diff options
Diffstat (limited to 'java/test/TestH5F.java')
| -rw-r--r-- | java/test/TestH5F.java | 332 |
1 files changed, 332 insertions, 0 deletions
diff --git a/java/test/TestH5F.java b/java/test/TestH5F.java new file mode 100644 index 0000000..3451187 --- /dev/null +++ b/java/test/TestH5F.java @@ -0,0 +1,332 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the files COPYING and Copyright.html. COPYING can be found at the root * + * of the source code distribution tree; Copyright.html can be found at the * + * root level of an installed copy of the electronic HDF5 document set and * + * is linked from the top-level documents page. It can also be found at * + * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * + * access to either file, you may request a copy from help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +package test; + +import static org.junit.Assert.assertEquals; +import static org.junit.Assert.assertTrue; +import static org.junit.Assert.fail; + +import java.io.File; + +import hdf.hdf5lib.H5; +import hdf.hdf5lib.HDF5Constants; +import hdf.hdf5lib.exceptions.HDF5LibraryException; + +import org.junit.After; +import org.junit.Before; +import org.junit.Rule; +import org.junit.Test; +import org.junit.rules.TestName; + +public class TestH5F { + @Rule public TestName testname = new TestName(); + private static final String H5_FILE = "test.h5"; + + private static final int COUNT_OBJ_FILE = 1; + private static final int COUNT_OBJ_DATASET = 0; + private static final int COUNT_OBJ_GROUP = 0; + private static final int COUNT_OBJ_DATATYPE = 0; + private static final int COUNT_OBJ_ATTR = 0; + private static final int COUNT_OBJ_ALL = (COUNT_OBJ_FILE + + COUNT_OBJ_DATASET + COUNT_OBJ_GROUP + COUNT_OBJ_DATATYPE + COUNT_OBJ_ATTR); + private static final int[] OBJ_COUNTS = { COUNT_OBJ_FILE, + COUNT_OBJ_DATASET, COUNT_OBJ_GROUP, COUNT_OBJ_DATATYPE, + COUNT_OBJ_ATTR, COUNT_OBJ_ALL }; + private static final int[] OBJ_TYPES = { HDF5Constants.H5F_OBJ_FILE, + HDF5Constants.H5F_OBJ_DATASET, HDF5Constants.H5F_OBJ_GROUP, + HDF5Constants.H5F_OBJ_DATATYPE, HDF5Constants.H5F_OBJ_ATTR, + HDF5Constants.H5F_OBJ_ALL }; + long H5fid = -1; + + private final void _deleteFile(String filename) { + File file = new File(filename); + + if (file.exists()) { + try {file.delete();} catch (SecurityException e) {} + } + } + + @Before + public void createH5file() + throws HDF5LibraryException, NullPointerException { + assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0); + System.out.print(testname.getMethodName()); + + H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, + HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT); + H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL); + } + + @After + public void deleteH5file() throws HDF5LibraryException { + if (H5fid > 0) { + try {H5.H5Fclose(H5fid);} catch (Exception ex) {} + H5fid = -1; + } + _deleteFile(H5_FILE); + System.out.println(); + } + + @Test + public void testH5Fget_create_plist() { + long plist = -1; + + try { + plist = H5.H5Fget_create_plist(H5fid); + } + catch (Throwable err) { + fail("H5.H5Fget_create_plist: " + err); + } + assertTrue(plist > 0); + try {H5.H5Pclose(plist);} catch (HDF5LibraryException e) {e.printStackTrace();} + } + + @Test(expected = HDF5LibraryException.class) + public void testH5Fget_create_plist_closed() throws Throwable { + long fid = -1; + + if (H5fid > 0) { + try {H5.H5Fclose(H5fid);} catch (Exception ex) {} + H5fid = -1; + } + + try { + fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, + HDF5Constants.H5P_DEFAULT); + } + catch (Throwable err) { + fail("H5.H5Fopen: " + err); + } + try { + H5.H5Fclose(fid); + } + catch (Exception ex) { + } + + // it should fail because the file was closed. + H5.H5Fget_create_plist(fid); + } + + @Test + public void testH5Fget_access_plist() { + long plist = -1; + + try { + plist = H5.H5Fget_access_plist(H5fid); + } + catch (Throwable err) { + fail("H5.H5Fget_access_plist: " + err); + } + assertTrue(plist > 0); + try {H5.H5Pclose(plist);} catch (HDF5LibraryException e) {e.printStackTrace();} + } + + @Test(expected = HDF5LibraryException.class) + public void testH5Fget_access_plist_closed() throws Throwable { + long fid = -1; + + if (H5fid > 0) { + try {H5.H5Fclose(H5fid);} catch (Exception ex) {} + H5fid = -1; + } + + try { + fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, + HDF5Constants.H5P_DEFAULT); + } + catch (Throwable err) { + fail("H5.H5Fopen: " + err); + } + try { + H5.H5Fclose(fid); + } + catch (Exception ex) { + } + + // it should fail because the file was closed. + H5.H5Fget_access_plist(fid); + } + + @Test + public void testH5Fget_intent_rdwr() { + int intent = 0; + long fid = -1; + + if (H5fid > 0) { + try {H5.H5Fclose(H5fid);} catch (Exception ex) {} + H5fid = -1; + } + + try { + fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDWR, + HDF5Constants.H5P_DEFAULT); + } + catch (Throwable err) { + fail("H5.H5Fopen: " + err); + } + try { + intent = H5.H5Fget_intent(fid); + } + catch (Throwable err) { + fail("H5.H5Fget_intent: " + err); + } + assertEquals(HDF5Constants.H5F_ACC_RDWR, intent); + + try { + H5.H5Fclose(fid); + } + catch (Exception ex) { + } + } + + @Test + public void testH5Fget_intent_rdonly() { + int intent = 0; + long fid = -1; + + if (H5fid > 0) { + try {H5.H5Fclose(H5fid);} catch (Exception ex) {} + H5fid = -1; + } + + try { + fid = H5.H5Fopen(H5_FILE, HDF5Constants.H5F_ACC_RDONLY, + HDF5Constants.H5P_DEFAULT); + } + catch (Throwable err) { + fail("H5.H5Fopen: " + err); + } + try { + intent = H5.H5Fget_intent(fid); + } + catch (Throwable err) { + fail("H5.H5Fget_intent: " + err); + } + assertEquals(HDF5Constants.H5F_ACC_RDONLY, intent); + + try { + H5.H5Fclose(fid); + } + catch (Exception ex) { + } + } + + @Test + public void testH5Fget_obj_count() { + long count = -1; + + for (int i = 0; i < OBJ_TYPES.length; i++) { + try { + count = H5.H5Fget_obj_count(H5fid, OBJ_TYPES[i]); + } + catch (Throwable err) { + fail("H5.H5Fget_obj_count: " + err); + } + + assertEquals(count, OBJ_COUNTS[i]); + } + } + + @Test + public void testH5Fget_obj_ids() { + long count = 0; + long max_objs = 100; + long[] obj_id_list = new long[(int)max_objs]; + int[] open_obj_counts = new int[OBJ_TYPES.length]; + + for (int i = 0; i < OBJ_TYPES.length; i++) + open_obj_counts[i] = 0; + + open_obj_counts[0] = 1; + for (int i = 0; i < OBJ_TYPES.length - 1; i++) + open_obj_counts[OBJ_TYPES.length - 1] += open_obj_counts[i]; + + for (int i = 0; i < OBJ_TYPES.length; i++) { + try { + count = H5.H5Fget_obj_ids(H5fid, OBJ_TYPES[i], max_objs, + obj_id_list); + } + catch (Throwable err) { + fail("H5.H5Fget_obj_ids: " + err); + } + assertEquals(count, open_obj_counts[i]); + } + } + /** + * TODO: need to add objects to the file after H5G[D,T]create() functions + * are implemented. + */ + // + // @Test + // public void testH5Fmount_unmount() { + // String file1 = "src.h5"; + // String file2 = "dst.h5"; + // String group1 = "/G"; + // String group2 = "/MOUNTED"; + // + // _createH5File(file1); + // _createH5File(file2); + // + // int fid1 = _openFile(file1, HDF5Constants.H5F_ACC_RDWR); + // assertTrue(fid1 > 0); + // + // int fid2 = _openFile(file2, HDF5Constants.H5F_ACC_RDWR); + // assertTrue(fid2 > 0); + // + // // create a group at file1 + // int gid = _createGroup(fid1, group1); + // try { H5.H5Gclose(gid); } catch (Exception ex) {} + // + // // create a group at file 2 + // gid = _createGroup(fid2, group2); + // try { H5.H5Gclose(gid); } catch (Exception ex) {} + // + // // before mount, "/G/MOUNTED" does not exists in file1 + // gid = _openGroup(fid1, group1+group2); + // assertTrue(gid < 0); + // + // // Mount file2 under G in the file1 + // try { + // H5.H5Fmount(fid1, group1, fid2, HDF5Constants.H5P_DEFAULT); + // } + // catch (Throwable err) { + // fail("H5.H5Fmount: "+err); + // } + // + // // now file1 should have group "/G/MOUNTED" + // gid = _openGroup(fid1, group1+group2); + // assertTrue(gid > 0); + // try { H5.H5Gclose(gid); } catch (Exception ex) {} + // + // // unmount file2 from file1 + // try { + // H5.H5Funmount(fid1, group1); + // } + // catch (Throwable err) { + // fail("H5.H5Funmount: "+err); + // } + // + // // file2 was unmounted from file1, "/G/MOUNTED" does not exists in file1 + // gid = _openGroup(fid1, group1+group2); + // assertTrue(gid < 0); + // + // try { H5.H5Fclose(fid1); } catch (Exception ex) {} + // try { H5.H5Fclose(fid2); } catch (Exception ex) {} + // + // _deleteFile(file1); + // _deleteFile(file2); + // } +} |