diff options
Diffstat (limited to 'src/H5Fprivate.h')
-rw-r--r-- | src/H5Fprivate.h | 311 |
1 files changed, 118 insertions, 193 deletions
diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h index 0d0a65c..1a4d286 100644 --- a/src/H5Fprivate.h +++ b/src/H5Fprivate.h @@ -23,6 +23,16 @@ /* This is a near top-level header! Try not to include much! */ #include <H5private.h> +/* + * Feature: Define this constant to be non-zero if you want to enable code + * that minimizes the number of calls to lseek(). This has a huge + * performance benefit on some systems. Set this constant to zero + * on the compiler command line to disable that optimization. + */ +#ifndef H5F_OPT_SEEK +# define H5F_OPT_SEEK 1 +#endif + /* Maximum size of boot-block buffer */ #define H5F_BOOTBLOCK_SIZE 1024 @@ -42,120 +52,6 @@ #define H5F_ACC_EXCL 0x0004 /* Fail if file exists */ #define H5F_ACC_TRUNC 0x0008 /* Truncate existing file */ -/* - * Define the low-level file interface. - */ -#if FILELIB == POSIXBUFIO -typedef FILE *hdf_file_t; -# ifdef VMS -# define H5F_OPEN(p, a) (((a) & H5ACC_WRITE) ? \ - fopen ((p), "r+", "mbc=64") : \ - fopen ((p), "r", "mbc=64")) -# define H5F_CREATE(p) fopen ((p), "w+", "mbc=64") -# elif defined SUN && defined (__GNUC__) -# define H5F_OPEN(p, a) (((a) & H5ACC_WRITE) ? \ - fopen ((p), "r+") : \ - fopen ((p), "r")) -# define H5F_CREATE(p) fopen ((p), "w+") -# else -# define H5F_OPEN(p, a) (((a) & H5ACC_WRITE) ? \ - fopen ((p), "rb+") : \ - fopen((p), "rb")) -# define H5F_CREATE(p) fopen((p), "wb+") -# endif - -# define H5F_READ(f, b, n) (((size_t)(n) == (size_t)fread ((b), 1, \ - (size_t)(n), \ - (f))) ? \ - SUCCEED : FAIL) -# define H5F_WRITE(f, b, n) (((size_t)(n) == (size_t)fwrite ((b), 1, \ - (size_t)(n), \ - (f))) ? \ - SUCCEED : FAIL) -# define H5F_CLOSE(f) fclose (f) -# define H5F_FLUSH(f) (0==fflush (f) ? SUCCEED : FAIL) -# define H5F_SEEK(f,o) (0==fseek ((f), (long)(o), SEEK_SET) ? \ - SUCCEED : FAIL) -# define H5F_SEEK_CUR(f,o) (0==fseek ((f), (long)(o), SEEK_CUR) ? \ - SUCCEED : FAIL) -# define H5F_SEEKEND(f) (0==fseek ((f), (long)0, SEEK_END) ? \ - SUCCEED : FAIL) -# define H5F_TELL(f) ftell (f) -# define H5F_OPENERR(f) (!f) -# define H5F_INVALID_FILE ((FILE *)NULL) - - -#elif FILELIB == POSIXUNBUFIO -typedef int hdf_file_t; -# define H5F_OPEN(p, a) (((a) & H5ACC_WRITE) ? \ - open ((p), O_RDWR) : \ - open ((p), O_RDONLY)) -# define H5F_CREATE(p) open ((p), O_RDWR | O_CREAT | O_TRUNC, 0666) -# define H5F_CLOSE(f) close(f) -# define H5F_FLUSH(f) SUCCEED -# define H5F_READ(f, b, n) (((n)==read ((f), (char*)(b), (n))) ? \ - SUCCEED : FAIL) -# define H5F_WRITE(f, b, n) (((n)==write ((f), (char*)(b), (n))) ? \ - SUCCEED : FAIL) -# define H5F_SEEK(f, o) (lseek ((f), (off_t)(o), SEEK_SET)<0 ? \ - FAIL : SUCCEED) -# define H5F_SEEKEND(f) (lseek ((f), (off_t)0, SEEK_END)<0 ? \ - FAIL : SUCCEED) -# define H5F_TELL(f) lseek ((f), (off_t)0, SEEK_CUR) -# define H5F_OPENERR(f) ((f) < 0) -# define H5F_INVALID_FILE (-1) - - -#elif FILELIB == MACIO -typedef short hdf_file_t; -# define H5F_OPEN(x,y) mopen (x, y) -# define H5F_CREATE(name) mopen (name, H5ACC_CREATE) -# define H5F_CLOSE(x) mclose (x) -# define H5F_FLUSH(a) SUCCEED -# define H5F_READ(a,b,c) mread (a, (char*)b, (int32)c) -# define H5F_WRITE(a,b,c) mwrite (a, (char*)b, (int32)c) -# define H5F_SEEK(x,y) mlseek (x, (int32)y, 0) -# define H5F_SEEKEND(x) mlseek (x, 0L, 2) -# define H5F_TELL(x) mlseek (x, 0L, 1) -# define H5F_OPENERR(f) (f < 0) -# define H5F_INVALID_FILE (-1) - - -#elif FILELIB == WINNTIO -typedef HFILE hdf_file_t; -# define H5F_OPEN(p, a) (((a) & H5ACC_WRITE) ? \ - _lopen ((p), OF_READWRITE) : \ - _lopen ((p), OF_READ)) -# define H5F_CREATE(p) _lcreat ((p), 0) -# define H5F_READ(f, b, n) (((int32)(n) == _hread ((f), (b), (n))) ? \ - SUCCEED : FAIL) -# define H5F_WRITE(f, b, n) (((int32)(n) == _hwrite ((f), (b), (n))) ? \ - SUCCEED : FAIL) -# define H5F_CLOSE(f) (_lclose(f)==0 ? SUCCEED : FAIL) -# define H5F_FLUSH(f) 0 -# define H5F_SEEK(f, o) _llseek ((f), (long)(o), 0) -# define H5F_SEEKEND(f) _llseek ((f), (long)0, 2) -# define H5F_TELL(f) _llseek ((f), 0l, 1) -# define H5F_OPENERR(f) ((f) == (HFILE)HFILE_ERROR) -# define H5F_INVALID_FILE ((HFILE)HFILE_ERROR) - - -#elif FILELIB == PAGEBUFIO -# include "fmpio.h" -typedef MPFILE *hdf_file_t; -# define H5F_OPEN(p, a) MPopen ((p), (a)) -# define H5F_CREATE(p) MPopen ((p), H5ACC_CREATE) -# define H5F_CLOSE(f) MPclose (f) -# define H5F_FLUSH(f) MPflush (f) -# define H5F_READ(f, b, n) MPread ((f), (char *)(b), (n)) -# define H5F_WRITE(f, b, n) MPwrite ((f), (char *)(b), (n)) -# define H5F_SEEK(f, o) MPseek ((f), (off_t)(o), SEEK_SET) -# define H5F_SEEKEND(f) MPseek ((f), (off_t)0, SEEK_END) -# define H5F_TELL(f) MPseek ((f), (off_t)0, SEEK_CUR) -# define H5F_OPENERR(f) ((f) == (MPFILE *)NULL) -# define H5F_INVALID_FILE ((MPFILE *)NULL) - -#endif /* * Encode and decode macros for file meta-data. @@ -188,45 +84,30 @@ typedef MPFILE *hdf_file_t; *(p) = (uint8)(((i) >> 24) & 0xff); (p)++; \ } -# define INT64ENCODE(p, i) { \ - *(p) = (uint8)( (uint64)(i) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 8) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 16) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 24) & 0xff); (p)++; \ - if (sizeof(int64)>4) { \ - *(p) = (uint8)(((uint64)(i) >> 32) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 40) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 48) & 0xff); (p)++; \ - *(p) = (uint8)(((uint64)(i) >> 56) & 0xff); (p)++; \ - } else if ((i)<0) { \ - *(p)++ = 0xff; \ - *(p)++ = 0xff; \ - *(p)++ = 0xff; \ - *(p)++ = 0xff; \ - } else { \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ +# define INT64ENCODE(p, n) { \ + int64 _n = (n); \ + intn _i; \ + uint8 *_p = (uint8*)(p); \ + for (_i=0; _i<sizeof(int64); _i++, _n>>=8) { \ + *_p++ = _n & 0xff; \ } \ + for (/*void*/; _i<8; _i++) { \ + *_p++ = (n)<0 ? 0xff : 0; \ + } \ + (p) = (uint8*)(p)+8; \ } -# define UINT64ENCODE(p, i) { \ - *(p) = (uint8)( (i) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 8) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 16) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 24) & 0xff); (p)++; \ - if (sizeof(uint64)>4) { \ - *(p) = (uint8)(((i) >> 32) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 40) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 48) & 0xff); (p)++; \ - *(p) = (uint8)(((i) >> 56) & 0xff); (p)++; \ - } else { \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ - *(p)++ = 0x00; \ +# define UINT64ENCODE(p, n) { \ + uint64 _n = (n); \ + intn _i; \ + uint8 *_p = (uint8*)(p); \ + for (_i=0; _i<sizeof(uint64); _i++, _n>>=8) { \ + *_p++ = _n & 0xff; \ } \ + for (/*void*/; _i<8; _i++) { \ + *_p++ = 0; \ + } \ + (p) = (uint8*)(p)+8; \ } # define INT16DECODE(p, i) { \ @@ -253,34 +134,26 @@ typedef MPFILE *hdf_file_t; (i) |= ((uint32)(*(p) & 0xff) << 24); (p)++; \ } -# define INT64DECODE(p, i) { \ - (i) = ( *(p) & 0xff); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 8); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 16); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 24); (p)++; \ - if (sizeof(int64)>4) { \ - (i) |= ((int64)(*(p) & 0xff) << 32); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 40); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 48); (p)++; \ - (i) |= ((int64)(*(p) & 0xff) << 56); (p)++; \ - } else { \ - (p) += 4; \ +# define INT64DECODE(p, n) { \ + /* WE DON'T CHECK FOR OVERFLOW! */ \ + int64 _n = 0; \ + intn _i; \ + uint8 *_p = (uint8*)(p)+8; \ + for (_i=0; _i<sizeof(int64); _i++, _n<<=8) { \ + _n |= *(--_p); \ } \ + (p) = (uint8*)(p)+8; \ } -# define UINT64DECODE(p, i) { \ - (i) = (uint64)(*(p) & 0xff); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 8); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 16); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 24); (p)++; \ - if (sizeof(uint64)>4) { \ - (i) |= ((uint64)(*(p) & 0xff) << 32); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 40); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 48); (p)++; \ - (i) |= ((uint64)(*(p) & 0xff) << 56); (p)++; \ - } else { \ - (p) += 4; \ +# define UINT64DECODE(p, n) { \ + /* WE DON'T CHECK FOR OVERFLOW! */ \ + uint64 _n = 0; \ + intn _i; \ + uint8 *_p = (uint8*)(p)+8; \ + for (_i=0; _i<sizeof(uint64); _i++, _n<<=8) { \ + _n |= *(--_p); \ } \ + (p) = (uint8*)(p)+8; \ } #else @@ -352,27 +225,62 @@ typedef struct H5F_search_t { } H5F_search_t; /* For determining what the last file operation was */ -typedef enum - { - OP_UNKNOWN = 0, /* Don't know what the last operation was (after fopen frex) */ - OP_SEEK, /* Last operation was a seek */ - OP_WRITE, /* Last operation was a write */ - OP_READ /* Last operation was a read */ - } -H5F_fileop_t; +typedef enum { + H5F_OP_UNKNOWN, /* Don't know what the last operation was */ + H5F_OP_SEEK, /* Last operation was a seek */ + H5F_OP_WRITE, /* Last operation was a write */ + H5F_OP_READ /* Last operation was a read */ +} H5F_fileop_t; + +/* + * Define the low-level file interface. + */ +typedef struct H5F_low_class_t { + struct H5F_low_t *(*open)(const char*, uintn); + herr_t (*close)(struct H5F_low_t*); + herr_t (*read)(struct H5F_low_t*, haddr_t, size_t, uint8*); + herr_t (*write)(struct H5F_low_t*, haddr_t, size_t, const uint8*); + herr_t (*flush)(struct H5F_low_t*); + size_t (*size)(struct H5F_low_t*); +} H5F_low_class_t; + +typedef struct H5F_low_t { + const H5F_low_class_t *type; /* What type of file is this? */ + union { + + /* Posix section 2 I/O */ + struct { + int fd; /* The unix file descriptor */ + H5F_fileop_t op; /* Previous file operation */ + haddr_t cur; /* Current file position */ + } sec2; + + /* Posix stdio */ + struct { + FILE *f; /* Posix stdio file */ + H5F_fileop_t op; /* Previous file operation */ + haddr_t cur; /* Current file position */ + } stdio; + + } u; +} H5F_low_t; + +/* What types of low-level files are there? */ +#ifndef H5F_LOW_DFLT +# define H5F_LOW_DFLT H5F_LOW_STDIO /* The default type */ +#endif +extern const H5F_low_class_t H5F_LOW_SEC2[]; /* Posix section 2 */ +extern const H5F_low_class_t H5F_LOW_STDIO[]; /* Posix stdio */ + /* * Define the structure to store the file information for HDF5 files. One of * these structures is allocated per file, not per H5Fopen(). */ typedef struct H5F_file_t { - /* Seek caching info */ - haddr_t f_cur_off; /* Current location in the file */ - H5F_fileop_t last_op; /* the last file operation performed */ - H5F_search_t key; /* The key for looking up files */ uintn flags; /* Access Permissions for file */ - hdf_file_t file_handle; /* File handle for actual I/O */ + H5F_low_t *file_handle; /* Lower level file handle for I/O */ uintn nrefs; /* Ref count for times file is opened */ uint32 consist_flags; /* File Consistency Flags */ haddr_t smallobj_off; /* Offset of small-obj heap within the file */ @@ -452,16 +360,33 @@ struct H5O_istore_t; /*forward decl for prototype arguments*/ /* Private functions, not part of the publicly documented API */ void H5F_encode_length_unusual(const H5F_t *f, uint8 **p, uint8 *l); void H5F_encode_offset_unusual(const H5F_t *f, uint8 **p, uint8 *o); -H5F_t *H5F_open (const char *name, uintn flags, +H5F_t *H5F_open (const H5F_low_class_t *type, const char *name, uintn flags, const file_create_temp_t *create_parms); herr_t H5F_close (H5F_t *f); -herr_t H5F_block_read (H5F_t *f, haddr_t addr, size_t size, void *buf); -herr_t H5F_block_write (H5F_t *f, haddr_t addr, size_t size, void *buf); -herr_t H5F_istore_read (H5F_t *f, struct H5O_istore_t *mesg, - size_t offset[], size_t size[], void *buf); -herr_t H5F_istore_write (H5F_t *f, struct H5O_istore_t *mesg, - size_t offset[], size_t size[], void *buf); herr_t H5F_debug (H5F_t *f, haddr_t addr, FILE *stream, intn indent, intn fwidth); +/* Functions that operate on indexed storage */ +herr_t H5F_istore_new (H5F_t *f, struct H5O_istore_t *istore, + uintn ndims, const size_t alignment[]); +herr_t H5F_istore_read (H5F_t *f, const struct H5O_istore_t *mesg, + const size_t offset[], const size_t size[], + void *buf); +herr_t H5F_istore_write (H5F_t *f, const struct H5O_istore_t *mesg, + const size_t offset[], const size_t size[], + void *buf); + +/* Functions that operate on contiguous storage wrt boot block */ +herr_t H5F_block_read (H5F_t *f, haddr_t addr, size_t size, void *buf); +herr_t H5F_block_write (H5F_t *f, haddr_t addr, size_t size, void *buf); + +/* Functions that operate directly on low-level files */ +H5F_low_t *H5F_low_open (const H5F_low_class_t *type, const char *name, + uintn flags); +H5F_low_t *H5F_low_close (H5F_low_t *lf); +size_t H5F_low_size (H5F_low_t *lf); +herr_t H5F_low_read (H5F_low_t *lf, haddr_t addr, size_t size, uint8 *buf); +herr_t H5F_low_write (H5F_low_t *lf, haddr_t addr, size_t size, + const uint8 *buf); + #endif |