diff options
Diffstat (limited to 'src/H5Distore.c')
-rw-r--r-- | src/H5Distore.c | 50 |
1 files changed, 25 insertions, 25 deletions
diff --git a/src/H5Distore.c b/src/H5Distore.c index b0d60d6..54fd2a1 100644 --- a/src/H5Distore.c +++ b/src/H5Distore.c @@ -1069,9 +1069,9 @@ H5D_istore_flush_entry(const H5D_io_info_t *io_info, H5D_rdcc_ent_t *ent, hbool_ * Create the chunk it if it doesn't exist, or reallocate the chunk if * its size changed. Then write the data into the file. */ - if (H5B_insert(io_info->dset->ent.file, io_info->dxpl_id, H5B_ISTORE, io_info->dset->shared->layout.u.chunk.addr, &udata)<0) + if(H5B_insert(io_info->dset->oloc.file, io_info->dxpl_id, H5B_ISTORE, io_info->dset->shared->layout.u.chunk.addr, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to allocate chunk") - if (H5F_block_write(io_info->dset->ent.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, io_info->dxpl_id, buf)<0) + if(H5F_block_write(io_info->dset->oloc.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, io_info->dxpl_id, buf) < 0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to write raw data to file") /* Mark cache entry as clean */ @@ -1416,7 +1416,7 @@ H5D_istore_prune (const H5D_io_info_t *io_info, size_t size) * begins. The pointers participating in the list traversal are each * given a chance at preemption before any of the pointers are advanced. */ - w[0] = (int)(rdcc->nused * H5F_RDCC_W0(io_info->dset->ent.file)); + w[0] = (int)(rdcc->nused * H5F_RDCC_W0(io_info->dset->oloc.file)); p[0] = rdcc->head; p[1] = NULL; @@ -1613,16 +1613,16 @@ H5D_istore_lock(const H5D_io_info_t *io_info, /* Chunk size on disk isn't [likely] the same size as the final chunk * size in memory, so allocate memory big enough. */ chunk_alloc = udata->common.key.nbytes; - if (NULL==(chunk = H5D_istore_chunk_alloc (chunk_alloc,pline))) - HGOTO_ERROR (H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for raw data chunk") - if (H5F_block_read(dset->ent.file, H5FD_MEM_DRAW, chunk_addr, udata->common.key.nbytes, io_info->dxpl_id, chunk)<0) - HGOTO_ERROR (H5E_IO, H5E_READERROR, NULL, "unable to read raw data chunk") - - if (pline->nused) - if (H5Z_pipeline(pline, H5Z_FLAG_REVERSE, &(udata->common.key.filter_mask), io_info->dxpl_cache->err_detect, - io_info->dxpl_cache->filter_cb, &(udata->common.key.nbytes), &chunk_alloc, &chunk)<0) { + if(NULL == (chunk = H5D_istore_chunk_alloc (chunk_alloc, pline))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed for raw data chunk") + if(H5F_block_read(dset->oloc.file, H5FD_MEM_DRAW, chunk_addr, udata->common.key.nbytes, io_info->dxpl_id, chunk) < 0) + HGOTO_ERROR(H5E_IO, H5E_READERROR, NULL, "unable to read raw data chunk") + + if(pline->nused) { + if(H5Z_pipeline(pline, H5Z_FLAG_REVERSE, &(udata->common.key.filter_mask), io_info->dxpl_cache->err_detect, + io_info->dxpl_cache->filter_cb, &(udata->common.key.nbytes), &chunk_alloc, &chunk) < 0) HGOTO_ERROR(H5E_PLINE, H5E_READERROR, NULL, "data pipeline read failed") - } + } /* end if */ #ifdef H5D_ISTORE_DEBUG rdcc->nmisses++; #endif /* H5D_ISTORE_DEBUG */ @@ -1923,7 +1923,7 @@ HDfprintf(stderr,"%s: buf=%p\n",FUNC,buf); * read-through of only the elements requested. */ if (dset->shared->dcpl_cache.pline.nused==0 && ((dset->shared->layout.u.chunk.size>dset->shared->cache.chunk.nbytes && chunk_addr!=HADDR_UNDEF) - || (IS_H5FD_MPI(dset->ent.file) && (H5F_ACC_RDWR & H5F_get_intent(dset->ent.file))))) { + || (IS_H5FD_MPI(dset->oloc.file) && (H5F_ACC_RDWR & H5F_get_intent(dset->oloc.file))))) { H5D_io_info_t chk_io_info; /* Temporary I/O info object */ H5D_storage_t chk_store; /* Chunk storage information */ @@ -1960,7 +1960,7 @@ HDfprintf(stderr,"%s: buf=%p\n",FUNC,buf); /* Check if the chunk is in the cache (but hasn't been written to disk yet) */ if (rdcc->nslots>0) { - unsigned idx=H5D_HASH(dset->shared,io_info->store->chunk.index); /* Cache entry index */ + unsigned idx=H5D_HASH(dset->shared, io_info->store->chunk.index); /* Cache entry index */ H5D_rdcc_ent_t *ent = rdcc->slot[idx]; /* Cache entry */ /* Potential match... */ @@ -2114,7 +2114,7 @@ HDfprintf(stderr,"%s: mem_offset_arr[%Zu]=%Hu\n",FUNC,*mem_curr_seq,mem_offset_a */ #ifdef H5_HAVE_PARALLEL /* Additional sanity checks when operating in parallel */ - if(IS_H5FD_MPI(dset->ent.file)) { + if(IS_H5FD_MPI(dset->oloc.file)) { if (chunk_addr==HADDR_UNDEF) HGOTO_ERROR (H5E_IO, H5E_WRITEERROR, FAIL, "unable to locate raw data chunk") if (dset->shared->dcpl_cache.pline.nused>0) @@ -2123,7 +2123,7 @@ HDfprintf(stderr,"%s: mem_offset_arr[%Zu]=%Hu\n",FUNC,*mem_curr_seq,mem_offset_a #endif /* H5_HAVE_PARALLEL */ if (dset->shared->dcpl_cache.pline.nused==0 && ((dset->shared->layout.u.chunk.size>dset->shared->cache.chunk.nbytes && chunk_addr!=HADDR_UNDEF) - || (IS_H5FD_MPI(dset->ent.file) && (H5F_ACC_RDWR & H5F_get_intent(dset->ent.file))))) { + || (IS_H5FD_MPI(dset->oloc.file) && (H5F_ACC_RDWR & H5F_get_intent(dset->oloc.file))))) { H5D_io_info_t chk_io_info; /* Temporary I/O info object */ H5D_storage_t chk_store; /* Chunk storage information */ @@ -2291,7 +2291,7 @@ H5D_istore_allocated(H5D_t *dset, hid_t dxpl_id) HDmemset(&udata, 0, sizeof udata); udata.common.mesg = &dset->shared->layout; - if (H5B_iterate(dset->ent.file, dxpl_id, H5B_ISTORE, H5D_istore_iter_allocated, dset->shared->layout.u.chunk.addr, &udata)<0) + if(H5B_iterate(dset->oloc.file, dxpl_id, H5B_ISTORE, H5D_istore_iter_allocated, dset->shared->layout.u.chunk.addr, &udata) < 0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to iterate over chunk B-tree") /* Set return value */ @@ -2341,7 +2341,7 @@ H5D_istore_get_addr(const H5D_io_info_t *io_info, H5D_istore_ud1_t *_udata) udata->addr = HADDR_UNDEF; /* Go get the chunk information */ - if (H5B_find (io_info->dset->ent.file, io_info->dxpl_id, H5B_ISTORE, io_info->dset->shared->layout.u.chunk.addr, udata)<0) { + if (H5B_find (io_info->dset->oloc.file, io_info->dxpl_id, H5B_ISTORE, io_info->dset->shared->layout.u.chunk.addr, udata)<0) { /* Note: don't push error on stack, leave that to next higher level, * since many times the B-tree is searched in order to determine * if a chunk exists in the B-tree or not. -QAK @@ -2516,13 +2516,13 @@ H5D_istore_allocate(H5D_t *dset, hid_t dxpl_id, hbool_t full_overwrite) #ifdef H5_HAVE_PARALLEL /* Retrieve MPI parameters */ - if(IS_H5FD_MPI(dset->ent.file)) { + if(IS_H5FD_MPI(dset->oloc.file)) { /* Get the MPI communicator */ - if (MPI_COMM_NULL == (mpi_comm=H5F_mpi_get_comm(dset->ent.file))) + if(MPI_COMM_NULL == (mpi_comm = H5F_mpi_get_comm(dset->oloc.file))) HGOTO_ERROR(H5E_INTERNAL, H5E_MPI, FAIL, "Can't retrieve MPI communicator") /* Get the MPI rank */ - if ((mpi_rank=H5F_mpi_get_rank(dset->ent.file))<0) + if((mpi_rank = H5F_mpi_get_rank(dset->oloc.file))<0) HGOTO_ERROR(H5E_INTERNAL, H5E_MPI, FAIL, "Can't retrieve MPI rank") /* Set the MPI-capable file driver flag */ @@ -2627,7 +2627,7 @@ H5D_istore_allocate(H5D_t *dset, hid_t dxpl_id, hbool_t full_overwrite) udata.common.key.offset[u] = chunk_offset[u]; /* Allocate the chunk with all processes */ - if (H5B_insert(dset->ent.file, dxpl_id, H5B_ISTORE, dset->shared->layout.u.chunk.addr, &udata)<0) + if(H5B_insert(dset->oloc.file, dxpl_id, H5B_ISTORE, dset->shared->layout.u.chunk.addr, &udata)<0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to allocate chunk") /* Check if fill values should be written to blocks */ @@ -2638,7 +2638,7 @@ H5D_istore_allocate(H5D_t *dset, hid_t dxpl_id, hbool_t full_overwrite) /* Write the chunks out from only one process */ /* !! Use the internal "independent" DXPL!! -QAK */ if(H5_PAR_META_WRITE==mpi_rank) { - if (H5F_block_write(dset->ent.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, H5AC_ind_dxpl_id, chunk)<0) + if(H5F_block_write(dset->oloc.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, H5AC_ind_dxpl_id, chunk) < 0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to write raw data to file") } /* end if */ @@ -2647,7 +2647,7 @@ H5D_istore_allocate(H5D_t *dset, hid_t dxpl_id, hbool_t full_overwrite) } /* end if */ else { #endif /* H5_HAVE_PARALLEL */ - if (H5F_block_write(dset->ent.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, dxpl_id, chunk)<0) + if(H5F_block_write(dset->oloc.file, H5FD_MEM_DRAW, udata.addr, udata.common.key.nbytes, dxpl_id, chunk) < 0) HGOTO_ERROR(H5E_IO, H5E_WRITEERROR, FAIL, "unable to write raw data to file") #ifdef H5_HAVE_PARALLEL } /* end else */ @@ -2852,7 +2852,7 @@ H5D_istore_prune_by_extent(const H5D_io_info_t *io_info) udata.common.mesg = &dset->shared->layout; udata.dims = curr_dims; - if(H5B_iterate(dset->ent.file, io_info->dxpl_id, H5B_ISTORE, H5D_istore_prune_extent, dset->shared->layout.u.chunk.addr, &udata) < 0) + if(H5B_iterate(dset->oloc.file, io_info->dxpl_id, H5B_ISTORE, H5D_istore_prune_extent, dset->shared->layout.u.chunk.addr, &udata) < 0) HGOTO_ERROR(H5E_IO, H5E_CANTINIT, 0, "unable to iterate over B-tree") done: |