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-rw-r--r--src/H5Odtype.c76
1 files changed, 45 insertions, 31 deletions
diff --git a/src/H5Odtype.c b/src/H5Odtype.c
index 28970d1..805df2b 100644
--- a/src/H5Odtype.c
+++ b/src/H5Odtype.c
@@ -129,7 +129,7 @@ const H5O_msg_class_t H5O_MSG_DTYPE[1] = {{
*-------------------------------------------------------------------------
*/
static htri_t
-H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **pp, H5T_t *dt)
+H5O_dtype_decode_helper(unsigned *ioflags/*in,out*/, const uint8_t **pp, H5T_t *dt)
{
unsigned flags, version;
unsigned i;
@@ -145,7 +145,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
/* Version, class & flags */
UINT32DECODE(*pp, flags);
version = (flags>>4) & 0x0f;
- if(version < H5O_DTYPE_VERSION_1 || version > H5O_DTYPE_VERSION_3)
+ if(version < H5O_DTYPE_VERSION_1 || version > H5O_DTYPE_VERSION_LATEST)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTLOAD, FAIL, "bad version number for datatype message")
dt->shared->version = version;
dt->shared->type = (H5T_class_t)(flags & 0x0f);
@@ -250,7 +250,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
HDassert(0 == (z & 0x7)); /*must be aligned*/
if(NULL == (dt->shared->u.opaque.tag = (char *)H5MM_malloc(z + 1)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
- HDmemcpy(dt->shared->u.opaque.tag, *pp, z);
+ H5MM_memcpy(dt->shared->u.opaque.tag, *pp, z);
dt->shared->u.opaque.tag[z] = '\0';
*pp += z;
break;
@@ -331,7 +331,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
/* Decode the field's datatype information */
- if((can_upgrade = H5O_dtype_decode_helper(f, ioflags, pp, temp_type)) < 0) {
+ if((can_upgrade = H5O_dtype_decode_helper(ioflags, pp, temp_type)) < 0) {
for(j = 0; j <= i; j++)
H5MM_xfree(dt->shared->u.compnd.memb[j].name);
H5MM_xfree(dt->shared->u.compnd.memb);
@@ -438,16 +438,28 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
/* Set reference type */
dt->shared->u.atomic.u.r.rtype = (H5R_type_t)(flags & 0x0f);
-
- /* Set extra information for object references, so the hobj_ref_t gets swizzled correctly */
- if(dt->shared->u.atomic.u.r.rtype == H5R_OBJECT) {
- /* Mark location this type as undefined for now. The caller function should
- * decide the location. */
- dt->shared->u.atomic.u.r.loc = H5T_LOC_BADLOC;
-
- /* This type needs conversion */
- dt->shared->force_conv = TRUE;
- } /* end if */
+ if(dt->shared->u.atomic.u.r.rtype <= H5R_BADTYPE
+ || dt->shared->u.atomic.u.r.rtype >= H5R_MAXTYPE)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, FAIL, "invalid reference type");
+
+ /* Set generic flag */
+ if(dt->shared->u.atomic.u.r.rtype == H5R_OBJECT2
+ || dt->shared->u.atomic.u.r.rtype == H5R_DATASET_REGION2
+ || dt->shared->u.atomic.u.r.rtype == H5R_ATTR) {
+ dt->shared->u.atomic.u.r.opaque = TRUE;
+ dt->shared->u.atomic.u.r.version = (unsigned)((flags >> 4) & 0x0f);
+ if(dt->shared->u.atomic.u.r.version != H5R_ENCODE_VERSION)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, FAIL, "reference version does not match");
+ } else
+ dt->shared->u.atomic.u.r.opaque = FALSE;
+
+ /* This type needs conversion */
+ dt->shared->force_conv = TRUE;
+
+ /* Mark location of this type as undefined for now. The caller
+ * function should decide the location. */
+ if(H5T_set_loc(dt, NULL, H5T_LOC_BADLOC) < 0)
+ HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "invalid datatype location")
break;
case H5T_ENUM:
@@ -457,7 +469,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
dt->shared->u.enumer.nmembs = dt->shared->u.enumer.nalloc = flags & 0xffff;
if(NULL == (dt->shared->parent = H5T__alloc()))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "memory allocation failed")
- if(H5O_dtype_decode_helper(f, ioflags, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_decode_helper(ioflags, pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, FAIL, "unable to decode parent datatype")
/* Check if the parent of this enum has a version greater than the
@@ -483,7 +495,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
} /* end for */
/* Values */
- HDmemcpy(dt->shared->u.enumer.value, *pp,
+ H5MM_memcpy(dt->shared->u.enumer.value, *pp,
dt->shared->u.enumer.nmembs * dt->shared->parent->shared->size);
*pp += dt->shared->u.enumer.nmembs * dt->shared->parent->shared->size;
break;
@@ -499,7 +511,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
/* Decode base type of VL information */
if(NULL == (dt->shared->parent = H5T__alloc()))
HGOTO_ERROR(H5E_DATATYPE, H5E_NOSPACE, FAIL, "memory allocation failed")
- if(H5O_dtype_decode_helper(f, ioflags, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_decode_helper(ioflags, pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, FAIL, "unable to decode VL parent type")
/* Check if the parent of this vlen has a version greater than the
@@ -511,7 +523,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
/* Mark location this type as undefined for now. The caller function should
* decide the location. */
- if(H5T_set_loc(dt, f, H5T_LOC_BADLOC) < 0)
+ if(H5T_set_loc(dt, NULL, H5T_LOC_BADLOC) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTINIT, FAIL, "invalid datatype location")
break;
@@ -540,7 +552,7 @@ H5O_dtype_decode_helper(H5F_t *f, unsigned *ioflags/*in,out*/, const uint8_t **p
/* Decode base type of array */
if(NULL == (dt->shared->parent = H5T__alloc()))
HGOTO_ERROR(H5E_DATATYPE, H5E_NOSPACE, FAIL, "memory allocation failed")
- if(H5O_dtype_decode_helper(f, ioflags, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_decode_helper(ioflags, pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, FAIL, "unable to decode array parent type")
/* Check if the parent of this array has a version greater than the
@@ -596,7 +608,7 @@ done:
*-------------------------------------------------------------------------
*/
static herr_t
-H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
+H5O_dtype_encode_helper(uint8_t **pp, const H5T_t *dt)
{
unsigned flags = 0;
uint8_t *hdr = (uint8_t *)*pp;
@@ -882,7 +894,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
z = HDstrlen(dt->shared->u.opaque.tag);
aligned = (z + 7) & (H5T_OPAQUE_TAG_MAX - 8);
flags = (unsigned)(flags | aligned);
- HDmemcpy(*pp, dt->shared->u.opaque.tag, MIN(z,aligned));
+ H5MM_memcpy(*pp, dt->shared->u.opaque.tag, MIN(z,aligned));
for(n = MIN(z, aligned); n < aligned; n++)
(*pp)[n] = 0;
*pp += aligned;
@@ -956,7 +968,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
} /* end if */
/* Subtype */
- if(H5O_dtype_encode_helper(f, pp, dt->shared->u.compnd.memb[i].type) < 0)
+ if(H5O_dtype_encode_helper(pp, dt->shared->u.compnd.memb[i].type) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "unable to encode member type")
} /* end for */
}
@@ -964,6 +976,8 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
case H5T_REFERENCE:
flags |= (dt->shared->u.atomic.u.r.rtype & 0x0f);
+ if(dt->shared->u.atomic.u.r.opaque)
+ flags = (unsigned)(flags | (((unsigned)dt->shared->u.atomic.u.r.version & 0x0f) << 4));
break;
case H5T_ENUM:
@@ -976,7 +990,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
flags = dt->shared->u.enumer.nmembs & 0xffff;
/* Parent type */
- if(H5O_dtype_encode_helper(f, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_encode_helper(pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "unable to encode parent datatype")
/* Names, each a multiple of eight bytes */
@@ -997,7 +1011,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
} /* end for */
/* Values */
- HDmemcpy(*pp, dt->shared->u.enumer.value, dt->shared->u.enumer.nmembs * dt->shared->parent->shared->size);
+ H5MM_memcpy(*pp, dt->shared->u.enumer.value, dt->shared->u.enumer.nmembs * dt->shared->parent->shared->size);
*pp += dt->shared->u.enumer.nmembs * dt->shared->parent->shared->size;
break;
@@ -1012,7 +1026,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
} /* end if */
/* Encode base type of VL information */
- if(H5O_dtype_encode_helper(f, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_encode_helper(pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "unable to encode VL parent type")
break;
@@ -1050,7 +1064,7 @@ H5O_dtype_encode_helper(const H5F_t *f, uint8_t **pp, const H5T_t *dt)
} /* end if */
/* Encode base type of array's information */
- if(H5O_dtype_encode_helper(f, pp, dt->shared->parent) < 0)
+ if(H5O_dtype_encode_helper(pp, dt->shared->parent) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "unable to encode VL parent type")
break;
@@ -1091,7 +1105,7 @@ done:
function using malloc() and is returned to the caller.
--------------------------------------------------------------------------*/
static void *
-H5O_dtype_decode(H5F_t *f, H5O_t H5_ATTR_UNUSED *open_oh, unsigned H5_ATTR_UNUSED mesg_flags,
+H5O_dtype_decode(H5F_t H5_ATTR_UNUSED *f, H5O_t H5_ATTR_UNUSED *open_oh, unsigned H5_ATTR_UNUSED mesg_flags,
unsigned *ioflags/*in,out*/, size_t H5_ATTR_UNUSED p_size, const uint8_t *p)
{
H5T_t *dt = NULL;
@@ -1107,7 +1121,7 @@ H5O_dtype_decode(H5F_t *f, H5O_t H5_ATTR_UNUSED *open_oh, unsigned H5_ATTR_UNUSE
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
/* Perform actual decode of message */
- if(H5O_dtype_decode_helper(f, ioflags, &p, dt) < 0)
+ if(H5O_dtype_decode_helper(ioflags, &p, dt) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTDECODE, NULL, "can't decode type")
/* Set return value */
@@ -1136,7 +1150,7 @@ done:
message in the "raw" disk form.
--------------------------------------------------------------------------*/
static herr_t
-H5O_dtype_encode(H5F_t *f, uint8_t *p, const void *mesg)
+H5O_dtype_encode(H5F_t H5_ATTR_UNUSED *f, uint8_t *p, const void *mesg)
{
const H5T_t *dt = (const H5T_t *) mesg;
herr_t ret_value = SUCCEED; /* Return value */
@@ -1149,7 +1163,7 @@ H5O_dtype_encode(H5F_t *f, uint8_t *p, const void *mesg)
HDassert(dt);
/* encode */
- if(H5O_dtype_encode_helper(f, &p, dt) < 0)
+ if(H5O_dtype_encode_helper(&p, dt) < 0)
HGOTO_ERROR(H5E_DATATYPE, H5E_CANTENCODE, FAIL, "can't encode type")
done:
@@ -1765,7 +1779,7 @@ H5O__dtype_debug(H5F_t *f, const void *mesg, FILE *stream, int indent,
HDfprintf(stream, "%*s%-*s 0x", indent, "", fwidth,
"Raw bytes of value:");
for(k = 0; k < dt->shared->parent->shared->size; k++)
- HDfprintf(stream, "%02x", dt->shared->u.enumer.value[i*dt->shared->parent->shared->size + k]);
+ HDfprintf(stream, "%02x", (unsigned)*((uint8_t *)dt->shared->u.enumer.value + (i * dt->shared->parent->shared->size) + k));
HDfprintf(stream, "\n");
} /* end for */
} /* end else if */