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-rw-r--r--java/test/TestH5.java143
-rw-r--r--java/test/TestH5Edefault.java2
-rw-r--r--java/test/TestH5R.java486
-rw-r--r--java/test/testfiles/JUnit-TestH5.txt3
-rw-r--r--java/test/testfiles/JUnit-TestH5R.txt41
5 files changed, 539 insertions, 136 deletions
diff --git a/java/test/TestH5.java b/java/test/TestH5.java
index 2bee075..9b2a1d3 100644
--- a/java/test/TestH5.java
+++ b/java/test/TestH5.java
@@ -22,12 +22,17 @@ import java.io.ByteArrayOutputStream;
import java.io.File;
import java.io.FileInputStream;
import java.io.FileOutputStream;
+import java.io.FileReader;
+import java.io.FileNotFoundException;
import java.io.IOException;
import java.io.ObjectInputStream;
import java.io.ObjectOutputStream;
+import java.io.Reader;
+import java.io.StreamTokenizer;
import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
import org.junit.After;
import org.junit.Before;
@@ -50,6 +55,81 @@ public class TestH5 {
public void nextTestName() {
System.out.println();
}
+ private static final String H5_FILE = "testData.h5";
+ private static final String EXPORT_FILE = "testExport.txt";
+ private static final int DIM_X = 4;
+ private static final int DIM_Y = 6;
+ private static final int RANK = 2;
+ long H5fid = -1;
+ long H5dsid = -1;
+ long H5did = -1;
+ long[] H5dims = { DIM_X, DIM_Y };
+
+ private final void _deleteFile(String filename) {
+ File file = null;
+ try {
+ file = new File(filename);
+ }
+ catch (Throwable err) {}
+
+ if (file.exists()) {
+ try {file.delete();} catch (SecurityException e) {}
+ }
+ }
+
+ private final long _createDataset(long fid, long dsid, String name, long dapl) {
+ long did = -1;
+ try {
+ did = H5.H5Dcreate(fid, name, HDF5Constants.H5T_STD_I32LE, dsid,
+ HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT, dapl);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("H5.H5Dcreate: " + err);
+ }
+ assertTrue("TestH5._createDataset: ", did > 0);
+
+ return did;
+ }
+
+ private final void _createH5File() {
+ try {
+ H5fid = H5.H5Fcreate(H5_FILE, HDF5Constants.H5F_ACC_TRUNC,
+ HDF5Constants.H5P_DEFAULT, HDF5Constants.H5P_DEFAULT);
+ H5dsid = H5.H5Screate_simple(2, H5dims, null);
+ H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createH5file: " + err);
+ }
+ assertTrue("TestH5.createH5file: H5.H5Fcreate: ", H5fid > 0);
+ assertTrue("TestH5.createH5file: H5.H5Screate_simple: ", H5dsid > 0);
+ assertTrue("TestH5.createH5file: _createDataset: ", H5did > 0);
+
+ try {
+ H5.H5Fflush(H5fid, HDF5Constants.H5F_SCOPE_LOCAL);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ }
+ }
+
+ public final void _closeH5File() throws HDF5LibraryException {
+ if (H5did >= 0)
+ try {H5.H5Dclose(H5did);} catch (Exception ex) {}
+ if (H5dsid > 0)
+ try {H5.H5Sclose(H5dsid);} catch (Exception ex) {}
+ if (H5fid > 0)
+ try {H5.H5Fclose(H5fid);} catch (Exception ex) {}
+ H5fid = -1;
+ H5dsid = -1;
+ H5did = -1;
+ }
+
+ public final void _deleteH5file() {
+ _deleteFile(H5_FILE);
+ }
/**
* Test method for {@link hdf.hdf5lib.H5#J2C(int)}.
@@ -268,4 +348,67 @@ public class TestH5 {
fail("Exception thrown during test: " + ex.toString());
}
}
+
+ @Test
+ public void testH5export_dataset() {
+ int[][] dset_data = new int[DIM_X][DIM_Y];
+ int[][] dset_indata = new int[DIM_X][DIM_Y];
+ int FILLVAL = 99;
+
+ _createH5File();
+
+ // Initialize the dataset.
+ for (int indx = 0; indx < DIM_X; indx++)
+ for (int jndx = 0; jndx < DIM_Y; jndx++)
+ dset_data[indx][jndx] = FILLVAL;
+
+ try {
+ if (H5did >= 0)
+ H5.H5Dwrite(H5did, HDF5Constants.H5T_STD_I32LE,
+ HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5P_DEFAULT, dset_data);
+ }
+ catch (Exception e) {
+ e.printStackTrace();
+ }
+
+ _closeH5File();
+
+ try {
+ H5.H5export_dataset(EXPORT_FILE, H5_FILE, "/dset", 99);
+ }
+ catch (HDF5LibraryException err) {
+ err.printStackTrace();
+ fail("H5export_dataset failed: " + err);
+ }
+
+ File file = new File(EXPORT_FILE);
+
+ try {
+ Reader reader = new FileReader(EXPORT_FILE);
+ StreamTokenizer streamTokenizer = new StreamTokenizer(reader);
+ int indx = 0;
+ int jndx = 0;
+ while(streamTokenizer.nextToken() != StreamTokenizer.TT_EOF){
+ if(streamTokenizer.ttype == StreamTokenizer.TT_NUMBER) {
+ dset_indata[indx][jndx] = (int)streamTokenizer.nval;
+ jndx++;
+ if (jndx >= DIM_Y) {
+ jndx = 0;
+ indx++;
+ }
+ }
+ }
+ reader.close();
+ }
+ catch (IOException err) {
+ err.printStackTrace();
+ fail("read file failed: " + err);
+ }
+ for(int row = 0; row < DIM_X; row++)
+ for(int col = 0; col < DIM_Y; col++) {
+ assertTrue("H5export_dataset: <"+row+","+col+">"+dset_indata[row][col]+"=99", dset_indata[row][col]==99);
+ }
+ _deleteH5file();
+ }
}
diff --git a/java/test/TestH5Edefault.java b/java/test/TestH5Edefault.java
index ee2850b..6f968b1 100644
--- a/java/test/TestH5Edefault.java
+++ b/java/test/TestH5Edefault.java
@@ -366,7 +366,7 @@ public class TestH5Edefault {
}
assertTrue("H5.H5Eset_current_stack: get_num #:" + num_msg, num_msg == saved_num_msg);
- // Se the current stack to be the default and try that again
+ // Set the current stack to be the default and try that again
try {
H5.H5Eset_current_stack(stack_id);
num_msg = H5.H5Eget_num(HDF5Constants.H5E_DEFAULT);
diff --git a/java/test/TestH5R.java b/java/test/TestH5R.java
index 5349855..7b9f538 100644
--- a/java/test/TestH5R.java
+++ b/java/test/TestH5R.java
@@ -14,6 +14,7 @@
package test;
import static org.junit.Assert.assertEquals;
+import static org.junit.Assert.assertFalse;
import static org.junit.Assert.assertNotNull;
import static org.junit.Assert.assertTrue;
import static org.junit.Assert.fail;
@@ -24,9 +25,11 @@ import hdf.hdf5lib.H5;
import hdf.hdf5lib.HDF5Constants;
import hdf.hdf5lib.exceptions.HDF5Exception;
import hdf.hdf5lib.exceptions.HDF5LibraryException;
+import hdf.hdf5lib.exceptions.HDF5FunctionArgumentException;
import org.junit.After;
import org.junit.Before;
+import org.junit.Ignore;
import org.junit.Rule;
import org.junit.Test;
import org.junit.rules.TestName;
@@ -42,6 +45,8 @@ public class TestH5R {
long H5gid = -1;
long H5did2 = -1;
long[] H5dims = { DIM_X, DIM_Y };
+ int[][] dset_data = new int[DIM_X][DIM_Y];
+ int FILLVAL = 99;
private final void _deleteFile(String filename) {
File file = null;
@@ -51,8 +56,9 @@ public class TestH5R {
catch (Throwable err) {}
if (file.exists()) {
- try {file.delete();} catch (SecurityException e) {}
+ try {file.delete();} catch (SecurityException e) {e.printStackTrace();}
}
+ assertFalse("TestH5R._deleteFile file still exists ", file.exists());
}
private final long _createDataset(long fid, long dsid, String name, long dapl) {
@@ -66,7 +72,7 @@ public class TestH5R {
err.printStackTrace();
fail("H5.H5Dcreate: " + err);
}
- assertTrue("TestH5R._createDataset: ",did > 0);
+ assertTrue("TestH5R._createDataset: ", did > 0);
return did;
}
@@ -100,6 +106,21 @@ public class TestH5R {
H5did2 = _createDataset(H5gid, H5dsid, "dset2", HDF5Constants.H5P_DEFAULT);
H5did = _createDataset(H5fid, H5dsid, "dset", HDF5Constants.H5P_DEFAULT);
+ // Initialize the dataset.
+ for (int indx = 0; indx < DIM_X; indx++)
+ for (int jndx = 0; jndx < DIM_Y; jndx++)
+ dset_data[indx][jndx] = FILLVAL;
+
+ try {
+ if (H5did >= 0)
+ H5.H5Dwrite(H5did, HDF5Constants.H5T_NATIVE_INT,
+ HDF5Constants.H5S_ALL, HDF5Constants.H5S_ALL,
+ HDF5Constants.H5P_DEFAULT, dset_data[0]);
+ }
+ catch (Exception e) {
+ e.printStackTrace();
+ }
+
}
catch (Throwable err) {
err.printStackTrace();
@@ -129,205 +150,438 @@ public class TestH5R {
System.out.println();
}
+ // Test v1.8 APIs params
+ /*
+ * @Ignore public void testH5Rget_name() { long loc_id = H5fid; int ref_type =
+ * HDF5Constants.H5R_OBJECT; long ret_val = -1; byte[] ref = null; String[] name = {""}; String
+ * objName = "/dset";
+ *
+ * try { ref = H5.H5Rcreate(H5fid, objName, ref_type, -1); } catch (Throwable err) {
+ * err.printStackTrace(); fail("H5.H5Rget_name:H5Rcreate " + err); }
+ *
+ * try { ret_val = H5.H5Rget_name(loc_id, ref_type, ref, name, 16); } catch (Throwable err) {
+ * err.printStackTrace(); fail("H5.H5Rget_name: " + err); }
+ *
+ * assertTrue("testH5Rget_name: H5Rget_name", ret_val>0); assertTrue("The name of the object: ",
+ * objName.equals(name[0])); }
+ *
+ * @Ignore public void testH5Rget_obj_type2() { int ref_type=HDF5Constants.H5R_OBJECT; byte[]
+ * ref=null;
+ *
+ * String objName = "/dset"; int obj_type = -1;
+ *
+ * try { ref = H5.H5Rcreate(H5fid, objName, ref_type, -1); } catch(Throwable err) {
+ * err.printStackTrace(); }
+ *
+ * try { obj_type = H5.H5Rget_obj_type(H5fid, HDF5Constants.H5R_OBJECT, ref); } catch (Throwable
+ * err) { err.printStackTrace(); fail("H5.H5Rget_obj_type2: " + err); } assertEquals(obj_type,
+ * HDF5Constants.H5O_TYPE_DATASET); }
+ *
+ * @Ignore public void testH5Rcreate_refobj() { byte[] ref = null;
+ *
+ * try { ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1); } catch (Throwable err) {
+ * err.printStackTrace(); fail("H5.H5Rcreate: " + err); } assertNotNull(ref); }
+ *
+ * @Ignore public void testH5Rcreate_regionrefobj() { byte[] ref = null; try { ref =
+ * H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); } catch (Throwable err) {
+ * err.printStackTrace(); fail("H5.H5Rcreate: " + err); } assertNotNull(ref); }
+ *
+ * @Ignore public void testH5Rdereference() { byte[] ref1 = null; byte[] ref2 = null; long
+ * dataset_id = -1; long group_id = -1; try { //Create reference on dataset ref1 =
+ * H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); dataset_id=
+ * H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
+ *
+ * //Create reference on group ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+ * group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
+ * assertNotNull(ref1); assertNotNull(ref2); assertTrue(dataset_id >= 0); assertTrue(group_id >= 0);
+ * } catch (Throwable err) { err.printStackTrace(); fail("TestH5Rdereference " + err); } finally {
+ * try {H5.H5Dclose(dataset_id);} catch (Exception ex) {} try {H5.H5Gclose(group_id);} catch
+ * (Exception ex) {} } }
+ *
+ * @Ignore public void testH5Rget_region() { byte[] ref = null; long dsid = -1; try { ref =
+ * H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); dsid =
+ * H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref); assertNotNull(ref);
+ * assertTrue(dsid >= 0); } catch (Throwable err) { err.printStackTrace();
+ * fail("TestH5Rget_region: " + err); } finally { try {H5.H5Sclose(dsid);} catch (Exception ex) {} }
+ * }
+ *
+ * @Ignore//(expected = IllegalArgumentException.class) public void testH5Rget_name_Invalidreftype()
+ * throws Throwable { byte[] ref = null; String[] name = {""}; ref = H5.H5Rcreate(H5fid, "/dset",
+ * HDF5Constants.H5R_OBJECT, -1); H5.H5Rget_name(H5fid, HDF5Constants.H5R_DATASET_REGION, ref, name,
+ * 16); }
+ *
+ * @Ignore//(expected = NullPointerException.class) public void testH5Rget_name_NULLreference()
+ * throws Throwable { byte[] ref = null; String[] name = {""}; H5.H5Rget_name(H5fid,
+ * HDF5Constants.H5R_OBJECT, ref, name, 16); }
+ *
+ * @Ignore//(expected = HDF5LibraryException.class) public void
+ * testH5Rget_obj_type2_Invalidreftype() throws Throwable { byte[] ref = null; ref =
+ * H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1); H5.H5Rget_obj_type(H5fid,
+ * HDF5Constants.H5R_DATASET_REGION, ref); }
+ *
+ * @Ignore//(expected = HDF5LibraryException.class) public void testH5Rcreate_InvalidObjectName()
+ * throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/GROUPS", HDF5Constants.H5R_OBJECT, -1); }
+ *
+ * @Ignore//(expected = HDF5LibraryException.class) public void testH5Rcreate_Invalidspace_id()
+ * throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, -1);
+ * }
+ *
+ * @Ignore//(expected = IllegalArgumentException.class) public void testH5Rcreate_Invalidreftype()
+ * throws Throwable { byte[] ref=H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_BADTYPE, -1); }
+ *
+ * @Ignore//(expected = IllegalArgumentException.class) public void
+ * testH5Rgetregion_Invalidreftype() throws Throwable { byte[] ref = null; ref = H5.H5Rcreate(H5fid,
+ * "/dset", HDF5Constants.H5R_OBJECT, H5dsid); H5.H5Rget_region(H5fid,
+ * HDF5Constants.H5R_DATASET_REGION, ref); }
+ *
+ * @Ignore//(expected = IllegalArgumentException.class) public void
+ * testH5Rgetregion_Badreferencetype() throws Throwable { byte[] ref = null; ref =
+ * H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, H5dsid); H5.H5Rget_region(H5fid,
+ * HDF5Constants.H5R_OBJECT, ref); }
+ *
+ * @Ignore//(expected = NullPointerException.class) public void testH5Rgetregion_Nullreference()
+ * throws Throwable { byte[] ref = null; H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION,
+ * ref); }
+ *
+ * @Ignore//(expected = NullPointerException.class) public void testH5Rdereference_Nullreference()
+ * throws Throwable { byte[] ref = null; H5.H5Rdereference(H5did2, HDF5Constants.H5P_DEFAULT,
+ * HDF5Constants.H5R_OBJECT, ref); }
+ *
+ * @Ignore//(expected = IllegalArgumentException.class) public void
+ * testH5Rdereference_Invalidreference() throws Throwable { byte[] ref1 = null; byte[] ref2 = null;
+ * ref1 = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid); ref2 =
+ * H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1); H5.H5Rdereference(H5gid,
+ * HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref1); }
+ */
+ // Test v1.12 APIs params
+
@Test
- public void testH5Rget_name() {
- long loc_id=H5fid;
- int ref_type=HDF5Constants.H5R_OBJECT;
- long ret_val=-1;
- byte[] ref=null;
- String[] name= {""};
+ public void testH5Rget_object() {
+ int ref_type = HDF5Constants.H5R_OBJECT2;
+ long ret_val = -1;
+ byte[] ref = null;
+ String name = "";
String objName = "/dset";
try {
- ref = H5.H5Rcreate(H5fid, objName, ref_type, -1);
+ ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
- fail("H5.H5Rget_name:H5Rcreate " + err);
+ fail("testH5Rget_object: H5Rcreate_object " + err);
}
try {
- ret_val = H5.H5Rget_name(loc_id, ref_type, ref, name, 16);
+ ret_val = H5.H5Rget_type(ref);
}
catch (Throwable err) {
err.printStackTrace();
- fail("H5.H5Rget_name: " + err);
+ fail("testH5Rget_object: H5Rget_type: " + err);
}
-
- assertTrue("testH5Rget_name: H5Rget_name", ret_val>0);
- assertTrue("The name of the object: ", objName.equals(name[0]));
- }
-
- @Test
- public void testH5Rget_obj_type2() {
- int ref_type=HDF5Constants.H5R_OBJECT;
- byte[] ref=null;
-
- String objName = "/dset";
- int obj_type = -1;;
+ assertTrue("testH5Rget_object: H5Rget_type", ret_val == ref_type);
try {
- ref = H5.H5Rcreate(H5fid, objName, ref_type, -1);
+ name = H5.H5Rget_file_name(ref);
}
- catch(Throwable err) {
+ catch (Throwable err) {
err.printStackTrace();
+ fail("testH5Rget_object: H5Rget_file_name: " + err);
}
+ assertTrue("testH5Rget_object: H5Rget_file_name", H5_FILE.equals(name));
try {
- obj_type = H5.H5Rget_obj_type(H5fid, HDF5Constants.H5R_OBJECT, ref);
+ name = H5.H5Rget_obj_name(ref, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
- fail("H5.H5Rget_obj_type2: " + err);
+ fail("testH5Rget_object: H5Rget_obj_name: " + err);
}
- assertEquals(obj_type, HDF5Constants.H5O_TYPE_DATASET);
+ assertTrue("The name of the object: ", objName.equals(name));
+ H5.H5Rdestroy(ref);
}
@Test
- public void testH5Rcreate_refobj() {
+ public void testH5Rget_obj_type3() {
+ int obj_type = -1;
byte[] ref = null;
+ String objName = "/dset";
try {
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1);
+ ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
- fail("H5.H5Rcreate: " + err);
+ fail("testH5Rget_obj_type3: H5Rcreate_object " + err);
}
- assertNotNull(ref);
- }
- @Test
- public void testH5Rcreate_regionrefobj() {
- byte[] ref = null;
try {
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid);
+ obj_type = H5.H5Rget_obj_type3(ref, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
- fail("H5.H5Rcreate: " + err);
+ fail("testH5Rget_obj_type3: H5.H5Rget_obj_type3: " + err);
}
- assertNotNull(ref);
+ assertEquals(obj_type, HDF5Constants.H5O_TYPE_DATASET);
+ H5.H5Rdestroy(ref);
}
@Test
- public void testH5Rdereference() {
- byte[] ref1 = null;
- byte[] ref2 = null;
- long dataset_id = -1;
- long group_id = -1;
+ public void testH5Rcreate_regionref_object() {
+ byte[] ref = null;
+ String objName = "/dset";
+ long start[] = {2,2}; // Starting location of hyperslab
+ long stride[] = {1,1}; // Stride of hyperslab
+ long count[] = {1,1}; // Element count of hyperslab
+ long block[] = {3,3}; // Block size of hyperslab
+
+ // Select 3x3 hyperslab for reference
try {
- //Create reference on dataset
- ref1 = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid);
- dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
-
- //Create reference on group
- ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
- group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
- assertNotNull(ref1);
- assertNotNull(ref2);
- assertTrue(dataset_id>=0);
- assertTrue(group_id>=0);
+ H5.H5Sselect_hyperslab(H5dsid, HDF5Constants.H5S_SELECT_SET, start, stride, count, block);
}
catch (Throwable err) {
err.printStackTrace();
- fail("TestH5Rdereference " + err);
- }
- finally {
- try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
- try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+ fail("testH5Rget_object: H5Sselect_hyperslab " + err);
}
- }
-
- @Test
- public void testH5Rget_region() {
- byte[] ref = null;
- long dsid = -1;
try {
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid);
- dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
- assertNotNull(ref);
- assertTrue(dsid>=0);
+ ref = H5.H5Rcreate_region(H5fid, objName, H5dsid, HDF5Constants.H5P_DEFAULT);
}
catch (Throwable err) {
err.printStackTrace();
- fail("TestH5Rget_region: " + err);
- }
- finally {
- try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+ fail("testH5Rget_object: H5Rcreate_region " + err);
}
+ assertNotNull(ref);
+ H5.H5Rdestroy(ref);
}
- @Test(expected = IllegalArgumentException.class)
- public void testH5Rget_name_Invalidreftype() throws Throwable {
- byte[] ref = null;
- String[] name= {""};
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1);
- H5.H5Rget_name(H5fid, HDF5Constants.H5R_DATASET_REGION, ref, name, 16);
+// These tests need to be updated with new APIs
+// @Test//
+// public void testH5Rget_group() {
+// long loc_id = H5fid;
+// int ref_type = HDF5Constants.H5R_OBJECT2;
+// long ret_val = -1;
+// byte[] ref = null;
+// String name = "";
+// String objName = "/dset";
+//
+// try {
+// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("testH5Rget_object: H5Rcreate_object " + err);
+// }
+// try {
+// dataset_id= H5.H5Rdereference(H5fid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_DATASET_REGION, ref1);
+//
+// //Create reference on group
+// ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
+// group_id= H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref2);
+// assertNotNull(ref1);
+// assertNotNull(ref2);
+// assertTrue(dataset_id >= 0);
+// assertTrue(group_id >= 0);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("TestH5Rdereference " + err);
+// }
+// finally {
+// try {H5.H5Dclose(dataset_id);} catch (Exception ex) {}
+// try {H5.H5Gclose(group_id);} catch (Exception ex) {}
+// }
+// }
+
+// @Test//
+// public void testH5Rget_region_dataset() {
+// long loc_id = H5fid;
+// int ref_type = HDF5Constants.H5R_OBJECT2;
+// long ret_val = -1;
+// byte[] ref = null;
+// String name = "";
+// String objName = "/dset";
+//
+// try {
+// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("testH5Rget_object: H5Rcreate_object " + err);
+// }
+// try {
+// dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+// assertNotNull(ref);
+// assertTrue(dsid >= 0);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("TestH5Rget_region: " + err);
+// }
+// finally {
+// try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+// }
+// }
+
+// @Test//
+// public void testH5Rget_attr() {
+// long loc_id = H5fid;
+// int ref_type = HDF5Constants.H5R_OBJECT2;
+// long ret_val = -1;
+// byte[] ref = null;
+// String name = "";
+// String objName = "/dset";
+//
+// try {
+// ref = H5.H5Rcreate_object(H5fid, objName, HDF5Constants.H5P_DEFAULT);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("testH5Rget_object: H5Rcreate_object " + err);
+// }
+// try {
+// dsid = H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+// assertNotNull(ref);
+// assertTrue(dsid >= 0);
+// }
+// catch (Throwable err) {
+// err.printStackTrace();
+// fail("TestH5Rget_region: " + err);
+// }
+// finally {
+// try {H5.H5Sclose(dsid);} catch (Exception ex) {}
+// }
+// }
+
+ // Test parameters to H5Rcreate_object
+ @Test(expected = NullPointerException.class)
+ public void testH5Rcreate_object_Nullname() throws Throwable {
+ String name = null;
+ H5.H5Rcreate_object(H5fid, name, HDF5Constants.H5P_DEFAULT);
+ }
+
+ @Test(expected = HDF5FunctionArgumentException.class)
+ public void testH5Rget_name_Invalidloc() throws Throwable {
+ String name= "";
+ H5.H5Rcreate_object(-1, name, HDF5Constants.H5P_DEFAULT);
}
+ // Test parameters to H5Rcreate_region
@Test(expected = NullPointerException.class)
- public void testH5Rget_name_NULLreference() throws Throwable {
+ public void testH5Rcreate_region_Nullname() throws Throwable {
+ String name = null;
+ H5.H5Rcreate_region(H5fid, name, -1, HDF5Constants.H5P_DEFAULT);
+ }
+
+ @Test(expected = HDF5FunctionArgumentException.class)
+ public void testH5Rcreate_region_Invalidloc() throws Throwable {
+ String name= "";
+ H5.H5Rcreate_region(-1, name, -1, HDF5Constants.H5P_DEFAULT);
+ }
+
+ // Test parameters to H5Rcreate_attr
+ @Test(expected = NullPointerException.class)
+ public void testH5Rcreate_attr_Nullname() throws Throwable {
+ String name = null;
+ String attrname = "";
+ H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
+ }
+
+ @Test(expected = NullPointerException.class)
+ public void testH5Rcreate_attr_Nullattrname() throws Throwable {
+ String name = "";
+ String attrname = null;
+ H5.H5Rcreate_attr(H5fid, name, attrname, HDF5Constants.H5P_DEFAULT);
+ }
+
+ @Test(expected = HDF5FunctionArgumentException.class)
+ public void testH5Rcreate_attr_Invalidloc() throws Throwable {
+ String name= "";
+ String attrname= "";
+ H5.H5Rcreate_attr(-1, name, attrname, HDF5Constants.H5P_DEFAULT);
+ }
+
+ // Test parameters to H5Rdestroy
+ @Test(expected = NullPointerException.class)
+ public void testH5Rdestroy_Nullref() throws Throwable {
byte[] ref = null;
- String[] name= {""};
- H5.H5Rget_name(H5fid, HDF5Constants.H5R_OBJECT, ref, name, 16);
+ H5.H5Rdestroy(ref);
}
- @Test(expected = HDF5LibraryException.class)
- public void testH5Rget_obj_type2_Invalidreftype() throws Throwable {
+ // Test parameters to H5Rget_type
+ @Test(expected = NullPointerException.class)
+ public void testH5Rget_type_Nullref() throws Throwable {
byte[] ref = null;
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, -1);
- H5.H5Rget_obj_type(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+ H5.H5Rget_type(ref);
+ }
+
+ // Test parameters to H5Requal
+ @Test(expected = NullPointerException.class)
+ public void testH5Requal_Nullref1() throws Throwable {
+ byte[] ref1 = null;
+ byte[] ref2 = {0,0,0,0};
+ H5.H5Requal(ref1, ref2);
}
- @Test(expected = HDF5LibraryException.class)
- public void testH5Rcreate_InvalidObjectName() throws Throwable {
- H5.H5Rcreate(H5fid, "/GROUPS", HDF5Constants.H5R_OBJECT, -1);
+ @Test(expected = NullPointerException.class)
+ public void testH5Requal_Nullref2() throws Throwable {
+ byte[] ref1 = {0,0,0,0};
+ byte[] ref2 = null;
+ H5.H5Requal(ref1, ref2);
}
- @Test(expected = HDF5LibraryException.class)
- public void testH5Rcreate_Invalidspace_id() throws Throwable {
- H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, -1);
+ // Test parameters to H5Rcopy
+ @Test(expected = NullPointerException.class)
+ public void testH5Rcopy_Nullref1() throws Throwable {
+ byte[] ref1 = null;
+ byte[] ref2 = H5.H5Rcopy(ref1);
}
- @Test(expected = IllegalArgumentException.class)
- public void testH5Rcreate_Invalidreftype() throws Throwable {
- H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_BADTYPE, -1);
+ // Test parameters to H5Ropen_object
+ @Test(expected = NullPointerException.class)
+ public void testH5Ropen_object_Nullref() throws Throwable {
+ byte[] ref = null;
+ H5.H5Ropen_object(ref, -1, -1);
}
- @Test(expected = IllegalArgumentException.class)
- public void testH5Rgetregion_Invalidreftype() throws Throwable {
+ // Test parameters to H5Ropen_region
+ @Test(expected = NullPointerException.class)
+ public void testH5Ropen_region_Nullref() throws Throwable {
byte[] ref = null;
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, H5dsid);
- H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+ H5.H5Ropen_region(ref, -1, -1);
}
- @Test(expected = IllegalArgumentException.class)
- public void testH5Rgetregion_Badreferencetype() throws Throwable {
+ // Test parameters to H5Ropen_attr
+ @Test(expected = NullPointerException.class)
+ public void testH5Ropen_attr_Nullref() throws Throwable {
byte[] ref = null;
- ref = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_OBJECT, H5dsid);
- H5.H5Rget_region(H5fid, HDF5Constants.H5R_OBJECT, ref);
+ H5.H5Ropen_attr(ref, -1, -1);
}
+ // Test parameters to H5Rget_obj_type3
@Test(expected = NullPointerException.class)
- public void testH5Rgetregion_Nullreference() throws Throwable {
+ public void testH5Rget_obj_type3_Nullref() throws Throwable {
byte[] ref = null;
- H5.H5Rget_region(H5fid, HDF5Constants.H5R_DATASET_REGION, ref);
+ H5.H5Rget_obj_type3(ref, -1);
}
+ // Test parameters to H5Rget_file_name
@Test(expected = NullPointerException.class)
- public void testH5Rdereference_Nullreference() throws Throwable {
+ public void testH5Rget_file_name_Nullref() throws Throwable {
byte[] ref = null;
- H5.H5Rdereference(H5did2, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref);
+ H5.H5Rget_file_name(ref);
}
- @Test(expected = IllegalArgumentException.class)
- public void testH5Rdereference_Invalidreference() throws Throwable {
- byte[] ref1 = null;
- byte[] ref2 = null;
- ref1 = H5.H5Rcreate(H5fid, "/dset", HDF5Constants.H5R_DATASET_REGION, H5dsid);
- ref2 = H5.H5Rcreate(H5gid, "/Group1", HDF5Constants.H5R_OBJECT, -1);
- H5.H5Rdereference(H5gid, HDF5Constants.H5P_DEFAULT, HDF5Constants.H5R_OBJECT, ref1);
+ // Test parameters to H5Rget_obj_name
+ @Test(expected = NullPointerException.class)
+ public void testH5Rget_obj_name_Nullref() throws Throwable {
+ byte[] ref = null;
+ H5.H5Rget_obj_name(ref, -1);
+ }
+
+ // Test parameters to H5Rget_attr_name
+ @Test(expected = NullPointerException.class)
+ public void testH5Rget_attr_name_Nullref() throws Throwable {
+ byte[] ref = null;
+ H5.H5Rget_attr_name(ref);
}
}
diff --git a/java/test/testfiles/JUnit-TestH5.txt b/java/test/testfiles/JUnit-TestH5.txt
index b282a91..4bab633 100644
--- a/java/test/testfiles/JUnit-TestH5.txt
+++ b/java/test/testfiles/JUnit-TestH5.txt
@@ -1,6 +1,7 @@
JUnit version 4.11
.testH5get_libversion_null_param
.testJ2C
+.testH5export_dataset
.testIsSerializable
.testH5garbage_collect
.testH5error_off
@@ -12,5 +13,5 @@ JUnit version 4.11
Time: XXXX
-OK (10 tests)
+OK (11 tests)
diff --git a/java/test/testfiles/JUnit-TestH5R.txt b/java/test/testfiles/JUnit-TestH5R.txt
index 150df54..a96fbb4 100644
--- a/java/test/testfiles/JUnit-TestH5R.txt
+++ b/java/test/testfiles/JUnit-TestH5R.txt
@@ -1,23 +1,28 @@
JUnit version 4.11
-.testH5Rgetregion_Nullreference
-.testH5Rget_obj_type2_Invalidreftype
-.testH5Rdereference
-.testH5Rget_name
-.testH5Rcreate_Invalidreftype
-.testH5Rget_name_NULLreference
-.testH5Rget_region
-.testH5Rdereference_Nullreference
-.testH5Rcreate_refobj
-.testH5Rcreate_Invalidspace_id
-.testH5Rdereference_Invalidreference
-.testH5Rgetregion_Badreferencetype
-.testH5Rcreate_regionrefobj
-.testH5Rget_name_Invalidreftype
-.testH5Rgetregion_Invalidreftype
-.testH5Rget_obj_type2
-.testH5Rcreate_InvalidObjectName
+.testH5Ropen_attr_Nullref
+.testH5Rget_attr_name_Nullref
+.testH5Ropen_region_Nullref
+.testH5Requal_Nullref1
+.testH5Requal_Nullref2
+.testH5Rget_object
+.testH5Rget_obj_type3_Nullref
+.testH5Ropen_object_Nullref
+.testH5Rdestroy_Nullref
+.testH5Rcreate_object_Nullname
+.testH5Rget_obj_type3
+.testH5Rget_name_Invalidloc
+.testH5Rcopy_Nullref1
+.testH5Rcreate_attr_Invalidloc
+.testH5Rget_file_name_Nullref
+.testH5Rget_obj_name_Nullref
+.testH5Rcreate_region_Nullname
+.testH5Rcreate_regionref_object
+.testH5Rcreate_attr_Nullattrname
+.testH5Rcreate_region_Invalidloc
+.testH5Rget_type_Nullref
+.testH5Rcreate_attr_Nullname
Time: XXXX
-OK (17 tests)
+OK (22 tests)
generated by cgit v0.12 at 2024-11-08 15:12:46 (GMT)