diff options
Diffstat (limited to 'java/test/TestH5A.java')
| -rw-r--r-- | java/test/TestH5A.java | 161 |
1 files changed, 157 insertions, 4 deletions
diff --git a/java/test/TestH5A.java b/java/test/TestH5A.java index 4437ec7..095691e 100644 --- a/java/test/TestH5A.java +++ b/java/test/TestH5A.java @@ -1415,7 +1415,7 @@ public class TestH5A { HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); assertTrue("testH5AVLwr: ", attr_int_id >= 0); - H5.H5AwriteVL(attr_int_id, atype_int_id, vl_int_data); + H5.H5Awrite(attr_int_id, atype_int_id, vl_int_data); } catch (Exception err) { if (attr_int_id > 0) @@ -1472,7 +1472,7 @@ public class TestH5A { HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); assertTrue("testH5AVLwr: ", attr_dbl_id >= 0); - H5.H5AwriteVL(attr_dbl_id, atype_dbl_id, vl_dbl_data); + H5.H5Awrite(attr_dbl_id, atype_dbl_id, vl_dbl_data); } catch (Exception err) { if (attr_dbl_id > 0) @@ -1511,7 +1511,7 @@ public class TestH5A { vl_readbuf[j] = new ArrayList<Integer>(); try { - H5.H5AreadVL(attr_int_id, atype_int_id, vl_readbuf); + H5.H5Aread(attr_int_id, atype_int_id, vl_readbuf); } catch (Exception ex) { ex.printStackTrace(); @@ -1531,7 +1531,7 @@ public class TestH5A { vl_readbuf[j] = new ArrayList<Double>(); try { - H5.H5AreadVL(attr_dbl_id, atype_dbl_id, vl_readbuf); + H5.H5Aread(attr_dbl_id, atype_dbl_id, vl_readbuf); } catch (Exception ex) { ex.printStackTrace(); @@ -1576,4 +1576,157 @@ public class TestH5A { } } } + + @Test + public void testH5AVLwrVL() + { + String attr_int_name = "VLIntdata"; + long attr_int_id = HDF5Constants.H5I_INVALID_HID; + long atype_int_id = HDF5Constants.H5I_INVALID_HID; + long base_atype_int_id = HDF5Constants.H5I_INVALID_HID; + long aspace_id = HDF5Constants.H5I_INVALID_HID; + long[] dims = {4}; + long lsize = 1; + + ArrayList[] base_vl_int_data = new ArrayList[4]; + ArrayList[] vl_int_data = new ArrayList[4]; + try { + // Write Integer data + vl_int_data[0] = new ArrayList<Integer>(Arrays.asList(1)); + vl_int_data[1] = new ArrayList<Integer>(Arrays.asList(2, 3)); + vl_int_data[2] = new ArrayList<Integer>(Arrays.asList(4, 5, 6)); + vl_int_data[3] = new ArrayList<Integer>(Arrays.asList(7, 8, 9, 10)); + Class dataClass = vl_int_data.getClass(); + assertTrue("testH5AVLwrVL.getClass: " + dataClass, dataClass.isArray()); + + // Write VL data + base_vl_int_data[0] = new ArrayList<ArrayList<Integer>>(); + base_vl_int_data[0].add(vl_int_data[0]); + base_vl_int_data[1] = new ArrayList<ArrayList<Integer>>(); + base_vl_int_data[1].add(vl_int_data[0]); + base_vl_int_data[1].add(vl_int_data[1]); + base_vl_int_data[2] = new ArrayList<ArrayList<Integer>>(); + base_vl_int_data[2].add(vl_int_data[0]); + base_vl_int_data[2].add(vl_int_data[1]); + base_vl_int_data[2].add(vl_int_data[2]); + base_vl_int_data[3] = new ArrayList<ArrayList<Integer>>(); + base_vl_int_data[3].add(vl_int_data[0]); + base_vl_int_data[3].add(vl_int_data[1]); + base_vl_int_data[3].add(vl_int_data[2]); + base_vl_int_data[3].add(vl_int_data[3]); + + try { + atype_int_id = H5.H5Tvlen_create(HDF5Constants.H5T_STD_U32LE); + assertTrue("testH5AVLwr.H5Tvlen_create: ", atype_int_id >= 0); + base_atype_int_id = H5.H5Tvlen_create(atype_int_id); + assertTrue("testH5AVLwrVL.H5Tvlen_create: ", base_atype_int_id >= 0); + } + catch (Exception err) { + if (base_atype_int_id > 0) + try { + H5.H5Tclose(base_atype_int_id); + } + catch (Exception ex) { + } + err.printStackTrace(); + fail("H5.testH5AVLwrVL: " + err); + } + + try { + aspace_id = H5.H5Screate_simple(1, dims, null); + assertTrue(aspace_id > 0); + attr_int_id = H5.H5Acreate(H5did, attr_int_name, base_atype_int_id, aspace_id, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + assertTrue("testH5AVLwrVL: ", attr_int_id >= 0); + + H5.H5Awrite(attr_int_id, base_atype_int_id, base_vl_int_data); + } + catch (Exception err) { + if (attr_int_id > 0) + try { + H5.H5Aclose(attr_int_id); + } + catch (Exception ex) { + } + if (atype_int_id > 0) + try { + H5.H5Tclose(atype_int_id); + } + catch (Exception ex) { + } + err.printStackTrace(); + fail("H5.testH5AVLwrVL: " + err); + } + finally { + if (aspace_id > 0) + try { + H5.H5Sclose(aspace_id); + } + catch (Exception ex) { + } + } + + H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL); + + for (int j = 0; j < dims.length; j++) + lsize *= dims[j]; + + // Read Integer data + ArrayList[] base_vl_readbuf = new ArrayList[4]; + for (int j = 0; j < lsize; j++) + base_vl_readbuf[j] = new ArrayList<ArrayList<Integer>>(); + + try { + H5.H5Aread(attr_int_id, base_atype_int_id, base_vl_readbuf); + } + catch (Exception ex) { + ex.printStackTrace(); + } + ArrayList vl_readbuf = (ArrayList)base_vl_readbuf[0]; + assertTrue("vl_readbuf exists", vl_readbuf != null); + assertTrue("vl_readbuf has size " + vl_readbuf.size(), vl_readbuf.size() > 0); + ArrayList vl_readbuf_int = (ArrayList)vl_readbuf.get(0); + assertTrue("testH5AVLwrVL:" + vl_readbuf_int.get(0), + vl_int_data[0].get(0).equals(vl_readbuf_int.get(0))); + + vl_readbuf = (ArrayList)base_vl_readbuf[1]; + vl_readbuf_int = (ArrayList)vl_readbuf.get(1); + assertTrue("testH5AVLwrVL:" + vl_readbuf_int.get(0), + vl_int_data[1].get(0).equals(vl_readbuf_int.get(0))); + + vl_readbuf = (ArrayList)base_vl_readbuf[2]; + vl_readbuf_int = (ArrayList)vl_readbuf.get(2); + assertTrue("testH5AVLwrVL:" + vl_readbuf_int.get(0), + vl_int_data[2].get(0).equals(vl_readbuf_int.get(0))); + + vl_readbuf = (ArrayList)base_vl_readbuf[3]; + vl_readbuf_int = (ArrayList)vl_readbuf.get(3); + assertTrue("testH5AVLwrVL:" + vl_readbuf_int.get(0), + vl_int_data[3].get(0).equals(vl_readbuf_int.get(0))); + } + catch (Throwable err) { + err.printStackTrace(); + fail("H5.testH5AVLwrVL: " + err); + } + finally { + if (attr_int_id > 0) + try { + H5.H5Aclose(attr_int_id); + } + catch (Exception ex) { + } + if (atype_int_id > 0) + try { + H5.H5Tclose(atype_int_id); + } + catch (Exception ex) { + } + if (base_atype_int_id > 0) + try { + H5.H5Tclose(base_atype_int_id); + } + catch (Exception ex) { + } + } + } } |