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Diffstat (limited to 'java/src/jni/h5aImp.c')
-rw-r--r--java/src/jni/h5aImp.c72
1 files changed, 41 insertions, 31 deletions
diff --git a/java/src/jni/h5aImp.c b/java/src/jni/h5aImp.c
index eaa356e..c1a2631 100644
--- a/java/src/jni/h5aImp.c
+++ b/java/src/jni/h5aImp.c
@@ -94,11 +94,18 @@ JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_H5__1H5Aopen_1name
(JNIEnv *env, jclass clss, jlong loc_id, jstring name)
{
+#ifndef H5_NO_DEPRECATED_SYMBOLS
const char *attrName = NULL;
+#endif
hid_t attr_id = H5I_INVALID_HID;
UNUSED(clss);
+#ifdef H5_NO_DEPRECATED_SYMBOLS
+ UNUSED(loc_id);
+ UNUSED(name);
+ H5_UNIMPLEMENTED(ENVONLY, "H5Aopen_name: not implemented");
+#else
if (NULL == name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Aopen_name: attribute name is null");
@@ -106,10 +113,13 @@ Java_hdf_hdf5lib_H5__1H5Aopen_1name
if((attr_id = H5Aopen_name((hid_t)loc_id, attrName)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
+#endif
done:
+#ifndef H5_NO_DEPRECATED_SYMBOLS
if (attrName)
UNPIN_JAVA_STRING(ENVONLY, name, attrName);
+#endif
return (jlong)attr_id;
} /* end Java_hdf_hdf5lib_H5__1H5Aopen_1name */
@@ -127,8 +137,14 @@ Java_hdf_hdf5lib_H5__1H5Aopen_1idx
UNUSED(clss);
+#ifdef H5_NO_DEPRECATED_SYMBOLS
+ UNUSED(loc_id);
+ UNUSED(idx);
+ H5_UNIMPLEMENTED(ENVONLY, "H5Aopen_idx: not implemented");
+#else
if ((attr_id = H5Aopen_idx((hid_t) loc_id, (unsigned int) idx)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
+#endif
done:
return (jlong)attr_id;
@@ -825,10 +841,10 @@ Java_hdf_hdf5lib_H5_H5Aread_1string
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (cstr = (char *) HDmalloc(str_len + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aread_string: memory allocation failed");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aread_string: memory allocation failed");
if (NULL == (c_buf = (char *) HDmalloc((size_t)n * str_len)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aread_string: memory allocation failed");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aread_string: memory allocation failed");
if ((status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, c_buf)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -839,7 +855,7 @@ Java_hdf_hdf5lib_H5_H5Aread_1string
if (NULL == (jstr = ENVPTR->NewStringUTF(ENVONLY, cstr))) {
CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aread_string: out of memory - unable to construct string from UTF characters");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aread_string: out of memory - unable to construct string from UTF characters");
}
ENVPTR->SetObjectArrayElement(ENVONLY, j_buf, i, jstr);
@@ -889,7 +905,7 @@ Java_hdf_hdf5lib_H5_H5Awrite_1string
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (c_buf = (char *) HDmalloc((size_t)n * str_len)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Awrite_string: memory allocation failed");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Awrite_string: memory allocation failed");
for (i = 0; i < (size_t) n; i++) {
if (NULL == (obj = (jstring) ENVPTR->GetObjectArrayElement(ENVONLY, (jobjectArray)j_buf, (jsize) i))) {
@@ -1021,7 +1037,7 @@ H5AreadVL_str
}
if (NULL == (strs = (char **) HDcalloc((size_t)n, sizeof(char *))))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AreadVL_str: failed to allocate variable length string read buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AreadVL_str: failed to allocate variable length string read buffer");
if ((status = H5Aread(aid, tid, strs)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -1094,7 +1110,7 @@ H5AreadVL_asstr
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (readBuf = HDcalloc((size_t)n, typeSize)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AreadVL_asstr: failed to allocate read buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AreadVL_asstr: failed to allocate read buffer");
if ((status = H5Aread(aid, tid, readBuf)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -1103,7 +1119,7 @@ H5AreadVL_asstr
h5str_new(&h5str, 4 * typeSize);
if (!h5str.s)
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AreadVL_asstr: failed to allocate buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AreadVL_asstr: failed to allocate buffer");
/* Convert each element to a char string */
for (i = 0; i < (size_t) n; i++) {
@@ -1227,7 +1243,7 @@ H5AwriteVL_str
}
if (NULL == (writeBuf = (char **) HDcalloc((size_t)size + 1, sizeof(char *))))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AwriteVL_str: failed to allocate variable length string write buffer")
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AwriteVL_str: failed to allocate variable length string write buffer");
for (i = 0; i < size; ++i) {
jsize length;
@@ -1248,7 +1264,7 @@ H5AwriteVL_str
PIN_JAVA_STRING(ENVONLY, obj, utf8, NULL, "H5AwriteVL_str: string not pinned");
if (NULL == (writeBuf[i] = (char *) HDmalloc((size_t)length + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AwriteVL_str: failed to allocate string buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AwriteVL_str: failed to allocate string buffer");
HDstrncpy(writeBuf[i], utf8, (size_t)length);
writeBuf[i][length] = '\0';
@@ -1288,7 +1304,7 @@ H5AwriteVL_asstr
{
const char *utf8 = NULL;
hsize_t dims[H5S_MAX_RANK];
- jstring jstr;
+ jstring jstr = NULL;
size_t typeSize;
size_t i;
hid_t sid = H5I_INVALID_HID;
@@ -1309,7 +1325,7 @@ H5AwriteVL_asstr
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (writeBuf = HDcalloc((size_t)n, typeSize)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5AwriteVL_asstr: failed to allocate write buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5AwriteVL_asstr: failed to allocate write buffer");
/*
* When repeatedly writing a dataset with a large number of strs (e.g., 1,000,000 strings),
@@ -1390,7 +1406,7 @@ Java_hdf_hdf5lib_H5_H5Aread_1reg_1ref
}
if (NULL == (ref_data = (hdset_reg_ref_t *) HDcalloc(1, (size_t)n * sizeof(hdset_reg_ref_t))))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aread_reg_ref: failed to allocate read buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aread_reg_ref: failed to allocate read buffer");
if ((status = H5Aread((hid_t)attr_id, (hid_t)mem_type_id, ref_data)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -1398,7 +1414,7 @@ Java_hdf_hdf5lib_H5_H5Aread_1reg_1ref
h5str_new(&h5str, 1024);
if (!h5str.s)
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aread_reg_ref: failed to allocate buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aread_reg_ref: failed to allocate buffer");
for (i = 0; i < n; i++) {
h5str.s[0] = '\0';
@@ -1483,7 +1499,7 @@ Java_hdf_hdf5lib_H5_H5Aget_1name
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (attrName = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aget_name: failed to allocate attribute name buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aget_name: failed to allocate attribute name buffer");
if (H5Aget_name((hid_t)attr_id, (size_t)buf_size + 1, attrName) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -1512,8 +1528,13 @@ Java_hdf_hdf5lib_H5_H5Aget_1num_1attrs
UNUSED(clss);
+#ifdef H5_NO_DEPRECATED_SYMBOLS
+ UNUSED(loc_id);
+ H5_UNIMPLEMENTED(ENVONLY, "H5Aget_num_attrs: not implemented");
+#else
if ((retVal = H5Aget_num_attrs((hid_t)loc_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
+#endif
done:
return (jint)retVal;
@@ -1835,7 +1856,7 @@ Java_hdf_hdf5lib_H5_H5Aget_1name_1by_1idx
H5_LIBRARY_ERROR(ENVONLY);
if (NULL == (attrName = (char *) HDmalloc(sizeof(char) * (size_t) status_size + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Aget_name_by_idx: failed to allocate buffer for attribute name");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Aget_name_by_idx: failed to allocate buffer for attribute name");
if ((H5Aget_name_by_idx((hid_t)loc_id, objName, (H5_index_t)idx_type,
(H5_iter_order_t) order, (hsize_t) n, (char *)attrName, (size_t)status_size + 1, (hid_t)lapl_id)) < 0)
@@ -2141,12 +2162,12 @@ static herr_t
H5A_iterate_cb
(hid_t g_id, const char *name, const H5A_info_t *info, void *cb_data) {
cb_wrapper *wrapper = (cb_wrapper *)cb_data;
- jmethodID constructor, mid;
+ jmethodID mid;
jobject cb_info_t = NULL;
jobject visit_callback = wrapper->visit_callback;
jstring str;
JNIEnv *cbenv = NULL;
- jclass cls;
+ jclass cbcls;
jvalue args[4];
void *op_data = (void *)wrapper->op_data;
jint status = -1;
@@ -2156,10 +2177,10 @@ H5A_iterate_cb
H5_JNI_FATAL_ERROR(CBENVONLY, "H5A_iterate_cb: failed to attach current thread to JVM");
}
- if (NULL == (cls = CBENVPTR->GetObjectClass(CBENVONLY, visit_callback)))
+ if (NULL == (cbcls = CBENVPTR->GetObjectClass(CBENVONLY, visit_callback)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- if (NULL == (mid = CBENVPTR->GetMethodID(CBENVONLY, cls, "callback", "(JLjava/lang/String;Lhdf/hdf5lib/structs/H5A_info_t;Lhdf/hdf5lib/callbacks/H5A_iterate_t;)I")))
+ if (NULL == (mid = CBENVPTR->GetMethodID(CBENVONLY, cbcls, "callback", "(JLjava/lang/String;Lhdf/hdf5lib/structs/H5A_info_t;Lhdf/hdf5lib/callbacks/H5A_iterate_t;)I")))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
if (NULL == (str = CBENVPTR->NewStringUTF(CBENVONLY, name)))
@@ -2170,18 +2191,7 @@ H5A_iterate_cb
args[2].i = info->cset;
args[3].j = (jlong)info->data_size;
- /* Get a reference to your class if you don't have it already */
- if (NULL == (cls = CBENVPTR->FindClass(CBENVONLY, "hdf/hdf5lib/structs/H5A_info_t")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- /* Get a reference to the constructor; the name is <init> */
- if (NULL == (constructor = CBENVPTR->GetMethodID(CBENVONLY, cls, "<init>", "(ZJIJ)V")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- if (NULL == (cb_info_t = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args))) {
- HDprintf("FATAL ERROR: hdf/hdf5lib/structs/H5A_info_t: Creation failed\n");
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- }
+ CALL_CONSTRUCTOR(CBENVONLY, "hdf/hdf5lib/structs/H5A_info_t", "(ZJIJ)V", args, cb_info_t);
status = CBENVPTR->CallIntMethod(CBENVONLY, visit_callback, mid, g_id, str, cb_info_t, op_data);
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
generated by cgit v0.12 at 2024-07-15 23:07:41 (GMT)