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-rw-r--r--java/src/Makefile.am2
-rw-r--r--java/src/hdf/hdf5lib/CMakeLists.txt2
-rw-r--r--java/src/hdf/hdf5lib/H5.java10
-rw-r--r--java/src/hdf/hdf5lib/HDF5Constants.java6
-rw-r--r--java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java102
-rw-r--r--java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java123
-rw-r--r--java/src/jni/h5Constants.c4
-rw-r--r--java/src/jni/h5fImp.c4
-rw-r--r--java/src/jni/h5pFAPLImp.c334
-rw-r--r--java/src/jni/h5pFAPLImp.h36
-rw-r--r--java/test/CMakeLists.txt14
-rw-r--r--java/test/Makefile.am2
-rw-r--r--java/test/TestAll.java1
-rw-r--r--java/test/TestH5Pfaplhdfs.java138
-rw-r--r--java/test/TestH5Pfapls3.java159
-rw-r--r--java/test/junit.sh.in48
-rw-r--r--java/test/testfiles/JUnit-TestH5Pfaplhdfs.txt9
-rw-r--r--java/test/testfiles/JUnit-TestH5Pfapls3.txt10
18 files changed, 1004 insertions, 0 deletions
diff --git a/java/src/Makefile.am b/java/src/Makefile.am
index bd55c39..fcdeae9 100644
--- a/java/src/Makefile.am
+++ b/java/src/Makefile.am
@@ -98,6 +98,8 @@ hdf5_java_JAVA = \
${pkgpath}/structs/H5A_info_t.java \
${pkgpath}/structs/H5E_error2_t.java \
${pkgpath}/structs/H5F_info2_t.java \
+ ${pkgpath}/structs/H5FD_hdfs_fapl_t.java \
+ ${pkgpath}/structs/H5FD_ros3_fapl_t.java \
${pkgpath}/structs/H5G_info_t.java \
${pkgpath}/structs/H5L_info_t.java \
${pkgpath}/structs/H5O_info_t.java \
diff --git a/java/src/hdf/hdf5lib/CMakeLists.txt b/java/src/hdf/hdf5lib/CMakeLists.txt
index c171ea8..be8f60a 100644
--- a/java/src/hdf/hdf5lib/CMakeLists.txt
+++ b/java/src/hdf/hdf5lib/CMakeLists.txt
@@ -73,6 +73,8 @@ set (HDF5_JAVA_HDF_HDF5_STRUCTS_SOURCES
structs/H5AC_cache_config_t.java
structs/H5E_error2_t.java
structs/H5F_info2_t.java
+ structs/H5FD_ros3_fapl_t.java
+ structs/H5FD_hdfs_fapl_t.java
structs/H5G_info_t.java
structs/H5L_info_t.java
structs/H5O_hdr_info_t.java
diff --git a/java/src/hdf/hdf5lib/H5.java b/java/src/hdf/hdf5lib/H5.java
index 6e37d77..2a76b89 100644
--- a/java/src/hdf/hdf5lib/H5.java
+++ b/java/src/hdf/hdf5lib/H5.java
@@ -50,6 +50,8 @@ import hdf.hdf5lib.structs.H5AC_cache_config_t;
import hdf.hdf5lib.structs.H5A_info_t;
import hdf.hdf5lib.structs.H5E_error2_t;
import hdf.hdf5lib.structs.H5F_info2_t;
+import hdf.hdf5lib.structs.H5FD_hdfs_fapl_t;
+import hdf.hdf5lib.structs.H5FD_ros3_fapl_t;
import hdf.hdf5lib.structs.H5G_info_t;
import hdf.hdf5lib.structs.H5L_info_t;
import hdf.hdf5lib.structs.H5O_info_t;
@@ -7759,6 +7761,10 @@ public class H5 implements java.io.Serializable {
public synchronized static native int H5Pset_fapl_family(long fapl_id, long memb_size, long memb_fapl_id)
throws HDF5LibraryException, NullPointerException;
+ public synchronized static native int H5Pset_fapl_hdfs(long fapl_id, H5FD_hdfs_fapl_t fapl_conf) throws HDF5LibraryException, NullPointerException;
+
+ public synchronized static native H5FD_hdfs_fapl_t H5Pget_fapl_hdfs(long fapl_id) throws HDF5LibraryException, NullPointerException;
+
/**
* H5Pget_fapl_multi Sets up use of the multi I/O driver.
*
@@ -7843,6 +7849,10 @@ public class H5 implements java.io.Serializable {
public synchronized static native int H5Pset_fapl_windows(long fapl_id) throws HDF5LibraryException, NullPointerException;
+ public synchronized static native int H5Pset_fapl_ros3(long fapl_id, H5FD_ros3_fapl_t fapl_conf) throws HDF5LibraryException, NullPointerException;
+
+ public synchronized static native H5FD_ros3_fapl_t H5Pget_fapl_ros3(long fapl_id) throws HDF5LibraryException, NullPointerException;
+
// /////// unimplemented ////////
// Generic property list routines //
diff --git a/java/src/hdf/hdf5lib/HDF5Constants.java b/java/src/hdf/hdf5lib/HDF5Constants.java
index 7eddac0..3f8e5d1 100644
--- a/java/src/hdf/hdf5lib/HDF5Constants.java
+++ b/java/src/hdf/hdf5lib/HDF5Constants.java
@@ -238,6 +238,8 @@ public class HDF5Constants {
public static final long H5FD_SEC2 = H5FD_SEC2();
public static final long H5FD_STDIO = H5FD_STDIO();
public static final long H5FD_WINDOWS = H5FD_WINDOWS();
+ public static final long H5FD_ROS3 = H5FD_ROS3();
+ public static final long H5FD_HDFS = H5FD_HDFS();
public static final int H5FD_LOG_LOC_READ = H5FD_LOG_LOC_READ();
public static final int H5FD_LOG_LOC_WRITE = H5FD_LOG_LOC_WRITE();
public static final int H5FD_LOG_LOC_SEEK = H5FD_LOG_LOC_SEEK();
@@ -1072,6 +1074,10 @@ public class HDF5Constants {
private static native final long H5FD_WINDOWS();
+ private static native final long H5FD_ROS3();
+
+ private static native final long H5FD_HDFS();
+
private static native final int H5FD_LOG_LOC_READ();
private static native final int H5FD_LOG_LOC_WRITE();
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
new file mode 100644
index 0000000..9fcff2e
--- /dev/null
+++ b/java/src/hdf/hdf5lib/structs/H5FD_hdfs_fapl_t.java
@@ -0,0 +1,102 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Read-Only HDFS Virtual File Driver (VFD) *
+ * Copyright (c) 2018, The HDF Group. *
+ * *
+ * All rights reserved. *
+ * *
+ * NOTICE: *
+ * All information contained herein is, and remains, the property of The HDF *
+ * Group. The intellectual and technical concepts contained herein are *
+ * proprietary to The HDF Group. Dissemination of this information or *
+ * reproduction of this material is strictly forbidden unless prior written *
+ * permission is obtained from The HDF Group. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+package hdf.hdf5lib.structs;
+
+import java.io.Serializable;
+
+/*
+ * Java representation of the HDFS VFD file access property list (fapl)
+ * structure.
+ *
+ * Used for the access of files hosted on the Hadoop Distributed File System.
+ */
+
+public class H5FD_hdfs_fapl_t implements Serializable {
+ private static final long serialVersionUID = 2072473407027648309L;
+
+ private int version;
+ private String namenode_name;
+ private int namenode_port;
+ private String user_name;
+ private String kerberos_ticket_cache;
+ private int stream_buffer_size;
+
+ /*
+ * Create a fapl_t structure with the specified components.
+ */
+ public H5FD_hdfs_fapl_t(
+ String namenode_name,
+ int namenode_port,
+ String user_name,
+ String kerberos_ticket_cache,
+ int stream_buffer_size)
+ {
+ this.version = 1;
+ this.namenode_name = namenode_name;
+ this.namenode_port = namenode_port;
+ this.user_name = user_name;
+ this.kerberos_ticket_cache = kerberos_ticket_cache;
+ this.stream_buffer_size = stream_buffer_size;
+ }
+
+ @Override
+ public boolean equals(Object o) {
+ if (o == null)
+ return false;
+ if (!(o instanceof H5FD_hdfs_fapl_t))
+ return false;
+
+ H5FD_hdfs_fapl_t other = (H5FD_hdfs_fapl_t)o;
+ if (this.version != other.version)
+ return false;
+ if (!this.namenode_name.equals(other.namenode_name))
+ return false;
+ if (this.namenode_port != other.namenode_port)
+ return false;
+ if (!this.user_name.equals(other.user_name))
+ return false;
+ if (!this.kerberos_ticket_cache.equals(other.kerberos_ticket_cache))
+ return false;
+ if (this.stream_buffer_size != other.stream_buffer_size)
+ return false;
+ return true;
+ }
+
+ @Override
+ public int hashCode() {
+ /* this is a _very bad_ hash algorithm for purposes of hashing! */
+ /* implemented to satisfy the "contract" regarding equality */
+ int k = (int)this.version;
+ k += this.namenode_name.length();
+ k += this.user_name.length();
+ k += this.kerberos_ticket_cache.length();
+ k += namenode_port;
+ k += stream_buffer_size;
+ return k;
+ }
+
+ @Override
+ public String toString() {
+ return "H5FD_hdfs_fapl_t (Version: " + this.version + ") {" +
+ "\n namenode_name: '" + this.namenode_name +
+ "'\n namenode_port: " + this.namenode_port +
+ "\n user_name: '" + this.user_name +
+ "'\n kerberos_ticket_cache: '" + this.kerberos_ticket_cache +
+ "'\n stream_buffer_size: " + this.stream_buffer_size +
+ "\n}\n";
+ }
+}
+
+
diff --git a/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
new file mode 100644
index 0000000..a899e10
--- /dev/null
+++ b/java/src/hdf/hdf5lib/structs/H5FD_ros3_fapl_t.java
@@ -0,0 +1,123 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Read-Only S3 Virtual File Driver (VFD) *
+ * Copyright (c) 2017-2018, The HDF Group. *
+ * *
+ * All rights reserved. *
+ * *
+ * NOTICE: *
+ * All information contained herein is, and remains, the property of The HDF *
+ * Group. The intellectual and technical concepts contained herein are *
+ * proprietary to The HDF Group. Dissemination of this information or *
+ * reproduction of this material is strictly forbidden unless prior written *
+ * permission is obtained from The HDF Group. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+package hdf.hdf5lib.structs;
+
+import java.io.Serializable;
+
+/*
+ * Java representation of the ROS3 VFD file access property list (fapl)
+ * structure.
+ *
+ * Used for the access of files hosted remotely on S3 by Amazon.
+ *
+ * For simplicity, implemented assuming that all ROS3 fapls have components:
+ * - version
+ * - authenticate
+ * - aws_region
+ * - secret_id
+ * - secret_key
+ *
+ * Future implementations may be created to enable different fapl "shapes"
+ * depending on provided version.
+ *
+ * proposed:
+ *
+ * H5FD_ros3_fapl_t (super class, has only version field)
+ * H5FD_ros3_fapl_v1_t (extends super with Version 1 components)
+ * H5FD_ros3_fapl_v2_t (extends super with Version 2 components)
+ * and so on, for each version
+ *
+ * "super" is passed around, and is version-checked and re-cast as
+ * appropriate
+ */
+
+public class H5FD_ros3_fapl_t implements Serializable {
+ private static final long serialVersionUID = 8985533001471224030L;
+
+ private int version;
+ private boolean authenticate;
+ private String aws_region;
+ private String secret_id;
+ private String secret_key;
+
+ /**
+ * Create a "default" fapl_t structure, for anonymous access.
+ */
+ public H5FD_ros3_fapl_t () {
+ /* H5FD_ros3_fapl_t("", "", ""); */ /* defer */
+ this.version = 1;
+ this.aws_region = "";
+ this.secret_id = "";
+ this.secret_key = "";
+ }
+
+ /**
+ * Create a fapl_t structure with the specified components.
+ * If all are the empty string, is anonymous (non-authenticating).
+ * Region and ID must both be supplied for authentication.
+ *
+ * @param region "aws region" for authenticating request
+ * @param id "secret id" or "access id" for authenticating request
+ * @param key "secret key" or "access key" for authenticating request
+ */
+ public H5FD_ros3_fapl_t (String region, String id, String key) {
+ this.version = 1; /* must equal H5FD_CURR_ROS3_FAPL_T_VERSION */
+ /* as found in H5FDros3.h */
+ this.aws_region = region;
+ this.secret_id = id;
+ this.secret_key = key;
+ }
+
+ @Override
+ public boolean equals(Object o) {
+ if (o == null)
+ return false;
+ if (!(o instanceof H5FD_ros3_fapl_t))
+ return false;
+
+ H5FD_ros3_fapl_t other = (H5FD_ros3_fapl_t)o;
+ if (this.version != other.version)
+ return false;
+ if (!this.aws_region.equals(other.aws_region))
+ return false;
+ if (!this.secret_key.equals(other.secret_key))
+ return false;
+ if (!this.secret_id.equals(other.secret_id))
+ return false;
+ return true;
+ }
+
+ @Override
+ public int hashCode() {
+ /* this is a _very bad_ hash algorithm for purposes of hashing! */
+ /* implemented to satisfy the "contract" regarding equality */
+ int k = (int)this.version;
+ k += this.aws_region.length();
+ k += this.secret_id.length();
+ k += this.secret_key.length();
+ return k;
+ }
+
+ @Override
+ public String toString() {
+ return "H5FD_ros3_fapl_t (Version:" + this.version + ") {" +
+ "\n aws_region : " + this.aws_region +
+ "\n secret_id : " + this.secret_id +
+ "\n secret_key : " + this.secret_key +
+ "\n}\n";
+ }
+}
+
+
diff --git a/java/src/jni/h5Constants.c b/java/src/jni/h5Constants.c
index 1ea549e..f1bd951 100644
--- a/java/src/jni/h5Constants.c
+++ b/java/src/jni/h5Constants.c
@@ -438,6 +438,8 @@ Java_hdf_hdf5lib_HDF5Constants_H5FD_1DIRECT(JNIEnv *env, jclass cls) {
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1FAMILY(JNIEnv *env, jclass cls) { return H5FD_FAMILY; }
JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_HDF5Constants_H5FD_1HDFS(JNIEnv *env, jclass cls) { return H5FD_HDFS; }
+JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1LOG(JNIEnv *env, jclass cls) { return H5FD_LOG; }
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1MPIO(JNIEnv *env, jclass cls) { return H5FD_MPIO; }
@@ -446,6 +448,8 @@ Java_hdf_hdf5lib_HDF5Constants_H5FD_1MULTI(JNIEnv *env, jclass cls) { return H5F
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1SEC2(JNIEnv *env, jclass cls) { return H5FD_SEC2; }
JNIEXPORT jlong JNICALL
+Java_hdf_hdf5lib_HDF5Constants_H5FD_1ROS3(JNIEnv *env, jclass cls) { return H5FD_ROS3; }
+JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1STDIO(JNIEnv *env, jclass cls) { return H5FD_STDIO; }
JNIEXPORT jlong JNICALL
Java_hdf_hdf5lib_HDF5Constants_H5FD_1WINDOWS(JNIEnv *env, jclass cls) {
diff --git a/java/src/jni/h5fImp.c b/java/src/jni/h5fImp.c
index 115e8f4..2924d8f 100644
--- a/java/src/jni/h5fImp.c
+++ b/java/src/jni/h5fImp.c
@@ -161,6 +161,10 @@ Java_hdf_hdf5lib_H5_H5Fis_1hdf5
UNUSED(clss);
+#ifdef H5_NO_DEPRECATED_SYMBOLS
+ H5_UNIMPLEMENTED(ENVONLY, "H5Fis_hdf5: not implemented");
+#endif
+
if (NULL == name)
H5_NULL_ARGUMENT_ERROR(ENVONLY, "H5Fis_hdf5: file name is NULL");
diff --git a/java/src/jni/h5pFAPLImp.c b/java/src/jni/h5pFAPLImp.c
index acfc853..006707a 100644
--- a/java/src/jni/h5pFAPLImp.c
+++ b/java/src/jni/h5pFAPLImp.c
@@ -370,6 +370,179 @@ done:
return (jlong)offset;
} /* end Java_hdf_hdf5lib_H5_H5Pget_1family_1offset */
+/* Class: hdf_hdf5lib_H5
+ * Method: H5Pset_fapl_hdfs
+ * Signature: (J)Lhdf/hdf5lib/structs/H5FD_hdfs_fapl_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fapl_1hdfs
+ (JNIEnv *env, jclass clss, jlong fapl_id)
+{
+#ifdef H5_HAVE_LIBHDFS
+ H5FD_hdfs_fapl_t fa;
+ jvalue args[5];
+ jint j_namenode_port = 0;
+ jstring j_namenode_name = NULL;
+ jstring j_user_name = NULL;
+ jstring j_kerb_cache_path = NULL;
+ jint j_stream_buffer_size = 0;
+#endif /* H5_HAVE_LIBHDFS */
+ jobject ret_obj = NULL;
+
+ UNUSED(clss);
+
+#ifdef H5_HAVE_LIBHDFS
+ if (H5Pget_fapl_hdfs((hid_t)fapl_id, &fa) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+ if (NULL != fa.namenode_name) {
+ if (NULL == (j_namenode_name = ENVPTR->NewStringUTF(ENVONLY, fa.namenode_name))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_hdfs: out of memory - can't create namenode_name string");
+ }
+ }
+ args[0].l = j_namenode_name;
+
+ args[1].i = (jint)fa.namenode_port;
+
+ if (NULL != fa.user_name) {
+ if (NULL == (j_user_name = ENVPTR->NewStringUTF(ENVONLY, fa.user_name))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_hdfs: out of memory - can't create user_name string");
+ }
+ }
+ args[2].l = j_user_name;
+
+ if (NULL != fa.kerberos_ticket_cache) {
+ if (NULL == (j_kerb_cache_path = ENVPTR->NewStringUTF(ENVONLY, fa.kerberos_ticket_cache))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_hdfs: out of memory - can't create kerberos_ticket_cache string");
+ }
+ }
+ args[3].l = j_kerb_cache_path;
+
+ args[4].i = (jint)fa.stream_buffer_size;
+
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5FD_hdfs_fapl_t", "(Ljava/lang/String;ILjava/lang/String;Ljava/lang/String;I)V", args, ret_obj);
+#else
+ H5_UNIMPLEMENTED(ENVONLY, "H5Pget_fapl_hdfs: not implemented");
+#endif /* H5_HAVE_LIBHDFS */
+
+done:
+ return ret_obj;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1fapl_1hdfs */
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Pset_fapl_hdfs
+ * Signature: (JLhdf/hdf5lib/structs/H5FD_hdfs_fapl_t;)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fapl_1hdfs
+ (JNIEnv *env, jclass clss, jlong fapl_id, jobject fapl_config)
+{
+#ifdef H5_HAVE_LIBHDFS
+ H5FD_hdfs_fapl_t instance;
+ const char *str = NULL;
+ jfieldID fid;
+ jstring j_str;
+ jclass cls;
+#endif /* H5_HAVE_LIBHDFS */
+
+ UNUSED(clss);
+
+#ifdef H5_HAVE_LIBHDFS
+ HDmemset(&instance, 0, sizeof(H5FD_hdfs_fapl_t));
+
+ if (NULL == (cls = ENVPTR->GetObjectClass(ENVONLY, fapl_config)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "version", "I")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ instance.version = ENVPTR->GetIntField(ENVONLY, fapl_config, fid);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "namenode_name", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5FDset_fapl_hdfs: fapl_config namenode_name not pinned");
+
+ HDstrncpy(instance.namenode_name, str, H5FD__HDFS_NODE_NAME_SPACE + 1);
+ instance.namenode_name[H5FD__HDFS_NODE_NAME_SPACE] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.namenode_name, 0, H5FD__HDFS_NODE_NAME_SPACE + 1);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "namenode_port", "I")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ instance.namenode_port = ENVPTR->GetIntField(ENVONLY, fapl_config, fid);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "user_name", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5FDset_fapl_hdfs: fapl_config user_name not pinned");
+
+ HDstrncpy(instance.user_name, str, H5FD__HDFS_USER_NAME_SPACE + 1);
+ instance.user_name[H5FD__HDFS_USER_NAME_SPACE] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.user_name, 0, H5FD__HDFS_USER_NAME_SPACE + 1);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "kerberos_ticket_cache", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5FDset_fapl_hdfs: fapl_config kerberos_ticket_cache not pinned");
+
+ HDstrncpy(instance.kerberos_ticket_cache, str, H5FD__HDFS_KERB_CACHE_PATH_SPACE + 1);
+ instance.kerberos_ticket_cache[H5FD__HDFS_KERB_CACHE_PATH_SPACE] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.kerberos_ticket_cache, 0, H5FD__HDFS_KERB_CACHE_PATH_SPACE + 1);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "stream_buffer_size", "I")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ instance.stream_buffer_size = ENVPTR->GetIntField(ENVONLY, fapl_config, fid);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (H5Pset_fapl_hdfs((hid_t)fapl_id, &instance) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+#else
+ H5_UNIMPLEMENTED(ENVONLY, "H5Pset_fapl_hdfs: not implemented");
+#endif /* H5_HAVE_LIBHDFS */
+
+done:
+ /* NOP */;
+#ifdef H5_HAVE_LIBHDFS
+ if (str)
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+#endif /* H5_HAVE_LIBHDFS */
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1fapl_1hdfs */
+
/*
* Class: hdf_hdf5lib_H5
* Method: H5Pset_fapl_log
@@ -617,6 +790,167 @@ done:
*/
/*
+ * Class: hdf5_hdf5lib_H5
+ * Method: H5Pget_fapl_ros3
+ * Signature: (J)Lhdf/hdf5lib/structs/H5FD_ros3_fapl_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fapl_1ros3
+ (JNIEnv *env, jclass clss, jlong fapl_id)
+{
+#ifdef H5_HAVE_ROS3_VFD
+ H5FD_ros3_fapl_t fa;
+ jvalue args[3];
+ jstring j_aws = NULL;
+ jstring j_id = NULL;
+ jstring j_key = NULL;
+#endif /* H5_HAVE_ROS3_VFD */
+ jobject ret_obj = NULL;
+
+ UNUSED(clss);
+
+#ifdef H5_HAVE_ROS3_VFD
+ /* pass fapl and fapl_t instance into library get_fapl */
+ /* store fapl details in ros3_fapl_t instance `fa` */
+ if (H5Pget_fapl_ros3((hid_t)fapl_id, &fa) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+
+ if (NULL != fa.aws_region) {
+ if (NULL == (j_aws = ENVPTR->NewStringUTF(ENVONLY, fa.aws_region))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_ros3: out of memory - can't create aws_region string");
+ }
+ }
+ args[0].l = j_aws;
+
+ if (NULL != fa.secret_id) {
+ if (NULL == (j_id = ENVPTR->NewStringUTF(ENVONLY, fa.secret_id))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_ros3: out of memory - can't create secret_id string");
+ }
+ }
+ args[1].l = j_id;
+
+ if (NULL != fa.secret_key) {
+ if (NULL == (j_key = ENVPTR->NewStringUTF(ENVONLY, fa.secret_key))) {
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_TRUE);
+ H5_JNI_FATAL_ERROR(ENVONLY, "H5Pget_fapl_ros3: out of memory - can't create secret_key string");
+ }
+ }
+ args[2].l = j_key;
+
+ CALL_CONSTRUCTOR(ENVONLY, "hdf/hdf5lib/structs/H5FD_ros3_fapl_t", "(Ljava/lang/String;Ljava/lang/String;Ljava/lang/String;)V", args, ret_obj);
+#else
+ H5_UNIMPLEMENTED(ENVONLY, "H5Pget_fapl_ros3: not implemented");
+#endif /* H5_HAVE_ROS3_VFD */
+
+done:
+ return ret_obj;
+} /* end Java_hdf_hdf5lib_H5_H5Pget_1fapl_1ros3 */
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Pset_fapl_ros3
+ * Signature: (JLhdf/hdf5lib/structs/H5FD_ros3_fapl_t;)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fapl_1ros3
+ (JNIEnv *env, jclass clss, jlong fapl_id, jobject fapl_config)
+{
+#ifdef H5_HAVE_ROS3_VFD
+ H5FD_ros3_fapl_t instance;
+ const char *str = NULL;
+ jfieldID fid;
+ jstring j_str;
+ jclass cls;
+#endif /* H5_HAVE_ROS3_VFD */
+
+ UNUSED(clss);
+
+#ifdef H5_HAVE_ROS3_VFD
+ HDmemset(&instance, 0, sizeof(H5FD_ros3_fapl_t));
+
+ if (NULL == (cls = ENVPTR->GetObjectClass(ENVONLY, fapl_config)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "version", "I")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ instance.version = ENVPTR->GetIntField(ENVONLY, fapl_config, fid);
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "aws_region", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5Pset_fapl_ros3: fapl_config aws_region not pinned");
+
+ HDstrncpy(instance.aws_region, str, H5FD_ROS3_MAX_REGION_LEN + 1);
+ instance.aws_region[H5FD_ROS3_MAX_REGION_LEN] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.aws_region, 0, H5FD_ROS3_MAX_REGION_LEN + 1);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "secret_id", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5Pset_fapl_ros3: fapl_config secret_id not pinned");
+
+ HDstrncpy(instance.secret_id, str, H5FD_ROS3_MAX_SECRET_ID_LEN + 1);
+ instance.secret_id[H5FD_ROS3_MAX_SECRET_ID_LEN] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.secret_id, 0, H5FD_ROS3_MAX_SECRET_ID_LEN + 1);
+
+ if (NULL == (fid = ENVPTR->GetFieldID(ENVONLY, cls, "secret_key", "Ljava/lang/String;")))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (NULL == (j_str = (jstring)ENVPTR->GetObjectField(ENVONLY, fapl_config, fid)))
+ CHECK_JNI_EXCEPTION(ENVONLY, JNI_FALSE);
+
+ if (j_str) {
+ PIN_JAVA_STRING(ENVONLY, j_str, str, NULL, "H5Pset_fapl_ros3: fapl_config secret_key not pinned");
+
+ HDstrncpy(instance.secret_key, str, H5FD_ROS3_MAX_SECRET_KEY_LEN + 1);
+ instance.secret_key[H5FD_ROS3_MAX_SECRET_KEY_LEN] = '\0';
+
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+ str = NULL;
+ }
+ else
+ HDmemset(instance.secret_key, 0, H5FD_ROS3_MAX_SECRET_KEY_LEN + 1);
+
+ if (instance.aws_region[0] != '\0' && instance.secret_id[0] !='\0' && instance.secret_key[0] !='\0')
+ instance.authenticate = TRUE;
+
+ if (H5Pset_fapl_ros3((hid_t)fapl_id, &instance) < 0)
+ H5_LIBRARY_ERROR(ENVONLY);
+#else
+ H5_UNIMPLEMENTED(ENVONLY, "H5Pset_fapl_ros3: not implemented");
+#endif /* H5_HAVE_ROS3_VFD */
+
+done:
+ /* NOP */;
+#ifdef H5_HAVE_ROS3_VFD
+ if (str)
+ UNPIN_JAVA_STRING(ENVONLY, j_str, str);
+#endif /* H5_HAVE_LIBHDFS */
+} /* end Java_hdf_hdf5lib_H5_H5Pset_1fapl_1ros3 */
+
+/*
* Class: hdf_hdf5lib_H5
* Method: H5Pset_fapl_split
* Signature: (JLjava/lang/String;JLjava/lang/String;J)V
diff --git a/java/src/jni/h5pFAPLImp.h b/java/src/jni/h5pFAPLImp.h
index 28b1d95..9b353e6 100644
--- a/java/src/jni/h5pFAPLImp.h
+++ b/java/src/jni/h5pFAPLImp.h
@@ -137,6 +137,24 @@ Java_hdf_hdf5lib_H5_H5Pget_1family_1offset
/*
* Class: hdf_hdf5lib_H5
+ * Method: H5Pget_fapl_hdfs
+ * Signature: (J)Lhdf/hdf5lib/structs/H5FD_hdfs_fapl_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fapl_1hdfs
+(JNIEnv *, jclass, jlong);
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Pset_fapl_hdfs
+ * Signature: (JLhdf/hdf5lib/structs/H5FD_hdfs_fapl_t;)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fapl_1hdfs
+(JNIEnv *, jclass, jlong, jobject);
+
+/*
+ * Class: hdf_hdf5lib_H5
* Method: H5Pset_fapl_log
* Signature: (JLjava/lang/String;JJ)V
*/
@@ -188,6 +206,24 @@ Java_hdf_hdf5lib_H5_H5Pget_1fapl_1multi
/*
* Class: hdf_hdf5lib_H5
+ * Method: H5Pget_fapl_ros3
+ * Signature: (J)Lhdf/hdf5lib/structs/H5FD_ros3_fapl_t;
+ */
+JNIEXPORT jobject JNICALL
+Java_hdf_hdf5lib_H5_H5Pget_1fapl_1ros3
+(JNIEnv *, jclass, jlong);
+
+/*
+ * Class: hdf_hdf5lib_H5
+ * Method: H5Pset_fapl_ros3
+ * Signature: (JLhdf/hdf5lib/structs/H5FD_ros3_fapl_t;)V
+ */
+JNIEXPORT void JNICALL
+Java_hdf_hdf5lib_H5_H5Pset_1fapl_1ros3
+(JNIEnv *, jclass, jlong, jobject);
+
+/*
+ * Class: hdf_hdf5lib_H5
* Method: H5Pset_fapl_split
* Signature: (JLjava/lang/String;JLjava/lang/String;J)V
*/
diff --git a/java/test/CMakeLists.txt b/java/test/CMakeLists.txt
index b119dd2..d44bc2f 100644
--- a/java/test/CMakeLists.txt
+++ b/java/test/CMakeLists.txt
@@ -50,6 +50,20 @@ if (NOT HDF5_ENABLE_DEBUG_APIS)
)
endif ()
+if (HDF5_ENABLE_ROS3_VFD)
+ set (HDF5_JAVA_TEST_SOURCES
+ ${HDF5_JAVA_TEST_SOURCES}
+ TestH5Pfapls3
+ )
+endif ()
+
+if (HDF5_ENABLE_HDFS)
+ set (HDF5_JAVA_TEST_SOURCES
+ ${HDF5_JAVA_TEST_SOURCES}
+ TestH5Pfaplhdfs
+ )
+endif ()
+
set (CMAKE_JAVA_INCLUDE_PATH "${HDF5_JAVA_LIB_DIR}/junit.jar;${HDF5_JAVA_LIB_DIR}/hamcrest-core.jar;${HDF5_JAVA_JARS};${HDF5_JAVA_LOGGING_JAR};${HDF5_JAVA_LOGGING_SIMPLE_JAR}")
foreach (test_file ${HDF5_JAVA_TEST_SOURCES})
diff --git a/java/test/Makefile.am b/java/test/Makefile.am
index 6635ef7..e6c9b16 100644
--- a/java/test/Makefile.am
+++ b/java/test/Makefile.am
@@ -61,6 +61,8 @@ noinst_JAVA = \
TestH5P.java \
TestH5PData.java \
TestH5Pfapl.java \
+ TestH5Pfaplhdfs.java \
+ TestH5Pfapls3.java \
TestH5Pvirtual.java \
TestH5Plist.java \
TestH5A.java \
diff --git a/java/test/TestAll.java b/java/test/TestAll.java
index 13cb597..c7c206c 100644
--- a/java/test/TestAll.java
+++ b/java/test/TestAll.java
@@ -27,6 +27,7 @@ import org.junit.runners.Suite;
TestH5Lparams.class, TestH5Lbasic.class, TestH5Lcreate.class,
TestH5R.class,
TestH5P.class, TestH5PData.class, TestH5Pfapl.class, TestH5Pvirtual.class, TestH5Plist.class,
+ TestH5Pfapls3.class, TestH5Pfaplhdfs.class,
TestH5A.class,
TestH5Oparams.class, TestH5Obasic.class, TestH5Ocopy.class, TestH5Ocreate.class,
TestH5PL.class, TestH5Z.class
diff --git a/java/test/TestH5Pfaplhdfs.java b/java/test/TestH5Pfaplhdfs.java
new file mode 100644
index 0000000..b0d42d8
--- /dev/null
+++ b/java/test/TestH5Pfaplhdfs.java
@@ -0,0 +1,138 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+package test;
+
+import static org.junit.Assert.assertEquals;
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertNull;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assert.fail;
+
+import hdf.hdf5lib.H5;
+import hdf.hdf5lib.HDF5Constants;
+import hdf.hdf5lib.exceptions.HDF5Exception;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
+import hdf.hdf5lib.structs.H5FD_hdfs_fapl_t;
+
+import org.junit.After;
+import org.junit.Before;
+import org.junit.Rule;
+import org.junit.Test;
+import org.junit.rules.TestName;
+
+public class TestH5Pfaplhdfs {
+ @Rule public TestName testname = new TestName();
+
+ long fapl_id = -1;
+ long plapl_id = -1;
+ long dapl_id = -1;
+ long plist_id = -1;
+ long btplist_id = -1;
+
+ @Before
+ public void createFileAccess() throws NullPointerException, HDF5Exception
+ {
+ assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
+ System.out.print(testname.getMethodName());
+
+ try {
+ fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(fapl_id > 0);
+ try {
+ plapl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(plapl_id > 0);
+ try {
+ plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+ btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+ dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(plist_id > 0);
+ assertTrue(btplist_id > 0);
+ assertTrue(dapl_id > 0);
+ }
+
+ @After
+ public void deleteFileAccess() throws HDF5LibraryException
+ {
+ if (fapl_id > 0)
+ try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
+ if (plapl_id > 0)
+ try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
+ if (dapl_id > 0)
+ try {H5.H5Pclose(dapl_id);} catch (Exception ex) {}
+ if (plist_id > 0)
+ try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+ if (btplist_id > 0)
+ try {H5.H5Pclose(btplist_id);} catch (Exception ex) {}
+ System.out.println();
+ }
+
+ @Test
+ public void testHDFS_fapl() throws Exception
+ {
+ if (HDF5Constants.H5FD_HDFS < 0)
+ throw new HDF5LibraryException("skip");
+
+ String nodename = "blues";
+ int nodeport = 12345;
+ String username = "sparticus";
+ String kerbcache = "/dev/null";
+ int streamsize = 1024;
+
+ final H5FD_hdfs_fapl_t config = new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize);
+ assertTrue("setting fapl should succeed", -1 < H5.H5Pset_fapl_hdfs(fapl_id, config));
+
+ assertEquals("driver types should match", HDF5Constants.H5FD_HDFS, H5.H5Pget_driver(fapl_id));
+
+ H5FD_hdfs_fapl_t copy = H5.H5Pget_fapl_hdfs(fapl_id);
+ assertEquals("fapl contents should match", new H5FD_hdfs_fapl_t(nodename, nodeport, username, kerbcache, streamsize), copy);
+ }
+
+ @Test(expected = HDF5LibraryException.class)
+ public void testH5Pget_fapl_hdfs_invalid_fapl_id() throws Exception
+ {
+ if (HDF5Constants.H5FD_HDFS < 0)
+ throw new HDF5LibraryException("skip");
+ H5FD_hdfs_fapl_t fails = H5.H5Pget_fapl_hdfs(-1);
+ }
+
+ @Test(expected = HDF5LibraryException.class)
+ public void testH5Pget_fapl_hdfs_fapl_id_of_wrong_driver_type() throws Exception
+ {
+ if (HDF5Constants.H5FD_HDFS < 0)
+ throw new HDF5LibraryException("skip");
+ if (HDF5Constants.H5FD_SEC2 < 0 )
+ throw new HDF5LibraryException("skip");
+ /* TODO: for now, test against a sec2 fapl only */
+
+ H5.H5Pset_fapl_sec2(fapl_id);
+ assertEquals("fapl_id was not set properly", HDF5Constants.H5FD_SEC2, H5.H5Pget_driver(fapl_id));
+ H5FD_hdfs_fapl_t fails = H5.H5Pget_fapl_hdfs(fapl_id);
+ }
+
+}
diff --git a/java/test/TestH5Pfapls3.java b/java/test/TestH5Pfapls3.java
new file mode 100644
index 0000000..ba10524
--- /dev/null
+++ b/java/test/TestH5Pfapls3.java
@@ -0,0 +1,159 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+package test;
+
+import static org.junit.Assert.assertEquals;
+import static org.junit.Assert.assertFalse;
+import static org.junit.Assert.assertNull;
+import static org.junit.Assert.assertTrue;
+import static org.junit.Assert.fail;
+
+import hdf.hdf5lib.H5;
+import hdf.hdf5lib.HDF5Constants;
+import hdf.hdf5lib.exceptions.HDF5Exception;
+import hdf.hdf5lib.exceptions.HDF5LibraryException;
+import hdf.hdf5lib.structs.H5FD_ros3_fapl_t;
+
+import org.junit.After;
+import org.junit.Before;
+import org.junit.Rule;
+import org.junit.Test;
+import org.junit.rules.TestName;
+
+public class TestH5Pfapls3 {
+ @Rule public TestName testname = new TestName();
+
+ long fapl_id = -1;
+ long plapl_id = -1;
+ long dapl_id = -1;
+ long plist_id = -1;
+ long btplist_id = -1;
+
+ @Before
+ public void createFileAccess() throws NullPointerException, HDF5Exception
+ {
+ assertTrue("H5 open ids is 0", H5.getOpenIDCount() == 0);
+ System.out.print(testname.getMethodName());
+
+ try {
+ fapl_id = H5.H5Pcreate(HDF5Constants.H5P_FILE_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(fapl_id > 0);
+ try {
+ plapl_id = H5.H5Pcreate(HDF5Constants.H5P_LINK_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(plapl_id > 0);
+ try {
+ plist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+ btplist_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_XFER);
+ dapl_id = H5.H5Pcreate(HDF5Constants.H5P_DATASET_ACCESS);
+ }
+ catch (Throwable err) {
+ err.printStackTrace();
+ fail("TestH5Pfapl.createFileAccess: " + err);
+ }
+ assertTrue(plist_id > 0);
+ assertTrue(btplist_id > 0);
+ assertTrue(dapl_id > 0);
+ }
+
+ @After
+ public void deleteFileAccess() throws HDF5LibraryException
+ {
+ if (fapl_id > 0)
+ try {H5.H5Pclose(fapl_id);} catch (Exception ex) {}
+ if (plapl_id > 0)
+ try {H5.H5Pclose(plapl_id);} catch (Exception ex) {}
+ if (dapl_id > 0)
+ try {H5.H5Pclose(dapl_id);} catch (Exception ex) {}
+ if (plist_id > 0)
+ try {H5.H5Pclose(plist_id);} catch (Exception ex) {}
+ if (btplist_id > 0)
+ try {H5.H5Pclose(btplist_id);} catch (Exception ex) {}
+ System.out.println();
+ }
+
+ @Test
+ public void testH5Pset_fapl_ros3() throws Exception
+ {
+ if (HDF5Constants.H5FD_ROS3 < 0)
+ return;
+
+ final H5FD_ros3_fapl_t config = new H5FD_ros3_fapl_t();
+ assertEquals("Default fapl has unexpected contents",
+ new H5FD_ros3_fapl_t("", "", ""), config);
+
+ H5.H5Pset_fapl_ros3(fapl_id, config);
+
+ assertEquals("driver types don't match",
+ HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
+
+ /* get_fapl_ros3 can throw exception in error cases */
+ H5FD_ros3_fapl_t copy = H5.H5Pget_fapl_ros3(fapl_id);
+ assertEquals("contents of fapl set and get don't match",
+ new H5FD_ros3_fapl_t("", "", ""), copy);
+ }
+
+ @Test(expected = HDF5LibraryException.class)
+ public void testH5Pget_fapl_ros3_invalid_fapl_id() throws Exception
+ {
+ if (HDF5Constants.H5FD_ROS3 < 0)
+ throw new HDF5LibraryException("skip");
+ H5FD_ros3_fapl_t fails = H5.H5Pget_fapl_ros3(-1);
+ }
+
+ @Test(expected = HDF5LibraryException.class)
+ public void testH5Pget_fapl_ros3_fapl_id_of_wrong_driver_type() throws Exception
+ {
+ if (HDF5Constants.H5FD_ROS3 < 0)
+ throw new HDF5LibraryException("skip");
+ if (HDF5Constants.H5FD_SEC2 < 0 )
+ throw new HDF5LibraryException("skip");
+ /* TODO: for now, test against a sec2 fapl only */
+
+ H5.H5Pset_fapl_sec2(fapl_id);
+ assertEquals("fapl_id was not set properly",
+ HDF5Constants.H5FD_SEC2, H5.H5Pget_driver(fapl_id));
+ H5FD_ros3_fapl_t fails = H5.H5Pget_fapl_ros3(fapl_id);
+ }
+
+ @Test
+ public void testH5Pset_fapl_ros3_specified() throws Exception
+ {
+ if (HDF5Constants.H5FD_ROS3 < 0)
+ return;
+
+ String region = "us-east-1";
+ String acc_id = "my_access_id";
+ String acc_key = "my_access_key";
+
+ final H5FD_ros3_fapl_t config = new H5FD_ros3_fapl_t(region, acc_id, acc_key);
+ H5.H5Pset_fapl_ros3(fapl_id, config);
+ assertEquals("driver types don't match",
+ HDF5Constants.H5FD_ROS3, H5.H5Pget_driver(fapl_id));
+
+ H5FD_ros3_fapl_t copy = H5.H5Pget_fapl_ros3(fapl_id);
+ assertEquals("contents of fapl set and get don't match",
+ new H5FD_ros3_fapl_t(region, acc_id, acc_key), copy);
+ }
+
+}
diff --git a/java/test/junit.sh.in b/java/test/junit.sh.in
index 1a9b93f..96ea796 100644
--- a/java/test/junit.sh.in
+++ b/java/test/junit.sh.in
@@ -19,6 +19,8 @@ prefix=@prefix@
USE_FILTER_SZIP="@USE_FILTER_SZIP@"
USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@"
+USE_ROS3_VFD="@HAVE_ROS3_VFD@"
+USE_HDFS_VFD="@HAVE_LIBHDFS@"
TESTNAME=JUnitInterface
EXIT_SUCCESS=0
@@ -94,6 +96,8 @@ $HDFTEST_HOME/testfiles/JUnit-TestH5R.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5P.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5PData.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5Pfapl.txt
+$HDFTEST_HOME/testfiles/JUnit-TestH5Pfapls3.txt
+$HDFTEST_HOME/testfiles/JUnit-TestH5Pfaplhdfs.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5Pvirtual.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5Plist.txt
$HDFTEST_HOME/testfiles/JUnit-TestH5A.txt
@@ -1081,6 +1085,50 @@ if test $USE_FILTER_SZIP = "yes"; then
test yes = "$verbose" && $DIFF JUnit-TestH5Giterate.txt JUnit-TestH5Giterate.out |sed 's/^/ /'
fi
fi
+if test "X$ROS3_VFD" = "Xyes"; then
+ echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH -ea org.junit.runner.JUnitCore test.TestH5Pfapls3"
+ TESTING JUnit-TestH5Pfapls3
+ ($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH -ea org.junit.runner.JUnitCore test.TestH5Pfapls3 > JUnit-TestH5Pfapls3.ext)
+
+ # Extract file name, line number, version and thread IDs because they may be different
+ sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \
+ -e 's/line [0-9]*/line (number)/' \
+ -e 's/Time: [0-9]*\.[0-9]*/Time: XXXX/' \
+ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \
+ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \
+ JUnit-TestH5Pfapls3.ext > JUnit-TestH5Pfapls3.out
+
+ if diff JUnit-TestH5Pfapls3.out JUnit-TestH5Pfapls3.txt > /dev/null; then
+ echo " PASSED JUnit-TestH5Pfapls3"
+ else
+ echo "**FAILED** JUnit-TestH5Pfapls3"
+ echo " Expected result differs from actual result"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF JUnit-TestH5Pfapls3.txt JUnit-TestH5Pfapls3.out |sed 's/^/ /'
+ fi
+fi
+if test "X$HAVE_LIBHDFS" = "Xyes"; then
+ echo "$JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH -ea org.junit.runner.JUnitCore test.TestH5Pfaplhdfs"
+ TESTING JUnit-TestH5Pfaplhdfs
+ ($RUNSERIAL $JAVAEXE $JAVAEXEFLAGS -Xmx1024M -Dorg.slf4j.simpleLogger.defaultLog=trace -Djava.library.path=$BLDLIBDIR -cp $CLASSPATH -ea org.junit.runner.JUnitCore test.TestH5Pfaplhdfs > JUnit-TestH5Pfaplhdfs.ext)
+
+ # Extract file name, line number, version and thread IDs because they may be different
+ sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \
+ -e 's/line [0-9]*/line (number)/' \
+ -e 's/Time: [0-9]*\.[0-9]*/Time: XXXX/' \
+ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \
+ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \
+ JUnit-TestH5Pfaplhdfs.ext > JUnit-TestH5Pfaplhdfs.out
+
+ if diff JUnit-TestH5Pfaplhdfs.out JUnit-TestH5Pfaplhdfs.txt > /dev/null; then
+ echo " PASSED JUnit-TestH5Pfaplhdfs"
+ else
+ echo "**FAILED** JUnit-TestH5Pfaplhdfs"
+ echo " Expected result differs from actual result"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF JUnit-TestH5Pfaplhdfs.txt JUnit-TestH5Pfaplhdfs.out |sed 's/^/ /'
+ fi
+fi
# Clean up temporary files/directories
diff --git a/java/test/testfiles/JUnit-TestH5Pfaplhdfs.txt b/java/test/testfiles/JUnit-TestH5Pfaplhdfs.txt
new file mode 100644
index 0000000..47a00a4
--- /dev/null
+++ b/java/test/testfiles/JUnit-TestH5Pfaplhdfs.txt
@@ -0,0 +1,9 @@
+JUnit version 4.11
+.testH5Pget_fapl_hdfs_invalid_fapl_id
+.testH5Pget_fapl_hdfs_fapl_id_of_wrong_driver_type
+.testHDFS_fapl
+
+Time: XXXX
+
+OK (3 tests)
+
diff --git a/java/test/testfiles/JUnit-TestH5Pfapls3.txt b/java/test/testfiles/JUnit-TestH5Pfapls3.txt
new file mode 100644
index 0000000..3f46342
--- /dev/null
+++ b/java/test/testfiles/JUnit-TestH5Pfapls3.txt
@@ -0,0 +1,10 @@
+JUnit version 4.11
+.testH5Pset_fapl_ros3_specified
+.testH5Pset_fapl_ros3
+.testH5Pget_fapl_ros3_invalid_fapl_id
+.testH5Pget_fapl_ros3_fapl_id_of_wrong_driver_type
+
+Time: XXXX
+
+OK (4 tests)
+
generated by cgit v0.12 at 2024-11-03 00:12:33 (GMT)