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-rw-r--r--src/H5AC.c2256
1 files changed, 0 insertions, 2256 deletions
diff --git a/src/H5AC.c b/src/H5AC.c
index c6b0b47..e6218d1 100644
--- a/src/H5AC.c
+++ b/src/H5AC.c
@@ -44,13 +44,10 @@
#include "H5private.h" /* Generic Functions */
#include "H5ACpkg.h" /* Metadata cache */
#include "H5Cpkg.h" /* Cache */
-#include "H5Dprivate.h" /* Dataset functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5Fpkg.h" /* Files */
#include "H5FDprivate.h" /* File drivers */
-#include "H5FLprivate.h" /* Free Lists */
#include "H5Iprivate.h" /* IDs */
-#include "H5MMprivate.h" /* Memory management */
#include "H5Pprivate.h" /* Property lists */
@@ -63,38 +60,6 @@
/* Local Typedefs */
/******************/
-#ifdef H5_HAVE_PARALLEL
-/****************************************************************************
- *
- * structure H5AC_slist_entry_t
- *
- * The dirty entry list maintained via the d_slist_ptr field of H5AC_aux_t
- * and the cleaned entry list maintained via the c_slist_ptr field of
- * H5AC_aux_t are just lists of the file offsets of the dirty/cleaned
- * entries. Unfortunately, the slist code makes us define a dynamically
- * allocated structure to store these offsets in. This structure serves
- * that purpose. Its fields are as follows:
- *
- * addr: file offset of a metadata entry. Entries are added to this
- * list (if they aren't there already) when they are marked
- * dirty in an unprotect, inserted, or moved. They are
- * removed when they appear in a clean entries broadcast.
- *
- ****************************************************************************/
-typedef struct H5AC_slist_entry_t
-{
- haddr_t addr;
-} H5AC_slist_entry_t;
-
-/* User data for address list building callbacks */
-typedef struct H5AC_addr_list_ud_t
-{
- H5AC_aux_t * aux_ptr; /* 'Auxiliary' parallel cache info */
- haddr_t * addr_buf_ptr; /* Array to store addresses */
- int i; /* Counter for position in array */
-} H5AC_addr_list_ud_t;
-#endif /* H5_HAVE_PARALLEL */
-
/********************/
/* Local Prototypes */
@@ -105,39 +70,6 @@ static herr_t H5AC__check_if_write_permitted(const H5F_t *f,
static herr_t H5AC__ext_config_2_int_config(H5AC_cache_config_t *ext_conf_ptr,
H5C_auto_size_ctl_t *int_conf_ptr);
-#ifdef H5_HAVE_PARALLEL
-static herr_t H5AC__broadcast_candidate_list(H5AC_t *cache_ptr,
- int *num_entries_ptr, haddr_t **haddr_buf_ptr_ptr);
-static herr_t H5AC__broadcast_clean_list(H5AC_t *cache_ptr);
-static herr_t H5AC__construct_candidate_list(H5AC_t *cache_ptr,
- H5AC_aux_t *aux_ptr, int sync_point_op);
-static herr_t H5AC__copy_candidate_list_to_buffer(const H5AC_t *cache_ptr,
- int *num_entries_ptr, haddr_t **haddr_buf_ptr_ptr);
-static herr_t H5AC__flush_entries(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__log_deleted_entry(const H5AC_info_t *entry_ptr);
-static herr_t H5AC__log_dirtied_entry(const H5AC_info_t *entry_ptr);
-static herr_t H5AC__log_flushed_entry(H5C_t *cache_ptr, haddr_t addr,
- hbool_t was_dirty, unsigned flags);
-static herr_t H5AC__log_inserted_entry(const H5AC_info_t *entry_ptr);
-static herr_t H5AC__log_moved_entry(const H5F_t *f, haddr_t old_addr,
- haddr_t new_addr);
-static herr_t H5AC__propagate_and_apply_candidate_list(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__propagate_flushed_and_still_clean_entries_list(H5F_t *f,
- hid_t dxpl_id);
-static herr_t H5AC__receive_haddr_list(MPI_Comm mpi_comm, int *num_entries_ptr,
- haddr_t **haddr_buf_ptr_ptr);
-static herr_t H5AC__receive_candidate_list(const H5AC_t *cache_ptr,
- int *num_entries_ptr, haddr_t **haddr_buf_ptr_ptr);
-static herr_t H5AC__receive_and_apply_clean_list(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__tidy_cache_0_lists(H5AC_t *cache_ptr, int num_candidates,
- haddr_t *candidates_list_ptr);
-static herr_t H5AC__rsp__dist_md_write__flush(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__rsp__dist_md_write__flush_to_min_clean(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__rsp__p0_only__flush(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__rsp__p0_only__flush_to_min_clean(H5F_t *f, hid_t dxpl_id);
-static herr_t H5AC__run_sync_point(H5F_t *f, hid_t dxpl_id, int sync_point_op);
-#endif /* H5_HAVE_PARALLEL */
-
/*********************/
/* Package Variables */
@@ -164,14 +96,6 @@ hid_t H5AC_ind_dxpl_id = (-1);
/* Local Variables */
/*******************/
-#ifdef H5_HAVE_PARALLEL
-/* Declare a free list to manage the H5AC_aux_t struct */
-H5FL_DEFINE_STATIC(H5AC_aux_t);
-
-/* Declare a free list to manage the H5AC_slist_entry_t struct */
-H5FL_DEFINE_STATIC(H5AC_slist_entry_t);
-#endif /* H5_HAVE_PARALLEL */
-
static const char *H5AC_entry_type_names[H5AC_NTYPES] =
{
"B-tree nodes",
@@ -1490,78 +1414,6 @@ done:
FUNC_LEAVE_NOAPI(ret_value)
} /* H5AC_unprotect() */
-
-/*-------------------------------------------------------------------------
- * Function: HA5C_set_sync_point_done_callback
- *
- * Purpose: Set the value of the sync_point_done callback. This
- * callback is used by the parallel test code to verify
- * that the expected writes and only the expected writes
- * take place during a sync point.
- *
- * Return: Non-negative on success/Negative on failure
- *
- * Programmer: John Mainzer
- * 5/9/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-herr_t
-H5AC_set_sync_point_done_callback(H5C_t * cache_ptr,
- void (* sync_point_done)(int num_writes, haddr_t * written_entries_tbl))
-{
- H5AC_aux_t * aux_ptr;
-
- FUNC_ENTER_NOAPI_NOINIT_NOERR
-
- /* Sanity checks */
- HDassert(cache_ptr && (cache_ptr->magic == H5C__H5C_T_MAGIC));
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
-
- aux_ptr->sync_point_done = sync_point_done;
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC_set_sync_point_done_callback() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: HA5C_set_write_done_callback
- *
- * Purpose: Set the value of the write_done callback. This callback
- * is used to improve performance of the parallel test bed
- * for the cache.
- *
- * Return: Non-negative on success/Negative on failure
- *
- * Programmer: John Mainzer
- * 5/11/06
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-herr_t
-H5AC_set_write_done_callback(H5C_t * cache_ptr, void (* write_done)(void))
-{
- H5AC_aux_t * aux_ptr;
-
- FUNC_ENTER_NOAPI_NOINIT_NOERR
-
- /* Sanity checks */
- HDassert(cache_ptr && (cache_ptr->magic == H5C__H5C_T_MAGIC));
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert( aux_ptr != NULL );
- HDassert( aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC );
-
- aux_ptr->write_done = write_done;
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC_set_write_done_callback() */
-#endif /* H5_HAVE_PARALLEL */
-
#ifndef NDEBUG /* debugging functions */
/*-------------------------------------------------------------------------
@@ -2119,64 +1971,6 @@ done:
} /* H5AC_open_trace_file() */
-/*-------------------------------------------------------------------------
- * Function: H5AC_add_candidate()
- *
- * Purpose: Add the supplied metadata entry address to the candidate
- * list. Verify that each entry added does not appear in
- * the list prior to its insertion.
- *
- * This function is intended for used in constructing list
- * of entried to be flushed during sync points. It shouldn't
- * be called anywhere else.
- *
- * Return: Non-negative on success/Negative on failure
- *
- * Programmer: John Mainzer
- * 3/17/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-herr_t
-H5AC_add_candidate(H5AC_t * cache_ptr, haddr_t addr)
-{
- H5AC_aux_t * aux_ptr;
- H5AC_slist_entry_t * slist_entry_ptr = NULL;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_NOAPI(FAIL)
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert(aux_ptr->candidate_slist_ptr != NULL);
-
- /* Construct an entry for the supplied address, and insert
- * it into the candidate slist.
- */
- if(NULL == (slist_entry_ptr = H5FL_MALLOC(H5AC_slist_entry_t)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate candidate slist entry")
- slist_entry_ptr->addr = addr;
-
- if(H5SL_insert(aux_ptr->candidate_slist_ptr, slist_entry_ptr, &(slist_entry_ptr->addr)) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTINSERT, FAIL, "can't insert entry into dirty entry slist")
-
-done:
- /* Clean up on error */
- if(ret_value < 0)
- if(slist_entry_ptr)
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC_add_candidate() */
-#endif /* H5_HAVE_PARALLEL */
-
-
/*************************************************************************/
/*************************** Debugging Functions: ************************/
/*************************************************************************/
@@ -2288,236 +2082,6 @@ done:
/**************************** Private Functions: *************************/
/*************************************************************************/
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__broadcast_candidate_list()
- *
- * Purpose: Broadcast the contents of the process 0 candidate entry
- * slist. In passing, also remove all entries from said
- * list. As the application of this will be handled by
- * the same functions on all processes, construct and
- * return a copy of the list in the same format as that
- * received by the other processes. Note that if this
- * copy is returned in *haddr_buf_ptr_ptr, the caller
- * must free it.
- *
- * This function must only be called by the process with
- * MPI_rank 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 7/1/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__broadcast_candidate_list(H5AC_t *cache_ptr, int *num_entries_ptr,
- haddr_t **haddr_buf_ptr_ptr)
-{
- H5AC_aux_t * aux_ptr = NULL;
- haddr_t * haddr_buf_ptr = NULL;
- int mpi_result;
- int num_entries;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank == 0);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert(aux_ptr->candidate_slist_ptr != NULL);
- HDassert(num_entries_ptr != NULL);
- HDassert(*num_entries_ptr == 0);
- HDassert(haddr_buf_ptr_ptr != NULL);
- HDassert(*haddr_buf_ptr_ptr == NULL);
-
- /* First broadcast the number of entries in the list so that the
- * receivers can set up buffers to receive them. If there aren't
- * any, we are done.
- */
- num_entries = (int)H5SL_count(aux_ptr->candidate_slist_ptr);
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast(&num_entries, 1, MPI_INT, 0, aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
-
- if(num_entries > 0) {
- size_t buf_size = 0;
- int chk_num_entries = 0;
-
- /* convert the candidate list into the format we
- * are used to receiving from process 0, and also load it
- * into a buffer for transmission.
- */
- if(H5AC__copy_candidate_list_to_buffer(cache_ptr, &chk_num_entries, &haddr_buf_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't construct candidate buffer.")
- HDassert(chk_num_entries == num_entries);
- HDassert(haddr_buf_ptr != NULL);
-
- /* Now broadcast the list of candidate entries */
- buf_size = sizeof(haddr_t) * (size_t)num_entries;
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast((void *)haddr_buf_ptr, (int)buf_size, MPI_BYTE, 0, aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
- } /* end if */
-
- /* Pass the number of entries and the buffer pointer
- * back to the caller. Do this so that we can use the same code
- * to apply the candidate list to all the processes.
- */
- *num_entries_ptr = num_entries;
- *haddr_buf_ptr_ptr = haddr_buf_ptr;
-
-done:
- if(ret_value < 0)
- if(haddr_buf_ptr)
- haddr_buf_ptr = (haddr_t *)H5MM_xfree((void *)haddr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__broadcast_candidate_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__broadcast_clean_list_cb()
- *
- * Purpose: Skip list callback for building array of addresses for
- * broadcasting the clean list.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: Quincey Koziol, 6/12/15
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__broadcast_clean_list_cb(void *_item, void H5_ATTR_UNUSED *_key,
- void *_udata)
-{
- H5AC_slist_entry_t * slist_entry_ptr = (H5AC_slist_entry_t *)_item; /* Address of item */
- H5AC_addr_list_ud_t * udata = (H5AC_addr_list_ud_t *)_udata; /* Context for callback */
- haddr_t addr;
-
- FUNC_ENTER_STATIC_NOERR
-
- /* Sanity checks */
- HDassert(slist_entry_ptr);
- HDassert(udata);
-
- /* Store the entry's address in the buffer */
- addr = slist_entry_ptr->addr;
- udata->addr_buf_ptr[udata->i] = addr;
- udata->i++;
-
- /* now release the entry */
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- /* and also remove the matching entry from the dirtied list
- * if it exists.
- */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(udata->aux_ptr->d_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC__broadcast_clean_list_cb() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__broadcast_clean_list()
- *
- * Purpose: Broadcast the contents of the process 0 cleaned entry
- * slist. In passing, also remove all entries from said
- * list, and also remove any matching entries from the dirtied
- * slist.
- *
- * This function must only be called by the process with
- * MPI_rank 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 7/1/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__broadcast_clean_list(H5AC_t * cache_ptr)
-{
- haddr_t * addr_buf_ptr = NULL;
- H5AC_aux_t * aux_ptr;
- int mpi_result;
- int num_entries = 0;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)cache_ptr->aux_ptr;
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank == 0);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- /* First broadcast the number of entries in the list so that the
- * receives can set up a buffer to receive them. If there aren't
- * any, we are done.
- */
- num_entries = (int)H5SL_count(aux_ptr->c_slist_ptr);
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast(&num_entries, 1, MPI_INT, 0, aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
-
- if(num_entries > 0) {
- H5AC_addr_list_ud_t udata;
- size_t buf_size;
-
- /* allocate a buffer to store the list of entry base addresses in */
- buf_size = sizeof(haddr_t) * (size_t)num_entries;
- if(NULL == (addr_buf_ptr = (haddr_t *)H5MM_malloc(buf_size)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "memory allocation failed for addr buffer")
-
- /* Set up user data for callback */
- udata.aux_ptr = aux_ptr;
- udata.addr_buf_ptr = addr_buf_ptr;
- udata.i = 0;
-
- /* Free all the clean list entries, building the address list in the callback */
- /* (Callback also removes the matching entries from the dirtied list) */
- if(H5SL_free(aux_ptr->c_slist_ptr, H5AC__broadcast_clean_list_cb, &udata) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFREE, FAIL, "Can't build address list for clean entries")
-
- /* Now broadcast the list of cleaned entries */
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast((void *)addr_buf_ptr, (int)buf_size, MPI_BYTE, 0, aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
- } /* end if */
-
- /* if it is defined, call the sync point done callback. Note
- * that this callback is defined purely for testing purposes,
- * and should be undefined under normal operating circumstances.
- */
- if(aux_ptr->sync_point_done)
- (aux_ptr->sync_point_done)(num_entries, addr_buf_ptr);
-
-done:
- if(addr_buf_ptr)
- addr_buf_ptr = (haddr_t *)H5MM_xfree((void *)addr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__broadcast_clean_list() */
-#endif /* H5_HAVE_PARALLEL */
-
/*-------------------------------------------------------------------------
*
@@ -2575,202 +2139,6 @@ H5_ATTR_UNUSED
/*-------------------------------------------------------------------------
- * Function: H5AC__construct_candidate_list()
- *
- * Purpose: In the parallel case when the metadata_write_strategy is
- * H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, process 0 uses
- * this function to construct the list of cache entries to
- * be flushed. This list is then propagated to the other
- * caches, and then flushed in a distributed fashion.
- *
- * The sync_point_op parameter is used to determine the extent
- * of the flush.
- *
- * Return: Non-negative on success/Negative on failure
- *
- * Programmer: John Mainzer
- * 3/17/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__construct_candidate_list(H5AC_t *cache_ptr, H5AC_aux_t *aux_ptr,
- int sync_point_op)
-{
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert((sync_point_op == H5AC_SYNC_POINT_OP__FLUSH_CACHE) || (aux_ptr->mpi_rank == 0));
- HDassert(aux_ptr->d_slist_ptr != NULL);
- HDassert(aux_ptr->c_slist_ptr != NULL);
- HDassert(H5SL_count(aux_ptr->c_slist_ptr) == 0);
- HDassert(aux_ptr->candidate_slist_ptr != NULL);
- HDassert(H5SL_count(aux_ptr->candidate_slist_ptr) == 0);
- HDassert((sync_point_op == H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN) || (sync_point_op == H5AC_SYNC_POINT_OP__FLUSH_CACHE));
-
- switch(sync_point_op) {
- case H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN:
- if(H5C_construct_candidate_list__min_clean((H5C_t *)cache_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5C_construct_candidate_list__min_clean() failed.")
- break;
-
- case H5AC_SYNC_POINT_OP__FLUSH_CACHE:
- if(H5C_construct_candidate_list__clean_cache((H5C_t *)cache_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5C_construct_candidate_list__clean_cache() failed.")
- break;
-
- default:
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "unknown sync point operation.")
- break;
- } /* end switch */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__construct_candidate_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__copy_candidate_list_to_buffer_cb
- *
- * Purpose: Skip list callback for building array of addresses for
- * broadcasting the candidate list.
- *
- * Return: Return SUCCEED on success, and FAIL on failure.
- *
- * Programmer: Quincey Koziol, 6/12/15
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__copy_candidate_list_to_buffer_cb(void *_item, void H5_ATTR_UNUSED *_key,
- void *_udata)
-{
- H5AC_slist_entry_t * slist_entry_ptr = (H5AC_slist_entry_t *)_item; /* Address of item */
- H5AC_addr_list_ud_t * udata = (H5AC_addr_list_ud_t *)_udata; /* Context for callback */
-
- FUNC_ENTER_STATIC_NOERR
-
- /* Sanity checks */
- HDassert(slist_entry_ptr);
- HDassert(udata);
-
- /* Store the entry's address in the buffer */
- udata->addr_buf_ptr[udata->i] = slist_entry_ptr->addr;
- udata->i++;
-
- /* now release the entry */
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC__copy_candidate_list_to_buffer_cb() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__copy_candidate_list_to_buffer
- *
- * Purpose: Allocate buffer(s) and copy the contents of the candidate
- * entry slist into it (them). In passing, remove all
- * entries from the candidate slist. Note that the
- * candidate slist must not be empty.
- *
- * If MPI_Offset_buf_ptr_ptr is not NULL, allocate a buffer
- * of MPI_Offset, copy the contents of the candidate
- * entry list into it with the appropriate conversions,
- * and return the base address of the buffer in
- * *MPI_Offset_buf_ptr. Note that this is the buffer
- * used by process 0 to transmit the list of entries to
- * be flushed to all other processes (in this file group).
- *
- * Similarly, allocate a buffer of haddr_t, load the contents
- * of the candidate list into this buffer, and return its
- * base address in *haddr_buf_ptr_ptr. Note that this
- * latter buffer is constructed unconditionally.
- *
- * In passing, also remove all entries from the candidate
- * entry slist.
- *
- * Return: Return SUCCEED on success, and FAIL on failure.
- *
- * Programmer: John Mainzer, 4/19/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__copy_candidate_list_to_buffer(const H5AC_t *cache_ptr, int *num_entries_ptr,
- haddr_t **haddr_buf_ptr_ptr)
-{
- H5AC_aux_t * aux_ptr = NULL;
- H5AC_addr_list_ud_t udata;
- haddr_t * haddr_buf_ptr = NULL;
- size_t buf_size;
- int num_entries = 0;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert(aux_ptr->candidate_slist_ptr != NULL);
- HDassert(H5SL_count(aux_ptr->candidate_slist_ptr) > 0);
- HDassert(num_entries_ptr != NULL);
- HDassert(*num_entries_ptr == 0);
- HDassert(haddr_buf_ptr_ptr != NULL);
- HDassert(*haddr_buf_ptr_ptr == NULL);
-
- num_entries = (int)H5SL_count(aux_ptr->candidate_slist_ptr);
-
- /* allocate a buffer(s) to store the list of candidate entry
- * base addresses in
- */
- buf_size = sizeof(haddr_t) * (size_t)num_entries;
- if(NULL == (haddr_buf_ptr = (haddr_t *)H5MM_malloc(buf_size)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "memory allocation failed for haddr buffer")
-
- /* Set up user data for callback */
- udata.aux_ptr = aux_ptr;
- udata.addr_buf_ptr = haddr_buf_ptr;
- udata.i = 0;
-
- /* Free all the candidate list entries, building the address list in the callback */
- if(H5SL_free(aux_ptr->candidate_slist_ptr, H5AC__copy_candidate_list_to_buffer_cb, &udata) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFREE, FAIL, "Can't build address list for candidate entries")
-
- /* Pass the number of entries and the buffer pointer
- * back to the caller.
- */
- *num_entries_ptr = num_entries;
- *haddr_buf_ptr_ptr = haddr_buf_ptr;
-
-done:
- if(ret_value < 0)
- if(haddr_buf_ptr)
- haddr_buf_ptr = (haddr_t *)H5MM_xfree((void *)haddr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__copy_candidate_list_to_buffer() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
* Function: H5AC__ext_config_2_int_config()
*
* Purpose: Utility function to translate an instance of
@@ -2836,1630 +2204,6 @@ done:
} /* H5AC__ext_config_2_int_config() */
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__log_deleted_entry()
- *
- * Purpose: Log an entry which has been deleted.
- *
- * Only called for mpi_rank 0. We must make sure that the entry
- * doesn't appear in the cleaned or dirty entry lists.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 6/29/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__log_deleted_entry(const H5AC_info_t *entry_ptr)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- H5AC_slist_entry_t * slist_entry_ptr = NULL;
- haddr_t addr;
-
- FUNC_ENTER_STATIC_NOERR
-
- /* Sanity checks */
- HDassert(entry_ptr);
- addr = entry_ptr->addr;
- cache_ptr = entry_ptr->cache_ptr;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank == 0);
- HDassert(aux_ptr->d_slist_ptr != NULL);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- /* if the entry appears in the dirtied entry slist, remove it. */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->d_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- /* if the entry appears in the cleaned entry slist, remove it. */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->c_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC__log_deleted_entry() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__log_dirtied_entry()
- *
- * Purpose: Update the dirty_bytes count for a newly dirtied entry.
- *
- * If mpi_rank isn't 0, this simply means adding the size
- * of the entries to the dirty_bytes count.
- *
- * If mpi_rank is 0, we must first check to see if the entry
- * appears in the dirty entries slist. If it is, do nothing.
- * If it isn't, add the size to th dirty_bytes count, add the
- * entry to the dirty entries slist, and remove it from the
- * cleaned list (if it is present there).
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 6/29/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__log_dirtied_entry(const H5AC_info_t *entry_ptr)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(entry_ptr);
- HDassert(entry_ptr->is_dirty == FALSE);
- cache_ptr = entry_ptr->cache_ptr;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
-
- if(aux_ptr->mpi_rank == 0) {
- H5AC_slist_entry_t *slist_entry_ptr;
- haddr_t addr = entry_ptr->addr;
-
- /* Sanity checks */
- HDassert(aux_ptr->d_slist_ptr != NULL);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- if(NULL == H5SL_search(aux_ptr->d_slist_ptr, (void *)(&addr))) {
- /* insert the address of the entry in the dirty entry list, and
- * add its size to the dirty_bytes count.
- */
- if(NULL == (slist_entry_ptr = H5FL_MALLOC(H5AC_slist_entry_t)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate dirty slist entry .")
- slist_entry_ptr->addr = addr;
-
- if(H5SL_insert(aux_ptr->d_slist_ptr, slist_entry_ptr, &(slist_entry_ptr->addr)) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTINSERT, FAIL, "can't insert entry into dirty entry slist.")
-
- aux_ptr->dirty_bytes += entry_ptr->size;
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->unprotect_dirty_bytes += entry_ptr->size;
- aux_ptr->unprotect_dirty_bytes_updates += 1;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
- } /* end if */
-
- /* the entry is dirty. If it exists on the cleaned entries list,
- * remove it.
- */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->c_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
- } /* end if */
- else {
- aux_ptr->dirty_bytes += entry_ptr->size;
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->unprotect_dirty_bytes += entry_size;
- aux_ptr->unprotect_dirty_bytes_updates += 1;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
- } /* end else */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__log_dirtied_entry() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__log_flushed_entry()
- *
- * Purpose: Update the clean entry slist for the flush of an entry --
- * specifically, if the entry has been cleared, remove it
- * from both the cleaned and dirtied lists if it is present.
- * Otherwise, if the entry was dirty, insert the indicated
- * entry address in the clean slist if it isn't there already.
- *
- * This function is only used in PHDF5, and should only
- * be called for the process with mpi rank 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 6/29/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__log_flushed_entry(H5C_t *cache_ptr, haddr_t addr, hbool_t was_dirty,
- unsigned flags)
-{
- hbool_t cleared;
- H5AC_aux_t * aux_ptr;
- H5AC_slist_entry_t * slist_entry_ptr = NULL;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity check */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank == 0);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- /* Set local flags */
- cleared = ((flags & H5C__FLUSH_CLEAR_ONLY_FLAG) != 0);
-
- if(cleared) {
- /* If the entry has been cleared, must remove it from both the
- * cleaned list and the dirtied list.
- */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->c_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->d_slist_ptr, (void *)(&addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
- } /* end if */
- else if(was_dirty) {
- if(NULL == H5SL_search(aux_ptr->c_slist_ptr, (void *)(&addr))) {
- /* insert the address of the entry in the clean entry list. */
- if(NULL == (slist_entry_ptr = H5FL_MALLOC(H5AC_slist_entry_t)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate clean slist entry .")
- slist_entry_ptr->addr = addr;
-
- if(H5SL_insert(aux_ptr->c_slist_ptr, slist_entry_ptr, &(slist_entry_ptr->addr)) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTINSERT, FAIL, "can't insert entry into clean entry slist.")
- } /* end if */
- } /* end else-if */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__log_flushed_entry() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__log_inserted_entry()
- *
- * Purpose: Update the dirty_bytes count for a newly inserted entry.
- *
- * If mpi_rank isnt 0, this simply means adding the size
- * of the entry to the dirty_bytes count.
- *
- * If mpi_rank is 0, we must also add the entry to the
- * dirty entries slist.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 6/30/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__log_inserted_entry(const H5AC_info_t *entry_ptr)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(entry_ptr);
- cache_ptr = entry_ptr->cache_ptr;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
-
- if(aux_ptr->mpi_rank == 0) {
- H5AC_slist_entry_t *slist_entry_ptr;
-
- HDassert(aux_ptr->d_slist_ptr != NULL);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- /* Entry to insert should not be in dirty list currently */
- if(NULL != H5SL_search(aux_ptr->d_slist_ptr, (const void *)(&entry_ptr->addr)))
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Inserted entry already in dirty slist.")
-
- /* insert the address of the entry in the dirty entry list, and
- * add its size to the dirty_bytes count.
- */
- if(NULL == (slist_entry_ptr = H5FL_MALLOC(H5AC_slist_entry_t)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate dirty slist entry .")
- slist_entry_ptr->addr = entry_ptr->addr;
- if(H5SL_insert(aux_ptr->d_slist_ptr, slist_entry_ptr, &(slist_entry_ptr->addr)) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTINSERT, FAIL, "can't insert entry into dirty entry slist.")
-
- /* Entry to insert should not be in clean list either */
- if(NULL != H5SL_search(aux_ptr->c_slist_ptr, (const void *)(&entry_ptr->addr)))
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Inserted entry in clean slist.")
- } /* end if */
-
- aux_ptr->dirty_bytes += entry_ptr->size;
-
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->insert_dirty_bytes += size;
- aux_ptr->insert_dirty_bytes_updates += 1;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__log_inserted_entry() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__log_moved_entry()
- *
- * Purpose: Update the dirty_bytes count for a moved entry.
- *
- * WARNING
- *
- * At present, the way that the move call is used ensures
- * that the moved entry is present in all caches by
- * moving in a collective operation and immediately after
- * unprotecting the target entry.
- *
- * This function uses this invariant, and will cause arcane
- * failures if it is not met. If maintaining this invariant
- * becomes impossible, we will have to rework this function
- * extensively, and likely include a bit of IPC for
- * synchronization. A better option might be to subsume
- * move in the unprotect operation.
- *
- * Given that the target entry is in all caches, the function
- * proceeds as follows:
- *
- * For processes with mpi rank other 0, it simply checks to
- * see if the entry was dirty prior to the move, and adds
- * the entries size to the dirty bytes count.
- *
- * In the process with mpi rank 0, the function first checks
- * to see if the entry was dirty prior to the move. If it
- * was, and if the entry doesn't appear in the dirtied list
- * under its old address, it adds the entry's size to the
- * dirty bytes count.
- *
- * The rank 0 process then removes any references to the
- * entry under its old address from the cleands and dirtied
- * lists, and inserts an entry in the dirtied list under the
- * new address.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 6/30/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__log_moved_entry(const H5F_t *f, haddr_t old_addr, haddr_t new_addr)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- hbool_t entry_in_cache;
- hbool_t entry_dirty;
- size_t entry_size;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f);
- HDassert(f->shared);
- cache_ptr = (H5AC_t *)f->shared->cache;
- HDassert(cache_ptr);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
-
- /* get entry status, size, etc here */
- if(H5C_get_entry_status(f, old_addr, &entry_size, &entry_in_cache,
- &entry_dirty, NULL, NULL, NULL, NULL) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't get entry status.")
- if(!entry_in_cache)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "entry not in cache.")
-
- if(aux_ptr->mpi_rank == 0) {
- H5AC_slist_entry_t * slist_entry_ptr;
-
- HDassert(aux_ptr->d_slist_ptr != NULL);
- HDassert(aux_ptr->c_slist_ptr != NULL);
-
- /* if the entry appears in the cleaned entry slist, under its old
- * address, remove it.
- */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->c_slist_ptr, (void *)(&old_addr))))
- slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, slist_entry_ptr);
-
- /* if the entry appears in the dirtied entry slist under its old
- * address, remove it, but don't free it. Set addr to new_addr.
- */
- if(NULL != (slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->d_slist_ptr, (void *)(&old_addr))))
- slist_entry_ptr->addr = new_addr;
- else {
- /* otherwise, allocate a new entry that is ready
- * for insertion, and increment dirty_bytes.
- *
- * Note that the fact that the entry wasn't in the dirtied
- * list under its old address implies that it must have
- * been clean to start with.
- */
- HDassert(!entry_dirty);
- if(NULL == (slist_entry_ptr = H5FL_MALLOC(H5AC_slist_entry_t)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "Can't allocate dirty slist entry .")
- slist_entry_ptr->addr = new_addr;
-
- aux_ptr->dirty_bytes += entry_size;
-
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->move_dirty_bytes += entry_size;
- aux_ptr->move_dirty_bytes_updates += 1;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
- } /* end else */
-
- /* insert / reinsert the entry in the dirty slist */
- if(H5SL_insert(aux_ptr->d_slist_ptr, slist_entry_ptr, &(slist_entry_ptr->addr)) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTINSERT, FAIL, "can't insert entry into dirty entry slist.")
- } /* end if */
- else if(!entry_dirty) {
- aux_ptr->dirty_bytes += entry_size;
-
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->move_dirty_bytes += entry_size;
- aux_ptr->move_dirty_bytes_updates += 1;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
- } /* end else-if */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__log_moved_entry() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__propagate_and_apply_candidate_list
- *
- * Purpose: Prior to the addition of support for multiple metadata
- * write strategies, in PHDF5, only the metadata cache with
- * mpi rank 0 was allowed to write to file. All other
- * metadata caches on processes with rank greater than 0
- * were required to retain dirty entries until they were
- * notified that the entry was clean.
- *
- * This constraint is relaxed with the distributed
- * metadata write strategy, in which a list of candidate
- * metadata cache entries is constructed by the process 0
- * cache and then distributed to the caches of all the other
- * processes. Once the listed is distributed, many (if not
- * all) processes writing writing a unique subset of the
- * entries, and marking the remainder clean. The subsets
- * are chosen so that each entry in the list of candidates
- * is written by exactly one cache, and all entries are
- * marked as being clean in all caches.
- *
- * While the list of candidate cache entries is prepared
- * elsewhere, this function is the main routine for distributing
- * and applying the list. It must be run simultaniously on
- * all processes that have the relevant file open. To ensure
- * proper synchronization, there is a barrier at the beginning
- * of this function.
- *
- * At present, this function is called under one of two
- * circumstances:
- *
- * 1) Dirty byte creation exceeds some user specified value.
- *
- * While metadata reads may occur independently, all
- * operations writing metadata must be collective. Thus
- * all metadata caches see the same sequence of operations,
- * and therefore the same dirty data creation.
- *
- * This fact is used to synchronize the caches for purposes
- * of propagating the list of candidate entries, by simply
- * calling this function from all caches whenever some user
- * specified threshold on dirty data is exceeded. (the
- * process 0 cache creates the candidate list just before
- * calling this function).
- *
- * 2) Under direct user control -- this operation must be
- * collective.
- *
- * The operations to be managed by this function are as
- * follows:
- *
- * All processes:
- *
- * 1) Participate in an opening barrier.
- *
- * For the process with mpi rank 0:
- *
- * 1) Load the contents of the candidate list
- * (candidate_slist_ptr) into a buffer, and broadcast that
- * buffer to all the other caches. Clear the candidate
- * list in passing.
- *
- * If there is a positive number of candidates, proceed with
- * the following:
- *
- * 2) Apply the candidate entry list.
- *
- * 3) Particpate in a closing barrier.
- *
- * 4) Remove from the dirty list (d_slist_ptr) and from the
- * flushed and still clean entries list (c_slist_ptr),
- * all addresses that appeared in the candidate list, as
- * these entries are now clean.
- *
- *
- * For all processes with mpi rank greater than 0:
- *
- * 1) Receive the candidate entry list broadcast
- *
- * If there is a positive number of candidates, proceed with
- * the following:
- *
- * 2) Apply the candidate entry list.
- *
- * 3) Particpate in a closing barrier.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * 3/17/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__propagate_and_apply_candidate_list(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- haddr_t * candidates_list_ptr = NULL;
- int mpi_result;
- int num_candidates = 0;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
-
- /* to prevent "messages from the future" we must synchronize all
- * processes before we write any entries.
- */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- if(aux_ptr->mpi_rank == 0) {
- if(H5AC__broadcast_candidate_list(cache_ptr, &num_candidates, &candidates_list_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't broadcast candidate slist.")
-
- HDassert(H5SL_count(aux_ptr->candidate_slist_ptr) == 0);
- } /* end if */
- else {
- if(H5AC__receive_candidate_list(cache_ptr, &num_candidates, &candidates_list_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't receive candidate broadcast.")
- } /* end else */
-
- if(num_candidates > 0) {
- herr_t result;
-
- /* all processes apply the candidate list.
- * H5C_apply_candidate_list() handles the details of
- * distributing the writes across the processes.
- */
-
- /* Enable writes during this operation */
- aux_ptr->write_permitted = TRUE;
-
- /* Apply the candidate list */
- result = H5C_apply_candidate_list(f, dxpl_id, cache_ptr, num_candidates,
- candidates_list_ptr, aux_ptr->mpi_rank, aux_ptr->mpi_size);
-
- /* Disable writes again */
- aux_ptr->write_permitted = FALSE;
-
- /* Check for error on the write operation */
- if(result < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't apply candidate list.")
-
- /* this code exists primarily for the test bed -- it allows us to
- * enforce posix semantics on the server that pretends to be a
- * file system in our parallel tests.
- */
- if(aux_ptr->write_done)
- (aux_ptr->write_done)();
-
- /* to prevent "messages from the past" we must synchronize all
- * processes again before we go on.
- */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- /* if this is process zero, tidy up the dirtied,
- * and flushed and still clean lists.
- */
- if(aux_ptr->mpi_rank == 0)
- if(H5AC__tidy_cache_0_lists(cache_ptr, num_candidates, candidates_list_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't tidy up process 0 lists.")
- } /* end if */
-
- /* if it is defined, call the sync point done callback. Note
- * that this callback is defined purely for testing purposes,
- * and should be undefined under normal operating circumstances.
- */
- if(aux_ptr->sync_point_done)
- (aux_ptr->sync_point_done)(num_candidates, candidates_list_ptr);
-
-done:
- if(candidates_list_ptr)
- candidates_list_ptr = (haddr_t *)H5MM_xfree((void *)candidates_list_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__propagate_and_apply_candidate_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__propagate_flushed_and_still_clean_entries_list
- *
- * Purpose: In PHDF5, if the process 0 only metadata write strategy
- * is selected, only the metadata cache with mpi rank 0 is
- * allowed to write to file. All other metadata caches on
- * processes with rank greater than 0 must retain dirty
- * entries until they are notified that the entry is now
- * clean.
- *
- * This function is the main routine for handling this
- * notification proceedure. It must be called
- * simultaniously on all processes that have the relevant
- * file open. To this end, it is called only during a
- * sync point, with a barrier prior to the call.
- *
- * Note that any metadata entry writes by process 0 will
- * occur after the barrier and just before this call.
- *
- * Typicaly, calls to this function will be triggered in
- * one of two ways:
- *
- * 1) Dirty byte creation exceeds some user specified value.
- *
- * While metadata reads may occur independently, all
- * operations writing metadata must be collective. Thus
- * all metadata caches see the same sequence of operations,
- * and therefore the same dirty data creation.
- *
- * This fact is used to synchronize the caches for purposes
- * of propagating the list of flushed and still clean
- * entries, by simply calling this function from all
- * caches whenever some user specified threshold on dirty
- * data is exceeded.
- *
- * 2) Under direct user control -- this operation must be
- * collective.
- *
- * The operations to be managed by this function are as
- * follows:
- *
- * For the process with mpi rank 0:
- *
- * 1) Load the contents of the flushed and still clean entries
- * list (c_slist_ptr) into a buffer, and broadcast that
- * buffer to all the other caches.
- *
- * 2) Clear the flushed and still clean entries list
- * (c_slist_ptr).
- *
- *
- * For all processes with mpi rank greater than 0:
- *
- * 1) Receive the flushed and still clean entries list broadcast
- *
- * 2) Mark the specified entries as clean.
- *
- *
- * For all processes:
- *
- * 1) Reset the dirtied bytes count to 0.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * July 5, 2005
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__propagate_flushed_and_still_clean_entries_list(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY);
-
- if(aux_ptr->mpi_rank == 0) {
- if(H5AC__broadcast_clean_list(cache_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't broadcast clean slist.")
- HDassert(H5SL_count(aux_ptr->c_slist_ptr) == 0);
- } /* end if */
- else {
- if(H5AC__receive_and_apply_clean_list(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't receive and/or process clean slist broadcast.")
- } /* end else */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__propagate_flushed_and_still_clean_entries_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC_receive_haddr_list()
- *
- * Purpose: Receive the list of entry addresses from process 0,
- * and return it in a buffer pointed to by *haddr_buf_ptr_ptr.
- * Note that the caller must free this buffer if it is
- * returned.
- *
- * This function must only be called by the process with
- * MPI_rank greater than 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: Quincey Koziol, 6/11/2015
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__receive_haddr_list(MPI_Comm mpi_comm, int *num_entries_ptr,
- haddr_t **haddr_buf_ptr_ptr)
-{
- haddr_t * haddr_buf_ptr = NULL;
- int mpi_result;
- int num_entries;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(num_entries_ptr != NULL);
- HDassert(*num_entries_ptr == 0);
- HDassert(haddr_buf_ptr_ptr != NULL);
- HDassert(*haddr_buf_ptr_ptr == NULL);
-
- /* First receive the number of entries in the list so that we
- * can set up a buffer to receive them. If there aren't
- * any, we are done.
- */
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast(&num_entries, 1, MPI_INT, 0, mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
-
- if(num_entries > 0) {
- size_t buf_size;
-
- /* allocate buffers to store the list of entry base addresses in */
- buf_size = sizeof(haddr_t) * (size_t)num_entries;
- if(NULL == (haddr_buf_ptr = (haddr_t *)H5MM_malloc(buf_size)))
- HGOTO_ERROR(H5E_CACHE, H5E_CANTALLOC, FAIL, "memory allocation failed for haddr buffer")
-
- /* Now receive the list of candidate entries */
- if(MPI_SUCCESS != (mpi_result = MPI_Bcast((void *)haddr_buf_ptr, (int)buf_size, MPI_BYTE, 0, mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Bcast failed", mpi_result)
- } /* end if */
-
- /* finally, pass the number of entries and the buffer pointer
- * back to the caller.
- */
- *num_entries_ptr = num_entries;
- *haddr_buf_ptr_ptr = haddr_buf_ptr;
-
-done:
- if(ret_value < 0)
- if(haddr_buf_ptr)
- haddr_buf_ptr = (haddr_t *)H5MM_xfree((void *)haddr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC_receive_haddr_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__receive_and_apply_clean_list()
- *
- * Purpose: Receive the list of cleaned entries from process 0,
- * and mark the specified entries as clean.
- *
- * This function must only be called by the process with
- * MPI_rank greater than 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 7/4/05
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__receive_and_apply_clean_list(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- haddr_t * haddr_buf_ptr = NULL;
- int num_entries = 0;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity check */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank != 0);
-
- /* Retrieve the clean list from process 0 */
- if(H5AC__receive_haddr_list(aux_ptr->mpi_comm, &num_entries, &haddr_buf_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "can't receive clean list")
-
- if(num_entries > 0)
- /* mark the indicated entries as clean */
- if(H5C_mark_entries_as_clean(f, dxpl_id, (int32_t)num_entries, haddr_buf_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't mark entries clean.")
-
- /* if it is defined, call the sync point done callback. Note
- * that this callback is defined purely for testing purposes,
- * and should be undefined under normal operating circumstances.
- */
- if(aux_ptr->sync_point_done)
- (aux_ptr->sync_point_done)(num_entries, haddr_buf_ptr);
-
-done:
- if(haddr_buf_ptr)
- haddr_buf_ptr = (haddr_t *)H5MM_xfree((void *)haddr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__receive_and_apply_clean_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- *
- * Function: H5AC__receive_candidate_list()
- *
- * Purpose: Receive the list of candidate entries from process 0,
- * and return it in a buffer pointed to by *haddr_buf_ptr_ptr.
- * Note that the caller must free this buffer if it is
- * returned.
- *
- * This function must only be called by the process with
- * MPI_rank greater than 0.
- *
- * Return SUCCEED on success, and FAIL on failure.
- *
- * Return: Non-negative on success/Negative on failure.
- *
- * Programmer: John Mainzer, 3/17/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__receive_candidate_list(const H5AC_t *cache_ptr, int *num_entries_ptr,
- haddr_t **haddr_buf_ptr_ptr)
-{
- H5AC_aux_t * aux_ptr;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->mpi_rank != 0);
- HDassert(aux_ptr-> metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert(num_entries_ptr != NULL);
- HDassert(*num_entries_ptr == 0);
- HDassert(haddr_buf_ptr_ptr != NULL);
- HDassert(*haddr_buf_ptr_ptr == NULL);
-
- /* Retrieve the candidate list from process 0 */
- if(H5AC__receive_haddr_list(aux_ptr->mpi_comm, num_entries_ptr, haddr_buf_ptr_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "can't receive clean list")
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__receive_candidate_list() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__rsp__dist_md_write__flush
- *
- * Purpose: Routine for handling the details of running a sync point
- * that is triggered by a flush -- which in turn must have been
- * triggered by either a flush API call or a file close --
- * when the distributed metadata write strategy is selected.
- *
- * Upon entry, each process generates it own candidate list,
- * being a sorted list of all dirty metadata entries currently
- * in the metadata cache. Note that this list must be idendical
- * across all processes, as all processes see the same stream
- * of dirty metadata coming in, and use the same lists of
- * candidate entries at each sync point. (At first glance, this
- * argument sounds circular, but think of it in the sense of
- * a recursive proof).
- *
- * If this this list is empty, we are done, and the function
- * returns
- *
- * Otherwise, after the sorted list dirty metadata entries is
- * constructed, each process uses the same algorithm to assign
- * each entry on the candidate list to exactly one process for
- * flushing.
- *
- * At this point, all processes participate in a barrier to
- * avoid messages from the past/future bugs.
- *
- * Each process then flushes the entries assigned to it, and
- * marks all other entries on the candidate list as clean.
- *
- * Finally, all processes participate in a second barrier to
- * avoid messages from the past/future bugs.
- *
- * At the end of this process, process 0 and only process 0
- * must tidy up its lists of dirtied and cleaned entries.
- * These lists are not used in the distributed metadata write
- * strategy, but they must be maintained should we shift
- * to a strategy that uses them.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * April 28, 2010
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__rsp__dist_md_write__flush(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- haddr_t * haddr_buf_ptr = NULL;
- int mpi_result;
- int num_entries = 0;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
-
- /* first construct the candidate list -- initially, this will be in the
- * form of a skip list. We will convert it later.
- */
- if(H5C_construct_candidate_list__clean_cache(cache_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't construct candidate list.")
-
- if(H5SL_count(aux_ptr->candidate_slist_ptr) > 0) {
- herr_t result;
-
- /* convert the candidate list into the format we
- * are used to receiving from process 0.
- */
- if(H5AC__copy_candidate_list_to_buffer(cache_ptr, &num_entries, &haddr_buf_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't construct candidate buffer.")
-
- /* initial sync point barrier */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- /* Enable writes during this operation */
- aux_ptr->write_permitted = TRUE;
-
- /* Apply the candidate list */
- result = H5C_apply_candidate_list(f, dxpl_id, cache_ptr, num_entries,
- haddr_buf_ptr, aux_ptr->mpi_rank, aux_ptr->mpi_size);
-
- /* Disable writes again */
- aux_ptr->write_permitted = FALSE;
-
- /* Check for error on the write operation */
- if(result < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't apply candidate list.")
-
- /* this code exists primarily for the test bed -- it allows us to
- * enforce posix semantics on the server that pretends to be a
- * file system in our parallel tests.
- */
- if(aux_ptr->write_done)
- (aux_ptr->write_done)();
-
- /* final sync point barrier */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- /* if this is process zero, tidy up the dirtied,
- * and flushed and still clean lists.
- */
- if(aux_ptr->mpi_rank == 0)
- if(H5AC__tidy_cache_0_lists(cache_ptr, num_entries, haddr_buf_ptr) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Can't tidy up process 0 lists.")
- } /* end if */
-
- /* if it is defined, call the sync point done callback. Note
- * that this callback is defined purely for testing purposes,
- * and should be undefined under normal operating circumstances.
- */
- if(aux_ptr->sync_point_done)
- (aux_ptr->sync_point_done)(num_entries, haddr_buf_ptr);
-
-done:
- if(haddr_buf_ptr)
- haddr_buf_ptr = (haddr_t *)H5MM_xfree((void *)haddr_buf_ptr);
-
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__rsp__dist_md_write__flush() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__rsp__dist_md_write__flush_to_min_clean
- *
- * Purpose: Routine for handling the details of running a sync point
- * triggered by the accumulation of dirty metadata (as
- * opposed to a flush call to the API) when the distributed
- * metadata write strategy is selected.
- *
- * After invocation and initial sanity checking this function
- * first checks to see if evictions are enabled -- if they
- * are not, the function does nothing and returns.
- *
- * Otherwise, process zero constructs a list of entries to
- * be flushed in order to bring the process zero cache back
- * within its min clean requirement. Note that this list
- * (the candidate list) may be empty.
- *
- * Then, all processes participate in a barrier.
- *
- * After the barrier, process 0 broadcasts the number of
- * entries in the candidate list prepared above, and all
- * other processes receive this number.
- *
- * If this number is zero, we are done, and the function
- * returns without further action.
- *
- * Otherwise, process 0 broadcasts the sorted list of
- * candidate entries, and all other processes receive it.
- *
- * Then, each process uses the same algorithm to assign
- * each entry on the candidate list to exactly one process
- * for flushing.
- *
- * Each process then flushes the entries assigned to it, and
- * marks all other entries on the candidate list as clean.
- *
- * Finally, all processes participate in a second barrier to
- * avoid messages from the past/future bugs.
- *
- * At the end of this process, process 0 and only process 0
- * must tidy up its lists of dirtied and cleaned entries.
- * These lists are not used in the distributed metadata write
- * strategy, but they must be maintained should we shift
- * to a strategy that uses them.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * April 28, 2010
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__rsp__dist_md_write__flush_to_min_clean(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- hbool_t evictions_enabled;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
-
- /* Query if evictions are allowed */
- if(H5C_get_evictions_enabled((const H5C_t *)cache_ptr, &evictions_enabled) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5C_get_evictions_enabled() failed.")
-
- if(evictions_enabled) {
- /* construct candidate list -- process 0 only */
- if(aux_ptr->mpi_rank == 0)
- if(H5AC__construct_candidate_list(cache_ptr, aux_ptr, H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't construct candidate list.")
-
- /* propagate and apply candidate list -- all processes */
- if(H5AC__propagate_and_apply_candidate_list(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't propagate and apply candidate list.")
- } /* evictions enabled */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__rsp__dist_md_write__flush_to_min_clean() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__rsp__p0_only__flush
- *
- * Purpose: Routine for handling the details of running a sync point
- * that is triggered a flush -- which in turn must have been
- * triggered by either a flush API call or a file close --
- * when the process 0 only metadata write strategy is selected.
- *
- * First, all processes participate in a barrier.
- *
- * Then process zero flushes all dirty entries, and broadcasts
- * they number of clean entries (if any) to all the other
- * caches.
- *
- * If this number is zero, we are done.
- *
- * Otherwise, process 0 broadcasts the list of cleaned
- * entries, and all other processes which are part of this
- * file group receive it, and mark the listed entries as
- * clean in their caches.
- *
- * Since all processes have the same set of dirty
- * entries at the beginning of the sync point, and all
- * entries that will be written are written before
- * process zero broadcasts the number of cleaned entries,
- * there is no need for a closing barrier.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * April 28, 2010
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__rsp__p0_only__flush(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- int mpi_result;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY);
-
- /* to prevent "messages from the future" we must
- * synchronize all processes before we start the flush.
- * Hence the following barrier.
- */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- /* Flush data to disk, from rank 0 process */
- if(aux_ptr->mpi_rank == 0) {
- herr_t result;
-
- /* Enable writes during this operation */
- aux_ptr->write_permitted = TRUE;
-
- /* Flush the cache */
- result = H5C_flush_cache(f, dxpl_id, H5AC__NO_FLAGS_SET);
-
- /* Disable writes again */
- aux_ptr->write_permitted = FALSE;
-
- /* Check for error on the write operation */
- if(result < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't flush.")
-
- /* this code exists primarily for the test bed -- it allows us to
- * enforce posix semantics on the server that pretends to be a
- * file system in our parallel tests.
- */
- if(aux_ptr->write_done)
- (aux_ptr->write_done)();
- } /* end if */
-
- /* Propagate cleaned entries to other ranks. */
- if(H5AC__propagate_flushed_and_still_clean_entries_list(f, H5AC_dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't propagate clean entries list.")
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__rsp__p0_only__flush() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__rsp__p0_only__flush_to_min_clean
- *
- * Purpose: Routine for handling the details of running a sync point
- * triggered by the accumulation of dirty metadata (as
- * opposed to a flush call to the API) when the process 0
- * only metadata write strategy is selected.
- *
- * After invocation and initial sanity checking this function
- * first checks to see if evictions are enabled -- if they
- * are not, the function does nothing and returns.
- *
- * Otherwise, all processes participate in a barrier.
- *
- * After the barrier, if this is process 0, the function
- * causes the cache to flush sufficient entries to get the
- * cache back within its minimum clean fraction, and broadcast
- * the number of entries which have been flushed since
- * the last sync point, and are still clean.
- *
- * If this number is zero, we are done.
- *
- * Otherwise, process 0 broadcasts the list of cleaned
- * entries, and all other processes which are part of this
- * file group receive it, and mark the listed entries as
- * clean in their caches.
- *
- * Since all processes have the same set of dirty
- * entries at the beginning of the sync point, and all
- * entries that will be written are written before
- * process zero broadcasts the number of cleaned entries,
- * there is no need for a closing barrier.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * April 28, 2010
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__rsp__p0_only__flush_to_min_clean(H5F_t *f, hid_t dxpl_id)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- hbool_t evictions_enabled;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY);
-
- /* Query if evictions are allowed */
- if(H5C_get_evictions_enabled((const H5C_t *)cache_ptr, &evictions_enabled) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5C_get_evictions_enabled() failed.")
-
- /* Flush if evictions are allowed -- following call
- * will cause process 0 to flush to min clean size,
- * and then propagate the newly clean entries to the
- * other processes.
- *
- * Otherwise, do nothing.
- */
- if(evictions_enabled) {
- int mpi_result;
-
- /* to prevent "messages from the future" we must synchronize all
- * processes before we start the flush. This synchronization may
- * already be done -- hence the do_barrier parameter.
- */
- if(MPI_SUCCESS != (mpi_result = MPI_Barrier(aux_ptr->mpi_comm)))
- HMPI_GOTO_ERROR(FAIL, "MPI_Barrier failed", mpi_result)
-
- if(0 == aux_ptr->mpi_rank) {
- herr_t result;
-
- /* here, process 0 flushes as many entries as necessary to
- * comply with the currently specified min clean size.
- * Note that it is quite possible that no entries will be
- * flushed.
- */
-
- /* Enable writes during this operation */
- aux_ptr->write_permitted = TRUE;
-
- /* Flush the cache */
- result = H5C_flush_to_min_clean(f, dxpl_id);
-
- /* Disable writes again */
- aux_ptr->write_permitted = FALSE;
-
- /* Check for error on the write operation */
- if(result < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "H5C_flush_to_min_clean() failed.")
-
- /* this call exists primarily for the test code -- it is used
- * to enforce POSIX semantics on the process used to simulate
- * reads and writes in t_cache.c.
- */
- if(aux_ptr->write_done)
- (aux_ptr->write_done)();
- } /* end if */
-
- if(H5AC__propagate_flushed_and_still_clean_entries_list(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't propagate clean entries list.")
- } /* end if */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__rsp__p0_only__flush_to_min_clean() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__run_sync_point
- *
- * Purpose: Top level routine for managing a sync point between all
- * meta data caches in the parallel case. Since all caches
- * see the same sequence of dirty metadata, we simply count
- * bytes of dirty metadata, and run a sync point whenever the
- * number of dirty bytes of metadata seen since the last
- * sync point exceeds a threshold that is common across all
- * processes. We also run sync points in response to
- * HDF5 API calls triggering either a flush or a file close.
- *
- * In earlier versions of PHDF5, only the metadata cache with
- * mpi rank 0 was allowed to write to file. All other
- * metadata caches on processes with rank greater than 0 were
- * required to retain dirty entries until they were notified
- * that the entry is was clean.
- *
- * This function was created to make it easier for us to
- * experiment with other options, as it is a single point
- * for the execution of sync points.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * March 11, 2010
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__run_sync_point(H5F_t *f, hid_t dxpl_id, int sync_point_op)
-{
- H5AC_t * cache_ptr;
- H5AC_aux_t * aux_ptr;
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f != NULL);
- cache_ptr = f->shared->cache;
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert((sync_point_op == H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN) ||
- (sync_point_op == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED));
-
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
-HDfprintf(stdout, "%d:H5AC_propagate...:%u: (u/uu/i/iu/r/ru) = %zu/%u/%zu/%u/%zu/%u\n",
- aux_ptr->mpi_rank,
- aux_ptr->dirty_bytes_propagations,
- aux_ptr->unprotect_dirty_bytes,
- aux_ptr->unprotect_dirty_bytes_updates,
- aux_ptr->insert_dirty_bytes,
- aux_ptr->insert_dirty_bytes_updates,
- aux_ptr->rename_dirty_bytes,
- aux_ptr->rename_dirty_bytes_updates);
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
-
- switch(aux_ptr->metadata_write_strategy) {
- case H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY:
- switch(sync_point_op) {
- case H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN:
- if(H5AC__rsp__p0_only__flush_to_min_clean(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5AC__rsp__p0_only__flush_to_min_clean() failed.")
- break;
-
- case H5AC_SYNC_POINT_OP__FLUSH_CACHE:
- if(H5AC__rsp__p0_only__flush(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5AC__rsp__p0_only__flush() failed.")
- break;
-
- default:
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "unknown flush op");
- break;
- } /* end switch */
- break;
-
- case H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED:
- switch(sync_point_op) {
- case H5AC_SYNC_POINT_OP__FLUSH_TO_MIN_CLEAN:
- if(H5AC__rsp__dist_md_write__flush_to_min_clean(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5AC__rsp__dist_md_write__flush_to_min_clean() failed.")
- break;
-
- case H5AC_SYNC_POINT_OP__FLUSH_CACHE:
- if(H5AC__rsp__dist_md_write__flush(f, dxpl_id) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTGET, FAIL, "H5AC__rsp__dist_md_write__flush() failed.")
- break;
-
- default:
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "unknown flush op");
- break;
- } /* end switch */
- break;
-
- default:
- HGOTO_ERROR(H5E_CACHE, H5E_SYSTEM, FAIL, "Unknown metadata write strategy.")
- break;
- } /* end switch */
-
- /* reset the dirty bytes count */
- aux_ptr->dirty_bytes = 0;
-
-#if H5AC_DEBUG_DIRTY_BYTES_CREATION
- aux_ptr->dirty_bytes_propagations += 1;
- aux_ptr->unprotect_dirty_bytes = 0;
- aux_ptr->unprotect_dirty_bytes_updates = 0;
- aux_ptr->insert_dirty_bytes = 0;
- aux_ptr->insert_dirty_bytes_updates = 0;
- aux_ptr->rename_dirty_bytes = 0;
- aux_ptr->rename_dirty_bytes_updates = 0;
-#endif /* H5AC_DEBUG_DIRTY_BYTES_CREATION */
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__run_sync_point() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__tidy_cache_0_lists()
- *
- * Purpose: In the distributed metadata write strategy, not all dirty
- * entries are written by process 0 -- thus we must tidy
- * up the dirtied, and flushed and still clean lists
- * maintained by process zero after each sync point.
- *
- * This procedure exists to tend to this issue.
- *
- * At this point, all entries that process 0 cleared should
- * have been removed from both the dirty and flushed and
- * still clean lists, and entries that process 0 has flushed
- * should have been removed from the dirtied list and added
- * to the flushed and still clean list.
- *
- * However, since the distributed metadata write strategy
- * doesn't make use of these lists, the objective is simply
- * to maintain these lists in consistent state that allows
- * them to be used should the metadata write strategy change
- * to one that uses these lists.
- *
- * Thus for our purposes, all we need to do is remove from
- * the dirtied and flushed and still clean lists all
- * references to entries that appear in the candidate list.
- *
- * Return: Success: non-negative
- *
- * Failure: negative
- *
- * Programmer: John Mainzer
- * 4/20/10
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__tidy_cache_0_lists(H5AC_t *cache_ptr, int num_candidates,
- haddr_t *candidates_list_ptr)
-{
- H5AC_aux_t * aux_ptr;
- int i;
-
- FUNC_ENTER_STATIC_NOERR
-
- /* Sanity checks */
- HDassert(cache_ptr != NULL);
- HDassert(cache_ptr->magic == H5C__H5C_T_MAGIC);
- aux_ptr = (H5AC_aux_t *)(cache_ptr->aux_ptr);
- HDassert(aux_ptr != NULL);
- HDassert(aux_ptr->magic == H5AC__H5AC_AUX_T_MAGIC);
- HDassert(aux_ptr->metadata_write_strategy == H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
- HDassert(aux_ptr->mpi_rank == 0);
- HDassert(num_candidates > 0);
- HDassert(candidates_list_ptr != NULL);
-
- /* clean up dirtied and flushed and still clean lists by removing
- * all entries on the candidate list. Cleared entries should
- * have been removed from both the dirty and cleaned lists at
- * this point, flushed entries should have been added to the
- * cleaned list. However, for this metadata write strategy,
- * we just want to remove all references to the candidate entries.
- */
- for(i = 0; i < num_candidates; i++) {
- H5AC_slist_entry_t * d_slist_entry_ptr;
- H5AC_slist_entry_t * c_slist_entry_ptr;
- haddr_t addr;
-
- addr = candidates_list_ptr[i];
-
- /* addr may be either on the dirtied list, or on the flushed
- * and still clean list. Remove it.
- */
- if(NULL != (d_slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->d_slist_ptr, (void *)&addr)))
- d_slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, d_slist_entry_ptr);
- if(NULL != (c_slist_entry_ptr = (H5AC_slist_entry_t *)H5SL_remove(aux_ptr->c_slist_ptr, (void *)&addr)))
- c_slist_entry_ptr = H5FL_FREE(H5AC_slist_entry_t, c_slist_entry_ptr);
- } /* end for */
-
- FUNC_LEAVE_NOAPI(SUCCEED)
-} /* H5AC__tidy_cache_0_lists() */
-#endif /* H5_HAVE_PARALLEL */
-
-
-/*-------------------------------------------------------------------------
- * Function: H5AC__flush_entries
- *
- * Purpose: Flush the metadata cache associated with the specified file,
- * only writing from rank 0, but propagating the cleaned entries
- * to all ranks.
- *
- * Return: Non-negative on success/Negative on failure if there was a
- * request to flush all items and something was protected.
- *
- * Programmer: Quincey Koziol
- * koziol@hdfgroup.org
- * Aug 22 2009
- *
- *-------------------------------------------------------------------------
- */
-#ifdef H5_HAVE_PARALLEL
-static herr_t
-H5AC__flush_entries(H5F_t *f, hid_t dxpl_id)
-{
- herr_t ret_value = SUCCEED; /* Return value */
-
- FUNC_ENTER_STATIC
-
- /* Sanity checks */
- HDassert(f);
- HDassert(f->shared->cache);
-
- /* Check if we have >1 ranks */
- if(f->shared->cache->aux_ptr)
- if(H5AC__run_sync_point(f, dxpl_id, H5AC_SYNC_POINT_OP__FLUSH_CACHE) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "Can't run sync point.")
-
-done:
- FUNC_LEAVE_NOAPI(ret_value)
-} /* H5AC__flush_entries() */
-#endif /* H5_HAVE_PARALLEL */
-
-
/*------------------------------------------------------------------------------
* Function: H5AC_ignore_tags()
*