closed object. + * + * @param fapl_id + * IN: File access property list identifier + * @param evict_on_close + * IN: Whether the HDF5 object should be evicted on close. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native void H5Pset_evict_on_close(long fapl_id, boolean evict_on_close) + throws HDF5LibraryException; + // Dataset creation property list (DCPL) routines // /** @@ -6067,6 +6098,35 @@ public class H5 implements java.io.Serializable { public synchronized static native String H5Pget_virtual_dsetname(long dcpl_id, long index) throws HDF5LibraryException, IllegalArgumentException; /** + * H5Pget_vds_file_cache_size retrieves the size of the vds link open file cache. + * + * @param fapl_id + * IN: File access property list identifier + * + * @return VDS link open file cache size in number of files. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native int H5Pget_vds_file_cache_size(long fapl_id) throws HDF5LibraryException; + + /** + * H5Pset_vds_file_cache_size sets the number of files that can be held open in an vds link open file cache. + * + * @param fapl_id + * IN: File access property list identifier + * @param efc_size + * IN: VDS link open file cache size in number of files. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native void H5Pset_vds_file_cache_size(long fapl_id, int efc_size) + throws HDF5LibraryException; + + /** * H5Pget_external returns information about an external file. * * @param plist @@ -6285,7 +6345,37 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_fill_time(long plist_id, int fill_time) throws HDF5LibraryException, NullPointerException; - // Dataset access property list (DAPL) routines // + // /////// Dataset creation property list (DCPL) routines /////// + + /** + * H5Pset_chunk_opts Sets the edge chunk option in a dataset creation property list. + * + * @param dcpl_id + * IN: Dataset creation property list identifier + * @param opts + * IN: Edge chunk option flag. Valid values are: + * H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS - filters are not applied to partial edge chunks. + * 0 - Disables option; partial edge chunks will be compressed. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library + **/ + public synchronized static native void H5Pset_chunk_opts(long dcpl_id, int opts) throws HDF5LibraryException; + + /** + * H5Pget_chunk_opts retrieves the edge chunk option setting stored in the dataset creation property list . + * + * @param dcpl_id + * IN: Dataset creation property list + + * @return The edge chunk option setting. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library + **/ + public synchronized static native int H5Pget_chunk_opts(long dcpl_id) throws HDF5LibraryException; + + // /////// Dataset access property list (DAPL) routines /////// /** * Retrieves the maximum possible number of elements in the meta data cache and the maximum possible number of bytes @@ -6388,12 +6478,76 @@ public class H5 implements java.io.Serializable { **/ public synchronized static native long H5Pget_virtual_printf_gap(long dapl_id) throws HDF5LibraryException; + /** + * H5Pget_virtual_prefix Retrieves prefix applied to virtual file paths. + * + * @param dapl_id + * IN: Link access property list identifier + * + * @return the prefix to be applied to virtual file paths. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native String H5Pget_virtual_prefix(long dapl_id) + throws HDF5LibraryException; + + /** + * H5Pset_virtual_prefix Sets prefix to be applied to virtual file paths. + * + * @param dapl_id + * IN: Dataset access property list identifier + * @param prefix + * IN: Prefix to be applied to virtual file paths + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * @exception NullPointerException + * - prefix is null. + * + **/ + public synchronized static native void H5Pset_virtual_prefix(long dapl_id, String prefix) + throws HDF5LibraryException, NullPointerException; + + /** + * H5Pget_efile_prefix Retrieves prefix applied to external file paths. + * + * @param dapl_id + * IN: Link access property list identifier + * + * @return the prefix to be applied to external file paths. + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * + **/ + public synchronized static native String H5Pget_efile_prefix(long dapl_id) + throws HDF5LibraryException; + + /** + * H5Pset_efile_prefix Sets prefix to be applied to external file paths. + * + * @param dapl_id + * IN: Dataset access property list identifier + * @param prefix + * IN: Prefix to be applied to external file paths + * + * @exception HDF5LibraryException + * - Error from the HDF-5 Library. + * @exception NullPointerException + * - prefix is null. + * + **/ + public synchronized static native void H5Pset_efile_prefix(long dapl_id, String prefix) + throws HDF5LibraryException, NullPointerException; + // public synchronized static native void H5Pset_append_flush(long plist_id, int ndims, long[] boundary, H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException; // public synchronized static native void H5Pget_append_flush(long plist_id, int dims, long[] boundary, H5D_append_cb func, H5D_append_t udata) throws HDF5LibraryException; - // Dataset xfer property list (DXPL) routines // + // /////// Dataset xfer property list (DXPL) routines /////// /** * H5Pget_data_transform retrieves the data transform expression previously set in the dataset transfer property @@ -6544,7 +6698,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_hyper_vector_size(long dxpl_id, long vector_size) throws HDF5LibraryException, NullPointerException; - // Link creation property list (LCPL) routines // + // /////// Link creation property list (LCPL) routines /////// /** * H5Pget_create_intermediate_group determines whether property is set to enable creating missing intermediate @@ -6579,7 +6733,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_create_intermediate_group(long lcpl_id, boolean crt_intermed_group) throws HDF5LibraryException; - // Group creation property list (GCPL) routines // + // /////// Group creation property list (GCPL) routines /////// /** * H5Pget_local_heap_size_hint Retrieves the anticipated size of the local heap for original-style groups. @@ -6736,14 +6890,14 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_link_creation_order(long gcpl_id, int crt_order_flags) throws HDF5LibraryException; - // String creation property list (STRCPL) routines // + // /////// String creation property list (STRCPL) routines /////// public synchronized static native int H5Pget_char_encoding(long plist_id) throws HDF5LibraryException; public synchronized static native void H5Pset_char_encoding(long plist_id, int encoding) throws HDF5LibraryException; - // Link access property list (LAPL) routines // + // /////// Link access property list (LAPL) routines /////// /** * H5Pget_nlinks retrieves the maximum number of soft or user-defined link traversals allowed, nlinks, before the @@ -6896,7 +7050,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pset_elink_acc_flags(long lapl_id, int flags) throws HDF5LibraryException, IllegalArgumentException; - // Object copy property list (OCPYPL) routines // + // /////// Object copy property list (OCPYPL) routines /////// /** * H5Pget_copy_object retrieves the properties to be used when an object is copied. @@ -6927,7 +7081,7 @@ public class H5 implements java.io.Serializable { public synchronized static native void H5Pset_copy_object(long ocp_plist_id, int copy_options) throws HDF5LibraryException; - // Other/Older property list routines // + // /////// Other/Older property list routines /////// /** * H5Pget_version retrieves the version information of various objects for a file creation property list. @@ -6955,7 +7109,7 @@ public class H5 implements java.io.Serializable { public synchronized static native int H5Pget_version(long plist, int[] version_info) throws HDF5LibraryException, NullPointerException, IllegalArgumentException; - // file drivers property list routines // + // /////// file drivers property list routines /////// public synchronized static native void H5Pget_fapl_core(long fapl_id, long[] increment, boolean[] backing_store) throws HDF5LibraryException, NullPointerException; @@ -7102,20 +7256,28 @@ public class H5 implements java.io.Serializable { // File creation property list (FCPL) routines // // File access property list (FAPL) routines // - // herr_t H5Pset_driver( hid_t plist_id, hid_t new_driver_id, const void *new_driver_info ) - // const void *H5Pget_driver_info( hid_t plist_id ) - // herr_t H5Pget_multi_type ( hid_t fapl_id, H5FD_mem_t *type ) - // herr_t H5Pset_multi_type ( hid_t fapl_id, H5FD_mem_t type ) + // herr_t H5Pset_driver(hid_t plist_id, hid_t new_driver_id, const void *new_driver_info) + // const void *H5Pget_driver_info(hid_t plist_id) + // herr_t H5Pget_multi_type(hid_t fapl_id, H5FD_mem_t *type) + // herr_t H5Pset_multi_type(hid_t fapl_id, H5FD_mem_t type) // herr_t H5Pget_file_image(hid_t fapl_id, void **buf_ptr_ptr, size_t *buf_len_ptr); // herr_t H5Pset_file_image(hid_t fapl_id, void *buf_ptr, size_t buf_len); // herr_t H5Pget_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callbacks_ptr); // herr_t H5Pset_file_image_callbacks(hid_t fapl_id, H5FD_file_image_callbacks_t *callbacks_ptr); // herr_t H5Pset_core_write_tracking(hid_t fapl_id, hbool_t is_enabled, size_t page_size); // herr_t H5Pget_core_write_tracking(hid_t fapl_id, hbool_t *is_enabled, size_t *page_size); + // herr_t H5Pset_all_coll_metadata_ops(hid_t accpl_id, hbool_t is_collective); + // herr_t H5Pset_coll_metadata_write(hid_t fapl_id, hbool_t is_collective); + // herr_t H5Pget_coll_metadata_write(hid_t fapl_id, hbool_t *is_collective); + // herr_t H5Pget_page_buffer_size(hid_t fapl_id, size_t *buf_size, unsigned *min_meta_perc, unsigned *min_raw_perc); + // herr_t H5Pset_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t func, void *user_data); + // herr_t H5Pget_object_flush_cb (hid_t fapl_id, H5F_flush_cb_t *func, void **user_data); // Dataset creation property list (DCPL) routines // // Dataset access property list (DAPL) routines // + // herr_t H5Pset_append_flush (hid_t dapl_id, int ndims, const hsize_t boundary[], H5D_append_cb_t func, void *user_data); + // herr_t H5Pget_append_flush(hid_t dapl_id, int ndims, hsize_t boundary[], H5D_append_cb_t *func, void **user_data) // Dataset xfer property list (DXPL) routines // // herr_t H5Pset_buffer(hid_t plist_id, size_t size, void *tconv, void *bkg); |