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-rw-r--r--java/src/jni/h5oImp.c466
1 files changed, 298 insertions, 168 deletions
diff --git a/java/src/jni/h5oImp.c b/java/src/jni/h5oImp.c
index b49a3e9..1d828a1 100644
--- a/java/src/jni/h5oImp.c
+++ b/java/src/jni/h5oImp.c
@@ -40,7 +40,58 @@ typedef struct _cb_wrapper {
/* Local Prototypes */
/********************/
-static herr_t H5O_iterate_cb(hid_t g_id, const char *name, const H5O_info_t *info, void *cb_data);
+static herr_t H5O_iterate_cb(hid_t g_id, const char *name, const H5O_info2_t *info, void *cb_data);
+
+/*
+ * Create a java object of hdf.hdf5lib.structs.H5O_token_t.
+ */
+jobject
+create_H5O_token_t
+ (JNIEnv *envptr, const H5O_token_t *token, hbool_t is_critical_pinning)
+{
+ jbyteArray tokenByteBuf;
+ jboolean token_buf_is_copy;
+ jvalue constructor_args[1];
+ jbyte *token_buf = NULL;
+ jobject ret_token_obj = NULL;
+
+ if (NULL == (tokenByteBuf = (*envptr)->NewByteArray(envptr, H5O_MAX_TOKEN_SIZE)))
+ CHECK_JNI_EXCEPTION(envptr, JNI_FALSE);
+
+ if (is_critical_pinning)
+ PIN_BYTE_ARRAY_CRITICAL(envptr, tokenByteBuf, token_buf, &token_buf_is_copy, "create_H5O_token_t: object token buffer not pinned");
+ else
+ PIN_BYTE_ARRAY(envptr, tokenByteBuf, token_buf, &token_buf_is_copy, "create_H5O_token_t: object token buffer not pinned");
+
+ HDmemcpy(token_buf, token, sizeof(H5O_token_t));
+
+ if (is_critical_pinning)
+ UNPIN_ARRAY_CRITICAL(envptr, tokenByteBuf, token_buf, 0);
+ else
+ UNPIN_BYTE_ARRAY(envptr, tokenByteBuf, token_buf, 0);
+
+ token_buf = NULL;
+
+ constructor_args[0].l = tokenByteBuf;
+ CALL_CONSTRUCTOR(envptr, "hdf/hdf5lib/structs/H5O_token_t", "([B)V", constructor_args, ret_token_obj);
+
+ /*
+ * If critical pinning is being used, this routine is probably being
+ * called within a loop, so we'll clean up local references.
+ */
+ if (is_critical_pinning)
+ (*envptr)->DeleteLocalRef(envptr, tokenByteBuf);
+
+done:
+ if (token_buf) {
+ if (is_critical_pinning)
+ UNPIN_ARRAY_CRITICAL(envptr, tokenByteBuf, token_buf, JNI_ABORT);
+ else
+ UNPIN_BYTE_ARRAY(envptr, tokenByteBuf, token_buf, JNI_ABORT);
+ } /* end if */
+
+ return ret_token_obj;
+} /* end create_H5O_token_t */
/*
* Class: hdf_hdf5lib_H5
@@ -134,17 +185,156 @@ JNIEXPORT jobject JNICALL
Java_hdf_hdf5lib_H5_H5Oget_1info
(JNIEnv *env, jclass clss, jlong loc_id, jint fields)
{
- H5O_info_t infobuf;
- jobject hdrinfobuf;
- jobject ihinfobuf1;
- jobject ihinfobuf2;
- jvalue args[12];
- herr_t status = FAIL;
- jobject ret_obj = NULL;
+ H5O_info2_t infobuf;
+ jobject token;
+ jvalue args[9];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
+
+ UNUSED(clss);
+
+ if ((status = H5Oget_info3((hid_t)loc_id, &infobuf, (unsigned)fields)) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+ if (NULL == (token = create_H5O_token_t(ENVONLY, &infobuf.token, FALSE)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ args[0].j = (jlong)infobuf.fileno;
+ args[1].l = token;
+ args[2].i = infobuf.type;
+ args[3].i = (jint)infobuf.rc;
+ args[4].j = infobuf.atime;
+ args[5].j = infobuf.mtime;
+ args[6].j = infobuf.ctime;
+ args[7].j = infobuf.btime;
+ args[8].j = (jlong)infobuf.num_attrs;
+
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JLhdf/hdf5lib/structs/H5O_token_t;IIJJJJJ)V", args, ret_obj);
+
+done:
+ return ret_obj;
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1info */
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Oget_info_by_name
+ * Signature: (JLjava/lang/String;IJ)Lhdf/hdf5lib/structs/H5O_info_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1name
+ (JNIEnv *env, jclass clss, jlong loc_id, jstring name, jint fields, jlong access_id)
+{
+ H5O_info2_t infobuf;
+ const char *objName = NULL;
+ jobject token;
+ jvalue args[9];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
UNUSED(clss);
- if ((status = H5Oget_info2((hid_t)loc_id, &infobuf, (unsigned)fields)) < 0)
+ if (NULL == name)
+ H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_info_by_name: object name is NULL");
+
+ PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Oget_info_by_name: object name not pinned");
+
+ if ((status = H5Oget_info_by_name3((hid_t)loc_id, objName, &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+ /* Create an H5O_token_t object */
+ if (NULL == (token = create_H5O_token_t(ENVONLY, &infobuf.token, FALSE)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ args[0].j = (jlong)infobuf.fileno;
+ args[1].l = token;
+ args[2].i = infobuf.type;
+ args[3].i = (jint)infobuf.rc;
+ args[4].j = infobuf.atime;
+ args[5].j = infobuf.mtime;
+ args[6].j = infobuf.ctime;
+ args[7].j = infobuf.btime;
+ args[8].j = (jlong)infobuf.num_attrs;
+
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JLhdf/hdf5lib/structs/H5O_token_t;IIJJJJJ)V", args, ret_obj);
+
+done:
+ if (objName)
+ UNPIN_JAVA_STRING(ENVONLY, name, objName);
+
+ return ret_obj;
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1name */
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Oget_info_by_idx
+ * Signature: (JLjava/lang/String;IIJIJ)Lhdf/hdf5lib/structs/H5O_info_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1idx
+ (JNIEnv *env, jclass clss, jlong loc_id,
+ jstring name, jint index_field, jint order, jlong link_n, jint fields, jlong access_id)
+{
+ H5O_info2_t infobuf;
+ const char *grpName = NULL;
+ jobject token;
+ jvalue args[9];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
+
+ UNUSED(clss);
+
+ if (NULL == name)
+ H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_info_by_idx: group name is NULL");
+
+ PIN_JAVA_STRING(ENVONLY, name, grpName, NULL, "H5Oget_info_by_idx: group name not pinned");
+
+ if ((status = H5Oget_info_by_idx3((hid_t)loc_id, grpName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n,
+ &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+ /* Create an H5O_token_t object */
+ if (NULL == (token = create_H5O_token_t(ENVONLY, &infobuf.token, FALSE)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ args[0].j = (jlong)infobuf.fileno;
+ args[1].l = token;
+ args[2].i = infobuf.type;
+ args[3].i = (jint)infobuf.rc;
+ args[4].j = infobuf.atime;
+ args[5].j = infobuf.mtime;
+ args[6].j = infobuf.ctime;
+ args[7].j = infobuf.btime;
+ args[8].j = (jlong)infobuf.num_attrs;
+
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JLhdf/hdf5lib/structs/H5O_token_t;IIJJJJJ)V", args, ret_obj);
+
+done:
+ if (grpName)
+ UNPIN_JAVA_STRING(ENVONLY, name, grpName);
+
+ return ret_obj;
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1idx */
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Oget_native_info
+ * Signature: (JI)Lhdf/hdf5lib/structs/H5O_native_info_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Oget_1native_1info
+ (JNIEnv *env, jclass clss, jlong loc_id, jint fields)
+{
+ H5O_native_info_t infobuf;
+ jobject hdrinfobuf;
+ jobject obj_ihinfobuf;
+ jobject attr_ihinfobuf;
+ jvalue args[10];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
+
+ UNUSED(clss);
+
+ if ((status = H5Oget_native_info((hid_t)loc_id, &infobuf, (unsigned)fields)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
args[0].i = (jint)infobuf.hdr.version;
@@ -165,59 +355,50 @@ Java_hdf_hdf5lib_H5_H5Oget_1info
args[1].j = (jlong)infobuf.meta_size.obj.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf1 = ret_obj;
+ obj_ihinfobuf = ret_obj;
args[0].j = (jlong)infobuf.meta_size.attr.index_size;
args[1].j = (jlong)infobuf.meta_size.attr.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf2 = ret_obj;
+ attr_ihinfobuf = ret_obj;
- args[0].j = (jlong)infobuf.fileno;
- args[1].j = (jlong)infobuf.addr;
- args[2].i = infobuf.type;
- args[3].i = (jint)infobuf.rc;
- args[4].j = (jlong)infobuf.num_attrs;
- args[5].j = infobuf.atime;
- args[6].j = infobuf.mtime;
- args[7].j = infobuf.ctime;
- args[8].j = infobuf.btime;
- args[9].l = hdrinfobuf;
- args[10].l = ihinfobuf1;
- args[11].l = ihinfobuf2;
+ args[0].l = hdrinfobuf;
+ args[1].l = obj_ihinfobuf;
+ args[2].l = attr_ihinfobuf;
- CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JJIIJJJJJLhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_native_info_t", "(Lhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
done:
return ret_obj;
-} /* end Java_hdf_hdf5lib_H5_H5Oget_1info */
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1native_1info */
/*
* Class: hdf_hdf5lib_H5
- * Method: H5Oget_info_by_name
- * Signature: (JLjava/lang/String;IJ)Lhdf/hdf5lib/structs/H5O_info_t;
+ * Method: H5Oget_native_info_by_name
+ * Signature: (JLjava/lang/String;IJ)Lhdf/hdf5lib/structs/H5O_native_info_t;
*/
JNIEXPORT jobject JNICALL
-Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1name
+Java_hdf_hdf5lib_H5_H5Oget_1native_1info_1by_1name
(JNIEnv *env, jclass clss, jlong loc_id, jstring name, jint fields, jlong access_id)
{
- H5O_info_t infobuf;
- const char *objName = NULL;
- jobject hdrinfobuf;
- jobject ihinfobuf1;
- jobject ihinfobuf2;
- jvalue args[12];
- herr_t status = FAIL;
- jobject ret_obj = NULL;
+ H5O_native_info_t infobuf;
+ const char *objName = NULL;
+ jobject hdrinfobuf;
+ jobject obj_ihinfobuf;
+ jobject attr_ihinfobuf;
+ jvalue args[10];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
UNUSED(clss);
if (NULL == name)
- H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_info_by_name: object name is NULL");
+ H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_native_info_by_name: object name is NULL");
- PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Oget_info_by_name: object name not pinned");
+ PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Oget_native_info_by_name: object name not pinned");
- if ((status = H5Oget_info_by_name2((hid_t)loc_id, objName, &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
+ if ((status = H5Oget_native_info_by_name((hid_t)loc_id, objName, &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
args[0].i = (jint)infobuf.hdr.version;
@@ -238,63 +419,55 @@ Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1name
args[1].j = (jlong)infobuf.meta_size.obj.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf1 = ret_obj;
+ obj_ihinfobuf = ret_obj;
args[0].j = (jlong)infobuf.meta_size.attr.index_size;
args[1].j = (jlong)infobuf.meta_size.attr.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf2 = ret_obj;
+ attr_ihinfobuf = ret_obj;
- args[0].j = (jlong)infobuf.fileno;
- args[1].j = (jlong)infobuf.addr;
- args[2].i = infobuf.type;
- args[3].i = (jint)infobuf.rc;
- args[4].j = (jlong)infobuf.num_attrs;
- args[5].j = infobuf.atime;
- args[6].j = infobuf.mtime;
- args[7].j = infobuf.ctime;
- args[8].j = infobuf.btime;
- args[9].l = hdrinfobuf;
- args[10].l = ihinfobuf1;
- args[11].l = ihinfobuf2;
+ args[0].l = hdrinfobuf;
+ args[1].l = obj_ihinfobuf;
+ args[2].l = attr_ihinfobuf;
- CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JJIIJJJJJLhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_native_info_t", "(Lhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
done:
if (objName)
UNPIN_JAVA_STRING(ENVONLY, name, objName);
return ret_obj;
-} /* end Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1name */
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1native_1info_1by_1name */
/*
* Class: hdf_hdf5lib_H5
- * Method: H5Oget_info_by_idx
- * Signature: (JLjava/lang/String;IIJIJ)Lhdf/hdf5lib/structs/H5O_info_t;
+ * Method: H5Oget_native_info_by_idx
+ * Signature: (JLjava/lang/String;IIJIJ)Lhdf/hdf5lib/structs/H5O_native_info_t;
*/
JNIEXPORT jobject JNICALL
-Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1idx
+Java_hdf_hdf5lib_H5_H5Oget_1native_1info_1by_1idx
(JNIEnv *env, jclass clss, jlong loc_id,
jstring name, jint index_field, jint order, jlong link_n, jint fields, jlong access_id)
{
- H5O_info_t infobuf;
- const char *grpName = NULL;
- jobject hdrinfobuf;
- jobject ihinfobuf1;
- jobject ihinfobuf2;
- jvalue args[12];
- herr_t status = FAIL;
- jobject ret_obj = NULL;
+ H5O_native_info_t infobuf;
+ const char *grpName = NULL;
+ jobject hdrinfobuf;
+ jobject obj_ihinfobuf;
+ jobject attr_ihinfobuf;
+ jvalue args[10];
+ herr_t status = FAIL;
+ jobject ret_obj = NULL;
UNUSED(clss);
if (NULL == name)
- H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_info_by_idx: group name is NULL");
+ H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Oget_native_info_by_idx: group name is NULL");
- PIN_JAVA_STRING(ENVONLY, name, grpName, NULL, "H5Oget_info_by_idx: group name not pinned");
+ PIN_JAVA_STRING(ENVONLY, name, grpName, NULL, "H5Oget_native_info_by_idx: group name not pinned");
- if ((status = H5Oget_info_by_idx2((hid_t)loc_id, grpName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n, &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
+ if ((status = H5Oget_native_info_by_idx((hid_t)loc_id, grpName, (H5_index_t)index_field, (H5_iter_order_t)order, (hsize_t)link_n,
+ &infobuf, (unsigned)fields, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
args[0].i = (jint)infobuf.hdr.version;
@@ -315,35 +488,26 @@ Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1idx
args[1].j = (jlong)infobuf.meta_size.obj.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf1 = ret_obj;
+ obj_ihinfobuf = ret_obj;
args[0].j = (jlong)infobuf.meta_size.attr.index_size;
args[1].j = (jlong)infobuf.meta_size.attr.heap_size;
CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t", "(JJ)V", args, ret_obj);
- ihinfobuf2 = ret_obj;
+ attr_ihinfobuf = ret_obj;
- args[0].j = (jlong)infobuf.fileno;
- args[1].j = (jlong)infobuf.addr;
- args[2].i = infobuf.type;
- args[3].i = (jint)infobuf.rc;
- args[4].j = (jlong)infobuf.num_attrs;
- args[5].j = infobuf.atime;
- args[6].j = infobuf.mtime;
- args[7].j = infobuf.ctime;
- args[8].j = infobuf.btime;
- args[9].l = hdrinfobuf;
- args[10].l = ihinfobuf1;
- args[11].l = ihinfobuf2;
+ args[0].l = hdrinfobuf;
+ args[1].l = obj_ihinfobuf;
+ args[2].l = attr_ihinfobuf;
- CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JJIIJJJJJLhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5O_native_info_t", "(Lhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V", args, ret_obj);
done:
if (grpName)
UNPIN_JAVA_STRING(ENVONLY, name, grpName);
return ret_obj;
-} /* end Java_hdf_hdf5lib_H5_H5Oget_1info_1by_1idx */
+} /* end Java_hdf_hdf5lib_H5_H5Oget_1native_1info_1by_1idx */
/*
* Class: hdf_hdf5lib_H5
@@ -375,15 +539,13 @@ done:
static herr_t
H5O_iterate_cb
- (hid_t g_id, const char *name, const H5O_info_t *info, void *cb_data)
+ (hid_t g_id, const char *name, const H5O_info2_t *info, void *cb_data)
{
cb_wrapper *wrapper = (cb_wrapper *)cb_data;
- jmethodID constructor, mid;
+ jmethodID mid;
jobject cb_info_t = NULL;
jobject visit_callback = wrapper->visit_callback;
- jobject hdrinfobuf;
- jobject ihinfobuf1;
- jobject ihinfobuf2;
+ jobject token;
jstring str;
JNIEnv *cbenv = NULL;
jclass cls;
@@ -399,85 +561,28 @@ H5O_iterate_cb
if (NULL == (cls = CBENVPTR->GetObjectClass(CBENVONLY, visit_callback)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- if (NULL == (mid = CBENVPTR->GetMethodID(CBENVONLY, cls, "callback", "(JLjava/lang/String;Lhdf/hdf5lib/structs/H5O_info_t;Lhdf/hdf5lib/callbacks/H5O_iterate_t;)I")))
+ if (NULL == (mid = CBENVPTR->GetMethodID(CBENVONLY, cls, "callback", "(JLjava/lang/String;Lhdf/hdf5lib/structs/H5O_info_t;Lhdf/hdf5lib/callbacks/H5O_iterate_opdata_t;)I")))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
if (NULL == (str = CBENVPTR->NewStringUTF(CBENVONLY, name)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- args[0].i = (jint)info->hdr.version;
- args[1].i = (jint)info->hdr.nmesgs;
- args[2].i = (jint)info->hdr.nchunks;
- args[3].i = (jint)info->hdr.flags;
- args[4].j = (jlong)info->hdr.space.total;
- args[5].j = (jlong)info->hdr.space.meta;
- args[6].j = (jlong)info->hdr.space.mesg;
- args[7].j = (jlong)info->hdr.space.free;
- args[8].j = (jlong)info->hdr.mesg.present;
- args[9].j = (jlong)info->hdr.mesg.shared;
-
- /* Get a reference to the H5_hdr_info_t class */
- if (NULL == (cls = CBENVPTR->FindClass(CBENVONLY, "hdf/hdf5lib/structs/H5O_hdr_info_t")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- /* Get a reference to the constructor; the name is <init> */
- if (NULL == (constructor = CBENVPTR->GetMethodID(CBENVONLY, cls, "<init>", "(IIIIJJJJJJ)V")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- if (NULL == (hdrinfobuf = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args))) {
- HDprintf("H5O_iterate_cb ERROR: hdf/hdf5lib/structs/H5O_hdr_info_t: Creation failed\n");
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- }
-
- args[0].j = (jlong)info->meta_size.obj.index_size;
- args[1].j = (jlong)info->meta_size.obj.heap_size;
-
- /* Get a reference to the H5_ih_info_t class */
- if (NULL == (cls = CBENVPTR->FindClass(CBENVONLY, "hdf/hdf5lib/structs/H5_ih_info_t")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- /* Get a reference to the constructor; the name is <init> */
- if (NULL == (constructor = CBENVPTR->GetMethodID(CBENVONLY, cls, "<init>", "(JJ)V")))
+ /* Create an H5O_token_t object */
+ if (NULL == (token = create_H5O_token_t(CBENVONLY, &info->token, FALSE)))
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- if (NULL == (ihinfobuf1 = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args))) {
- HDprintf("H5O_iterate_cb ERROR: hdf/hdf5lib/structs/H5_ih_info_t: Creation failed\n");
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- }
-
- args[0].j = (jlong)info->meta_size.attr.index_size;
- args[1].j = (jlong)info->meta_size.attr.heap_size;
-
- if (NULL == (ihinfobuf2 = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args))) {
- HDprintf("H5O_iterate_cb ERROR: hdf/hdf5lib/structs/H5_ih_info_t: Creation failed\n");
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- }
-
args[0].j = (jlong)info->fileno;
- args[1].j = (jlong)info->addr;
+ args[1].l = token;
args[2].i = info->type;
args[3].i = (jint)info->rc;
- args[4].j = (jlong)info->num_attrs;
- args[5].j = info->atime;
- args[6].j = info->mtime;
- args[7].j = info->ctime;
- args[8].j = info->btime;
- args[9].l = hdrinfobuf;
- args[10].l = ihinfobuf1;
- args[11].l = ihinfobuf2;
+ args[4].j = info->atime;
+ args[5].j = info->mtime;
+ args[6].j = info->ctime;
+ args[7].j = info->btime;
+ args[8].j = (jlong)info->num_attrs;
/* Get a reference to the H5O_info_t class */
- if (NULL == (cls = CBENVPTR->FindClass(CBENVONLY, "hdf/hdf5lib/structs/H5O_info_t")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- /* Get a reference to the constructor; the name is <init> */
- if (NULL == (constructor = CBENVPTR->GetMethodID(CBENVONLY, cls, "<init>", "(JJIIJJJJJLhdf/hdf5lib/structs/H5O_hdr_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;Lhdf/hdf5lib/structs/H5_ih_info_t;)V")))
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
-
- if (NULL == (cb_info_t = CBENVPTR->NewObjectA(CBENVONLY, cls, constructor, args))) {
- HDprintf("H5O_iterate_cb ERROR: hdf/hdf5lib/structs/H5O_info_t: Creation failed\n");
- CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
- }
+ CALL_CONSTRUCTOR(CBENVONLY, "hdf/hdf5lib/structs/H5O_info_t", "(JLhdf/hdf5lib/structs/H5O_token_t;IIJJJJJ)V", args, cb_info_t);
status = CBENVPTR->CallIntMethod(CBENVONLY, visit_callback, mid, g_id, str, cb_info_t, op_data);
CHECK_JNI_EXCEPTION(CBENVONLY, JNI_FALSE);
@@ -512,7 +617,8 @@ Java_hdf_hdf5lib_H5_H5Ovisit
if (NULL == callback_op)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Ovisit: callback_op is NULL");
- if ((status = H5Ovisit2((hid_t)grp_id, (H5_index_t)idx_type, (H5_iter_order_t)order, (H5O_iterate_t)H5O_iterate_cb, (void *)&wrapper, (unsigned)fields)) < 0)
+ if ((status = H5Ovisit3((hid_t)grp_id, (H5_index_t)idx_type, (H5_iter_order_t)order,
+ H5O_iterate_cb, (void *)&wrapper, (unsigned)fields)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
@@ -547,7 +653,8 @@ Java_hdf_hdf5lib_H5_H5Ovisit_1by_1name
PIN_JAVA_STRING(ENVONLY, name, objName, NULL, "H5Ovisit_by_name: object name not pinned");
- if ((status = H5Ovisit_by_name2((hid_t)grp_id, objName, (H5_index_t)idx_type, (H5_iter_order_t)order, (H5O_iterate_t)H5O_iterate_cb, (void *)&wrapper, (unsigned)fields, (hid_t)access_id)) < 0)
+ if ((status = H5Ovisit_by_name3((hid_t)grp_id, objName, (H5_index_t)idx_type, (H5_iter_order_t)order,
+ H5O_iterate_cb, (void *)&wrapper, (unsigned)fields, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
@@ -639,7 +746,7 @@ Java_hdf_hdf5lib_H5_H5Oget_1comment
if (buf_size) {
if (NULL == (oComment = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Oget_comment: failed to allocate object comment buffer");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Oget_comment: failed to allocate object comment buffer");
if ((status = H5Oget_comment((hid_t)loc_id, oComment, (size_t)buf_size + 1)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -684,7 +791,7 @@ Java_hdf_hdf5lib_H5_H5Oget_1comment_1by_1name
if (buf_size) {
if (NULL == (objComment = (char *) HDmalloc(sizeof(char) * (size_t)buf_size + 1)))
- H5_JNI_FATAL_ERROR(ENVONLY, "H5Oget_comment_by_name: failed to allocate buffer for object comment");
+ H5_OUT_OF_MEMORY_ERROR(ENVONLY, "H5Oget_comment_by_name: failed to allocate buffer for object comment");
if ((status = H5Oget_comment_by_name((hid_t)loc_id, objName, objComment, (size_t)buf_size + 1, (hid_t)access_id)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
@@ -772,23 +879,46 @@ done:
/*
* Class: hdf_hdf5lib_H5
- * Method: _H5Oopen_by_addr
- * Signature: (JJ)J;
+ * Method: _H5Oopen_by_token
+ * Signature: (JLhdf/hdf5lib/structs/H5O_token_t;)J;
*/
JNIEXPORT jlong JNICALL
-Java_hdf_hdf5lib_H5__1H5Oopen_1by_1addr
- (JNIEnv *env, jclass clss, jlong loc_id, jlong addr)
+Java_hdf_hdf5lib_H5__1H5Oopen_1by_1token
+ (JNIEnv *env, jclass clss, jlong loc_id, jobject token)
{
- hid_t retVal = H5I_INVALID_HID;
+ H5O_token_t obj_token;
+ jboolean token_buf_is_copy;
+ jfieldID token_data_field_id;
+ jclass token_cls;
+ jbyte *token_buf = NULL;
+ jobject token_data;
+ hid_t retVal = H5I_INVALID_HID;
UNUSED(clss);
- if ((retVal = H5Oopen_by_addr((hid_t)loc_id, (haddr_t)addr)) < 0)
+ token_cls = ENVPTR->GetObjectClass(ENVONLY, token);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (token_data_field_id = ENVPTR->GetFieldID(ENVONLY, token_cls, "data", "[B")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ token_data = ENVPTR->GetObjectField(ENVONLY, token, token_data_field_id);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ PIN_BYTE_ARRAY(ENVONLY, (jbyteArray)token_data, token_buf, &token_buf_is_copy, "H5Oopen_by_token: token buffer not pinned");
+ HDmemcpy(&obj_token, token_buf, sizeof(H5O_token_t));
+ UNPIN_BYTE_ARRAY(ENVONLY, (jbyteArray)token_data, token_buf, JNI_ABORT);
+ token_buf = NULL;
+
+ if ((retVal = H5Oopen_by_token((hid_t)loc_id, obj_token)) < 0)
H5_LIBRARY_ERROR(ENVONLY);
done:
+ if (token_buf)
+ UNPIN_BYTE_ARRAY(ENVONLY, (jbyteArray)token_data, token_buf, (retVal < 0) ? JNI_ABORT : 0);
+
return (jlong)retVal;
-} /* end Java_hdf_hdf5lib_H5__1H5Oopen_1by_1addr */
+} /* end Java_hdf_hdf5lib_H5__1H5Oopen_1by_1token */
/*
* Class: hdf_hdf5lib_H5
generated by cgit v0.12 at 2024-07-15 16:43:13 (GMT)