diff options
Diffstat (limited to 'src/H5Distore.c')
| -rw-r--r-- | src/H5Distore.c | 151 |
1 files changed, 78 insertions, 73 deletions
diff --git a/src/H5Distore.c b/src/H5Distore.c index eefa690..ec233bf 100644 --- a/src/H5Distore.c +++ b/src/H5Distore.c @@ -108,23 +108,23 @@ typedef H5F_rdcc_ent_t *H5F_rdcc_ent_ptr_t; /* For free lists */ /* Private prototypes */ static size_t H5F_istore_sizeof_rkey(H5F_t *f, const void *_udata); -static herr_t H5F_istore_new_node(H5F_t *f, H5B_ins_t, void *_lt_key, +static herr_t H5F_istore_new_node(H5F_t *f, hid_t dxpl_id, H5B_ins_t, void *_lt_key, void *_udata, void *_rt_key, haddr_t *addr_p /*out*/); -static int H5F_istore_cmp2(H5F_t *f, void *_lt_key, void *_udata, +static int H5F_istore_cmp2(H5F_t *f, hid_t dxpl_id, void *_lt_key, void *_udata, void *_rt_key); -static int H5F_istore_cmp3(H5F_t *f, void *_lt_key, void *_udata, +static int H5F_istore_cmp3(H5F_t *f, hid_t dxpl_id, void *_lt_key, void *_udata, void *_rt_key); -static herr_t H5F_istore_found(H5F_t *f, haddr_t addr, const void *_lt_key, +static herr_t H5F_istore_found(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void *_lt_key, void *_udata, const void *_rt_key); -static H5B_ins_t H5F_istore_insert(H5F_t *f, haddr_t addr, void *_lt_key, +static H5B_ins_t H5F_istore_insert(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_lt_key, hbool_t *lt_key_changed, void *_md_key, void *_udata, void *_rt_key, hbool_t *rt_key_changed, haddr_t *new_node/*out*/); -static H5B_iterate_t H5F_istore_iter_allocated(H5F_t *f, void *left_key, haddr_t addr, +static H5B_iterate_t H5F_istore_iter_allocated(H5F_t *f, hid_t dxpl_id, void *left_key, haddr_t addr, void *right_key, void *_udata); -static H5B_iterate_t H5F_istore_iter_dump(H5F_t *f, void *left_key, haddr_t addr, +static H5B_iterate_t H5F_istore_iter_dump(H5F_t *f, hid_t dxpl_id, void *left_key, haddr_t addr, void *right_key, void *_udata); static herr_t H5F_istore_decode_key(H5F_t *f, H5B_t *bt, uint8_t *raw, void *_key); @@ -132,11 +132,11 @@ static herr_t H5F_istore_encode_key(H5F_t *f, H5B_t *bt, uint8_t *raw, void *_key); static herr_t H5F_istore_debug_key(FILE *stream, int indent, int fwidth, const void *key, const void *udata); -static haddr_t H5F_istore_get_addr(H5F_t *f, const H5O_layout_t *layout, +static haddr_t H5F_istore_get_addr(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, const hssize_t offset[]); -static H5B_iterate_t H5F_istore_prune_extent(H5F_t *f, void *_lt_key, haddr_t addr, +static H5B_iterate_t H5F_istore_prune_extent(H5F_t *f, hid_t dxpl_id, void *_lt_key, haddr_t addr, void *_rt_key, void *_udata); -static H5B_ins_t H5F_istore_remove( H5F_t *f, haddr_t addr, void *_lt_key, +static H5B_ins_t H5F_istore_remove( H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_lt_key, hbool_t *lt_key_changed, void *_udata, void *_rt_key, hbool_t *rt_key_changed); @@ -387,7 +387,7 @@ done: *------------------------------------------------------------------------- */ static int -H5F_istore_cmp2(H5F_t UNUSED *f, void *_lt_key, void *_udata, +H5F_istore_cmp2(H5F_t UNUSED *f, hid_t dxpl_id, void *_lt_key, void *_udata, void *_rt_key) { H5F_istore_key_t *lt_key = (H5F_istore_key_t *) _lt_key; @@ -440,7 +440,7 @@ done: *------------------------------------------------------------------------- */ static int -H5F_istore_cmp3(H5F_t UNUSED *f, void *_lt_key, void *_udata, +H5F_istore_cmp3(H5F_t UNUSED *f, hid_t dxpl_id, void *_lt_key, void *_udata, void *_rt_key) { H5F_istore_key_t *lt_key = (H5F_istore_key_t *) _lt_key; @@ -489,7 +489,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5F_istore_new_node(H5F_t *f, H5B_ins_t op, +H5F_istore_new_node(H5F_t *f, hid_t dxpl_id, H5B_ins_t op, void *_lt_key, void *_udata, void *_rt_key, haddr_t *addr_p/*out*/) { @@ -511,7 +511,8 @@ H5F_istore_new_node(H5F_t *f, H5B_ins_t op, /* Allocate new storage */ assert (udata->key.nbytes > 0); - if (HADDR_UNDEF==(*addr_p=H5MF_alloc(f, H5FD_MEM_DRAW, (hsize_t)udata->key.nbytes))) + H5_CHECK_OVERFLOW( udata->key.nbytes ,size_t, hsize_t); + if (HADDR_UNDEF==(*addr_p=H5MF_alloc(f, H5FD_MEM_DRAW, dxpl_id, (hsize_t)udata->key.nbytes))) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, FAIL, "couldn't allocate new file storage"); udata->addr = *addr_p; @@ -573,7 +574,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5F_istore_found(H5F_t UNUSED *f, haddr_t addr, const void *_lt_key, +H5F_istore_found(H5F_t UNUSED *f, hid_t dxpl_id, haddr_t addr, const void *_lt_key, void *_udata, const void UNUSED *_rt_key) { H5F_istore_ud1_t *udata = (H5F_istore_ud1_t *) _udata; @@ -641,7 +642,7 @@ done: *------------------------------------------------------------------------- */ static H5B_ins_t -H5F_istore_insert(H5F_t *f, haddr_t addr, void *_lt_key, +H5F_istore_insert(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_lt_key, hbool_t UNUSED *lt_key_changed, void *_md_key, void *_udata, void *_rt_key, hbool_t UNUSED *rt_key_changed, @@ -668,7 +669,7 @@ H5F_istore_insert(H5F_t *f, haddr_t addr, void *_lt_key, assert(rt_key_changed); assert(new_node_p); - cmp = H5F_istore_cmp3(f, lt_key, udata, rt_key); + cmp = H5F_istore_cmp3(f, dxpl_id, lt_key, udata, rt_key); assert(cmp <= 0); if (cmp < 0) { @@ -698,9 +699,11 @@ H5F_istore_insert(H5F_t *f, haddr_t addr, void *_lt_key, (hsize_t)lt_key->nbytes, (hsize_t)udata->key.nbytes))) HGOTO_ERROR (H5E_STORAGE, H5E_NOSPACE, H5B_INS_ERROR, "unable to reallocate chunk storage"); #else /* OLD_WAY */ - if (H5MF_xfree(f, H5FD_MEM_DRAW, addr,(hsize_t)lt_key->nbytes)<0) + H5_CHECK_OVERFLOW( lt_key->nbytes ,size_t, hsize_t); + if (H5MF_xfree(f, H5FD_MEM_DRAW, dxpl_id, addr, (hsize_t)lt_key->nbytes)<0) HGOTO_ERROR(H5E_STORAGE, H5E_CANTFREE, H5B_INS_ERROR, "unable to free chunk"); - if (HADDR_UNDEF==(*new_node_p=H5MF_alloc(f, H5FD_MEM_DRAW, (hsize_t)udata->key.nbytes))) + H5_CHECK_OVERFLOW( udata->key.nbytes ,size_t, hsize_t); + if (HADDR_UNDEF==(*new_node_p=H5MF_alloc(f, H5FD_MEM_DRAW, dxpl_id, (hsize_t)udata->key.nbytes))) HGOTO_ERROR(H5E_STORAGE, H5E_NOSPACE, H5B_INS_ERROR, "unable to reallocate chunk"); #endif /* OLD_WAY */ lt_key->nbytes = udata->key.nbytes; @@ -733,7 +736,8 @@ H5F_istore_insert(H5F_t *f, haddr_t addr, void *_lt_key, /* * Allocate storage for the new chunk */ - if (HADDR_UNDEF==(*new_node_p=H5MF_alloc(f, H5FD_MEM_DRAW, (hsize_t)udata->key.nbytes))) + H5_CHECK_OVERFLOW( udata->key.nbytes ,size_t, hsize_t); + if (HADDR_UNDEF==(*new_node_p=H5MF_alloc(f, H5FD_MEM_DRAW, dxpl_id, (hsize_t)udata->key.nbytes))) HGOTO_ERROR(H5E_STORAGE, H5E_NOSPACE, H5B_INS_ERROR, "file allocation failed"); udata->addr = *new_node_p; ret_value = H5B_INS_RIGHT; @@ -769,7 +773,7 @@ done: *------------------------------------------------------------------------- */ static H5B_iterate_t -H5F_istore_iter_allocated (H5F_t UNUSED *f, void *_lt_key, haddr_t UNUSED addr, +H5F_istore_iter_allocated (H5F_t UNUSED *f, hid_t dxpl_id, void *_lt_key, haddr_t UNUSED addr, void UNUSED *_rt_key, void *_udata) { H5F_istore_ud1_t *bt_udata = (H5F_istore_ud1_t *)_udata; @@ -805,7 +809,7 @@ H5F_istore_iter_allocated (H5F_t UNUSED *f, void *_lt_key, haddr_t UNUSED addr, *------------------------------------------------------------------------- */ static H5B_iterate_t -H5F_istore_iter_dump (H5F_t UNUSED *f, void *_lt_key, haddr_t UNUSED addr, +H5F_istore_iter_dump (H5F_t UNUSED *f, hid_t dxpl_id, void *_lt_key, haddr_t UNUSED addr, void UNUSED *_rt_key, void *_udata) { H5F_istore_ud1_t *bt_udata = (H5F_istore_ud1_t *)_udata; @@ -890,7 +894,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5F_istore_flush_entry(H5F_t *f, H5F_rdcc_ent_t *ent, hbool_t reset) +H5F_istore_flush_entry(H5F_t *f, hid_t dxpl_id, H5F_rdcc_ent_t *ent, hbool_t reset) { herr_t ret_value=SUCCEED; /*return value */ H5F_istore_ud1_t udata; /*pass through B-tree */ @@ -898,8 +902,6 @@ H5F_istore_flush_entry(H5F_t *f, H5F_rdcc_ent_t *ent, hbool_t reset) void *buf=NULL; /*temporary buffer */ size_t alloc; /*bytes allocated for BUF */ hbool_t point_of_no_return = FALSE; - H5Z_cb_t cb_struct={NULL,NULL}; - H5Z_EDC_t edc=H5Z_ENABLE_EDC; FUNC_ENTER_NOINIT(H5F_istore_flush_entry); @@ -921,6 +923,10 @@ H5F_istore_flush_entry(H5F_t *f, H5F_rdcc_ent_t *ent, hbool_t reset) /* Should the chunk be filtered before writing it to disk? */ if (ent->pline && ent->pline->nfilters) { + H5P_genplist_t *plist; /* Data xfer property list */ + H5Z_cb_t cb_struct; + H5Z_EDC_t edc; + if (!reset) { /* * Copy the chunk to a new buffer before running it through @@ -947,6 +953,12 @@ H5F_istore_flush_entry(H5F_t *f, H5F_rdcc_ent_t *ent, hbool_t reset) /* Don't know whether we should involve transfer property list. So * just pass in H5Z_ENABLE_EDC and default callback setting for data * read. */ + if (NULL == (plist = H5P_object_verify(dxpl_id,H5P_DATASET_XFER))) + HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a dataset transfer property list"); + if(H5P_get(plist,H5D_XFER_EDC_NAME,&edc)<0) + HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, NULL, "can't get edc information"); + if(H5P_get(plist,H5D_XFER_FILTER_CB_NAME,&cb_struct)<0) + HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, NULL, "can't get filter callback struct"); if (H5Z_pipeline(f, ent->pline, 0, &(udata.key.filter_mask), edc, cb_struct, &(udata.key.nbytes), &alloc, &buf)<0) { HGOTO_ERROR(H5E_PLINE, H5E_WRITEERROR, FAIL, @@ -958,9 +970,9 @@ H5F_istore_flush_entry(H5F_t *f, H5F_rdcc_ent_t *ent, hbool_t reset) * Create the chunk it if it doesn't exist, or reallocate the chunk if * its size changed. Then write the data into the file. */ - if (H5B_insert(f, H5B_ISTORE, ent->layout->addr, ent->split_ratios, &udata)<0) + if (H5B_insert(f, dxpl_id, H5B_ISTORE, ent->layout->addr, ent->split_ratios, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to allocate chunk"); - if (H5F_block_write(f, H5FD_MEM_DRAW, udata.addr, udata.key.nbytes, H5P_DATASET_XFER_DEFAULT, buf)<0) + if (H5F_block_write(f, H5FD_MEM_DRAW, udata.addr, udata.key.nbytes, dxpl_id, buf)<0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to write raw data to file"); /* Mark cache entry as clean */ @@ -1018,7 +1030,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5F_istore_preempt(H5F_t *f, H5F_rdcc_ent_t * ent, hbool_t flush) +H5F_istore_preempt(H5F_t *f, hid_t dxpl_id, H5F_rdcc_ent_t * ent, hbool_t flush) { H5F_rdcc_t *rdcc = &(f->shared->rdcc); herr_t ret_value=SUCCEED; /* Return value */ @@ -1032,7 +1044,7 @@ H5F_istore_preempt(H5F_t *f, H5F_rdcc_ent_t * ent, hbool_t flush) if(flush) { /* Flush */ - if(H5F_istore_flush_entry(f, ent, TRUE) < 0) + if(H5F_istore_flush_entry(f, dxpl_id, ent, TRUE) < 0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "cannot flush indexed storage buffer"); } else { @@ -1086,7 +1098,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_flush (H5F_t *f, hbool_t preempt) +H5F_istore_flush (H5F_t *f, hid_t dxpl_id, hbool_t preempt) { H5F_rdcc_t *rdcc = &(f->shared->rdcc); int nerrors=0; @@ -1098,10 +1110,10 @@ H5F_istore_flush (H5F_t *f, hbool_t preempt) for (ent=rdcc->head; ent; ent=next) { next = ent->next; if (preempt) { - if (H5F_istore_preempt(f, ent, TRUE )<0) + if (H5F_istore_preempt(f, dxpl_id, ent, TRUE )<0) nerrors++; } else { - if (H5F_istore_flush_entry(f, ent, FALSE)<0) + if (H5F_istore_flush_entry(f, dxpl_id, ent, FALSE)<0) nerrors++; } } @@ -1132,7 +1144,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_dest (H5F_t *f) +H5F_istore_dest (H5F_t *f, hid_t dxpl_id) { H5F_rdcc_t *rdcc = &(f->shared->rdcc); int nerrors=0; @@ -1147,7 +1159,7 @@ H5F_istore_dest (H5F_t *f) HDfflush(stderr); #endif next = ent->next; - if (H5F_istore_preempt(f, ent, TRUE )<0) + if (H5F_istore_preempt(f, dxpl_id, ent, TRUE )<0) nerrors++; } if (nerrors) @@ -1180,7 +1192,7 @@ done: *------------------------------------------------------------------------- */ static herr_t -H5F_istore_prune (H5F_t *f, size_t size) +H5F_istore_prune (H5F_t *f, hid_t dxpl_id, size_t size) { int i, j, nerrors=0; H5F_rdcc_t *rdcc = &(f->shared->rdcc); @@ -1259,7 +1271,7 @@ H5F_istore_prune (H5F_t *f, size_t size) if (n[j]==cur) n[j] = cur->next; } - if (H5F_istore_preempt(f, cur, TRUE)<0) + if (H5F_istore_preempt(f, dxpl_id, cur, TRUE)<0) nerrors++; } } @@ -1331,7 +1343,7 @@ H5F_istore_lock(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, herr_t status; /*func return status */ void *chunk=NULL; /*the file chunk */ void *ret_value; /*return value */ - H5P_genplist_t *plist=NULL; /* Property list */ + H5P_genplist_t *plist; /* Property list */ H5Z_EDC_t edc; H5Z_cb_t cb_struct; @@ -1399,7 +1411,7 @@ H5F_istore_lock(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, H5_ASSIGN_OVERFLOW(chunk_size,tempchunk_size,hsize_t,size_t); udata.mesg = *layout; udata.addr = HADDR_UNDEF; - status = H5B_find (f, H5B_ISTORE, layout->addr, &udata); + status = H5B_find (f, dxpl_id, H5B_ISTORE, layout->addr, &udata); H5E_clear (); if (status>=0 && H5F_addr_defined(udata.addr)) { @@ -1413,7 +1425,7 @@ H5F_istore_lock(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, chunk_alloc = udata.key.nbytes; if (NULL==(chunk = H5MM_malloc (chunk_alloc))) HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for raw data chunk"); - if (H5F_block_read(f, H5FD_MEM_DRAW, udata.addr, udata.key.nbytes, H5P_DATASET_XFER_DEFAULT, chunk)<0) + if (H5F_block_read(f, H5FD_MEM_DRAW, udata.addr, udata.key.nbytes, dxpl_id, chunk)<0) HGOTO_ERROR (H5E_IO, H5E_READERROR, NULL, "unable to read raw data chunk"); if(H5P_get(plist,H5D_XFER_EDC_NAME,&edc)<0) HGOTO_ERROR(H5E_DATASET, H5E_CANTGET, NULL, "can't get edc information"); @@ -1459,11 +1471,10 @@ H5F_istore_lock(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, HDputc('#', stderr); HDfflush(stderr); #endif - if (H5F_istore_preempt(f, ent, TRUE)<0) + if (H5F_istore_preempt(f, dxpl_id, ent, TRUE)<0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, NULL, "unable to preempt chunk from cache"); } - - if (H5F_istore_prune(f, chunk_size)<0) + if (H5F_istore_prune(f, dxpl_id, chunk_size)<0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, NULL, "unable to preempt chunk(s) from cache"); /* Create a new entry */ @@ -1629,7 +1640,7 @@ H5F_istore_unlock(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, assert(plist!=NULL); H5P_get(plist,H5D_XFER_BTREE_SPLIT_RATIO_NAME,&(x.split_ratios)); - H5F_istore_flush_entry (f, &x, TRUE); + H5F_istore_flush_entry (f, dxpl_id, &x, TRUE); } else { if(chunk) H5MM_xfree (chunk); @@ -1763,7 +1774,7 @@ H5F_istore_read(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, } /* Get the address of this chunk on disk */ - chunk_addr=H5F_istore_get_addr(f, layout, chunk_offset); + chunk_addr=H5F_istore_get_addr(f, dxpl_id, layout, chunk_offset); /* * If the chunk is too large to load into the cache and it has no @@ -1800,8 +1811,7 @@ H5F_istore_read(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, for (u=l.ndims; u-- > 0; /*void*/) l.dim[u] = layout->dim[u]; l.addr = chunk_addr; - if (H5F_arr_read(f, H5P_DATASET_XFER_DEFAULT, &l, dc_plist, - sub_size, size_m, sub_offset_m, offset_wrt_chunk, buf)<0) + if (H5F_arr_read(f, dxpl_id, &l, dc_plist, sub_size, size_m, sub_offset_m, offset_wrt_chunk, buf)<0) HGOTO_ERROR (H5E_IO, H5E_READERROR, FAIL, "unable to read raw data from file"); } /* end if */ else { @@ -1945,7 +1955,7 @@ H5F_istore_write(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, } /* Get the address of this chunk on disk */ - chunk_addr=H5F_istore_get_addr(f, layout, chunk_offset); + chunk_addr=H5F_istore_get_addr(f, dxpl_id, layout, chunk_offset); /* * If the chunk is too large to load into the cache and it has no @@ -1982,8 +1992,7 @@ H5F_istore_write(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, for (u=l.ndims; u-- > 0; /*void*/) l.dim[u] = layout->dim[u]; l.addr = chunk_addr; - if (H5F_arr_write(f, H5P_DATASET_XFER_DEFAULT, &l, dc_plist, - sub_size, size_m, sub_offset_m, offset_wrt_chunk, buf)<0) + if (H5F_arr_write(f, dxpl_id, &l, dc_plist, sub_size, size_m, sub_offset_m, offset_wrt_chunk, buf)<0) HGOTO_ERROR (H5E_IO, H5E_WRITEERROR, FAIL, "unable to write raw data to file"); } /* end if */ else { @@ -2037,7 +2046,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_create(H5F_t *f, H5O_layout_t *layout /*out */ ) +H5F_istore_create(H5F_t *f, hid_t dxpl_id, H5O_layout_t *layout /*out */ ) { H5F_istore_ud1_t udata; #ifndef NDEBUG @@ -2057,7 +2066,7 @@ H5F_istore_create(H5F_t *f, H5O_layout_t *layout /*out */ ) #endif udata.mesg.ndims = layout->ndims; - if (H5B_create(f, H5B_ISTORE, &udata, &(layout->addr)/*out*/) < 0) + if (H5B_create(f, dxpl_id, H5B_ISTORE, &udata, &(layout->addr)/*out*/) < 0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, FAIL, "can't create B-tree"); done: @@ -2085,7 +2094,7 @@ done: *------------------------------------------------------------------------- */ hsize_t -H5F_istore_allocated(H5F_t *f, unsigned ndims, haddr_t addr) +H5F_istore_allocated(H5F_t *f, hid_t dxpl_id, unsigned ndims, haddr_t addr) { H5F_istore_ud1_t udata; hsize_t ret_value; /* Return value */ @@ -2094,7 +2103,7 @@ H5F_istore_allocated(H5F_t *f, unsigned ndims, haddr_t addr) HDmemset(&udata, 0, sizeof udata); udata.mesg.ndims = ndims; - if (H5B_iterate(f, H5B_ISTORE, H5F_istore_iter_allocated, addr, &udata)<0) + if (H5B_iterate(f, dxpl_id, H5B_ISTORE, H5F_istore_iter_allocated, addr, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to iterate over chunk B-tree"); /* Set return value */ @@ -2124,7 +2133,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_dump_btree(H5F_t *f, FILE *stream, unsigned ndims, haddr_t addr) +H5F_istore_dump_btree(H5F_t *f, hid_t dxpl_id, FILE *stream, unsigned ndims, haddr_t addr) { H5F_istore_ud1_t udata; herr_t ret_value=SUCCEED; /* Return value */ @@ -2136,7 +2145,7 @@ H5F_istore_dump_btree(H5F_t *f, FILE *stream, unsigned ndims, haddr_t addr) udata.stream = stream; if(stream) HDfprintf(stream, " Address: %a\n",addr); - if(H5B_iterate(f, H5B_ISTORE, H5F_istore_iter_dump, addr, &udata)<0) + if(H5B_iterate(f, dxpl_id, H5B_ISTORE, H5F_istore_iter_dump, addr, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to iterate over chunk B-tree"); done: @@ -2225,7 +2234,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_debug(H5F_t *f, haddr_t addr, FILE * stream, int indent, +H5F_istore_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE * stream, int indent, int fwidth, int ndims) { H5F_istore_ud1_t udata; @@ -2236,7 +2245,7 @@ H5F_istore_debug(H5F_t *f, haddr_t addr, FILE * stream, int indent, HDmemset (&udata, 0, sizeof udata); udata.mesg.ndims = ndims; - H5B_debug (f, addr, stream, indent, fwidth, H5B_ISTORE, &udata); + H5B_debug (f, dxpl_id, addr, stream, indent, fwidth, H5B_ISTORE, &udata); done: FUNC_LEAVE_NOAPI(ret_value); @@ -2262,7 +2271,7 @@ done: *------------------------------------------------------------------------- */ static haddr_t -H5F_istore_get_addr(H5F_t *f, const H5O_layout_t *layout, +H5F_istore_get_addr(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, const hssize_t offset[]) { H5F_istore_ud1_t udata; /* Information about a chunk */ @@ -2282,7 +2291,7 @@ H5F_istore_get_addr(H5F_t *f, const H5O_layout_t *layout, udata.addr = HADDR_UNDEF; /* Go get the chunk information */ - if (H5B_find (f, H5B_ISTORE, layout->addr, &udata)<0) { + if (H5B_find (f, dxpl_id, H5B_ISTORE, layout->addr, &udata)<0) { H5E_clear(); HGOTO_ERROR(H5E_BTREE,H5E_NOTFOUND,HADDR_UNDEF,"Can't locate chunk info"); } /* end if */ @@ -2478,7 +2487,7 @@ H5F_istore_allocate(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, while (carry==0) { /* Check if the chunk exists yet on disk */ chunk_exists=1; - if(H5F_istore_get_addr(f,layout,chunk_offset)==HADDR_UNDEF) { + if(H5F_istore_get_addr(f,dxpl_id,layout,chunk_offset)==HADDR_UNDEF) { H5F_rdcc_t *rdcc = &(f->shared->rdcc); /*raw data chunk cache */ H5F_rdcc_ent_t *ent = NULL; /*cache entry */ @@ -2512,7 +2521,7 @@ H5F_istore_allocate(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, udata.key.offset[u] = chunk_offset[u]; /* Allocate the chunk with all processes */ - if (H5B_insert(f, H5B_ISTORE, layout->addr, split_ratios, &udata)<0) + if (H5B_insert(f, dxpl_id, H5B_ISTORE, layout->addr, split_ratios, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to allocate chunk"); /* Check if fill values should be written to blocks */ @@ -2673,7 +2682,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_prune_by_extent(H5F_t *f, const H5O_layout_t *layout, const H5S_t * space) +H5F_istore_prune_by_extent(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, const H5S_t * space) { H5F_rdcc_t *rdcc = &(f->shared->rdcc); /*raw data chunk cache */ H5F_rdcc_ent_t *ent = NULL, *next = NULL; /*cache entry */ @@ -2726,7 +2735,7 @@ H5F_istore_prune_by_extent(H5F_t *f, const H5O_layout_t *layout, const H5S_t * s #endif /* Preempt the entry from the cache, but do not flush it to disk */ - if(H5F_istore_preempt(f, ent, FALSE) < 0) + if(H5F_istore_preempt(f, dxpl_id, ent, FALSE) < 0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to preempt chunk"); } } @@ -2744,7 +2753,7 @@ H5F_istore_prune_by_extent(H5F_t *f, const H5O_layout_t *layout, const H5S_t * s udata.mesg.dim[u] = layout->dim[u]; udata.dims = curr_dims; - if(H5B_iterate(f, H5B_ISTORE, H5F_istore_prune_extent, layout->addr, &udata) < 0) + if(H5B_iterate(f, dxpl_id, H5B_ISTORE, H5F_istore_prune_extent, layout->addr, &udata) < 0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to iterate over B-tree"); done: @@ -2770,7 +2779,7 @@ done: *------------------------------------------------------------------------- */ static H5B_iterate_t -H5F_istore_prune_extent(H5F_t *f, void *_lt_key, haddr_t UNUSED addr, +H5F_istore_prune_extent(H5F_t *f, hid_t dxpl_id, void *_lt_key, haddr_t UNUSED addr, void UNUSED *_rt_key, void *_udata) { H5F_istore_ud1_t *bt_udata = (H5F_istore_ud1_t *)_udata; @@ -2802,7 +2811,7 @@ H5F_istore_prune_extent(H5F_t *f, void *_lt_key, haddr_t UNUSED addr, udata.mesg = bt_udata->mesg; /* Remove */ - if(H5B_remove(f, H5B_ISTORE, bt_udata->mesg.addr, &udata) < 0) + if(H5B_remove(f, dxpl_id, H5B_ISTORE, bt_udata->mesg.addr, &udata) < 0) HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, H5B_ITER_ERROR, "unable to remove entry"); break; } /* end if */ @@ -2831,7 +2840,7 @@ done: *------------------------------------------------------------------------- */ static H5B_ins_t -H5F_istore_remove(H5F_t *f, haddr_t addr, void *_lt_key /*in,out */ , +H5F_istore_remove(H5F_t *f, hid_t dxpl_id, haddr_t addr, void *_lt_key /*in,out */ , hbool_t *lt_key_changed /*out */ , void UNUSED * _udata /*in,out */ , void UNUSED * _rt_key /*in,out */ , @@ -2842,7 +2851,7 @@ H5F_istore_remove(H5F_t *f, haddr_t addr, void *_lt_key /*in,out */ , FUNC_ENTER_NOAPI(H5F_istore_remove,H5B_INS_ERROR); - H5FD_free(f->shared->lf, H5FD_MEM_DRAW, addr, (hsize_t)lt_key->nbytes); + H5FD_free(f->shared->lf, H5FD_MEM_DRAW, dxpl_id, addr, (hsize_t)lt_key->nbytes); *lt_key_changed = FALSE; *rt_key_changed = FALSE; @@ -2876,10 +2885,9 @@ done: *------------------------------------------------------------------------- */ herr_t -H5F_istore_initialize_by_extent(H5F_t *f, const H5O_layout_t *layout, +H5F_istore_initialize_by_extent(H5F_t *f, hid_t dxpl_id, const H5O_layout_t *layout, H5P_genplist_t *dc_plist, const H5S_t * space) { - hid_t dxpl_id; /*dataset transfer property list */ uint8_t *chunk = NULL; /*the file chunk */ unsigned idx_hint = 0; /*input value for H5F_istore_lock */ hssize_t chunk_offset[H5O_LAYOUT_NDIMS]; /*logical location of the chunks */ @@ -2930,9 +2938,6 @@ H5F_istore_initialize_by_extent(H5F_t *f, const H5O_layout_t *layout, size[i] = curr_dims[i]; size[i] = layout->dim[i]; - /* Default dataset transfer property list */ - dxpl_id = H5P_DATASET_XFER_DEFAULT; - /* Create a data space for a chunk & set the extent */ if(NULL == (space_chunk = H5S_create(H5S_SIMPLE))) HGOTO_ERROR(H5E_DATASPACE, H5E_CANTCREATE, FAIL, "can't create simple dataspace"); 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