diff options
Diffstat (limited to 'java/src/jni/h5util.c')
| -rw-r--r-- | java/src/jni/h5util.c | 121 |
1 files changed, 80 insertions, 41 deletions
diff --git a/java/src/jni/h5util.c b/java/src/jni/h5util.c index 90c8ad2..e39b342 100644 --- a/java/src/jni/h5util.c +++ b/java/src/jni/h5util.c @@ -68,7 +68,9 @@ static int render_bin_output_region_points(FILE *stream, hid_t region_space, /** frees memory held by array of strings */ void -h5str_array_free(char **strs, size_t len) { +h5str_array_free + (char **strs, size_t len) +{ size_t i; if (!strs || len <= 0) @@ -83,7 +85,9 @@ h5str_array_free(char **strs, size_t len) { /** allocate a new str with given length */ void -h5str_new(h5str_t *str, size_t len) { +h5str_new + (h5str_t *str, size_t len) +{ if (str && len > 0) { str->s = (char *)HDmalloc(len); str->max = len; @@ -93,7 +97,9 @@ h5str_new(h5str_t *str, size_t len) { /** free string memory */ void -h5str_free(h5str_t *str) { +h5str_free + (h5str_t *str) +{ if (str && str->max > 0) { HDfree(str->s); HDmemset(str, 0, sizeof(h5str_t)); @@ -102,7 +108,9 @@ h5str_free(h5str_t *str) { /** reset the max size of the string */ void -h5str_resize(h5str_t *str, size_t new_len) { +h5str_resize + (h5str_t *str, size_t new_len) +{ char *new_str; if (!str || new_len <= 0 || str->max == new_len) @@ -124,7 +132,9 @@ h5str_resize(h5str_t *str, size_t new_len) { the char string point to str->s */ char* -h5str_append(h5str_t *str, const char* cstr) { +h5str_append + (h5str_t *str, const char* cstr) +{ size_t len; if (!str) @@ -147,7 +157,9 @@ h5str_append(h5str_t *str, const char* cstr) { On error, a negative number is returned. */ size_t -h5str_sprintf(h5str_t *str, hid_t container, hid_t tid, void *ptr, int expand_data) { +h5str_sprintf + (h5str_t *str, hid_t container, hid_t tid, void *ptr, int expand_data) +{ unsigned char tmp_uchar = 0; char tmp_char = 0; unsigned short tmp_ushort = 0; @@ -502,8 +514,8 @@ h5str_sprintf(h5str_t *str, hid_t container, hid_t tid, void *ptr, int expand_da *------------------------------------------------------------------------- */ static int -h5str_print_region_data_blocks(hid_t region_id, - h5str_t *str, int ndims, hid_t type_id, hssize_t nblocks, hsize_t *ptdata) +h5str_print_region_data_blocks + (hid_t region_id, h5str_t *str, int ndims, hid_t type_id, hssize_t nblocks, hsize_t *ptdata) { hsize_t *dims1 = NULL; hsize_t *start = NULL; @@ -601,7 +613,8 @@ h5str_print_region_data_blocks(hid_t region_id, } /* end h5str_print_region_data_blocks */ int -h5str_dump_region_blocks_data(h5str_t *str, hid_t region, hid_t region_id) +h5str_dump_region_blocks_data + (h5str_t *str, hid_t region, hid_t region_id) { int ret_value = 0; hssize_t nblocks; @@ -654,7 +667,8 @@ h5str_dump_region_blocks_data(h5str_t *str, hid_t region, hid_t region_id) } /* end h5str_dump_region_blocks_data */ static int -h5str_dump_region_blocks(h5str_t *str, hid_t region, hid_t region_id) +h5str_dump_region_blocks + (h5str_t *str, hid_t region, hid_t region_id) { int ret_value = 0; hssize_t nblocks; @@ -725,8 +739,8 @@ h5str_dump_region_blocks(h5str_t *str, hid_t region, hid_t region_id) *------------------------------------------------------------------------- */ static int -h5str_print_region_data_points(hid_t region_space, hid_t region_id, - h5str_t *str, int ndims, hid_t type_id, hssize_t npoints, hsize_t *ptdata) +h5str_print_region_data_points + (hid_t region_space, hid_t region_id, h5str_t *str, int ndims, hid_t type_id, hssize_t npoints, hsize_t *ptdata) { hsize_t *dims1 = NULL; hsize_t total_size[H5S_MAX_RANK]; @@ -789,7 +803,8 @@ h5str_print_region_data_points(hid_t region_space, hid_t region_id, } /* end h5str_print_region_data_points */ int -h5str_dump_region_points_data(h5str_t *str, hid_t region, hid_t region_id) +h5str_dump_region_points_data + (h5str_t *str, hid_t region, hid_t region_id) { int ret_value = 0; hssize_t npoints; @@ -842,7 +857,8 @@ h5str_dump_region_points_data(h5str_t *str, hid_t region, hid_t region_id) } /* end h5str_dump_region_points_data */ static int -h5str_dump_region_points(h5str_t *str, hid_t region, hid_t region_id) +h5str_dump_region_points + (h5str_t *str, hid_t region, hid_t region_id) { int ret_value = 0; hssize_t npoints; @@ -895,7 +911,9 @@ h5str_dump_region_points(h5str_t *str, hid_t region, hid_t region_id) } /* end h5str_dump_region_points */ static int -h5str_is_zero(const void *_mem, size_t size) { +h5str_is_zero + (const void *_mem, size_t size) +{ const unsigned char *mem = (const unsigned char *) _mem; while (size-- > 0) @@ -918,7 +936,8 @@ h5str_is_zero(const void *_mem, size_t size) { *------------------------------------------------------------------------- */ static htri_t -h5str_detect_vlen_str(hid_t tid) +h5str_detect_vlen_str + (hid_t tid) { H5T_class_t tclass = H5T_NO_CLASS; htri_t ret = 0; @@ -977,7 +996,8 @@ done: *------------------------------------------------------------------------- */ static hid_t -h5str_get_native_type(hid_t type) +h5str_get_native_type + (hid_t type) { hid_t p_type; H5T_class_t type_class; @@ -1002,7 +1022,8 @@ h5str_get_native_type(hid_t type) *------------------------------------------------------------------------- */ static hid_t -h5str_get_little_endian_type(hid_t tid) +h5str_get_little_endian_type + (hid_t tid) { hid_t p_type=-1; H5T_class_t type_class; @@ -1072,7 +1093,8 @@ h5str_get_little_endian_type(hid_t tid) *------------------------------------------------------------------------- */ static hid_t -h5str_get_big_endian_type(hid_t tid) +h5str_get_big_endian_type + (hid_t tid) { hid_t p_type=-1; H5T_class_t type_class; @@ -1144,7 +1166,8 @@ h5str_get_big_endian_type(hid_t tid) *------------------------------------------------------------------------- */ static htri_t -h5str_detect_vlen(hid_t tid) +h5str_detect_vlen + (hid_t tid) { htri_t ret; @@ -1172,7 +1195,8 @@ done: *------------------------------------------------------------------------- */ static int -h5str_render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t block_nelmts) +h5str_render_bin_output + (FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t block_nelmts) { int ret_value = 0; unsigned char *mem = (unsigned char*)_mem; @@ -1385,8 +1409,8 @@ h5str_render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hs *------------------------------------------------------------------------- */ static int -render_bin_output_region_data_blocks(FILE *stream, hid_t region_id, - hid_t container, int ndims, hid_t type_id, hssize_t nblocks, hsize_t *ptdata) +render_bin_output_region_data_blocks + (FILE *stream, hid_t region_id, hid_t container, int ndims, hid_t type_id, hssize_t nblocks, hsize_t *ptdata) { hsize_t *dims1 = NULL; hsize_t *start = NULL; @@ -1495,7 +1519,8 @@ render_bin_output_region_data_blocks(FILE *stream, hid_t region_id, *------------------------------------------------------------------------- */ static int -render_bin_output_region_blocks(FILE *stream, hid_t region_space, hid_t region_id, hid_t container) +render_bin_output_region_blocks + (FILE *stream, hid_t region_space, hid_t region_id, hid_t container) { int ret_value = SUCCEED; hssize_t nblocks; @@ -1557,7 +1582,8 @@ render_bin_output_region_blocks(FILE *stream, hid_t region_space, hid_t region_i *------------------------------------------------------------------------- */ static int -render_bin_output_region_data_points(FILE *stream, hid_t region_space, hid_t region_id, +render_bin_output_region_data_points + (FILE *stream, hid_t region_space, hid_t region_id, hid_t container, int ndims, hid_t type_id, hssize_t npoints, hsize_t *ptdata) { hsize_t *dims1 = NULL; @@ -1616,7 +1642,8 @@ render_bin_output_region_data_points(FILE *stream, hid_t region_space, hid_t reg *------------------------------------------------------------------------- */ static int -render_bin_output_region_points(FILE *stream, hid_t region_space, hid_t region_id, hid_t container) +render_bin_output_region_points + (FILE *stream, hid_t region_space, hid_t region_id, hid_t container) { int ret_value = SUCCEED; hssize_t npoints; @@ -1668,7 +1695,8 @@ render_bin_output_region_points(FILE *stream, hid_t region_space, hid_t region_i } /* end render_bin_output_region_points */ int -h5str_dump_simple_dset(FILE *stream, hid_t dset, int binary_order) +h5str_dump_simple_dset + (FILE *stream, hid_t dset, int binary_order) { int ret_value = SUCCEED; hid_t f_space = -1; /* file data space */ @@ -1827,7 +1855,8 @@ h5str_dump_simple_dset(FILE *stream, hid_t dset, int binary_order) } /* end h5str_dump_simple_dset */ static int -h5tools_dump_simple_data(FILE *stream, hid_t container, hid_t type, void *_mem, hsize_t nelmts) +h5tools_dump_simple_data + (FILE *stream, hid_t container, hid_t type, void *_mem, hsize_t nelmts) { int ret_value = 0; int line_count; @@ -1875,7 +1904,8 @@ h5tools_dump_simple_data(FILE *stream, hid_t container, hid_t type, void *_mem, * Signature: (JJ[Ljava/lang/String;)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5AwriteVL(JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) +Java_hdf_hdf5lib_H5_H5AwriteVL + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) { herr_t status = -1; char **wdata; @@ -1931,7 +1961,8 @@ Java_hdf_hdf5lib_H5_H5AwriteVL(JNIEnv *env, jclass clss, jlong attr_id, jlong me * Signature: (JJ[Ljava/lang/String;)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5AreadVL(JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) +Java_hdf_hdf5lib_H5_H5AreadVL + (JNIEnv *env, jclass clss, jlong attr_id, jlong mem_type_id, jobjectArray buf) { herr_t status = -1; jstring jstr; @@ -1984,7 +2015,8 @@ Java_hdf_hdf5lib_H5_H5AreadVL(JNIEnv *env, jclass clss, jlong attr_id, jlong mem * Signature: (JJ)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Acopy(JNIEnv *env, jclass clss, jlong src_id, jlong dst_id) +Java_hdf_hdf5lib_H5_H5Acopy + (JNIEnv *env, jclass clss, jlong src_id, jlong dst_id) { jbyte *buf; herr_t retVal = -1; @@ -2053,7 +2085,8 @@ Java_hdf_hdf5lib_H5_H5Acopy(JNIEnv *env, jclass clss, jlong src_id, jlong dst_id * Signature: (JJ)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Dcopy(JNIEnv *env, jclass clss, jlong src_id, jlong dst_id) +Java_hdf_hdf5lib_H5_H5Dcopy + (JNIEnv *env, jclass clss, jlong src_id, jlong dst_id) { jbyte *buf; herr_t retVal = -1; @@ -2158,7 +2191,8 @@ typedef struct info_all * Signature: (JLjava/lang/String;[Ljava/lang/String;[I[I[J[JIII)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1full(JNIEnv *env, jclass clss, jlong loc_id, jstring group_name, +Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1full + (JNIEnv *env, jclass clss, jlong loc_id, jstring group_name, jobjectArray objName, jintArray oType, jintArray lType, jlongArray fNo, jlongArray oRef, jint n, jint indx_type, jint indx_order) { @@ -2311,9 +2345,9 @@ Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1full(JNIEnv *env, jclass clss, jlong loc_ * Signature: (J[Ljava/lang/String;[I[I[JJI)I */ JNIEXPORT jint JNICALL -Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1max(JNIEnv *env, jclass clss, jlong loc_id, jobjectArray objName, - jintArray oType, jintArray lType, jlongArray oRef, - jlong maxnum, jint n) +Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1max + (JNIEnv *env, jclass clss, jlong loc_id, jobjectArray objName, + jintArray oType, jintArray lType, jlongArray oRef, jlong maxnum, jint n) { herr_t ret_val = -1; char **oName=NULL; @@ -2406,7 +2440,8 @@ Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1max(JNIEnv *env, jclass clss, jlong loc_i } /* end Java_hdf_hdf5lib_H5_H5Gget_1obj_1info_1max */ int -H5Gget_obj_info_full(hid_t loc_id, char **objname, int *otype, int *ltype, unsigned long *fno, unsigned long *objno, int indexType, int indexOrder) +H5Gget_obj_info_full + (hid_t loc_id, char **objname, int *otype, int *ltype, unsigned long *fno, unsigned long *objno, int indexType, int indexOrder) { info_all_t info; info.objname = objname; @@ -2427,7 +2462,8 @@ H5Gget_obj_info_full(hid_t loc_id, char **objname, int *otype, int *ltype, unsig } /* end H5Gget_obj_info_full */ int -H5Gget_obj_info_max(hid_t loc_id, char **objname, int *otype, int *ltype, unsigned long *objno, long maxnum) +H5Gget_obj_info_max + (hid_t loc_id, char **objname, int *otype, int *ltype, unsigned long *objno, long maxnum) { info_all_t info; info.objname = objname; @@ -2444,7 +2480,8 @@ H5Gget_obj_info_max(hid_t loc_id, char **objname, int *otype, int *ltype, unsign } /* end H5Gget_obj_info_max */ herr_t -obj_info_all(hid_t loc_id, const char *name, const H5L_info_t *info, void *op_data) +obj_info_all + (hid_t loc_id, const char *name, const H5L_info_t *info, void *op_data) { int type = -1; hid_t oid = -1; @@ -2483,7 +2520,8 @@ obj_info_all(hid_t loc_id, const char *name, const H5L_info_t *info, void *op_da } /* end obj_info_all */ herr_t -obj_info_max(hid_t loc_id, const char *name, const H5L_info_t *info, void *op_data) +obj_info_max + (hid_t loc_id, const char *name, const H5L_info_t *info, void *op_data) { int type = -1; herr_t retVal = 0; @@ -2522,7 +2560,8 @@ obj_info_max(hid_t loc_id, const char *name, const H5L_info_t *info, void *op_da * Signature: (Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;I)V */ JNIEXPORT void JNICALL -Java_hdf_hdf5lib_H5_H5export_1dataset(JNIEnv *env, jclass cls, jstring file_export_name, jstring file_name, jstring object_path, jint binary_order) +Java_hdf_hdf5lib_H5_H5export_1dataset + (JNIEnv *env, jclass cls, jstring file_export_name, jstring file_name, jstring object_path, jint binary_order) { herr_t status = -1; herr_t ret_val = -1; |