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-rw-r--r--src/H5F.c1215
1 files changed, 401 insertions, 814 deletions
diff --git a/src/H5F.c b/src/H5F.c
index aef9d1d..6d62c08 100644
--- a/src/H5F.c
+++ b/src/H5F.c
@@ -5,12 +5,10 @@
* *
* This file is part of HDF5. The full HDF5 copyright notice, including *
* terms governing use, modification, and redistribution, is contained in *
- * the files COPYING and Copyright.html. COPYING can be found at the root *
- * of the source code distribution tree; Copyright.html can be found at the *
- * root level of an installed copy of the electronic HDF5 document set and *
- * is linked from the top-level documents page. It can also be found at *
- * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
- * access to either file, you may request a copy from help@hdfgroup.org. *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
/****************/
@@ -23,20 +21,20 @@
/***********/
/* Headers */
/***********/
-#include "H5private.h" /* Generic Functions */
-#include "H5Aprivate.h" /* Attributes */
+#include "H5private.h" /* Generic Functions */
+#include "H5Aprivate.h" /* Attributes */
#include "H5ACprivate.h" /* Metadata cache */
-#include "H5Dprivate.h" /* Datasets */
-#include "H5Eprivate.h" /* Error handling */
-#include "H5Fpkg.h" /* File access */
-#include "H5FDprivate.h" /* File drivers */
-#include "H5Gprivate.h" /* Groups */
-#include "H5Iprivate.h" /* IDs */
-#include "H5MFprivate.h" /* File memory management */
-#include "H5MMprivate.h" /* Memory management */
-#include "H5Pprivate.h" /* Property lists */
-#include "H5SMprivate.h" /* Shared Object Header Messages */
-#include "H5Tprivate.h" /* Datatypes */
+#include "H5CXprivate.h" /* API Contexts */
+#include "H5Dprivate.h" /* Datasets */
+#include "H5Eprivate.h" /* Error handling */
+#include "H5Fpkg.h" /* File access */
+#include "H5FDprivate.h" /* File drivers */
+#include "H5Gprivate.h" /* Groups */
+#include "H5Iprivate.h" /* IDs */
+#include "H5MFprivate.h" /* File memory management */
+#include "H5MMprivate.h" /* Memory management */
+#include "H5Pprivate.h" /* Property lists */
+#include "H5Tprivate.h" /* Datatypes */
/****************/
@@ -78,10 +76,10 @@ hbool_t H5_PKG_INIT_VAR = FALSE;
/* File ID class */
static const H5I_class_t H5I_FILE_CLS[1] = {{
- H5I_FILE, /* ID class value */
- 0, /* Class flags */
- 0, /* # of reserved IDs for class */
- (H5I_free_t)H5F_close /* Callback routine for closing objects of this class */
+ H5I_FILE, /* ID class value */
+ 0, /* Class flags */
+ 0, /* # of reserved IDs for class */
+ (H5I_free_t)H5F__close_cb /* Callback routine for closing objects of this class */
}};
@@ -115,27 +113,22 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5F_term_package
+ * Function: H5F_term_package
*
- * Purpose: Terminate this interface: free all memory and reset global
- * variables to their initial values. Release all ID groups
- * associated with this interface.
- *
- * Return: Success: Positive if anything was done that might
- * have affected other interfaces; zero
- * otherwise.
- *
- * Failure: Never fails.
- *
- * Programmer: Robb Matzke
- * Friday, February 19, 1999
+ * Purpose: Terminate this interface: free all memory and reset global
+ * variables to their initial values. Release all ID groups
+ * associated with this interface.
*
+ * Return: Success: Positive if anything was done that might
+ * have affected other interfaces;
+ * zero otherwise.
+ * Failure: Never fails.
*-------------------------------------------------------------------------
*/
int
H5F_term_package(void)
{
- int n = 0;
+ int n = 0;
FUNC_ENTER_NOAPI_NOINIT_NOERR
@@ -143,7 +136,7 @@ H5F_term_package(void)
if(H5I_nmembers(H5I_FILE) > 0) {
(void)H5I_clear_type(H5I_FILE, FALSE, FALSE);
n++; /*H5I*/
- } /* end if */
+ } /* end if */
else {
/* Make certain we've cleaned up all the shared file objects */
H5F_sfile_assert_num(0);
@@ -162,18 +155,14 @@ H5F_term_package(void)
/*-------------------------------------------------------------------------
- * Function: H5Fget_create_plist
- *
- * Purpose: Get an atom for a copy of the file-creation property list for
- * this file. This function returns an atom with a copy of the
- * properties used to create a file.
- *
- * Return: Success: template ID
- *
- * Failure: FAIL
+ * Function: H5Fget_create_plist
*
- * Programmer: Unknown
+ * Purpose: Get an atom for a copy of the file-creation property list for
+ * this file. This function returns an atom with a copy of the
+ * properties used to create a file.
*
+ * Return: Success: template ID
+ * Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
@@ -202,24 +191,19 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_access_plist
+ * Function: H5Fget_access_plist
*
- * Purpose: Returns a copy of the file access property list of the
- * specified file.
+ * Purpose: Returns a copy of the file access property list of the
+ * specified file.
*
* NOTE: Make sure that, if you are going to overwrite
* information in the copied property list that was
* previously opened and assigned to the property list, then
* you must close it before overwriting the values.
*
- * Return: Success: Object ID for a copy of the file access
- * property list.
- *
- * Failure: FAIL
- *
- * Programmer: Robb Matzke
- * Wednesday, February 18, 1998
- *
+ * Return: Success: Object ID for a copy of the file access
+ * property list.
+ * Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
@@ -245,23 +229,19 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_obj_count
+ * Function: H5Fget_obj_count
*
- * Purpose: Public function returning the number of opened object IDs
- * (files, datasets, groups and datatypes) in the same file.
- *
- * Return: Non-negative on success; negative on failure.
- *
- * Programmer: Raymond Lu
- * Wednesday, Dec 5, 2001
+ * Purpose: Public function returning the number of opened object IDs
+ * (files, datasets, groups and datatypes) in the same file.
*
+ * Return: Non-negative on success; negative on failure.
*-------------------------------------------------------------------------
*/
ssize_t
H5Fget_obj_count(hid_t file_id, unsigned types)
{
H5F_t *f = NULL; /* File to query */
- size_t obj_count = 0; /* Number of opened objects */
+ size_t obj_count = 0; /* Number of opened objects */
ssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
@@ -286,21 +266,11 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_object_ids
- *
- * Purpose: Public function to return a list of opened object IDs.
+ * Function: H5Fget_object_ids
*
- * Return: Non-negative on success; negative on failure.
- *
- * Programmer: Raymond Lu
- * Wednesday, Dec 5, 2001
- *
- * Modification:
- * Raymond Lu
- * 24 September 2008
- * Changed the return value to ssize_t and MAX_OBJTS to size_t to
- * accommadate potential large number of objects.
+ * Purpose: Public function to return a list of opened object IDs.
*
+ * Return: Non-negative on success; negative on failure.
*-------------------------------------------------------------------------
*/
ssize_t
@@ -341,10 +311,6 @@ done:
*
* Return: Success: non-negative value.
* Failure: negative.
- *
- * Programmer: Raymond Lu
- * Sep. 16, 2002
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -374,23 +340,16 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fis_hdf5
- *
- * Purpose: Check the file signature to detect an HDF5 file.
- *
- * Bugs: This function is not robust: it only uses the default file
- * driver when attempting to open the file when in fact it
- * should use all known file drivers.
- *
- * Return: Success: TRUE/FALSE
+ * Function: H5Fis_hdf5
*
- * Failure: Negative
+ * Purpose: Check the file signature to detect an HDF5 file.
*
- * Programmer: Unknown
+ * Bugs: This function is not robust: it only uses the default file
+ * driver when attempting to open the file when in fact it
+ * should use all known file drivers.
*
- * Modifications:
- * Robb Matzke, 1999-08-02
- * Rewritten to use the virtual file layer.
+ * Return: Success: TRUE/FALSE
+ * Failure: Negative
*-------------------------------------------------------------------------
*/
htri_t
@@ -406,228 +365,180 @@ H5Fis_hdf5(const char *name)
HGOTO_ERROR(H5E_ARGS, H5E_BADRANGE, FAIL, "no file name specified")
/* call the private is_HDF5 function */
- if((ret_value = H5F__is_hdf5(name, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id)) < 0)
+ /* (Should not trigger raw data I/O - QAK, 2018/01/03) */
+ if((ret_value = H5F__is_hdf5(name)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_NOTHDF5, FAIL, "unable open file")
done:
-
FUNC_LEAVE_API(ret_value)
} /* end H5Fis_hdf5() */
/*-------------------------------------------------------------------------
- * Function: H5Fcreate
- *
- * Purpose: This is the primary function for creating HDF5 files . The
- * flags parameter determines whether an existing file will be
- * overwritten or not. All newly created files are opened for
- * both reading and writing. All flags may be combined with the
- * bit-wise OR operator (`|') to change the behavior of the file
- * create call.
- *
- * The more complex behaviors of a file's creation and access
- * are controlled through the file-creation and file-access
- * property lists. The value of H5P_DEFAULT for a template
- * value indicates that the library should use the default
- * values for the appropriate template.
- *
- * See also: H5Fpublic.h for the list of supported flags. H5Ppublic.h for
- * the list of file creation and file access properties.
- *
- * Return: Success: A file ID
- *
- * Failure: FAIL
- *
- * Programmer: Unknown
- *
+ * Function: H5Fcreate
+ *
+ * Purpose: This is the primary function for creating HDF5 files . The
+ * flags parameter determines whether an existing file will be
+ * overwritten or not. All newly created files are opened for
+ * both reading and writing. All flags may be combined with the
+ * bit-wise OR operator (`|') to change the behavior of the file
+ * create call.
+ *
+ * The more complex behaviors of a file's creation and access
+ * are controlled through the file-creation and file-access
+ * property lists. The value of H5P_DEFAULT for a template
+ * value indicates that the library should use the default
+ * values for the appropriate template.
+ *
+ * See also: H5Fpublic.h for the list of supported flags. H5Ppublic.h for
+ * the list of file creation and file access properties.
+ *
+ * Return: Success: A file ID
+ * Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Fcreate(const char *filename, unsigned flags, hid_t fcpl_id, hid_t fapl_id)
{
- hbool_t ci_load = FALSE; /* whether MDC ci load requested */
- hbool_t ci_write = FALSE; /* whether MDC CI write requested */
- H5F_t *new_file = NULL; /*file struct for new file */
- hid_t dxpl_id = H5AC_ind_read_dxpl_id; /*dxpl used by library */
- hid_t ret_value; /*return value */
+ H5F_t *new_file = NULL; /* file struct for new file */
+ hid_t ret_value; /* return value */
- FUNC_ENTER_API(FAIL)
+ FUNC_ENTER_API(H5I_INVALID_HID)
H5TRACE4("i", "*sIuii", filename, flags, fcpl_id, fapl_id);
/* Check/fix arguments */
- if(!filename || !*filename)
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid file name")
+ if (!filename || !*filename)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file name")
+
/* In this routine, we only accept the following flags:
* H5F_ACC_EXCL, H5F_ACC_TRUNC and H5F_ACC_SWMR_WRITE
*/
- if(flags & ~(H5F_ACC_EXCL | H5F_ACC_TRUNC | H5F_ACC_SWMR_WRITE))
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid flags")
+ if (flags & ~(H5F_ACC_EXCL | H5F_ACC_TRUNC | H5F_ACC_SWMR_WRITE))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid flags")
+
/* The H5F_ACC_EXCL and H5F_ACC_TRUNC flags are mutually exclusive */
- if((flags & H5F_ACC_EXCL) && (flags & H5F_ACC_TRUNC))
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "mutually exclusive flags for file creation")
+ if ((flags & H5F_ACC_EXCL) && (flags & H5F_ACC_TRUNC))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "mutually exclusive flags for file creation")
/* Check file creation property list */
- if(H5P_DEFAULT == fcpl_id)
+ if (H5P_DEFAULT == fcpl_id)
fcpl_id = H5P_FILE_CREATE_DEFAULT;
else
- if(TRUE != H5P_isa_class(fcpl_id, H5P_FILE_CREATE))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not file create property list")
+ if (TRUE != H5P_isa_class(fcpl_id, H5P_FILE_CREATE))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "not file create property list")
- /* Verify access property list and get correct dxpl */
- if(H5P_verify_apl_and_dxpl(&fapl_id, H5P_CLS_FACC, &dxpl_id, H5I_INVALID_HID, TRUE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set access and transfer property lists")
+ /* Verify access property list and set up collective metadata if appropriate */
+ if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, H5I_INVALID_HID, TRUE) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info")
- /*
- * Adjust bit flags by turning on the creation bit and making sure that
+ /* Adjust bit flags by turning on the creation bit and making sure that
* the EXCL or TRUNC bit is set. All newly-created files are opened for
* reading and writing.
*/
- if (0==(flags & (H5F_ACC_EXCL|H5F_ACC_TRUNC)))
+ if (0 == (flags & (H5F_ACC_EXCL | H5F_ACC_TRUNC)))
flags |= H5F_ACC_EXCL; /*default*/
flags |= H5F_ACC_RDWR | H5F_ACC_CREAT;
- /*
- * Create a new file or truncate an existing file.
- */
- if(NULL == (new_file = H5F_open(filename, flags, fcpl_id, fapl_id, dxpl_id)))
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to create file")
-
- /* Check to see if both SWMR and cache image are requested. Fail if so */
- if(H5C_cache_image_status(new_file, &ci_load, &ci_write) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
- if((ci_load || ci_write) && (flags & (H5F_ACC_SWMR_READ | H5F_ACC_SWMR_WRITE)))
- HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and cache image")
+ /* Create a new file or truncate an existing file. */
+ if (NULL == (new_file = H5F__create(filename, flags, fcpl_id, fapl_id)))
+ HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "unable to create file")
/* Get an atom for the file */
- if((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to atomize file")
+ if ((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
+ HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to atomize file")
/* Keep this ID in file object structure */
new_file->file_id = ret_value;
done:
if(ret_value < 0 && new_file && H5F_try_close(new_file, NULL) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "problems closing file")
+ HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, H5I_INVALID_HID, "problems closing file")
FUNC_LEAVE_API(ret_value)
} /* end H5Fcreate() */
/*-------------------------------------------------------------------------
- * Function: H5Fopen
- *
- * Purpose: This is the primary function for accessing existing HDF5
- * files. The FLAGS argument determines whether writing to an
- * existing file will be allowed or not. All flags may be
- * combined with the bit-wise OR operator (`|') to change the
- * behavior of the file open call. The more complex behaviors
- * of a file's access are controlled through the file-access
- * property list.
- *
- * See Also: H5Fpublic.h for a list of possible values for FLAGS.
+ * Function: H5Fopen
*
- * Return: Success: A file ID
+ * Purpose: This is the primary function for accessing existing HDF5
+ * files. The FLAGS argument determines whether writing to an
+ * existing file will be allowed or not. All flags may be
+ * combined with the bit-wise OR operator (`|') to change the
+ * behavior of the file open call. The more complex behaviors
+ * of a file's access are controlled through the file-access
+ * property list.
*
- * Failure: FAIL
+ * See Also: H5Fpublic.h for a list of possible values for FLAGS.
*
- * Programmer: Unknown
+ * Return: Success: A file ID
*
- * Modifications:
- * Robb Matzke, 1997-07-18
- * File struct creation and destruction is through H5F_new() and
- * H5F__dest(). Reading the root symbol table entry is done with
- * H5G_decode().
+ * Failure: FAIL
*
- * Robb Matzke, 1997-09-23
- * Most of the work is now done by H5F_open() since H5Fcreate()
- * and H5Fopen() originally contained almost identical code.
- *
- * Robb Matzke, 1998-02-18
- * Added better error checking for the flags and the file access
- * property list. It used to be possible to make the library
- * dump core by passing an object ID that was not a file access
- * property list.
- *
- * Robb Matzke, 1999-08-02
- * The file access property list is passed to the H5F_open() as
- * object IDs.
*-------------------------------------------------------------------------
*/
hid_t
H5Fopen(const char *filename, unsigned flags, hid_t fapl_id)
{
- hbool_t ci_load = FALSE; /* whether MDC ci load requested */
- hbool_t ci_write = FALSE; /* whether MDC CI write requested */
- H5F_t *new_file = NULL; /*file struct for new file */
- hid_t dxpl_id = H5AC_ind_read_dxpl_id; /*dxpl used by library */
- hid_t ret_value; /*return value */
+ H5F_t *new_file = NULL; /* file struct for new file */
+ hid_t ret_value; /* return value */
- FUNC_ENTER_API(FAIL)
+ FUNC_ENTER_API(H5I_INVALID_HID)
H5TRACE3("i", "*sIui", filename, flags, fapl_id);
/* Check/fix arguments. */
if(!filename || !*filename)
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid file name")
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file name")
/* Reject undefined flags (~H5F_ACC_PUBLIC_FLAGS) and the H5F_ACC_TRUNC & H5F_ACC_EXCL flags */
if((flags & ~H5F_ACC_PUBLIC_FLAGS) ||
(flags & H5F_ACC_TRUNC) || (flags & H5F_ACC_EXCL))
- HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid file open flags")
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, H5I_INVALID_HID, "invalid file open flags")
/* Asking for SWMR write access on a read-only file is invalid */
if((flags & H5F_ACC_SWMR_WRITE) && 0 == (flags & H5F_ACC_RDWR))
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "SWMR write access on a file open for read-only access is not allowed")
+ HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "SWMR write access on a file open for read-only access is not allowed")
/* Asking for SWMR read access on a non-read-only file is invalid */
if((flags & H5F_ACC_SWMR_READ) && (flags & H5F_ACC_RDWR))
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "SWMR read access on a file open for read-write access is not allowed")
+ HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "SWMR read access on a file open for read-write access is not allowed")
- /* Verify access property list and get correct dxpl */
- if(H5P_verify_apl_and_dxpl(&fapl_id, H5P_CLS_FACC, &dxpl_id, H5I_INVALID_HID, TRUE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set access and transfer property lists")
+ /* Verify access property list and set up collective metadata if appropriate */
+ if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, H5I_INVALID_HID, TRUE) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info")
/* Open the file */
- if(NULL == (new_file = H5F_open(filename, flags, H5P_FILE_CREATE_DEFAULT, fapl_id, dxpl_id)))
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to open file")
-
- /* Check to see if both SWMR and cache image are requested. Fail if so */
- if(H5C_cache_image_status(new_file, &ci_load, &ci_write) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
- if((ci_load || ci_write) && (flags & (H5F_ACC_SWMR_READ | H5F_ACC_SWMR_WRITE)))
- HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and cache image")
+ if(NULL == (new_file = H5F__open(filename, flags, H5P_FILE_CREATE_DEFAULT, fapl_id)))
+ HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, H5I_INVALID_HID, "unable to open file")
/* Get an atom for the file */
if((ret_value = H5I_register(H5I_FILE, new_file, TRUE)) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, FAIL, "unable to atomize file handle")
+ HGOTO_ERROR(H5E_ATOM, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to atomize file handle")
/* Keep this ID in file object structure */
new_file->file_id = ret_value;
done:
if(ret_value < 0 && new_file && H5F_try_close(new_file, NULL) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "problems closing file")
+ HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, H5I_INVALID_HID, "problems closing file")
FUNC_LEAVE_API(ret_value)
} /* end H5Fopen() */
/*-------------------------------------------------------------------------
- * Function: H5Fflush
- *
- * Purpose: Flushes all outstanding buffers of a file to disk but does
- * not remove them from the cache. The OBJECT_ID can be a file,
- * dataset, group, attribute, or named data type.
- *
- * Return: Non-negative on success/Negative on failure
+ * Function: H5Fflush
*
- * Programmer: Robb Matzke
- * Thursday, August 6, 1998
+ * Purpose: Flushes all outstanding buffers of a file to disk but does
+ * not remove them from the cache. The OBJECT_ID can be a file,
+ * dataset, group, attribute, or named data type.
*
+ * Return: Non-negative on success/Negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fflush(hid_t object_id, H5F_scope_t scope)
{
- H5F_t *f = NULL; /* File to flush */
- H5O_loc_t *oloc = NULL; /* Object location for ID */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *f = NULL; /* File to flush */
+ H5O_loc_t *oloc = NULL; /* Object location for ID */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "iFs", object_id, scope);
@@ -640,7 +551,7 @@ H5Fflush(hid_t object_id, H5F_scope_t scope)
case H5I_GROUP:
{
- H5G_t *grp;
+ H5G_t *grp;
if(NULL == (grp = (H5G_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid group identifier")
@@ -650,7 +561,7 @@ H5Fflush(hid_t object_id, H5F_scope_t scope)
case H5I_DATATYPE:
{
- H5T_t *type;
+ H5T_t *type;
if(NULL == (type = (H5T_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid type identifier")
@@ -660,7 +571,7 @@ H5Fflush(hid_t object_id, H5F_scope_t scope)
case H5I_DATASET:
{
- H5D_t *dset;
+ H5D_t *dset;
if(NULL == (dset = (H5D_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid dataset identifier")
@@ -670,7 +581,7 @@ H5Fflush(hid_t object_id, H5F_scope_t scope)
case H5I_ATTR:
{
- H5A_t *attr;
+ H5A_t *attr;
if(NULL == (attr = (H5A_t *)H5I_object(object_id)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid attribute identifier")
@@ -703,24 +614,22 @@ H5Fflush(hid_t object_id, H5F_scope_t scope)
/* Flush the file */
/*
- * Nothing to do if the file is read only. This determination is
+ * Nothing to do if the file is read only. This determination is
* made at the shared open(2) flags level, implying that opening a
* file twice, once for read-only and once for read-write, and then
* calling H5Fflush() with the read-only handle, still causes data
* to be flushed.
*/
if(H5F_ACC_RDWR & H5F_INTENT(f)) {
- /* Flush other files, depending on scope */
- if(H5F_SCOPE_GLOBAL == scope) {
- /* Call the flush routine for mounted file hierarchies */
- if(H5F_flush_mounts(f, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush mounted file hierarchy")
- } /* end if */
- else {
- /* Call the flush routine, for this file */
- if(H5F__flush(f, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
- } /* end else */
+ hid_t fapl_id = H5P_DEFAULT; /* FAPL to use */
+
+ /* Verify access property list and set up collective metadata if appropriate */
+ if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, object_id, TRUE) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set access property list info")
+
+ /* Flush the file */
+ if(H5F__flush(f, scope) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
} /* end if */
done:
@@ -729,60 +638,34 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fclose
- *
- * Purpose: This function closes the file specified by FILE_ID by
- * flushing all data to storage, and terminating access to the
- * file through FILE_ID. If objects (e.g., datasets, groups,
- * etc.) are open in the file then the underlying storage is not
- * closed until those objects are closed; however, all data for
- * the file and the open objects is flushed.
- *
- * Return: Success: Non-negative
- *
- * Failure: Negative
+ * Function: H5Fclose
*
- * Programmer: Robb Matzke
- * Saturday, February 20, 1999
- *
- * Modifications:
+ * Purpose: This function closes the file specified by FILE_ID by
+ * flushing all data to storage, and terminating access to the
+ * file through FILE_ID. If objects (e.g., datasets, groups,
+ * etc.) are open in the file then the underlying storage is not
+ * closed until those objects are closed; however, all data for
+ * the file and the open objects is flushed.
*
+ * Return: Success: Non-negative
+ * Failure: Negative
*-------------------------------------------------------------------------
*/
herr_t
H5Fclose(hid_t file_id)
{
- H5F_t *f = NULL;
- int nref;
- herr_t ret_value = SUCCEED;
+ herr_t ret_value = SUCCEED;
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
- /* Check/fix arguments. */
+ /* Check arguments */
if(H5I_FILE != H5I_get_type(file_id))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file ID")
+ HGOTO_ERROR(H5E_FILE, H5E_BADTYPE, FAIL, "not a file ID")
- /* Flush file if this is the last reference to this id and we have write
- * intent, unless it will be flushed by the "shared" file being closed.
- * This is only necessary to replicate previous behaviour, and could be
- * disabled by an option/property to improve performance. */
- if(NULL == (f = (H5F_t *)H5I_object(file_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
- if((f->shared->nrefs > 1) && (H5F_INTENT(f) & H5F_ACC_RDWR)) {
- if((nref = H5I_get_ref(file_id, FALSE)) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTGET, FAIL, "can't get ID ref count")
- if(nref == 1)
- if(H5F__flush(f, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
- HGOTO_ERROR(H5E_CACHE, H5E_CANTFLUSH, FAIL, "unable to flush cache")
- } /* end if */
-
- /*
- * Decrement reference count on atom. When it reaches zero the file will
- * be closed.
- */
- if(H5I_dec_app_ref(file_id) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTCLOSEFILE, FAIL, "decrementing file ID failed")
+ /* Close the file */
+ if(H5F__close(file_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "closing file ID failed")
done:
FUNC_LEAVE_API(ret_value)
@@ -790,29 +673,24 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Freopen
- *
- * Purpose: Reopen a file. The new file handle which is returned points
- * to the same file as the specified file handle. Both handles
- * share caches and other information. The only difference
- * between the handles is that the new handle is not mounted
- * anywhere and no files are mounted on it.
+ * Function: H5Freopen
*
- * Return: Success: New file ID
- *
- * Failure: FAIL
- *
- * Programmer: Robb Matzke
- * Friday, October 16, 1998
+ * Purpose: Reopen a file. The new file handle which is returned points
+ * to the same file as the specified file handle. Both handles
+ * share caches and other information. The only difference
+ * between the handles is that the new handle is not mounted
+ * anywhere and no files are mounted on it.
*
+ * Return: Success: New file ID
+ * Failure: FAIL
*-------------------------------------------------------------------------
*/
hid_t
H5Freopen(hid_t file_id)
{
- H5F_t *old_file = NULL;
- H5F_t *new_file = NULL;
- hid_t ret_value;
+ H5F_t *old_file = NULL;
+ H5F_t *new_file = NULL;
+ hid_t ret_value;
FUNC_ENTER_API(FAIL)
H5TRACE1("i", "i", file_id);
@@ -838,7 +716,7 @@ H5Freopen(hid_t file_id)
done:
if(ret_value < 0 && new_file)
- if(H5F__dest(new_file, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
+ if(H5F__dest(new_file, FALSE) < 0)
HDONE_ERROR(H5E_FILE, H5E_CANTCLOSEFILE, FAIL, "can't close file")
FUNC_LEAVE_API(ret_value)
@@ -846,16 +724,12 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_intent
- *
- * Purpose: Public API to retrieve the file's 'intent' flags passed
- * during H5Fopen()
- *
- * Return: Non-negative on success/negative on failure
+ * Function: H5Fget_intent
*
- * Programmer: James Laird
- * August 23, 2006
+ * Purpose: Public API to retrieve the file's 'intent' flags passed
+ * during H5Fopen()
*
+ * Return: Non-negative on success/negative on failure
*-------------------------------------------------------------------------
*/
herr_t
@@ -868,7 +742,7 @@ H5Fget_intent(hid_t file_id, unsigned *intent_flags)
/* If no intent flags were passed in, exit quietly */
if(intent_flags) {
- H5F_t * file; /* Pointer to file structure */
+ H5F_t *file; /* Pointer to file structure */
/* Get the internal file structure */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
@@ -906,18 +780,13 @@ done:
*
* Return: Success: Amount of free space for type
* Failure: Negative
- *
- * Programmer: Quincey Koziol
- * koziol@ncsa.uiuc.edu
- * Oct 6, 2003
- *
*-------------------------------------------------------------------------
*/
hssize_t
H5Fget_freespace(hid_t file_id)
{
H5F_t *file; /* File object for file ID */
- hsize_t tot_space; /* Amount of free space in the file */
+ hsize_t tot_space; /* Amount of free space in the file */
hssize_t ret_value; /* Return value */
FUNC_ENTER_API(FAIL)
@@ -927,8 +796,8 @@ H5Fget_freespace(hid_t file_id)
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
- /* Go get the actual amount of free space in the file */
- if(H5MF_get_freespace(file, H5AC_ind_read_dxpl_id, &tot_space, NULL) < 0)
+ /* Get the free space in the file */
+ if(H5F__get_freespace(file, &tot_space) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to check free space for file")
ret_value = (hssize_t)tot_space;
@@ -943,23 +812,16 @@ done:
*
* Purpose: Retrieves the file size of the HDF5 file. This function
* is called after an existing file is opened in order
- * to learn the true size of the underlying file.
+ * to learn the true size of the underlying file.
*
* Return: Success: Non-negative
* Failure: Negative
- *
- * Programmer: David Pitt
- * david.pitt@bigpond.com
- * Apr 27, 2004
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_filesize(hid_t file_id, hsize_t *size)
{
H5F_t *file; /* File object for file ID */
- haddr_t eof; /* End of file address */
- haddr_t eoa; /* End of allocation address */
haddr_t max_eof_eoa; /* Maximum of the EOA & EOF */
haddr_t base_addr; /* Base address for the file */
herr_t ret_value = SUCCEED; /* Return value */
@@ -972,11 +834,9 @@ H5Fget_filesize(hid_t file_id, hsize_t *size)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* Go get the actual file size */
- eof = H5FD_get_eof(file->shared->lf, H5FD_MEM_DEFAULT);
- eoa = H5FD_get_eoa(file->shared->lf, H5FD_MEM_DEFAULT);
- max_eof_eoa = MAX(eof, eoa);
- if(HADDR_UNDEF == max_eof_eoa)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "file get eof/eoa requests failed")
+ if(H5F__get_max_eof_eoa(file, &max_eof_eoa) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "file can't get max eof/eoa ")
+
base_addr = H5FD_get_base_addr(file->shared->lf);
if(size)
@@ -990,42 +850,38 @@ done:
/*-------------------------------------------------------------------------
* Function: H5Fget_file_image
*
- * Purpose: If a buffer is provided (via the buf_ptr argument) and is
- * big enough (size in buf_len argument), load *buf_ptr with
- * an image of the open file whose ID is provided in the
- * file_id parameter, and return the number of bytes copied
- * to the buffer.
+ * Purpose: If a buffer is provided (via the buf_ptr argument) and is
+ * big enough (size in buf_len argument), load *buf_ptr with
+ * an image of the open file whose ID is provided in the
+ * file_id parameter, and return the number of bytes copied
+ * to the buffer.
*
- * If the buffer exists, but is too small to contain an image
- * of the indicated file, return a negative number.
+ * If the buffer exists, but is too small to contain an image
+ * of the indicated file, return a negative number.
*
- * Finally, if no buffer is provided, return the size of the
- * buffer needed. This value is simply the eoa of the target
- * file.
+ * Finally, if no buffer is provided, return the size of the
+ * buffer needed. This value is simply the eoa of the target
+ * file.
*
- * Note that any user block is skipped.
+ * Note that any user block is skipped.
*
- * Also note that the function may not be used on files
- * opened with either the split/multi file driver or the
- * family file driver.
+ * Also note that the function may not be used on files
+ * opened with either the split/multi file driver or the
+ * family file driver.
*
- * In the former case, the sparse address space makes the
- * get file image operation impractical, due to the size of
- * the image typically required.
+ * In the former case, the sparse address space makes the
+ * get file image operation impractical, due to the size of
+ * the image typically required.
*
- * In the case of the family file driver, the problem is
- * the driver message in the super block, which will prevent
- * the image being opened with any driver other than the
- * family file driver -- which negates the purpose of the
- * operation. This can be fixed, but no resources for
- * this now.
+ * In the case of the family file driver, the problem is
+ * the driver message in the super block, which will prevent
+ * the image being opened with any driver other than the
+ * family file driver -- which negates the purpose of the
+ * operation. This can be fixed, but no resources for
+ * this now.
*
* Return: Success: Bytes copied / number of bytes needed.
* Failure: negative value
- *
- * Programmer: John Mainzer
- * 11/15/11
- *
*-------------------------------------------------------------------------
*/
ssize_t
@@ -1042,7 +898,8 @@ H5Fget_file_image(hid_t file_id, void *buf_ptr, size_t buf_len)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
/* call private get_file_image function */
- if((ret_value = H5F_get_file_image(file, buf_ptr, buf_len, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id)) < 0)
+ /* (Should not trigger raw data I/O - QAK, 2018/01/03) */
+ if((ret_value = H5F__get_file_image(file, buf_ptr, buf_len)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to get file image")
done:
@@ -1051,21 +908,17 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_mdc_config
+ * Function: H5Fget_mdc_config
*
- * Purpose: Retrieves the current automatic cache resize configuration
- * from the metadata cache, and return it in *config_ptr.
+ * Purpose: Retrieves the current automatic cache resize configuration
+ * from the metadata cache, and return it in *config_ptr.
*
- * Note that the version field of *config_Ptr must be correctly
- * filled in by the caller. This allows us to adapt for
- * obsolete versions of the structure.
- *
- * Return: Success: SUCCEED
- * Failure: FAIL
- *
- * Programmer: John Mainzer
- * 3/24/05
+ * Note that the version field of *config_Ptr must be correctly
+ * filled in by the caller. This allows us to adapt for
+ * obsolete versions of the structure.
*
+ * Return: Success: SUCCEED
+ * Failure: FAIL
*-------------------------------------------------------------------------
*/
herr_t
@@ -1096,15 +949,11 @@ done:
* Function: H5Fset_mdc_config
*
* Purpose: Sets the current metadata cache automatic resize
- * configuration, using the contents of the instance of
- * H5AC_cache_config_t pointed to by config_ptr.
+ * configuration, using the contents of the instance of
+ * H5AC_cache_config_t pointed to by config_ptr.
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: John Mainzer
- * 3/24/05
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -1133,16 +982,12 @@ done:
* Function: H5Fget_mdc_hit_rate
*
* Purpose: Retrieves the current hit rate from the metadata cache.
- * This rate is the overall hit rate since the last time
- * the hit rate statistics were reset either manually or
- * automatically.
+ * This rate is the overall hit rate since the last time
+ * the hit rate statistics were reset either manually or
+ * automatically.
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: John Mainzer
- * 3/24/05
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -1174,17 +1019,13 @@ done:
* Function: H5Fget_mdc_size
*
* Purpose: Retrieves the maximum size, minimum clean size, current
- * size, and current number of entries from the metadata
- * cache associated with the specified file. If any of
- * the ptr parameters are NULL, the associated datum is
- * not returned.
+ * size, and current number of entries from the metadata
+ * cache associated with the specified file. If any of
+ * the ptr parameters are NULL, the associated datum is
+ * not returned.
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: John Mainzer
- * 3/24/05
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -1220,20 +1061,16 @@ done:
* Function: H5Freset_mdc_hit_rate_stats
*
* Purpose: Reset the hit rate statistic whose current value can
- * be obtained via the H5Fget_mdc_hit_rate() call. Note
- * that this statistic will also be reset once per epoch
- * by the automatic cache resize code if it is enabled.
+ * be obtained via the H5Fget_mdc_hit_rate() call. Note
+ * that this statistic will also be reset once per epoch
+ * by the automatic cache resize code if it is enabled.
*
- * It is probably a bad idea to call this function unless
- * you are controlling cache size from your program instead
- * of using our cache size control code.
+ * It is probably a bad idea to call this function unless
+ * you are controlling cache size from your program instead
+ * of using our cache size control code.
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: John Mainzer
- * 3/24/05
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -1269,15 +1106,11 @@ done:
* If an error occurs then the buffer pointed to by `name' (NULL or non-NULL)
* is unchanged and the function returns a negative value.
*
- * Note: This routine returns the name that was used to open the file,
- * not the actual name after resolving symlinks, etc.
+ * Note: This routine returns the name that was used to open the file,
+ * not the actual name after resolving symlinks, etc.
*
* Return: Success: The length of the file name
* Failure: Negative
- *
- * Programmer: Raymond Lu
- * June 29, 2004
- *
*-------------------------------------------------------------------------
*/
ssize_t
@@ -1327,17 +1160,13 @@ done:
* Function: H5Fget_info2
*
* Purpose: Gets general information about the file, including:
- * 1. Get storage size for superblock extension if there is one.
+ * 1. Get storage size for superblock extension if there is one.
* 2. Get the amount of btree and heap storage for entries
* in the SOHM table if there is one.
- * 3. The amount of free space tracked in the file.
+ * 3. The amount of free space tracked in the file.
*
* Return: Success: non-negative on success
* Failure: Negative
- *
- * Programmer: Vailin Choi
- * July 11, 2007
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -1371,26 +1200,9 @@ H5Fget_info2(hid_t obj_id, H5F_info2_t *finfo)
} /* end else */
HDassert(f->shared);
- /* Reset file info struct */
- HDmemset(finfo, 0, sizeof(*finfo));
-
- /* Get the size of the superblock and any superblock extensions */
- if(H5F__super_size(f, H5AC_ind_read_dxpl_id, &finfo->super.super_size, &finfo->super.super_ext_size) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve superblock sizes")
-
- /* Get the size of any persistent free space */
- if(H5MF_get_freespace(f, H5AC_ind_read_dxpl_id, &finfo->free.tot_space, &finfo->free.meta_size) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve free space information")
-
- /* Check for SOHM info */
- if(H5F_addr_defined(f->shared->sohm_addr))
- if(H5SM_ih_size(f, H5AC_ind_read_dxpl_id, &finfo->sohm.hdr_size, &finfo->sohm.msgs_info) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve SOHM index & heap storage info")
-
- /* Set version # fields */
- finfo->super.version = f->shared->sblock->super_vers;
- finfo->sohm.version = f->shared->sohm_vers;
- finfo->free.version = HDF5_FREESPACE_VERSION;
+ /* Get the file info */
+ if(H5F__get_info(f, finfo) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to retrieve file info")
done:
FUNC_LEAVE_API(ret_value)
@@ -1404,90 +1216,28 @@ done:
*
* Return: Success: non-negative on success
* Failure: Negative
- *
- * Programmer: Vailin Choi; October 2013
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_metadata_read_retry_info(hid_t file_id, H5F_retry_info_t *info)
{
- H5F_t *file; /* File object for file ID */
- unsigned i, j; /* Local index variable */
- size_t tot_size; /* Size of each retries[i] */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File object for file ID */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE2("e", "i*x", file_id, info);
/* Check args */
- if(!info)
+ if (!info)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no info struct")
/* Get the file pointer */
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
- /* Copy the # of bins for "retries" array */
- info->nbins = file->shared->retries_nbins;
-
- /* Initialize the array of "retries" */
- HDmemset(info->retries, 0, sizeof(info->retries));
-
- /* Return if there are no bins -- no retries */
- if(!info->nbins)
- HGOTO_DONE(SUCCEED);
-
- /* Calculate size for each retries[i] */
- tot_size = info->nbins * sizeof(uint32_t);
-
- /* Map and copy information to info's retries for metadata items with tracking for read retries */
- j = 0;
- for(i = 0; i < H5AC_NTYPES; i++) {
- switch(i) {
- case H5AC_OHDR_ID:
- case H5AC_OHDR_CHK_ID:
- case H5AC_BT2_HDR_ID:
- case H5AC_BT2_INT_ID:
- case H5AC_BT2_LEAF_ID:
- case H5AC_FHEAP_HDR_ID:
- case H5AC_FHEAP_DBLOCK_ID:
- case H5AC_FHEAP_IBLOCK_ID:
- case H5AC_FSPACE_HDR_ID:
- case H5AC_FSPACE_SINFO_ID:
- case H5AC_SOHM_TABLE_ID:
- case H5AC_SOHM_LIST_ID:
- case H5AC_EARRAY_HDR_ID:
- case H5AC_EARRAY_IBLOCK_ID:
- case H5AC_EARRAY_SBLOCK_ID:
- case H5AC_EARRAY_DBLOCK_ID:
- case H5AC_EARRAY_DBLK_PAGE_ID:
- case H5AC_FARRAY_HDR_ID:
- case H5AC_FARRAY_DBLOCK_ID:
- case H5AC_FARRAY_DBLK_PAGE_ID:
- case H5AC_SUPERBLOCK_ID:
- HDassert(j < H5F_NUM_METADATA_READ_RETRY_TYPES);
- if(file->shared->retries[i] != NULL) {
- /* Allocate memory for retries[i]
- *
- * This memory should be released by the user with
- * the H5free_memory() call.
- */
- if(NULL == (info->retries[j] = (uint32_t *)H5MM_malloc(tot_size)))
- HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
-
- /* Copy the information */
- HDmemcpy(info->retries[j], file->shared->retries[i], tot_size);
- } /* end if */
-
- /* Increment location in info->retries[] array */
- j++;
- break;
-
- default:
- break;
- } /* end switch */
- } /* end for */
+ /* Get the retry info */
+ if(H5F__get_metadata_read_retry_info(file, info) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't get metadata read retry info")
done:
FUNC_LEAVE_API(ret_value)
@@ -1495,18 +1245,15 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fget_free_sections
- *
- * Purpose: To get free-space section information for free-space manager with
- * TYPE that is associated with file FILE_ID.
- * If SECT_INFO is null, this routine returns the total # of free-space
- * sections.
- *
- * Return: Success: non-negative, the total # of free space sections
- * Failure: negative
+ * Function: H5Fget_free_sections
*
- * Programmer: Vailin Choi; July 1st, 2009
+ * Purpose: To get free-space section information for free-space manager with
+ * TYPE that is associated with file FILE_ID.
+ * If SECT_INFO is null, this routine returns the total # of free-space
+ * sections.
*
+ * Return: Success: non-negative, the total # of free space sections
+ * Failure: negative
*-------------------------------------------------------------------------
*/
ssize_t
@@ -1525,8 +1272,8 @@ H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects,
if(sect_info && nsects == 0)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "nsects must be > 0")
- /* Go get the free-space section information in the file */
- if((ret_value = H5MF_get_free_sections(file, H5AC_ind_read_dxpl_id, type, nsects, sect_info)) < 0)
+ /* Get the free-space section information in the file */
+ if((ret_value = H5F__get_free_sections(file, type, nsects, sect_info)) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to check free space for file")
done:
@@ -1543,16 +1290,13 @@ done:
*
* Return: Success: non-negative
* Failure: negative
- *
- * Programmer: Neil Fortner; December 30, 2010
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fclear_elink_file_cache(hid_t file_id)
{
- H5F_t *file; /* File */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
@@ -1561,9 +1305,10 @@ H5Fclear_elink_file_cache(hid_t file_id)
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID")
- /* Release the EFC */
+ /* See if there's an EFC */
if(file->shared->efc)
- if(H5F_efc_release(file->shared->efc) < 0)
+ /* Release the EFC */
+ if(H5F__efc_release(file->shared->efc) < 0)
HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release external file cache")
done:
@@ -1572,55 +1317,19 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fstart_swmr_write
- *
- * Purpose: To enable SWMR writing mode for the file
- * 1) Refresh opened objects: part 1
- * 2) Flush & reset accumulator
- * 3) Mark the file in SWMR writing mode
- * 4) Set metadata read attempts and retries info
- * 5) Disable accumulator
- * 6) Evict all cache entries except the superblock
- * 7) Refresh opened objects (part 2)
- * 8) Unlock the file
- *
- * Pre-conditions:
- * 1) The file being opened has v3 superblock
- * 2) The file is opened with H5F_ACC_RDWR
- * 3) The file is not already marked for SWMR writing
- * 4) Current implementaion for opened objects:
- * --only allow datasets and groups without attributes
- * --disallow named datatype with/without attributes
- * --disallow opened attributes attached to objects
- * NOTE: Currently, only opened groups and datasets are allowed
- * when enabling SWMR via H5Fstart_swmr_write().
- * Will later implement a different approach--
- * set up flush dependency/proxy even for file opened without
- * SWMR to resolve issues with opened objects.
- *
- * Return: Non-negative on success/negative on failure
- *
- * Programmer:
- * Vailin Choi; Feb 2014
+ * Function: H5Fstart_swmr_write
+ *
+ * Purpose: To enable SWMR writing mode for the file
+ *
+ * Return: Non-negative on success/negative on failure
*
*-------------------------------------------------------------------------
*/
herr_t
H5Fstart_swmr_write(hid_t file_id)
{
- hbool_t ci_load = FALSE; /* whether MDC ci load requested */
- hbool_t ci_write = FALSE; /* whether MDC CI write requested */
- H5F_t *file = NULL; /* File info */
- size_t grp_dset_count=0; /* # of open objects: groups & datasets */
- size_t nt_attr_count=0; /* # of opened named datatypes + opened attributes */
- hid_t *obj_ids=NULL; /* List of ids */
- H5G_loc_t *obj_glocs=NULL; /* Group location of the object */
- H5O_loc_t *obj_olocs=NULL; /* Object location */
- H5G_name_t *obj_paths=NULL; /* Group hierarchy path */
- size_t u; /* Local index variable */
- hbool_t setup = FALSE; /* Boolean flag to indicate whether SWMR setting is enabled */
- H5F_io_info2_t fio_info; /* I/O info for operation */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file = NULL; /* File info */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
@@ -1629,170 +1338,15 @@ H5Fstart_swmr_write(hid_t file_id)
if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file")
- /* Should have write permission */
- if((H5F_INTENT(file) & H5F_ACC_RDWR) == 0)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "no write intent on file")
-
- if(file->shared->sblock->super_vers < HDF5_SUPERBLOCK_VERSION_3)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file superblock version should be at least 3")
- HDassert(file->shared->latest_flags == H5F_LATEST_ALL_FLAGS);
-
- /* Should not be marked for SWMR writing mode already */
- if(file->shared->sblock->status_flags & H5F_SUPER_SWMR_WRITE_ACCESS)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "file already in SWMR writing mode")
-
- HDassert(file->shared->sblock->status_flags & H5F_SUPER_WRITE_ACCESS);
-
- /* Check to see if cache image is enabled. Fail if so */
- if(H5C_cache_image_status(file, &ci_load, &ci_write) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "can't get MDC cache image status")
- if(ci_load || ci_write )
- HGOTO_ERROR(H5E_FILE, H5E_UNSUPPORTED, FAIL, "can't have both SWMR and MDC cache image")
-
- /* Flush data buffers */
- if(H5F__flush(file, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
-
- /* Get the # of opened named datatypes and attributes */
- if(H5F_get_obj_count(file, H5F_OBJ_DATATYPE|H5F_OBJ_ATTR, FALSE, &nt_attr_count) < 0)
- HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
- if(nt_attr_count)
- HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "named datatypes and/or attributes opened in the file")
-
- /* Get the # of opened datasets and groups */
- if(H5F_get_obj_count(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, FALSE, &grp_dset_count) < 0)
- HGOTO_ERROR(H5E_INTERNAL, H5E_BADITER, FAIL, "H5F_get_obj_count failed")
-
- if(grp_dset_count) {
- /* Allocate space for group and object locations */
- if((obj_ids = (hid_t *) H5MM_malloc(grp_dset_count * sizeof(hid_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for hid_t")
- if((obj_glocs = (H5G_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_loc_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_loc_t")
- if((obj_olocs = (H5O_loc_t *) H5MM_malloc(grp_dset_count * sizeof(H5O_loc_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5O_loc_t")
- if((obj_paths = (H5G_name_t *) H5MM_malloc(grp_dset_count * sizeof(H5G_name_t))) == NULL)
- HGOTO_ERROR(H5E_FILE, H5E_NOSPACE, FAIL, "can't allocate buffer for H5G_name_t")
-
- /* Get the list of opened object ids (groups & datasets) */
- if(H5F_get_obj_ids(file, H5F_OBJ_GROUP|H5F_OBJ_DATASET, grp_dset_count, obj_ids, FALSE, &grp_dset_count) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "H5F_get_obj_ids failed")
-
- /* Refresh opened objects (groups, datasets) in the file */
- for(u = 0; u < grp_dset_count; u++) {
- H5O_loc_t *oloc; /* object location */
- H5G_loc_t tmp_loc;
-
- /* Set up the id's group location */
- obj_glocs[u].oloc = &obj_olocs[u];
- obj_glocs[u].path = &obj_paths[u];
- H5G_loc_reset(&obj_glocs[u]);
-
- /* get the id's object location */
- if((oloc = H5O_get_loc(obj_ids[u])) == NULL)
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not an object")
-
- /* Make deep local copy of object's location information */
- H5G_loc(obj_ids[u], &tmp_loc);
- H5G_loc_copy(&obj_glocs[u], &tmp_loc, H5_COPY_DEEP);
-
- /* Close the object */
- if(H5I_dec_ref(obj_ids[u]) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CANTCLOSEOBJ, FAIL, "decrementing object ID failed")
- } /* end for */
- } /* end if */
-
- /* Set up I/O info for operation */
- fio_info.f = file;
- if(NULL == (fio_info.meta_dxpl = (H5P_genplist_t *)H5I_object(H5AC_ind_read_dxpl_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
- if(NULL == (fio_info.raw_dxpl = (H5P_genplist_t *)H5I_object(H5AC_rawdata_dxpl_id)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "can't get property list")
-
- /* Flush and reset the accumulator */
- if(H5F__accum_reset(&fio_info, TRUE) < 0)
- HGOTO_ERROR(H5E_IO, H5E_CANTRESET, FAIL, "can't reset accumulator")
-
- /* Turn on SWMR write in shared file open flags */
- file->shared->flags |= H5F_ACC_SWMR_WRITE;
-
- /* Mark the file in SWMR writing mode */
- file->shared->sblock->status_flags |= H5F_SUPER_SWMR_WRITE_ACCESS;
-
- /* Set up metadata read attempts */
- file->shared->read_attempts = H5F_SWMR_METADATA_READ_ATTEMPTS;
-
- /* Initialize "retries" and "retries_nbins" */
- if(H5F_set_retries(file) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
-
- /* Turn off usage of accumulator */
- file->shared->feature_flags &= ~(unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
- if(H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
-
- setup = TRUE;
-
- /* Mark superblock as dirty */
- if(H5F_super_dirty(file) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
-
- /* Flush the superblock */
- if(H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
-
- /* Evict all flushed entries in the cache except the pinned superblock */
- if(H5F__evict_cache_entries(file, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to evict file's cached information")
-
- /* Refresh (reopen) the objects (groups & datasets) in the file */
- for(u = 0; u < grp_dset_count; u++)
- if(H5O_refresh_metadata_reopen(obj_ids[u], &obj_glocs[u], H5AC_ind_read_dxpl_id, TRUE) < 0)
- HGOTO_ERROR(H5E_ATOM, H5E_CLOSEERROR, FAIL, "can't refresh-close object")
+ /* Set up collective metadata if appropriate */
+ if(H5CX_set_loc(file_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
- /* Unlock the file */
- if(H5FD_unlock(file->shared->lf) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTOPENFILE, FAIL, "unable to unlock the file")
+ /* Call the internal routine */
+ if(H5F__start_swmr_write(file) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTCONVERT, FAIL, "unable to convert file format")
done:
- if(ret_value < 0 && setup) {
- HDassert(file);
-
- /* Re-enable accumulator */
- file->shared->feature_flags |= (unsigned)H5FD_FEAT_ACCUMULATE_METADATA;
- if(H5FD_set_feature_flags(file->shared->lf, file->shared->feature_flags) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set feature_flags in VFD")
-
- /* Reset the # of read attempts */
- file->shared->read_attempts = H5F_METADATA_READ_ATTEMPTS;
- if(H5F_set_retries(file) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "can't set retries and retries_nbins")
-
- /* Un-set H5F_ACC_SWMR_WRITE in shared open flags */
- file->shared->flags &= ~H5F_ACC_SWMR_WRITE;
-
- /* Unmark the file: not in SWMR writing mode */
- file->shared->sblock->status_flags &= (uint8_t)(~H5F_SUPER_SWMR_WRITE_ACCESS);
-
- /* Mark superblock as dirty */
- if(H5F_super_dirty(file) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
-
- /* Flush the superblock */
- if(H5F_flush_tagged_metadata(file, H5AC__SUPERBLOCK_TAG, H5AC_ind_read_dxpl_id) < 0)
- HDONE_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush superblock")
- } /* end if */
-
- /* Free memory */
- if(obj_ids)
- H5MM_xfree(obj_ids);
- if(obj_glocs)
- H5MM_xfree(obj_glocs);
- if(obj_olocs)
- H5MM_xfree(obj_olocs);
- if(obj_paths)
- H5MM_xfree(obj_paths);
-
FUNC_LEAVE_API(ret_value)
} /* end H5Fstart_swmr_write() */
@@ -1804,14 +1358,13 @@ done:
* - Logging must have been set up via the fapl.
*
* Return: Non-negative on success/Negative on errors
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fstart_mdc_logging(hid_t file_id)
{
- H5F_t *file; /* File info */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File info */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
@@ -1837,14 +1390,13 @@ done:
* - Logging must have been set up via the fapl.
*
* Return: Non-negative on success/Negative on errors
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fstop_mdc_logging(hid_t file_id)
{
- H5F_t *file; /* File info */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File info */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", file_id);
@@ -1870,15 +1422,14 @@ done:
* log messages are being recorded at this time.
*
* Return: Non-negative on success/Negative on errors
- *
*-------------------------------------------------------------------------
*/
herr_t
H5Fget_mdc_logging_status(hid_t file_id, hbool_t *is_enabled,
hbool_t *is_currently_logging)
{
- H5F_t *file; /* File info */
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *file; /* File info */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE3("e", "i*b*b", file_id, is_enabled, is_currently_logging);
@@ -1897,114 +1448,75 @@ done:
/*-------------------------------------------------------------------------
- * Function: H5Fset_latest_format
+ * Function: H5Fset_libver_bounds
*
- * Purpose: Enable switching the "latest format" flag while a file is open.
+ * Purpose: Set to a different low and high bounds while a file is open.
+ * This public routine is introduced in place of
+ * H5Fset_latest_format() starting release 1.10.2.
+ * See explanation for H5Fset_latest_format() in H5Fdeprec.c.
*
* Return: Non-negative on success/Negative on failure
- *
- * Programmer: Quincey Koziol
- * Monday, September 21, 2015
*-------------------------------------------------------------------------
*/
herr_t
-H5Fset_latest_format(hid_t file_id, hbool_t latest_format)
+H5Fset_libver_bounds(hid_t file_id, H5F_libver_t low, H5F_libver_t high)
{
H5F_t *f; /* File */
- unsigned latest_flags; /* Latest format flags for file */
herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
- H5TRACE2("e", "ib", file_id, latest_format);
+ H5TRACE3("e", "iFvFv", file_id, low, high);
/* Check args */
if(NULL == (f = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "not a file ID")
- /* Check if the value is changing */
- latest_flags = H5F_USE_LATEST_FLAGS(f, H5F_LATEST_ALL_FLAGS);
- if(latest_format != (H5F_LATEST_ALL_FLAGS == latest_flags)) {
- /* Call the flush routine, for this file */
- if(H5F__flush(f, H5AC_ind_read_dxpl_id, H5AC_rawdata_dxpl_id, FALSE) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTFLUSH, FAIL, "unable to flush file's cached information")
+ /* Set up collective metadata if appropriate */
+ if(H5CX_set_loc(file_id) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
- /* Toggle the 'latest format' flag */
- H5F_SET_LATEST_FLAGS(f, latest_format ? H5F_LATEST_ALL_FLAGS : 0);
- } /* end if */
+ /* Call internal set_libver_bounds function */
+ if(H5F__set_libver_bounds(f, low, high) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "cannot set low/high bounds")
done:
FUNC_LEAVE_API(ret_value)
-} /* end H5Fset_latest_format() */
+} /* end H5Fset_libver_bounds() */
/*-------------------------------------------------------------------------
- * Function: H5Fformat_convert_super (Internal)
- *
- * Purpose: Downgrade the superblock version to v2 and
- * downgrade persistent file space to non-persistent
- * for 1.8 library.
- *
- * Return: Non-negative on success/Negative on failure
+ * Function: H5Fformat_convert
*
- * Programmer: Vailin Choi
- * Jan 2016
+ * Purpose: Downgrade the superblock version to v2 and
+ * downgrade persistent file space to non-persistent
+ * for 1.8 library.
*
+ * Return: Non-negative on success/Negative on failure
*-------------------------------------------------------------------------
*/
herr_t
H5Fformat_convert(hid_t fid)
{
- herr_t ret_value = SUCCEED; /* Return value */
+ H5F_t *f; /* File to flush */
+ herr_t ret_value = SUCCEED; /* Return value */
FUNC_ENTER_API(FAIL)
H5TRACE1("e", "i", fid);
- if(H5I_FILE == H5I_get_type(fid)) {
- H5F_t *f; /* File to flush */
- hbool_t mark_dirty = FALSE;
+ if(H5I_FILE != H5I_get_type(fid))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
- /* Get file object */
- if(NULL == (f = (H5F_t *)H5I_object(fid)))
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
+ /* Get file object */
+ if(NULL == (f = (H5F_t *)H5I_object(fid)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid file identifier")
- /* Check if the superblock should be downgraded */
- if(f->shared->sblock->super_vers > HDF5_SUPERBLOCK_VERSION_V18_LATEST) {
- f->shared->sblock->super_vers = HDF5_SUPERBLOCK_VERSION_V18_LATEST;
- mark_dirty = TRUE;
- } /* end if */
+ /* Set up collective metadata if appropriate */
+ if(H5CX_set_loc(fid) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "can't set collective metadata read info")
- /* Check for persistent freespace manager, which needs to be downgraded */
- if(!(f->shared->fs_strategy == H5F_FILE_SPACE_STRATEGY_DEF &&
- f->shared->fs_persist == H5F_FREE_SPACE_PERSIST_DEF &&
- f->shared->fs_threshold == H5F_FREE_SPACE_THRESHOLD_DEF &&
- f->shared->fs_page_size == H5F_FILE_SPACE_PAGE_SIZE_DEF)) {
- /* Check to remove free-space manager info message from superblock extension */
- if(H5F_addr_defined(f->shared->sblock->ext_addr))
- if(H5F_super_ext_remove_msg(f, H5AC_ind_read_dxpl_id, H5O_FSINFO_ID) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "error in removing message from superblock extension")
-
- /* Close freespace manager */
- if(H5MF_try_close(f, H5AC_ind_read_dxpl_id) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "unable to free free-space address")
-
- /* Set non-persistent freespace manager */
- f->shared->fs_strategy = H5F_FILE_SPACE_STRATEGY_DEF;
- f->shared->fs_persist = H5F_FREE_SPACE_PERSIST_DEF;
- f->shared->fs_threshold = H5F_FREE_SPACE_THRESHOLD_DEF;
- f->shared->fs_page_size = H5F_FILE_SPACE_PAGE_SIZE_DEF;
-
- /* Indicate that the superblock should be marked dirty */
- mark_dirty = TRUE;
- } /* end if */
-
- /* Check if we should mark the superblock dirty */
- if(mark_dirty)
- /* Mark superblock as dirty */
- if(H5F_super_dirty(f) < 0)
- HGOTO_ERROR(H5E_FILE, H5E_CANTMARKDIRTY, FAIL, "unable to mark superblock as dirty")
- } /* end if */
- else
- HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
+ /* Call the internal routine */
+ if(H5F__format_convert(f) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTCONVERT, FAIL, "unable to convert file format")
done:
FUNC_LEAVE_API(ret_value)
@@ -2018,9 +1530,6 @@ done:
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: Mohamad Chaarawi
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -2054,9 +1563,6 @@ done:
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: Mohamad Chaarawi
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -2098,9 +1604,6 @@ done:
*
* Return: Success: SUCCEED
* Failure: FAIL
- *
- * Programmer: Vailin Choi; March 2017
- *
*-------------------------------------------------------------------------
*/
herr_t
@@ -2126,3 +1629,87 @@ done:
FUNC_LEAVE_API(ret_value)
} /* H5Fget_mdc_image_info() */
+
+/*-------------------------------------------------------------------------
+ * Function: H5Fget_eoa
+ *
+ * Purpose: Returns the address of the first byte after the last
+ * allocated memory in the file.
+ * (See H5FDget_eoa() in H5FD.c)
+ *
+ * Return: Success: First byte after allocated memory.
+ * Failure: HADDR_UNDEF
+ *
+ * Return: Non-negative on success/Negative on errors
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5Fget_eoa(hid_t file_id, haddr_t *eoa)
+{
+ H5F_t *file; /* File object for file ID */
+ haddr_t rel_eoa; /* Relative address of EOA */
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_API(FAIL)
+ H5TRACE2("e", "i*a", file_id, eoa);
+
+ /* Check args */
+ if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
+
+ /* This public routine will work only for drivers with this feature enabled.*/
+ /* We might introduce a new feature flag in the future */
+ if(!H5F_HAS_FEATURE(file, H5FD_FEAT_SUPPORTS_SWMR_IO))
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "must use a SWMR-compatible VFD for this public routine")
+
+ /* The real work */
+ if(HADDR_UNDEF == (rel_eoa = H5FD_get_eoa(file->shared->lf, H5FD_MEM_DEFAULT)))
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "get_eoa request failed")
+
+ /* (Note compensating for base address subtraction in internal routine) */
+ if(eoa)
+ *eoa = rel_eoa + H5FD_get_base_addr(file->shared->lf);
+done:
+ FUNC_LEAVE_API(ret_value)
+} /* H5Fget_eoa() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5Fincrement_filesize
+ *
+ * Purpose: Set the EOA for the file to the maximum of (EOA, EOF) + increment
+ *
+ * Return: Non-negative on success/Negative on errors
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5Fincrement_filesize(hid_t file_id, hsize_t increment)
+{
+ H5F_t *file; /* File object for file ID */
+ haddr_t max_eof_eoa; /* Maximum of the relative EOA & EOF */
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_API(FAIL)
+ H5TRACE2("e", "ih", file_id, increment);
+
+ /* Check args */
+ if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "hid_t identifier is not a file ID")
+
+ /* This public routine will work only for drivers with this feature enabled.*/
+ /* We might introduce a new feature flag in the future */
+ if(!H5F_HAS_FEATURE(file, H5FD_FEAT_SUPPORTS_SWMR_IO))
+ HGOTO_ERROR(H5E_FILE, H5E_BADVALUE, FAIL, "must use a SWMR-compatible VFD for this public routine")
+
+ /* Get the maximum of EOA and EOF */
+ if(H5F__get_max_eof_eoa(file, &max_eof_eoa) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "file can't get max eof/eoa ")
+
+ /* Set EOA to the maximum value + increment */
+ /* H5FD_set_eoa() will add base_addr to max_eof_eoa */
+ if(H5FD_set_eoa(file->shared->lf, H5FD_MEM_DEFAULT, max_eof_eoa + increment) < 0)
+ HGOTO_ERROR(H5E_FILE, H5E_CANTSET, FAIL, "driver set_eoa request failed")
+
+done:
+ FUNC_LEAVE_API(ret_value)
+} /* H5Fincrement_filesize() */