diff options
Diffstat (limited to 'src/H5Dpkg.h')
| -rw-r--r-- | src/H5Dpkg.h | 167 |
1 files changed, 83 insertions, 84 deletions
diff --git a/src/H5Dpkg.h b/src/H5Dpkg.h index b71ad6a..e3562bb 100644 --- a/src/H5Dpkg.h +++ b/src/H5Dpkg.h @@ -42,9 +42,6 @@ /* Package Private Macros */ /**************************/ -/* The number of reserved IDs in dataset ID group */ -#define H5D_RESERVED_ATOMS 0 - /* Set the minimum object header size to create objects with */ #define H5D_MINHDR_SIZE 256 @@ -588,158 +585,160 @@ H5_DLLVAR const H5B2_class_t H5D_BT2_FILT[1]; /* Package Private Prototypes */ /******************************/ -H5_DLL H5D_t *H5D_create(H5F_t *file, hid_t type_id, const H5S_t *space, +H5_DLL H5D_t *H5D__create(H5F_t *file, hid_t type_id, const H5S_t *space, hid_t dcpl_id, hid_t dapl_id, hid_t dxpl_id); H5_DLL H5D_t *H5D__create_named(const H5G_loc_t *loc, const char *name, hid_t type_id, const H5S_t *space, hid_t lcpl_id, hid_t dcpl_id, hid_t dapl_id, hid_t dxpl_id); -H5_DLL herr_t H5D_get_space_status(H5D_t *dset, H5D_space_status_t *allocation, +H5_DLL herr_t H5D__get_space_status(H5D_t *dset, H5D_space_status_t *allocation, hid_t dxpl_id); -H5_DLL herr_t H5D_alloc_storage(H5D_t *dset, hid_t dxpl_id, H5D_time_alloc_t time_alloc, +H5_DLL herr_t H5D__alloc_storage(H5D_t *dset, hid_t dxpl_id, H5D_time_alloc_t time_alloc, hbool_t full_overwrite, hsize_t old_dim[]); -H5_DLL hsize_t H5D_get_storage_size(H5D_t *dset, hid_t dxpl_id); -H5_DLL haddr_t H5D_get_offset(const H5D_t *dset); -H5_DLL herr_t H5D_iterate(void *buf, hid_t type_id, const H5S_t *space, +H5_DLL herr_t H5D__get_storage_size(H5D_t *dset, hid_t dxpl_id, hsize_t *storage_size); +H5_DLL haddr_t H5D__get_offset(const H5D_t *dset); +H5_DLL herr_t H5D__iterate(void *buf, hid_t type_id, const H5S_t *space, H5D_operator_t op, void *operator_data); -H5_DLL void * H5D_vlen_get_buf_size_alloc(size_t size, void *info); -H5_DLL herr_t H5D_vlen_get_buf_size(void *elem, hid_t type_id, unsigned ndim, +H5_DLL void *H5D__vlen_get_buf_size_alloc(size_t size, void *info); +H5_DLL herr_t H5D__vlen_get_buf_size(void *elem, hid_t type_id, unsigned ndim, const hsize_t *point, void *op_data); -H5_DLL herr_t H5D_check_filters(H5D_t *dataset); -H5_DLL herr_t H5D_set_extent(H5D_t *dataset, const hsize_t *size, hid_t dxpl_id); -H5_DLL herr_t H5D_get_dxpl_cache(hid_t dxpl_id, H5D_dxpl_cache_t **cache); -H5_DLL herr_t H5D_flush_sieve_buf(H5D_t *dataset, hid_t dxpl_id); -H5_DLL herr_t H5D_flush_real(H5D_t *dataset, hid_t dxpl_id); -H5_DLL herr_t H5D_mark(H5D_t *dataset, hid_t dxpl_id, unsigned flags); +H5_DLL herr_t H5D__check_filters(H5D_t *dataset); +H5_DLL herr_t H5D__set_extent(H5D_t *dataset, const hsize_t *size, hid_t dxpl_id); +H5_DLL herr_t H5D__get_dxpl_cache(hid_t dxpl_id, H5D_dxpl_cache_t **cache); +H5_DLL herr_t H5D__flush_sieve_buf(H5D_t *dataset, hid_t dxpl_id); +H5_DLL herr_t H5D__flush_real(H5D_t *dataset, hid_t dxpl_id); +H5_DLL herr_t H5D__mark(H5D_t *dataset, hid_t dxpl_id, unsigned flags); /* Functions that perform direct serial I/O operations */ -H5_DLL herr_t H5D_select_read(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__select_read(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); -H5_DLL herr_t H5D_select_write(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__select_write(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); /* Functions that perform scatter-gather serial I/O operations */ -H5_DLL herr_t H5D_scatter_mem(const void *_tscat_buf, +H5_DLL herr_t H5D__scatter_mem(const void *_tscat_buf, const H5S_t *space, H5S_sel_iter_t *iter, size_t nelmts, const H5D_dxpl_cache_t *dxpl_cache, void *_buf); -H5_DLL herr_t H5D_scatgath_read(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__scatgath_read(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); -H5_DLL herr_t H5D_scatgath_write(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__scatgath_write(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); /* Functions that operate on dataset's layout information */ -H5_DLL herr_t H5D_layout_set_io_ops(const H5D_t *dataset); -H5_DLL size_t H5D_layout_meta_size(const H5F_t *f, const H5O_layout_t *layout, +H5_DLL herr_t H5D__layout_set_io_ops(const H5D_t *dataset); +H5_DLL size_t H5D__layout_meta_size(const H5F_t *f, const H5O_layout_t *layout, hbool_t include_compact_data); -H5_DLL herr_t H5D_layout_set_latest_version(H5O_layout_t *layout, +H5_DLL herr_t H5D__layout_set_latest_version(H5O_layout_t *layout, const H5S_t *space, const H5D_dcpl_cache_t *dcpl_cache); -H5_DLL herr_t H5D_layout_set_latest_indexing(H5O_layout_t *layout, +H5_DLL herr_t H5D__layout_set_latest_indexing(H5O_layout_t *layout, const H5S_t *space, const H5D_dcpl_cache_t *dcpl_cache); -H5_DLL herr_t H5D_layout_oh_create(H5F_t *file, hid_t dxpl_id, H5O_t *oh, +H5_DLL herr_t H5D__layout_oh_create(H5F_t *file, hid_t dxpl_id, H5O_t *oh, H5D_t *dset, hid_t dapl_id); -H5_DLL herr_t H5D_layout_oh_read(H5D_t *dset, hid_t dxpl_id, hid_t dapl_id, +H5_DLL herr_t H5D__layout_oh_read(H5D_t *dset, hid_t dxpl_id, hid_t dapl_id, H5P_genplist_t *plist); -H5_DLL herr_t H5D_layout_oh_write(H5D_t *dataset, hid_t dxpl_id, H5O_t *oh, +H5_DLL herr_t H5D__layout_oh_write(H5D_t *dataset, hid_t dxpl_id, H5O_t *oh, unsigned update_flags); /* Functions that operate on contiguous storage */ -H5_DLL herr_t H5D_contig_alloc(H5F_t *f, hid_t dxpl_id, +H5_DLL herr_t H5D__contig_alloc(H5F_t *f, hid_t dxpl_id, H5O_storage_contig_t *storage); -H5_DLL hbool_t H5D_contig_is_space_alloc(const H5O_storage_t *storage); -H5_DLL herr_t H5D_contig_fill(H5D_t *dset, hid_t dxpl_id); -H5_DLL haddr_t H5D_contig_get_addr(const H5D_t *dset); -H5_DLL herr_t H5D_contig_read(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, +H5_DLL hbool_t H5D__contig_is_space_alloc(const H5O_storage_t *storage); +H5_DLL herr_t H5D__contig_fill(H5D_t *dset, hid_t dxpl_id); +H5_DLL herr_t H5D__contig_read(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); -H5_DLL herr_t H5D_contig_write(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, +H5_DLL herr_t H5D__contig_write(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); -H5_DLL herr_t H5D_contig_copy(H5F_t *f_src, const H5O_storage_contig_t *storage_src, +H5_DLL herr_t H5D__contig_copy(H5F_t *f_src, const H5O_storage_contig_t *storage_src, H5F_t *f_dst, H5O_storage_contig_t *storage_dst, H5T_t *src_dtype, H5O_copy_t *cpy_info, hid_t dxpl_id); +H5_DLL herr_t H5D__contig_delete(H5F_t *f, hid_t dxpl_id, + const H5O_storage_t *store); + /* Functions that operate on chunked dataset storage */ -H5_DLL htri_t H5D_chunk_cacheable(const H5D_io_info_t *io_info, haddr_t caddr, +H5_DLL htri_t H5D__chunk_cacheable(const H5D_io_info_t *io_info, haddr_t caddr, hbool_t write_op); -H5_DLL herr_t H5D_chunk_cinfo_cache_reset(H5D_chunk_cached_t *last); -H5_DLL herr_t H5D_chunk_create(H5D_t *dset /*in,out*/, hid_t dxpl_id); -H5_DLL herr_t H5D_chunk_set_info(const H5D_t *dset); -H5_DLL herr_t H5D_chunk_init(H5F_t *f, hid_t dxpl_id, const H5D_t *dset, +H5_DLL herr_t H5D__chunk_create(H5D_t *dset /*in,out*/, hid_t dxpl_id); +H5_DLL herr_t H5D__chunk_set_info(const H5D_t *dset); +H5_DLL herr_t H5D__chunk_init(H5F_t *f, hid_t dxpl_id, const H5D_t *dset, hid_t dapl_id); -H5_DLL hbool_t H5D_chunk_is_space_alloc(const H5O_storage_t *storage); -H5_DLL herr_t H5D_chunk_lookup(const H5D_t *dset, hid_t dxpl_id, +H5_DLL hbool_t H5D__chunk_is_space_alloc(const H5O_storage_t *storage); +H5_DLL herr_t H5D__chunk_lookup(const H5D_t *dset, hid_t dxpl_id, const hsize_t *chunk_offset, hsize_t chunk_idx, H5D_chunk_ud_t *udata); -H5_DLL void *H5D_chunk_lock(const H5D_io_info_t *io_info, +H5_DLL void *H5D__chunk_lock(const H5D_io_info_t *io_info, H5D_chunk_ud_t *udata, hbool_t relax, hbool_t prev_unfilt_chunk); -H5_DLL herr_t H5D_chunk_unlock(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__chunk_unlock(const H5D_io_info_t *io_info, const H5D_chunk_ud_t *udata, hbool_t dirty, void *chunk, uint32_t naccessed); -H5_DLL herr_t H5D_chunk_flush_entry(const H5D_t *dset, hid_t dxpl_id, +H5_DLL herr_t H5D__chunk_flush_entry(const H5D_t *dset, hid_t dxpl_id, const H5D_dxpl_cache_t *dxpl_cache, H5D_rdcc_ent_t *ent, hbool_t reset); -H5_DLL herr_t H5D_chunk_allocated(H5D_t *dset, hid_t dxpl_id, hsize_t *nbytes); -H5_DLL herr_t H5D_chunk_allocate(H5D_t *dset, hid_t dxpl_id, +H5_DLL herr_t H5D__chunk_allocated(H5D_t *dset, hid_t dxpl_id, hsize_t *nbytes); +H5_DLL herr_t H5D__chunk_allocate(H5D_t *dset, hid_t dxpl_id, hbool_t full_overwrite, hsize_t old_dim[]); -H5_DLL herr_t H5D_chunk_update_old_edge_chunks(H5D_t *dset, hid_t dxpl_id, +H5_DLL herr_t H5D__chunk_update_old_edge_chunks(H5D_t *dset, hid_t dxpl_id, hsize_t old_dim[]); -H5_DLL herr_t H5D_chunk_prune_by_extent(H5D_t *dset, hid_t dxpl_id, +H5_DLL herr_t H5D__chunk_prune_by_extent(H5D_t *dset, hid_t dxpl_id, const hsize_t *old_dim); #ifdef H5_HAVE_PARALLEL -H5_DLL herr_t H5D_chunk_addrmap(const H5D_io_info_t *io_info, haddr_t chunk_addr[]); +H5_DLL herr_t H5D__chunk_addrmap(const H5D_io_info_t *io_info, haddr_t chunk_addr[]); #endif /* H5_HAVE_PARALLEL */ -H5_DLL herr_t H5D_chunk_update_cache(H5D_t *dset, hid_t dxpl_id); -H5_DLL herr_t H5D_chunk_copy(H5F_t *f_src, H5O_storage_chunk_t *storage_src, +H5_DLL herr_t H5D__chunk_update_cache(H5D_t *dset, hid_t dxpl_id); +H5_DLL herr_t H5D__chunk_copy(H5F_t *f_src, H5O_storage_chunk_t *storage_src, H5O_layout_chunk_t *layout_src, H5F_t *f_dst, H5O_storage_chunk_t *storage_dst, const H5S_extent_t *ds_extent_src, const H5T_t *dt_src, const H5O_pline_t *pline_src, H5O_copy_t *cpy_info, hid_t dxpl_id); -H5_DLL herr_t H5D_chunk_bh_info(H5F_t *f, hid_t dxpl_id, H5O_layout_t *layout, +H5_DLL herr_t H5D__chunk_bh_info(H5F_t *f, hid_t dxpl_id, H5O_layout_t *layout, const H5O_pline_t *pline, hsize_t *btree_size); -H5_DLL herr_t H5D_chunk_dump_index(H5D_t *dset, hid_t dxpl_id, FILE *stream); -H5_DLL herr_t H5D_chunk_dest(H5F_t *f, hid_t dxpl_id, H5D_t *dset); -H5_DLL herr_t H5D_chunk_create_flush_dep(const H5D_rdcc_t *rdcc, +H5_DLL herr_t H5D__chunk_dump_index(H5D_t *dset, hid_t dxpl_id, FILE *stream); +H5_DLL herr_t H5D__chunk_dest(H5F_t *f, hid_t dxpl_id, H5D_t *dset); +H5_DLL herr_t H5D__chunk_delete(H5F_t *f, hid_t dxpl_id, H5O_t *oh, + H5O_storage_t *store); +H5_DLL herr_t H5D__chunk_create_flush_dep(const H5D_rdcc_t *rdcc, const H5O_layout_chunk_t *layout, const hsize_t offset[], void *parent); -H5_DLL herr_t H5D_chunk_update_flush_dep(const H5D_rdcc_t *rdcc, +H5_DLL herr_t H5D__chunk_update_flush_dep(const H5D_rdcc_t *rdcc, const H5O_layout_chunk_t *layout, const hsize_t offset[], void *old_parent, void *new_parent); #ifdef H5D_CHUNK_DEBUG -H5_DLL herr_t H5D_chunk_stats(const H5D_t *dset, hbool_t headers); +H5_DLL herr_t H5D__chunk_stats(const H5D_t *dset, hbool_t headers); #endif /* H5D_CHUNK_DEBUG */ /* Functions that operate on compact dataset storage */ -H5_DLL herr_t H5D_compact_fill(H5D_t *dset, hid_t dxpl_id); -H5_DLL herr_t H5D_compact_copy(H5F_t *f_src, H5O_storage_compact_t *storage_src, +H5_DLL herr_t H5D__compact_fill(H5D_t *dset, hid_t dxpl_id); +H5_DLL herr_t H5D__compact_copy(H5F_t *f_src, H5O_storage_compact_t *storage_src, H5F_t *f_dst, H5O_storage_compact_t *storage_dst, H5T_t *src_dtype, H5O_copy_t *cpy_info, hid_t dxpl_id); /* Functions that operate on EFL (External File List)*/ -H5_DLL hbool_t H5D_efl_is_space_alloc(const H5O_storage_t *storage); -H5_DLL herr_t H5D_efl_bh_info(H5F_t *f, hid_t dxpl_id, H5O_efl_t *efl, +H5_DLL hbool_t H5D__efl_is_space_alloc(const H5O_storage_t *storage); +H5_DLL herr_t H5D__efl_bh_info(H5F_t *f, hid_t dxpl_id, H5O_efl_t *efl, hsize_t *heap_size); /* Functions that perform fill value operations on datasets */ -H5_DLL herr_t H5D_fill(const void *fill, const H5T_t *fill_type, void *buf, +H5_DLL herr_t H5D__fill(const void *fill, const H5T_t *fill_type, void *buf, const H5T_t *buf_type, const H5S_t *space, hid_t dxpl_id); -H5_DLL herr_t H5D_fill_init(H5D_fill_buf_info_t *fb_info, void *caller_fill_buf, +H5_DLL herr_t H5D__fill_init(H5D_fill_buf_info_t *fb_info, void *caller_fill_buf, H5MM_allocate_t alloc_func, void *alloc_info, H5MM_free_t free_func, void *free_info, const H5O_fill_t *fill, const H5T_t *dset_type, hid_t dset_type_id, size_t nelmts, size_t min_buf_size, hid_t dxpl_id); -H5_DLL herr_t H5D_fill_refill_vl(H5D_fill_buf_info_t *fb_info, size_t nelmts, +H5_DLL herr_t H5D__fill_refill_vl(H5D_fill_buf_info_t *fb_info, size_t nelmts, hid_t dxpl_id); -H5_DLL herr_t H5D_fill_release(H5D_fill_buf_info_t *fb_info); -H5_DLL herr_t H5D_fill_term(H5D_fill_buf_info_t *fb_info); +H5_DLL herr_t H5D__fill_term(H5D_fill_buf_info_t *fb_info); /* Functions that operate on chunk proxy objects */ -H5_DLL herr_t H5D_chunk_proxy_create(H5D_t *dset, hid_t dxpl_id, +H5_DLL herr_t H5D__chunk_proxy_create(H5D_t *dset, hid_t dxpl_id, H5D_chunk_ud_t *udata, H5D_rdcc_ent_t *ent); -H5_DLL herr_t H5D_chunk_proxy_remove(const H5D_t *dset, hid_t dxpl_it, +H5_DLL herr_t H5D__chunk_proxy_remove(const H5D_t *dset, hid_t dxpl_it, H5D_rdcc_ent_t *ent); -H5_DLL herr_t H5D_chunk_proxy_mark(H5D_rdcc_ent_t *ent, hbool_t dirty); -H5_DLL herr_t H5D_chunk_proxy_create_flush_dep(H5D_rdcc_ent_t *ent, +H5_DLL herr_t H5D__chunk_proxy_mark(H5D_rdcc_ent_t *ent, hbool_t dirty); +H5_DLL herr_t H5D__chunk_proxy_create_flush_dep(H5D_rdcc_ent_t *ent, void *parent); -H5_DLL herr_t H5D_chunk_proxy_update_flush_dep(H5D_rdcc_ent_t *ent, +H5_DLL herr_t H5D__chunk_proxy_update_flush_dep(H5D_rdcc_ent_t *ent, void *old_parent, void *new_parent); #ifdef H5_HAVE_PARALLEL @@ -750,34 +749,34 @@ H5_DLL herr_t H5D_chunk_proxy_update_flush_dep(H5D_rdcc_ent_t *ent, #endif /*H5Dmpio_DEBUG*/ #endif/*H5S_DEBUG*/ /* MPI-IO function to read, it will select either regular or irregular read */ -H5_DLL herr_t H5D_mpio_select_read(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__mpio_select_read(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); /* MPI-IO function to write, it will select either regular or irregular read */ -H5_DLL herr_t H5D_mpio_select_write(const H5D_io_info_t *io_info, +H5_DLL herr_t H5D__mpio_select_write(const H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space); /* MPI-IO functions to handle contiguous collective IO */ -H5_DLL herr_t H5D_contig_collective_read(H5D_io_info_t *io_info, +H5_DLL herr_t H5D__contig_collective_read(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); -H5_DLL herr_t H5D_contig_collective_write(H5D_io_info_t *io_info, +H5_DLL herr_t H5D__contig_collective_write(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); /* MPI-IO functions to handle chunked collective IO */ -H5_DLL herr_t H5D_chunk_collective_read(H5D_io_info_t *io_info, +H5_DLL herr_t H5D__chunk_collective_read(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); -H5_DLL herr_t H5D_chunk_collective_write(H5D_io_info_t *io_info, +H5_DLL herr_t H5D__chunk_collective_write(H5D_io_info_t *io_info, const H5D_type_info_t *type_info, hsize_t nelmts, const H5S_t *file_space, const H5S_t *mem_space, H5D_chunk_map_t *fm); /* MPI-IO function to check if a direct I/O transfer is possible between * memory and the file */ -H5_DLL htri_t H5D_mpio_opt_possible(const H5D_io_info_t *io_info, +H5_DLL htri_t H5D__mpio_opt_possible(const H5D_io_info_t *io_info, const H5S_t *file_space, const H5S_t *mem_space, const H5D_type_info_t *type_info, const H5D_chunk_map_t *fm); @@ -785,10 +784,10 @@ H5_DLL htri_t H5D_mpio_opt_possible(const H5D_io_info_t *io_info, /* Testing functions */ #ifdef H5D_TESTING -H5_DLL herr_t H5D_layout_version_test(hid_t did, unsigned *version); -H5_DLL herr_t H5D_layout_contig_size_test(hid_t did, hsize_t *size); -H5_DLL herr_t H5D_layout_idx_type_test(hid_t did, H5D_chunk_index_t *idx_type); -H5_DLL herr_t H5D_current_cache_size_test(hid_t did, size_t *nbytes_used, int *nused); +H5_DLL herr_t H5D__layout_version_test(hid_t did, unsigned *version); +H5_DLL herr_t H5D__layout_contig_size_test(hid_t did, hsize_t *size); +H5_DLL herr_t H5D__layout_idx_type_test(hid_t did, H5D_chunk_index_t *idx_type); +H5_DLL herr_t H5D__current_cache_size_test(hid_t did, size_t *nbytes_used, int *nused); #endif /* H5D_TESTING */ #endif /*_H5Dpkg_H*/ |