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-rw-r--r--src/H5Olinfo.c237
1 files changed, 224 insertions, 13 deletions
diff --git a/src/H5Olinfo.c b/src/H5Olinfo.c
index 8017002..57a230f 100644
--- a/src/H5Olinfo.c
+++ b/src/H5Olinfo.c
@@ -25,23 +25,27 @@
*-------------------------------------------------------------------------
*/
+#define H5G_PACKAGE /*suppress error about including H5Gpkg */
#define H5O_PACKAGE /*suppress error about including H5Opkg */
#include "H5private.h" /* Generic Functions */
#include "H5Eprivate.h" /* Error handling */
#include "H5FLprivate.h" /* Free lists */
+#include "H5Gpkg.h" /* Groups */
#include "H5Opkg.h" /* Object headers */
-#ifdef H5_GROUP_REVISION
/* PRIVATE PROTOTYPES */
static void *H5O_linfo_decode(H5F_t *f, hid_t dxpl_id, const uint8_t *p);
static herr_t H5O_linfo_encode(H5F_t *f, uint8_t *p, const void *_mesg);
static void *H5O_linfo_copy(const void *_mesg, void *_dest, unsigned update_flags);
static size_t H5O_linfo_size(const H5F_t *f, const void *_mesg);
static herr_t H5O_linfo_free(void *_mesg);
+static herr_t H5O_linfo_delete(H5F_t *f, hid_t dxpl_id, const void *_mesg, hbool_t adj_link);
static void *H5O_linfo_copy_file(H5F_t *file_src, void *native_src,
H5F_t *file_dst, hid_t dxpl_id, H5O_copy_t *cpy_info, void *udata);
+static herr_t H5O_linfo_post_copy_file(const H5O_loc_t *parent_src_oloc, const void *mesg_src, H5O_loc_t *dst_oloc,
+ void *mesg_dst, hid_t dxpl_id, H5O_copy_t *cpy_info);
static herr_t H5O_linfo_debug(H5F_t *f, hid_t dxpl_id, const void *_mesg,
FILE * stream, int indent, int fwidth);
@@ -56,19 +60,28 @@ const H5O_msg_class_t H5O_MSG_LINFO[1] = {{
H5O_linfo_size, /*size of symbol table entry */
NULL, /*default reset method */
H5O_linfo_free, /* free method */
- NULL, /* file delete method */
+ H5O_linfo_delete, /* file delete method */
NULL, /* link method */
NULL, /*get share method */
NULL, /*set share method */
NULL, /* pre copy native value to file */
H5O_linfo_copy_file, /* copy native value to file */
- NULL, /* post copy native value to file */
+ H5O_linfo_post_copy_file, /* post copy native value to file */
H5O_linfo_debug /*debug the message */
}};
/* Current version of link info information */
#define H5O_LINFO_VERSION 1
+/* Data exchange structure to use when copying links from src to dst */
+typedef struct {
+ const H5O_loc_t *src_oloc; /* Source object location */
+ H5O_loc_t *dst_oloc; /* Destination object location */
+ H5O_linfo_t *dst_linfo; /* Destination object's link info message */
+ hid_t dxpl_id; /* DXPL for operation */
+ H5O_copy_t *cpy_info; /* Information for copy operation */
+} H5O_linfo_postcopy_ud_t;
+
/* Declare a free list to manage the hsize_t struct */
H5FL_DEFINE_STATIC(H5O_linfo_t);
@@ -111,9 +124,22 @@ H5O_linfo_decode(H5F_t *f, hid_t UNUSED dxpl_id, const uint8_t *p)
if (NULL == (linfo = H5FL_MALLOC(H5O_linfo_t)))
HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed")
- /* Get the number of links in the group */
+ /* Number of links in the group */
H5F_DECODE_LENGTH(f, p, linfo->nlinks)
+ /* Min. & max creation order value for the group */
+ INT64DECODE(p, linfo->min_corder)
+ INT64DECODE(p, linfo->max_corder)
+
+ /* Address of fractal heap to store "dense" links */
+ H5F_addr_decode(f, &p, &(linfo->link_fheap_addr));
+
+ /* Address of v2 B-tree to index names of links */
+ H5F_addr_decode(f, &p, &(linfo->name_bt2_addr));
+
+ /* Address of v2 B-tree to index creation order of links */
+ H5F_addr_decode(f, &p, &(linfo->corder_bt2_addr));
+
/* Set return value */
ret_value = linfo;
@@ -156,9 +182,22 @@ H5O_linfo_encode(H5F_t *f, uint8_t *p, const void *_mesg)
/* encode */
*p++ = H5O_LINFO_VERSION;
- /* Store the number of links in the group */
+ /* Number of links in the group */
H5F_ENCODE_LENGTH(f, p, linfo->nlinks)
+ /* Min. & max creation order value for the group */
+ INT64ENCODE(p, linfo->min_corder)
+ INT64ENCODE(p, linfo->max_corder)
+
+ /* Address of fractal heap to store "dense" links */
+ H5F_addr_encode(f, &p, linfo->link_fheap_addr);
+
+ /* Address of v2 B-tree to index names of links */
+ H5F_addr_encode(f, &p, linfo->name_bt2_addr);
+
+ /* Address of v2 B-tree to index creation order of links */
+ H5F_addr_encode(f, &p, linfo->corder_bt2_addr);
+
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_linfo_encode() */
@@ -199,7 +238,7 @@ H5O_linfo_copy(const void *_mesg, void *_dest, unsigned UNUSED update_flags)
*dest = *linfo;
/* Set return value */
- ret_value=dest;
+ ret_value = dest;
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -233,8 +272,13 @@ H5O_linfo_size(const H5F_t *f, const void UNUSED *_mesg)
FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_linfo_size)
/* Set return value */
- ret_value = 1 + /* Version */
- H5F_SIZEOF_SIZE(f); /* Number of links */
+ ret_value = 1 /* Version */
+ + H5F_SIZEOF_SIZE(f) /* Number of links */
+ + 8 /* Min. creation order value */
+ + 8 /* Max. creation order value */
+ + H5F_SIZEOF_ADDR(f) /* Address of fractal heap to store "dense" links */
+ + H5F_SIZEOF_ADDR(f) /* Address of v2 B-tree for indexing names of links */
+ + H5F_SIZEOF_ADDR(f); /* Address of v2 B-tree for indexing creation order values of links */
FUNC_LEAVE_NOAPI(ret_value)
} /* end H5O_linfo_size() */
@@ -268,6 +312,40 @@ H5O_linfo_free(void *mesg)
/*-------------------------------------------------------------------------
+ * Function: H5O_linfo_delete
+ *
+ * Purpose: Free file space referenced by message
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * Saturday, September 16, 2006
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5O_linfo_delete(H5F_t *f, hid_t dxpl_id, const void *_mesg, hbool_t adj_link)
+{
+ const H5O_linfo_t *linfo = (const H5O_linfo_t *)_mesg;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI_NOINIT(H5O_linfo_delete)
+
+ /* check args */
+ HDassert(f);
+ HDassert(linfo);
+
+ /* If the group is using "dense" link storage, delete it */
+ if(H5F_addr_defined(linfo->link_fheap_addr))
+ if(H5G_dense_delete(f, dxpl_id, (H5O_linfo_t *)linfo, adj_link) < 0) /* Casting away const OK - QAK */
+ HGOTO_ERROR(H5E_OHDR, H5E_CANTFREE, FAIL, "unable to free dense link storage")
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5O_linfo_delete() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5O_linfo_copy_file
*
* Purpose: Copies a message from _MESG to _DEST in file
@@ -282,8 +360,8 @@ H5O_linfo_free(void *mesg)
*-------------------------------------------------------------------------
*/
static void *
-H5O_linfo_copy_file(H5F_t UNUSED *file_src, void *native_src, H5F_t UNUSED *file_dst,
- hid_t UNUSED dxpl_id, H5O_copy_t *cpy_info, void UNUSED *udata)
+H5O_linfo_copy_file(H5F_t UNUSED *file_src, void *native_src, H5F_t *file_dst,
+ hid_t dxpl_id, H5O_copy_t *cpy_info, void UNUSED *udata)
{
H5O_linfo_t *linfo_src = (H5O_linfo_t *) native_src;
H5O_linfo_t *linfo_dst = NULL;
@@ -300,11 +378,26 @@ H5O_linfo_copy_file(H5F_t UNUSED *file_src, void *native_src, H5F_t UNUSED *file
HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, NULL, "memory allocation failed")
/* If we are performing a 'shallow hierarchy' copy, and the links in this
- * group won't be included in the destination, reset the link count for
+ * group won't be included in the destination, reset the link info for
* this group.
*/
- if(cpy_info->max_depth >= 0 && cpy_info->curr_depth >= cpy_info->max_depth)
+ if(cpy_info->max_depth >= 0 && cpy_info->curr_depth >= cpy_info->max_depth) {
linfo_dst->nlinks = 0;
+ linfo_dst->min_corder = linfo_dst->max_corder = 0;
+ linfo_dst->link_fheap_addr = HADDR_UNDEF;
+ linfo_dst->name_bt2_addr = HADDR_UNDEF;
+ linfo_dst->corder_bt2_addr = HADDR_UNDEF;
+ } /* end if */
+ else {
+ /* Create the components of the dense link storage for the destination group */
+ /* (XXX: should probably get the "creation" parameters for the source group's
+ * dense link storage components and use those - QAK)
+ */
+ if(H5F_addr_defined(linfo_src->link_fheap_addr)) {
+ if(H5G_dense_create(file_dst, dxpl_id, linfo_dst) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTINIT, NULL, "unable to create 'dense' form of new format group")
+ } /* end if */
+ } /* end else */
/* Set return value */
ret_value = linfo_dst;
@@ -319,6 +412,114 @@ done:
/*-------------------------------------------------------------------------
+ * Function: H5O_linfo_post_copy_file_cb
+ *
+ * Purpose: Callback routine for copying links from src to dst file
+ * during "post copy" routine
+ *
+ * Return: Success: Non-negative
+ * Failure: Negative
+ *
+ * Programmer: Quincey Koziol
+ * koziol@hdfgroup.org
+ * Sept 26 2006
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5O_linfo_post_copy_file_cb(const H5O_link_t *src_lnk, void *_udata)
+{
+ H5O_linfo_postcopy_ud_t *udata = (H5O_linfo_postcopy_ud_t *)_udata; /* 'User data' passed in */
+ H5O_link_t dst_lnk; /* Destination link to insert */
+ hbool_t dst_lnk_init = FALSE; /* Whether the destination link is initialized */
+ herr_t ret_value = H5B2_ITER_CONT; /* Return value */
+
+ FUNC_ENTER_NOAPI_NOINIT(H5O_linfo_post_copy_file_cb)
+
+ /* Check arguments */
+ HDassert(src_lnk);
+ HDassert(udata);
+
+ /* Copy the link (and the object it points to) */
+ if(H5G_link_copy_file(udata->dst_oloc->file, udata->dxpl_id, src_lnk,
+ udata->src_oloc, &dst_lnk, udata->cpy_info) < 0)
+ HGOTO_ERROR(H5E_OHDR, H5E_CANTCOPY, H5B2_ITER_ERROR, "unable to copy link")
+ dst_lnk_init = TRUE;
+
+ /* Insert the new object in the destination file's group */
+ /* (Doesn't increment the link count - that's already been taken care of for hard links) */
+ if(H5G_dense_insert(udata->dst_oloc->file, udata->dxpl_id, udata->dst_linfo, &dst_lnk) < 0)
+ HGOTO_ERROR(H5E_OHDR, H5E_CANTINSERT, H5B2_ITER_ERROR, "unable to insert destination link")
+
+done:
+ /* Check if the destination link has been initialized */
+ if(dst_lnk_init)
+ H5O_reset(H5O_LINK_ID, &dst_lnk);
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5O_linfo_post_copy_file_cb() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5O_linfo_post_copy_file
+ *
+ * Purpose: Finish copying a message from between files
+ *
+ * Return: Non-negative on success/Negative on failure
+ *
+ * Programmer: Quincey Koziol
+ * September 26, 2005
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5O_linfo_post_copy_file(const H5O_loc_t *src_oloc, const void *mesg_src,
+ H5O_loc_t *dst_oloc, void *mesg_dst, hid_t dxpl_id, H5O_copy_t *cpy_info)
+{
+ const H5O_linfo_t *linfo_src = (const H5O_linfo_t *)mesg_src;
+ H5O_linfo_t *linfo_dst = (H5O_linfo_t *)mesg_dst;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI_NOINIT(H5O_linfo_post_copy_file)
+
+ /* check args */
+ HDassert(src_oloc && src_oloc->file);
+ HDassert(linfo_src);
+ HDassert(dst_oloc && dst_oloc->file);
+ HDassert(H5F_addr_defined(dst_oloc->addr));
+ HDassert(linfo_dst);
+ HDassert(cpy_info);
+
+ /* If we are performing a 'shallow hierarchy' copy, get out now */
+ if(cpy_info->max_depth >= 0 && cpy_info->curr_depth >= cpy_info->max_depth)
+ HGOTO_DONE(SUCCEED)
+
+ /* Check for copying dense link storage */
+ if(H5F_addr_defined(linfo_src->link_fheap_addr)) {
+ H5O_linfo_postcopy_ud_t udata; /* User data for iteration callback */
+ H5G_link_iterate_t lnk_op; /* Link operator */
+
+ /* Set up dense link iteration user data */
+ udata.src_oloc = src_oloc;
+ udata.dst_oloc = dst_oloc;
+ udata.dst_linfo = linfo_dst;
+ udata.dxpl_id = dxpl_id;
+ udata.cpy_info = cpy_info;
+
+ /* Build iterator operator */
+ lnk_op.lib_op = H5O_linfo_post_copy_file_cb;
+
+ /* Iterate over the links in the group, building a table of the link messages */
+ if(H5G_dense_iterate(src_oloc->file, dxpl_id, H5_ITER_NATIVE, 0, linfo_src, TRUE, 0, NULL, lnk_op, &udata) < 0)
+ HGOTO_ERROR(H5E_SYM, H5E_CANTNEXT, FAIL, "error iterating over links")
+ } /* end if */
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* H5O_linfo_post_copy_file() */
+
+
+/*-------------------------------------------------------------------------
* Function: H5O_linfo_debug
*
* Purpose: Prints debugging info for a message.
@@ -350,8 +551,18 @@ H5O_linfo_debug(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, const void *_mesg, FILE *
HDfprintf(stream, "%*s%-*s %Hu\n", indent, "", fwidth,
"Number of links:", linfo->nlinks);
+ HDfprintf(stream, "%*s%-*s %Hd\n", indent, "", fwidth,
+ "Min. creation order value:", linfo->min_corder);
+ HDfprintf(stream, "%*s%-*s %Hd\n", indent, "", fwidth,
+ "Max. creation order value:", linfo->max_corder);
+ HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth,
+ "'Dense' link storage fractal heap address:", linfo->link_fheap_addr);
+ HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth,
+ "'Dense' link storage name index v2 B-tree address:", linfo->name_bt2_addr);
+ HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth,
+ "'Dense' link storage creation order index v2 B-tree address:", linfo->corder_bt2_addr);
+
FUNC_LEAVE_NOAPI(SUCCEED)
} /* end H5O_linfo_debug() */
-#endif /* H5_GROUP_REVISION */