diff options
Diffstat (limited to 'src/H5Dcontig.c')
| -rw-r--r-- | src/H5Dcontig.c | 31 |
1 files changed, 16 insertions, 15 deletions
diff --git a/src/H5Dcontig.c b/src/H5Dcontig.c index c2e9bfc..14c79eb 100644 --- a/src/H5Dcontig.c +++ b/src/H5Dcontig.c @@ -12,7 +12,7 @@ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ /* - * Programmer: Quincey Koziol <koziol@ncsa.uiuc.edu> + * Programmer: Quincey Koziol * Thursday, September 28, 2000 * * Purpose: @@ -40,6 +40,7 @@ #include "H5FLprivate.h" /* Free Lists */ #include "H5Iprivate.h" /* IDs */ #include "H5MFprivate.h" /* File memory management */ +#include "H5MMprivate.h" /* Memory management */ #include "H5FOprivate.h" /* File objects */ #include "H5Oprivate.h" /* Object headers */ #include "H5Pprivate.h" /* Property lists */ @@ -776,7 +777,7 @@ H5D__contig_readvv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "block read failed") /* Grab the data out of the buffer (must be first piece of data in buffer ) */ - HDmemcpy(buf, dset_contig->sieve_buf, len); + H5MM_memcpy(buf, dset_contig->sieve_buf, len); /* Reset sieve buffer dirty flag */ dset_contig->sieve_dirty = FALSE; @@ -796,7 +797,7 @@ H5D__contig_readvv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, unsigned char *base_sieve_buf = dset_contig->sieve_buf + (addr - sieve_start); /* Grab the data out of the buffer */ - HDmemcpy(buf, base_sieve_buf, len); + H5MM_memcpy(buf, base_sieve_buf, len); } /* end if */ /* Entire request is not within this data sieve buffer */ else { @@ -847,7 +848,7 @@ H5D__contig_readvv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, * the end of the data element, and don't read more than * the buffer size. */ - min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); + min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); H5_CHECKED_ASSIGN(dset_contig->sieve_size, size_t, min, hsize_t); /* Update local copies of sieve information */ @@ -860,7 +861,7 @@ H5D__contig_readvv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, HGOTO_ERROR(H5E_DATASET, H5E_READERROR, FAIL, "block read failed") /* Grab the data out of the buffer (must be first piece of data in buffer ) */ - HDmemcpy(buf, dset_contig->sieve_buf, len); + H5MM_memcpy(buf, dset_contig->sieve_buf, len); /* Reset sieve buffer dirty flag */ dset_contig->sieve_dirty = FALSE; @@ -1047,7 +1048,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, max_data = store_contig->dset_size - dst_off; /* Compute the size of the sieve buffer */ - min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); + min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); H5_CHECKED_ASSIGN(dset_contig->sieve_size, size_t, min, hsize_t); /* Check if there is any point in reading the data from the file */ @@ -1058,7 +1059,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, } /* end if */ /* Grab the data out of the buffer (must be first piece of data in buffer ) */ - HDmemcpy(dset_contig->sieve_buf, buf, len); + H5MM_memcpy(dset_contig->sieve_buf, buf, len); /* Set sieve buffer dirty flag */ dset_contig->sieve_dirty = TRUE; @@ -1078,7 +1079,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, unsigned char *base_sieve_buf = dset_contig->sieve_buf + (addr - sieve_start); /* Put the data into the sieve buffer */ - HDmemcpy(base_sieve_buf, buf, len); + H5MM_memcpy(base_sieve_buf, buf, len); /* Set sieve buffer dirty flag */ dset_contig->sieve_dirty = TRUE; @@ -1121,7 +1122,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, HDmemmove(dset_contig->sieve_buf + len, dset_contig->sieve_buf, dset_contig->sieve_size); /* Copy in new information (must be first in sieve buffer) */ - HDmemcpy(dset_contig->sieve_buf, buf, len); + H5MM_memcpy(dset_contig->sieve_buf, buf, len); /* Adjust sieve location */ dset_contig->sieve_loc = addr; @@ -1130,7 +1131,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, /* Append to existing sieve buffer */ else { /* Copy in new information */ - HDmemcpy(dset_contig->sieve_buf + sieve_size, buf, len); + H5MM_memcpy(dset_contig->sieve_buf + sieve_size, buf, len); } /* end else */ /* Adjust sieve size */ @@ -1168,7 +1169,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, * the end of the data element, and don't read more than * the buffer size. */ - min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); + min = MIN3(rel_eoa - dset_contig->sieve_loc, max_data, dset_contig->sieve_buf_size); H5_CHECKED_ASSIGN(dset_contig->sieve_size, size_t, min, hsize_t); /* Update local copies of sieve information */ @@ -1184,7 +1185,7 @@ H5D__contig_writevv_sieve_cb(hsize_t dst_off, hsize_t src_off, size_t len, } /* end if */ /* Grab the data out of the buffer (must be first piece of data in buffer ) */ - HDmemcpy(dset_contig->sieve_buf, buf, len); + H5MM_memcpy(dset_contig->sieve_buf, buf, len); /* Set sieve buffer dirty flag */ dset_contig->sieve_dirty = TRUE; @@ -1539,7 +1540,7 @@ H5D__contig_copy(H5F_t *f_src, const H5O_storage_contig_t *storage_src, if(try_sieve && (addr_src >= sieve_start) && ((addr_src + src_nbytes -1) < sieve_end)) { unsigned char *base_sieve_buf = shared_fo->cache.contig.sieve_buf + (addr_src - sieve_start); - HDmemcpy(buf, base_sieve_buf, src_nbytes); + H5MM_memcpy(buf, base_sieve_buf, src_nbytes); } else /* Read raw data from source file */ if(H5F_block_read(f_src, H5FD_MEM_DRAW, addr_src, src_nbytes, buf) < 0) @@ -1552,7 +1553,7 @@ H5D__contig_copy(H5F_t *f_src, const H5O_storage_contig_t *storage_src, HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "datatype conversion failed") /* Copy into another buffer, to reclaim memory later */ - HDmemcpy(reclaim_buf, buf, mem_nbytes); + H5MM_memcpy(reclaim_buf, buf, mem_nbytes); /* Set background buffer to all zeros */ HDmemset(bkg, 0, buf_size); @@ -1578,7 +1579,7 @@ H5D__contig_copy(H5F_t *f_src, const H5O_storage_contig_t *storage_src, HGOTO_ERROR(H5E_DATASET, H5E_CANTCOPY, FAIL, "unable to copy reference attribute") /* After fix ref, copy the new reference elements to the buffer to write out */ - HDmemcpy(buf, bkg, buf_size); + H5MM_memcpy(buf, bkg, buf_size); } /* end if */ else /* Reset value to zero */ |