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-rw-r--r--java/test/TestH5R.java414
1 files changed, 231 insertions, 183 deletions
diff --git a/java/test/TestH5R.java b/java/test/TestH5R.java
index 031b8e4..4e610bc 100644
--- a/java/test/TestH5R.java
+++ b/java/test/TestH5R.java
@@ -23,8 +23,8 @@ import java.io.File;
import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
import hdf.hdf5lib.exceptions.HDF5Exception;
-import hdf.hdf5lib.exceptions.HDF5LibraryException;
import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
import org.junit.After;
import org.junit.Before;
@@ -34,38 +34,46 @@ import org.junit.Test;
import org.junit.rules.TestName;
public class TestH5R {
- @Rule public TestName testname = new TestName();
+ @Rule
+ public TestName testname = new TestName();
private static final String H5_FILE = "testH5R.h5";
- private static final int DIM_X = 4;
- private static final int DIM_Y = 6;
- long H5fid = HDF5Constants.H5I_INVALID_HID;
- long H5dsid = HDF5Constants.H5I_INVALID_HID;
- long H5did = HDF5Constants.H5I_INVALID_HID;
- long H5gid = HDF5Constants.H5I_INVALID_HID;
- long H5did2 = HDF5Constants.H5I_INVALID_HID;
- long[] H5dims = { DIM_X, DIM_Y };
- int[][] dset_data = new int[DIM_X][DIM_Y];
- int FILLVAL = 99;
-
- private final void _deleteFile(String filename) {
+ private static final int DIM_X = 4;
+ private static final int DIM_Y = 6;
+ long H5fid = HDF5Constants.H5I_INVALID_HID;
+ long H5dsid = HDF5Constants.H5I_INVALID_HID;
+ long H5did = HDF5Constants.H5I_INVALID_HID;
+ long H5gid = HDF5Constants.H5I_INVALID_HID;
+ long H5did2 = HDF5Constants.H5I_INVALID_HID;
+ long[] H5dims = {DIM_X, DIM_Y};
+ int[][] dset_data = new int[DIM_X][DIM_Y];
+ int FILLVAL = 99;
+
+ private final void _deleteFile(String filename)
+ {
File file = null;
try {
file = new File(filename);
}
- catch (Throwable err) {}
+ catch (Throwable err) {
+ }
if (file.exists()) {
- try {file.delete();} catch (SecurityException e) {e.printStackTrace();}
+ try {
+ file.delete();
+ }
+ catch (SecurityException e) {
+ e.printStackTrace();
+ }
}
assertFalse("TestH5R._deleteFile file still exists ", file.exists());
}
- private final long _createDataset(long fid, long dsid, String name, long dapl) {
+ private final long _createDataset(long fid, long dsid, String name, long dapl)
+ {
long did = HDF5Constants.H5I_INVALID_HID;
try {
- did = H5.H5Dcreate(fid, name,
- HDF5Constants.H5T_STD_I32BE, dsid,
- HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+ did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32BE, dsid, HDF5Constants.H5P_DEFAULT,
+ HDF5Constants.H5P_DEFAULT, dapl);
}
catch (Throwable err) {
err.printStackTrace();
@@ -76,34 +84,35 @@ public class TestH5R {
return did;
}
- private final long _createGroup(long fid, String name) {
+ private final long _createGroup(long fid, String name)
+ {
long gid = HDF5Constants.H5I_INVALID_HID;
try {
- gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT,
- HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+ gid = H5.H5Gcreate(fid, name, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT,
+ HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
fail("H5.H5Gcreate: " + err);
}
- assertTrue("TestH5R._createGroup: ",gid > 0);
+ assertTrue("TestH5R._createGroup: ", gid > 0);
return gid;
}
@Before
- public void createH5file()
- throws NullPointerException, HDF5Exception {
- assertTrue("H5 open ids is 0",H5.getOpenIDCount()==0);
+ public void createH5file() throws NullPointerException, HDF5Exception
+ {
+ assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
System.out.print(testname.getMethodName());
try {
- H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
- HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+ H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC, HDF5Constants.H5P_DEFAULT,
+ HDF5Constants.H5P_DEFAULT);
H5dsid = H5.H5Screate_simple(2, H5dims, null);
- H5gid = _createGroup(H5fid, "Group1");
+ H5gid = _createGroup(H5fid, "Group1");
H5did2 = _createDataset(H5gid, H5dsid, "dset2", HDF5Constants.H5P_DEFAULT);
- H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+ H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
// Initialize the dataset.
for (int indx = 0; indx < DIM_X; indx++)
@@ -112,38 +121,57 @@ public class TestH5R {
try {
if (H5did >= 0)
- H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
- HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
- HDF5Constants.H5P_DEFAULT, dset_data[0]);
+ H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5S_ALL, HDF5Constants.H5P_DEFAULT, dset_data[0]);
}
catch (Exception e) {
e.printStackTrace();
}
-
}
catch (Throwable err) {
err.printStackTrace();
fail("TestH5R.createH5file: " + err);
}
- assertTrue("TestH5R.createH5file: H5.H5Fcreate: ",H5fid > 0);
- assertTrue("TestH5R.createH5file: H5.H5Screate_simple: ",H5dsid > 0);
- assertTrue("TestH5R.createH5file: _createDataset: ",H5did > 0);
+ assertTrue("TestH5R.createH5file: H5.H5Fcreate: ", H5fid > 0);
+ assertTrue("TestH5R.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+ assertTrue("TestH5R.createH5file: _createDataset: ", H5did > 0);
H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
}
@After
- public void deleteH5file() throws HDF5LibraryException {
+ public void deleteH5file() throws HDF5LibraryException
+ {
if (H5dsid > 0)
- try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+ try {
+ H5.H5Sclose(H5dsid);
+ }
+ catch (Exception ex) {
+ }
if (H5did > 0)
- try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+ try {
+ H5.H5Dclose(H5did);
+ }
+ catch (Exception ex) {
+ }
if (H5fid > 0)
- try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+ try {
+ H5.H5Fclose(H5fid);
+ }
+ catch (Exception ex) {
+ }
if (H5gid > 0)
- try {H5.H5Gclose(H5gid);} catch (Exception ex) {}
+ try {
+ H5.H5Gclose(H5gid);
+ }
+ catch (Exception ex) {
+ }
if (H5did2 > 0)
- try {H5.H5Dclose(H5did2);} catch (Exception ex) {}
+ try {
+ H5.H5Dclose(H5did2);
+ }
+ catch (Exception ex) {
+ }
_deleteFile(H5_FILE);
System.out.println();
@@ -152,11 +180,12 @@ public class TestH5R {
// Test v1.12 APIs params
@Test
- public void testH5Rget_object() {
- int ref_type = HDF5Constants.H5R_OBJECT2;
- long ret_val = -1;
- byte[] ref = null;
- String name = "";
+ public void testH5Rget_object()
+ {
+ int ref_type = HDF5Constants.H5R_OBJECT2;
+ long ret_val = -1;
+ byte[] ref = null;
+ String name = "";
String objName = "/dset";
try {
@@ -197,9 +226,10 @@ public class TestH5R {
}
@Test
- public void testH5Rget_obj_type3() {
- int obj_type = -1;
- byte[] ref = null;
+ public void testH5Rget_obj_type3()
+ {
+ int obj_type = -1;
+ byte[] ref = null;
String objName = "/dset";
try {
@@ -222,13 +252,14 @@ public class TestH5R {
}
@Test
- public void testH5Rcreate_regionref_object() {
- byte[] ref = null;
+ public void testH5Rcreate_regionref_object()
+ {
+ byte[] ref = null;
String objName = "/dset";
- long start[] = {2,2}; // Starting location of hyperslab
- long stride[] = {1,1}; // Stride of hyperslab
- long count[] = {1,1}; // Element count of hyperslab
- long block[] = {3,3}; // Block size of hyperslab
+ long start[] = {2, 2}; // Starting location of hyperslab
+ long stride[] = {1, 1}; // Stride of hyperslab
+ long count[] = {1, 1}; // Element count of hyperslab
+ long block[] = {3, 3}; // Block size of hyperslab
// Select 3x3 hyperslab for reference
try {
@@ -249,235 +280,252 @@ public class TestH5R {
H5.H5Rdestroy(ref);
}
-// These tests need to be updated with new APIs
-// @Test//
-// public void testH5Rget_group() {
-// long loc_id = H5fid;
-// int ref_type = HDF5Constants.H5R_OBJECT2;
-// long ret_val = -1;
-// byte[] ref = null;
-// String name = "";
-// String objName = "/dset";
-//
-// try {
-// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("testH5Rget_object: H5Rcreate_object " + err);
-// }
-// try {
-// dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
-//
-// //Create reference on group
-// ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
-// group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
-// assertNotNull(ref1);
-// assertNotNull(ref2);
-// assertTrue(dataset_id >= 0);
-// assertTrue(group_id >= 0);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("TestH5Rdereference " + err);
-// }
-// finally {
-// try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
-// try {H5.H5Gclose(group_id);} catch (Exception ex) {}
-// }
-// }
-
-// @Test//
-// public void testH5Rget_region_dataset() {
-// long loc_id = H5fid;
-// int ref_type = HDF5Constants.H5R_OBJECT2;
-// long ret_val = -1;
-// byte[] ref = null;
-// String name = "";
-// String objName = "/dset";
-//
-// try {
-// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("testH5Rget_object: H5Rcreate_object " + err);
-// }
-// try {
-// dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
-// assertNotNull(ref);
-// assertTrue(dsid >= 0);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("TestH5Rget_region: " + err);
-// }
-// finally {
-// try {H5.H5Sclose(dsid);} catch (Exception ex) {}
-// }
-// }
-
-// @Test//
-// public void testH5Rget_attr() {
-// long loc_id = H5fid;
-// int ref_type = HDF5Constants.H5R_OBJECT2;
-// long ret_val = -1;
-// byte[] ref = null;
-// String name = "";
-// String objName = "/dset";
-//
-// try {
-// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("testH5Rget_object: H5Rcreate_object " + err);
-// }
-// try {
-// dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
-// assertNotNull(ref);
-// assertTrue(dsid >= 0);
-// }
-// catch (Throwable err) {
-// err.printStackTrace();
-// fail("TestH5Rget_region: " + err);
-// }
-// finally {
-// try {H5.H5Sclose(dsid);} catch (Exception ex) {}
-// }
-// }
+ // These tests need to be updated with new APIs
+ // @Test//
+ // public void testH5Rget_group() {
+ // long loc_id = H5fid;
+ // int ref_type = HDF5Constants.H5R_OBJECT2;
+ // long ret_val = -1;
+ // byte[] ref = null;
+ // String name = "";
+ // String objName = "/dset";
+ //
+ // try {
+ // ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("testH5Rget_object: H5Rcreate_object " + err);
+ // }
+ // try {
+ // dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT,
+ // HDF5Constants.H5R_DATASET_REGION, ref1);
+ //
+ // //Create reference on group
+ // ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+ // group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT,
+ // ref2); assertNotNull(ref1); assertNotNull(ref2); assertTrue(dataset_id >= 0);
+ // assertTrue(group_id >= 0);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("TestH5Rdereference " + err);
+ // }
+ // finally {
+ // try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
+ // try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+ // }
+ // }
+
+ // @Test//
+ // public void testH5Rget_region_dataset() {
+ // long loc_id = H5fid;
+ // int ref_type = HDF5Constants.H5R_OBJECT2;
+ // long ret_val = -1;
+ // byte[] ref = null;
+ // String name = "";
+ // String objName = "/dset";
+ //
+ // try {
+ // ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("testH5Rget_object: H5Rcreate_object " + err);
+ // }
+ // try {
+ // dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+ // assertNotNull(ref);
+ // assertTrue(dsid >= 0);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("TestH5Rget_region: " + err);
+ // }
+ // finally {
+ // try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+ // }
+ // }
+
+ // @Test//
+ // public void testH5Rget_attr() {
+ // long loc_id = H5fid;
+ // int ref_type = HDF5Constants.H5R_OBJECT2;
+ // long ret_val = -1;
+ // byte[] ref = null;
+ // String name = "";
+ // String objName = "/dset";
+ //
+ // try {
+ // ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("testH5Rget_object: H5Rcreate_object " + err);
+ // }
+ // try {
+ // dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+ // assertNotNull(ref);
+ // assertTrue(dsid >= 0);
+ // }
+ // catch (Throwable err) {
+ // err.printStackTrace();
+ // fail("TestH5Rget_region: " + err);
+ // }
+ // finally {
+ // try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+ // }
+ // }
// Test parameters to H5Rcreate_object
@Test(expected = NullPointerException.class)
- public void testH5Rcreate_object_Nullname() throws Throwable {
+ public void testH5Rcreate_object_Nullname() throws Throwable
+ {
String name = null;
H5.H5Rcreate_object(H5fid, name, HDF5Constants.H5P_DEFAULT);
}
@Test(expected = HDF5FunctionArgumentException.class)
- public void testH5Rget_name_Invalidloc() throws Throwable {
- String name= "";
+ public void testH5Rget_name_Invalidloc() throws Throwable
+ {
+ String name = "";
H5.H5Rcreate_object(-1, name, HDF5Constants.H5P_DEFAULT);
}
// Test parameters to H5Rcreate_region
@Test(expected = NullPointerException.class)
- public void testH5Rcreate_region_Nullname() throws Throwable {
+ public void testH5Rcreate_region_Nullname() throws Throwable
+ {
String name = null;
H5.H5Rcreate_region(H5fid, name, -1, HDF5Constants.H5P_DEFAULT);
}
@Test(expected = HDF5FunctionArgumentException.class)
- public void testH5Rcreate_region_Invalidloc() throws Throwable {
- String name= "";
+ public void testH5Rcreate_region_Invalidloc() throws Throwable
+ {
+ String name = "";
H5.H5Rcreate_region(-1, name, -1, HDF5Constants.H5P_DEFAULT);
}
// Test parameters to H5Rcreate_attr
@Test(expected = NullPointerException.class)
- public void testH5Rcreate_attr_Nullname() throws Throwable {
- String name = null;
+ public void testH5Rcreate_attr_Nullname() throws Throwable
+ {
+ String name = null;
String attrname = "";
H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
}
@Test(expected = NullPointerException.class)
- public void testH5Rcreate_attr_Nullattrname() throws Throwable {
- String name = "";
+ public void testH5Rcreate_attr_Nullattrname() throws Throwable
+ {
+ String name = "";
String attrname = null;
H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
}
@Test(expected = HDF5FunctionArgumentException.class)
- public void testH5Rcreate_attr_Invalidloc() throws Throwable {
- String name= "";
- String attrname= "";
+ public void testH5Rcreate_attr_Invalidloc() throws Throwable
+ {
+ String name = "";
+ String attrname = "";
H5.H5Rcreate_attr(-1, name, attrname, HDF5Constants.H5P_DEFAULT);
}
// Test parameters to H5Rdestroy
@Test(expected = NullPointerException.class)
- public void testH5Rdestroy_Nullref() throws Throwable {
+ public void testH5Rdestroy_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rdestroy(ref);
}
// Test parameters to H5Rget_type
@Test(expected = NullPointerException.class)
- public void testH5Rget_type_Nullref() throws Throwable {
+ public void testH5Rget_type_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rget_type(ref);
}
// Test parameters to H5Requal
@Test(expected = NullPointerException.class)
- public void testH5Requal_Nullref1() throws Throwable {
+ public void testH5Requal_Nullref1() throws Throwable
+ {
byte[] ref1 = null;
- byte[] ref2 = {0,0,0,0};
+ byte[] ref2 = {0, 0, 0, 0};
H5.H5Requal(ref1, ref2);
}
@Test(expected = NullPointerException.class)
- public void testH5Requal_Nullref2() throws Throwable {
- byte[] ref1 = {0,0,0,0};
+ public void testH5Requal_Nullref2() throws Throwable
+ {
+ byte[] ref1 = {0, 0, 0, 0};
byte[] ref2 = null;
H5.H5Requal(ref1, ref2);
}
// Test parameters to H5Rcopy
@Test(expected = NullPointerException.class)
- public void testH5Rcopy_Nullref1() throws Throwable {
+ public void testH5Rcopy_Nullref1() throws Throwable
+ {
byte[] ref1 = null;
byte[] ref2 = H5.H5Rcopy(ref1);
}
// Test parameters to H5Ropen_object
@Test(expected = NullPointerException.class)
- public void testH5Ropen_object_Nullref() throws Throwable {
+ public void testH5Ropen_object_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Ropen_object(ref, -1, -1);
}
// Test parameters to H5Ropen_region
@Test(expected = NullPointerException.class)
- public void testH5Ropen_region_Nullref() throws Throwable {
+ public void testH5Ropen_region_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Ropen_region(ref, -1, -1);
}
// Test parameters to H5Ropen_attr
@Test(expected = NullPointerException.class)
- public void testH5Ropen_attr_Nullref() throws Throwable {
+ public void testH5Ropen_attr_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Ropen_attr(ref, -1, -1);
}
// Test parameters to H5Rget_obj_type3
@Test(expected = NullPointerException.class)
- public void testH5Rget_obj_type3_Nullref() throws Throwable {
+ public void testH5Rget_obj_type3_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rget_obj_type3(ref, -1);
}
// Test parameters to H5Rget_file_name
@Test(expected = NullPointerException.class)
- public void testH5Rget_file_name_Nullref() throws Throwable {
+ public void testH5Rget_file_name_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rget_file_name(ref);
}
// Test parameters to H5Rget_obj_name
@Test(expected = NullPointerException.class)
- public void testH5Rget_obj_name_Nullref() throws Throwable {
+ public void testH5Rget_obj_name_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rget_obj_name(ref, -1);
}
// Test parameters to H5Rget_attr_name
@Test(expected = NullPointerException.class)
- public void testH5Rget_attr_name_Nullref() throws Throwable {
+ public void testH5Rget_attr_name_Nullref() throws Throwable
+ {
byte[] ref = null;
H5.H5Rget_attr_name(ref);
}
-
}
generated by cgit v0.12 at 2024-10-30 14:30:42 (GMT)