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diff --git a/src/H5Rint.c b/src/H5Rint.c
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+++ b/src/H5Rint.c
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+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+/****************/
+/* Module Setup */
+/****************/
+
+#include "H5Rmodule.h" /* This source code file is part of the H5R module */
+
+
+/***********/
+/* Headers */
+/***********/
+#include "H5private.h" /* Generic Functions */
+#include "H5ACprivate.h" /* Metadata cache */
+#include "H5CXprivate.h" /* API Contexts */
+#include "H5Dprivate.h" /* Datasets */
+#include "H5Eprivate.h" /* Error handling */
+#include "H5Gprivate.h" /* Groups */
+#include "H5HGprivate.h" /* Global Heaps */
+#include "H5Iprivate.h" /* IDs */
+#include "H5MMprivate.h" /* Memory management */
+#include "H5Oprivate.h" /* Object headers */
+#include "H5Rpkg.h" /* References */
+#include "H5Sprivate.h" /* Dataspaces */
+#include "H5Tprivate.h" /* Datatypes */
+
+#include "H5VLnative_private.h" /* Native VOL connector */
+
+/****************/
+/* Local Macros */
+/****************/
+
+#define H5R_MAX_STRING_LEN (1 << 16) /* Max encoded string length */
+
+/* Encode macro */
+#define H5R_ENCODE(func, val, buf, buf_size, actual, m) do {\
+ size_t __nalloc = buf_size; \
+ if(func(val, buf, &__nalloc) < 0) \
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, m) \
+ if(buf && buf_size >= __nalloc) { \
+ buf += __nalloc; \
+ buf_size -= __nalloc; \
+ } \
+ actual += __nalloc; \
+} while(0)
+
+#define H5R_ENCODE_VAR(func, var, size, buf, buf_size, actual, m) do { \
+ size_t __nalloc = buf_size; \
+ if(func(var, size, buf, &__nalloc) < 0) \
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, m) \
+ if(buf && buf_size >= __nalloc) { \
+ p += __nalloc; \
+ buf_size -= __nalloc; \
+ } \
+ actual += __nalloc; \
+} while(0)
+
+/* Decode macro */
+#define H5R_DECODE(func, val, buf, buf_size, actual, m) do {\
+ size_t __nbytes = buf_size; \
+ if(func(buf, &__nbytes, val) < 0) \
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, m) \
+ buf += __nbytes; \
+ buf_size -= __nbytes; \
+ actual += __nbytes; \
+} while(0)
+
+#define H5R_DECODE_VAR(func, var, size, buf, buf_size, actual, m) do { \
+ size_t __nbytes = buf_size; \
+ if(func(buf, &__nbytes, var, size) < 0) \
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, m) \
+ p += __nbytes; \
+ buf_size -= __nbytes; \
+ actual += __nbytes; \
+} while(0)
+
+/* Debug */
+//#define H5R_DEBUG
+#ifdef H5R_DEBUG
+#define H5R_LOG_DEBUG(...) do { \
+ HDfprintf(stdout, " # %s(): ", __func__); \
+ HDfprintf(stdout, __VA_ARGS__); \
+ HDfprintf(stdout, "\n"); \
+ HDfflush(stdout); \
+ } while (0)
+static const char *
+H5R__print_token(const H5O_token_t token) {
+ static char string[64];
+
+ /* Print the raw token. */
+ HDsnprintf(string, 64, "%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X:%02X",
+ (unsigned char)token.__data[15],
+ (unsigned char)token.__data[14],
+ (unsigned char)token.__data[13],
+ (unsigned char)token.__data[12],
+ (unsigned char)token.__data[11],
+ (unsigned char)token.__data[10],
+ (unsigned char)token.__data[9],
+ (unsigned char)token.__data[8],
+ (unsigned char)token.__data[7],
+ (unsigned char)token.__data[6],
+ (unsigned char)token.__data[5],
+ (unsigned char)token.__data[4],
+ (unsigned char)token.__data[3],
+ (unsigned char)token.__data[2],
+ (unsigned char)token.__data[1],
+ (unsigned char)token.__data[0]
+ );
+
+ return string;
+}
+#else
+#define H5R_LOG_DEBUG(...) do { } while (0)
+#endif
+
+/******************/
+/* Local Typedefs */
+/******************/
+
+/********************/
+/* Local Prototypes */
+/********************/
+
+static herr_t H5R__encode_obj_token(const H5O_token_t *obj_token, size_t token_size, unsigned char *buf, size_t *nalloc);
+static herr_t H5R__decode_obj_token(const unsigned char *buf, size_t *nbytes, H5O_token_t *obj_token, uint8_t *token_size);
+static herr_t H5R__encode_region(H5S_t *space, unsigned char *buf, size_t *nalloc);
+static herr_t H5R__decode_region(const unsigned char *buf, size_t *nbytes, H5S_t **space_ptr);
+static herr_t H5R__encode_string(const char *string, unsigned char *buf, size_t *nalloc);
+static herr_t H5R__decode_string(const unsigned char *buf, size_t *nbytes, char **string_ptr);
+
+/*********************/
+/* Package Variables */
+/*********************/
+
+/* Package initialization variable */
+hbool_t H5_PKG_INIT_VAR = FALSE;
+
+/*****************************/
+/* Library Private Variables */
+/*****************************/
+
+/*******************/
+/* Local Variables */
+/*******************/
+
+/* Flag indicating "top" of interface has been initialized */
+static hbool_t H5R_top_package_initialize_s = FALSE;
+
+
+/*--------------------------------------------------------------------------
+NAME
+ H5R__init_package -- Initialize interface-specific information
+USAGE
+ herr_t H5R__init_package()
+
+RETURNS
+ Non-negative on success/Negative on failure
+DESCRIPTION
+ Initializes any interface-specific data or routines.
+
+--------------------------------------------------------------------------*/
+herr_t
+H5R__init_package(void)
+{
+ FUNC_ENTER_NOAPI_NOINIT_NOERR
+
+ /* Mark "top" of interface as initialized */
+ H5R_top_package_initialize_s = TRUE;
+
+ /* Sanity check, if assert fails, H5R_REF_BUF_SIZE must be increased */
+ HDcompile_assert(sizeof(H5R_ref_priv_t) <= H5R_REF_BUF_SIZE);
+
+ FUNC_LEAVE_NOAPI(SUCCEED)
+} /* end H5R__init_package() */
+
+
+/*--------------------------------------------------------------------------
+ NAME
+ H5R_top_term_package
+ PURPOSE
+ Terminate various H5R objects
+ USAGE
+ void H5R_top_term_package()
+ RETURNS
+ void
+ DESCRIPTION
+ Release IDs for the atom group, deferring full interface shutdown
+ until later (in H5R_term_package).
+ GLOBAL VARIABLES
+ COMMENTS, BUGS, ASSUMPTIONS
+ Can't report errors...
+ EXAMPLES
+ REVISION LOG
+--------------------------------------------------------------------------*/
+int
+H5R_top_term_package(void)
+{
+ int n = 0;
+
+ FUNC_ENTER_NOAPI_NOINIT_NOERR
+
+ /* Mark closed if initialized */
+ if(H5R_top_package_initialize_s)
+ if(0 == n)
+ H5R_top_package_initialize_s = FALSE;
+
+ FUNC_LEAVE_NOAPI(n)
+} /* end H5R_top_term_package() */
+
+
+/*--------------------------------------------------------------------------
+ NAME
+ H5R_term_package
+ PURPOSE
+ Terminate various H5R objects
+ USAGE
+ void H5R_term_package()
+ RETURNS
+ void
+ DESCRIPTION
+ Release the atom group and any other resources allocated.
+ GLOBAL VARIABLES
+ COMMENTS, BUGS, ASSUMPTIONS
+ Can't report errors...
+
+ Finishes shutting down the interface, after H5R_top_term_package()
+ is called
+ EXAMPLES
+ REVISION LOG
+--------------------------------------------------------------------------*/
+int
+H5R_term_package(void)
+{
+ int n = 0;
+
+ FUNC_ENTER_NOAPI_NOINIT_NOERR
+
+ if(H5_PKG_INIT_VAR) {
+ /* Sanity checks */
+ HDassert(FALSE == H5R_top_package_initialize_s);
+
+ /* Mark closed */
+ if(0 == n)
+ H5_PKG_INIT_VAR = FALSE;
+ }
+
+ FUNC_LEAVE_NOAPI(n)
+} /* end H5R_term_package() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__create_object
+ *
+ * Purpose: Creates an object reference
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__create_object(const H5O_token_t *obj_token, size_t token_size,
+ H5R_ref_priv_t *ref)
+{
+ size_t encode_size;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref);
+
+ /* Create new reference */
+ ref->info.obj.filename = NULL;
+ ref->loc_id = H5I_INVALID_HID;
+ ref->type = (uint8_t)H5R_OBJECT2;
+ if(H5R__set_obj_token(ref, obj_token, token_size) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, FAIL, "unable to set object token")
+
+ /* Cache encoding size (assume no external reference) */
+ if(H5R__encode(NULL, ref, NULL, &encode_size, 0) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, "unable to determine encoding size")
+ ref->encode_size = (uint32_t)encode_size;
+
+ H5R_LOG_DEBUG("Created object reference, %d, filename=%s, obj_addr=%s, encode size=%u",
+ (int)sizeof(H5R_ref_priv_t), ref->info.obj.filename, H5R__print_token(ref->info.obj.token),
+ ref->encode_size);
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__create_object() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__create_region
+ *
+ * Purpose: Creates a region reference
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__create_region(const H5O_token_t *obj_token, size_t token_size,
+ H5S_t *space, H5R_ref_priv_t *ref)
+{
+ size_t encode_size;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(space);
+ HDassert(ref);
+
+ /* Create new reference */
+ ref->info.obj.filename = NULL;
+ if(NULL == (ref->info.reg.space = H5S_copy(space, FALSE, TRUE)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "unable to copy dataspace")
+
+ ref->loc_id = H5I_INVALID_HID;
+ ref->type = (uint8_t)H5R_DATASET_REGION2;
+ if(H5R__set_obj_token(ref, obj_token, token_size) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, FAIL, "unable to set object token")
+
+ /* Cache encoding size (assume no external reference) */
+ if(H5R__encode(NULL, ref, NULL, &encode_size, 0) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, "unable to determine encoding size")
+ ref->encode_size = (uint32_t)encode_size;
+
+ H5R_LOG_DEBUG("Created region reference, %d, filename=%s, obj_addr=%s, encode size=%u",
+ (int)sizeof(H5R_ref_priv_t), ref->info.obj.filename, H5R__print_token(ref->info.obj.token),
+ ref->encode_size);
+
+done:
+ if(ret_value < 0)
+ if(ref->info.reg.space) {
+ H5S_close(ref->info.reg.space);
+ ref->info.reg.space = NULL;
+ } /* end if */
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* H5R__create_region */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__create_attr
+ *
+ * Purpose: Creates an attribute reference
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__create_attr(const H5O_token_t *obj_token, size_t token_size,
+ const char *attr_name, H5R_ref_priv_t *ref)
+{
+ size_t encode_size;
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(attr_name);
+ HDassert(ref);
+
+ /* Make sure that attribute name is not longer than supported encode size */
+ if(HDstrlen(attr_name) > H5R_MAX_STRING_LEN)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_ARGS, FAIL, "attribute name too long (%d > %d)", (int)HDstrlen(attr_name), H5R_MAX_STRING_LEN)
+
+ /* Create new reference */
+ ref->info.obj.filename = NULL;
+ if(NULL == (ref->info.attr.name = HDstrdup(attr_name)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "Cannot copy attribute name")
+
+ ref->loc_id = H5I_INVALID_HID;
+ ref->type = (uint8_t)H5R_ATTR;
+ if(H5R__set_obj_token(ref, obj_token, token_size) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, FAIL, "unable to set object token")
+
+ /* Cache encoding size (assume no external reference) */
+ if(H5R__encode(NULL, ref, NULL, &encode_size, 0) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, "unable to determine encoding size")
+ ref->encode_size = (uint32_t)encode_size;
+
+ H5R_LOG_DEBUG("Created attribute reference, %d, filename=%s, obj_addr=%s, attr name=%s, encode size=%u",
+ (int)sizeof(H5R_ref_priv_t), ref->info.obj.filename, H5R__print_token(ref->info.obj.token),
+ ref->info.attr.name, ref->encode_size);
+
+done:
+ if(ret_value < 0) {
+ H5MM_xfree(ref->info.attr.name);
+ ref->info.attr.name = NULL;
+ } /* end if */
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* H5R__create_attr */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__destroy
+ *
+ * Purpose: Destroy a reference
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__destroy(H5R_ref_priv_t *ref)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref != NULL);
+
+ H5MM_xfree(ref->info.obj.filename);
+ ref->info.obj.filename = NULL;
+
+ switch(ref->type) {
+ case H5R_OBJECT2:
+ break;
+
+ case H5R_DATASET_REGION2:
+ if(H5S_close(ref->info.reg.space) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTFREE, FAIL, "Cannot close dataspace")
+ ref->info.reg.space = NULL;
+ break;
+
+ case H5R_ATTR:
+ H5MM_xfree(ref->info.attr.name);
+ ref->info.attr.name = NULL;
+ break;
+
+ case H5R_OBJECT1:
+ case H5R_DATASET_REGION1:
+ break;
+ case H5R_BADTYPE:
+ case H5R_MAXTYPE:
+ HDassert("invalid reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (invalid reference type)")
+
+ default:
+ HDassert("unknown reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)")
+ } /* end switch */
+
+ /* Decrement refcount of attached loc_id */
+ if(ref->type && (ref->loc_id != H5I_INVALID_HID)) {
+ if(ref->app_ref) {
+ if(H5I_dec_app_ref(ref->loc_id) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDEC, FAIL, "decrementing location ID failed")
+ } else {
+ if(H5I_dec_ref(ref->loc_id) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDEC, FAIL, "decrementing location ID failed")
+ }
+ }
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__destroy() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__set_loc_id
+ *
+ * Purpose: Attach location ID to reference and increment location refcount.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__set_loc_id(H5R_ref_priv_t *ref, hid_t id, hbool_t inc_ref, hbool_t app_ref)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref != NULL);
+ HDassert(id != H5I_INVALID_HID);
+
+ /* If a location ID was previously assigned, decrement refcount and
+ * assign new one */
+ if((ref->loc_id != H5I_INVALID_HID)) {
+ if(ref->app_ref) {
+ if(H5I_dec_app_ref(ref->loc_id) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDEC, FAIL, "decrementing location ID failed")
+ } else {
+ if(H5I_dec_ref(ref->loc_id) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDEC, FAIL, "decrementing location ID failed")
+ }
+ }
+ ref->loc_id = id;
+
+ /* Prevent location ID from being freed until reference is destroyed,
+ * set app_ref if necessary as references are exposed to users and are
+ * expected to be destroyed, this allows the loc_id to be cleanly released
+ * on shutdown if users fail to call H5Rdestroy(). */
+ if(inc_ref && H5I_inc_ref(ref->loc_id, app_ref) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTINC, FAIL, "incrementing location ID failed")
+ ref->app_ref = app_ref;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__set_loc_id() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_loc_id
+ *
+ * Purpose: Retrieve location ID attached to existing reference.
+ *
+ * Return: Valid ID on success / H5I_INVALID_HID on failure
+ *
+ *-------------------------------------------------------------------------
+ */
+hid_t
+H5R__get_loc_id(const H5R_ref_priv_t *ref)
+{
+ hid_t ret_value = H5I_INVALID_HID; /* Return value */
+
+ FUNC_ENTER_PACKAGE_NOERR
+
+ HDassert(ref != NULL);
+
+ ret_value = ref->loc_id;
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_loc_id() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__reopen_file
+ *
+ * Purpose: Re-open referenced file using file access property list.
+ *
+ * Return: Valid ID on success / H5I_INVALID_HID on failure
+ *
+ *-------------------------------------------------------------------------
+ */
+hid_t
+H5R__reopen_file(H5R_ref_priv_t *ref, hid_t fapl_id)
+{
+ H5P_genplist_t *plist; /* Property list for FAPL */
+ void *new_file = NULL; /* File object opened */
+ H5VL_connector_prop_t connector_prop; /* Property for VOL connector ID & info */
+ H5VL_object_t *vol_obj = NULL; /* VOL object for file */
+ hbool_t supported; /* Whether 'post open' operation is supported by VOL connector */
+ hid_t ret_value = H5I_INVALID_HID;
+
+ FUNC_ENTER_PACKAGE
+
+ /* TODO add search path */
+
+ /* Verify access property list and set up collective metadata if appropriate */
+ if(H5CX_set_apl(&fapl_id, H5P_CLS_FACC, H5I_INVALID_HID, TRUE) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, H5I_INVALID_HID, "can't set access property list info")
+
+ /* Get the VOL info from the fapl */
+ if(NULL == (plist = (H5P_genplist_t *)H5I_object(fapl_id)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, H5I_INVALID_HID, "not a file access property list")
+ if(H5P_peek(plist, H5F_ACS_VOL_CONN_NAME, &connector_prop) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, H5I_INVALID_HID, "can't get VOL connector info")
+
+ /* Stash a copy of the "top-level" connector property, before any pass-through
+ * connectors modify or unwrap it.
+ */
+ if(H5CX_set_vol_connector_prop(&connector_prop) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, H5I_INVALID_HID, "can't set VOL connector info in API context")
+
+ /* Open the file */
+ /* (Must open file read-write to allow for object modifications) */
+ if(NULL == (new_file = H5VL_file_open(&connector_prop, H5R_REF_FILENAME(ref), H5F_ACC_RDWR, fapl_id, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTOPENFILE, H5I_INVALID_HID, "unable to open file")
+
+ /* Get an ID for the file */
+ if((ret_value = H5VL_register_using_vol_id(H5I_FILE, new_file, connector_prop.connector_id, TRUE)) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTREGISTER, H5I_INVALID_HID, "unable to atomize file handle")
+
+ /* Get the file object */
+ if(NULL == (vol_obj = H5VL_vol_object(ret_value)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, H5I_INVALID_HID, "invalid object identifier")
+
+ /* Make the 'post open' callback */
+ supported = FALSE;
+ if(H5VL_introspect_opt_query(vol_obj, H5VL_SUBCLS_FILE, H5VL_NATIVE_FILE_POST_OPEN, &supported) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, H5I_INVALID_HID, "can't check for 'post open' operation")
+ if(supported)
+ if(H5VL_file_optional(vol_obj, H5VL_NATIVE_FILE_POST_OPEN, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTINIT, H5I_INVALID_HID, "unable to make file 'post open' callback")
+
+ /* Attach loc_id to reference */
+ if(H5R__set_loc_id((H5R_ref_priv_t *)ref, ret_value, FALSE, TRUE) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, H5I_INVALID_HID, "unable to attach location id to reference")
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__reopen_file() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_type
+ *
+ * Purpose: Given a reference to some object, return the type of that
+ * reference.
+ *
+ * Return: Type of the reference
+ *
+ *-------------------------------------------------------------------------
+ */
+H5R_type_t
+H5R__get_type(const H5R_ref_priv_t *ref)
+{
+ H5R_type_t ret_value = H5R_BADTYPE;
+
+ FUNC_ENTER_PACKAGE_NOERR
+
+ HDassert(ref != NULL);
+ ret_value = (H5R_type_t)ref->type;
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_type() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__equal
+ *
+ * Purpose: Compare two references
+ *
+ * Return: TRUE if equal, FALSE if unequal, FAIL if error
+ *
+ *-------------------------------------------------------------------------
+ */
+htri_t
+H5R__equal(const H5R_ref_priv_t *ref1, const H5R_ref_priv_t *ref2)
+{
+ htri_t ret_value = TRUE;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref1 != NULL);
+ HDassert(ref2 != NULL);
+
+ /* Compare reference types */
+ if(ref1->type != ref2->type)
+ HGOTO_DONE(FALSE);
+
+ /* Compare object addresses */
+ if(ref1->token_size != ref2->token_size)
+ HGOTO_DONE(FALSE);
+ if(0 != HDmemcmp(&ref1->info.obj.token, &ref2->info.obj.token, ref1->token_size))
+ HGOTO_DONE(FALSE);
+
+ /* Compare filenames */
+ if((ref1->info.obj.filename && (NULL == ref2->info.obj.filename))
+ || ((NULL == ref1->info.obj.filename) && ref2->info.obj.filename))
+ HGOTO_DONE(FALSE);
+ if(ref1->info.obj.filename && ref1->info.obj.filename
+ && (0 != HDstrcmp(ref1->info.obj.filename, ref2->info.obj.filename)))
+ HGOTO_DONE(FALSE);
+
+ switch(ref1->type) {
+ case H5R_OBJECT2:
+ break;
+ case H5R_DATASET_REGION2:
+ if((ret_value = H5S_extent_equal(ref1->info.reg.space, ref2->info.reg.space)) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOMPARE, FAIL, "cannot compare dataspace extents")
+ break;
+ case H5R_ATTR:
+ HDassert(ref1->info.attr.name && ref2->info.attr.name);
+ if(0 != HDstrcmp(ref1->info.attr.name, ref2->info.attr.name))
+ HGOTO_DONE(FALSE);
+ break;
+ case H5R_OBJECT1:
+ case H5R_DATASET_REGION1:
+ case H5R_BADTYPE:
+ case H5R_MAXTYPE:
+ HDassert("invalid reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (invalid reference type)")
+ default:
+ HDassert("unknown reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)")
+ } /* end switch */
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__equal() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__copy
+ *
+ * Purpose: Copy a reference
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__copy(const H5R_ref_priv_t *src_ref, H5R_ref_priv_t *dst_ref)
+{
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert((src_ref != NULL) && (dst_ref != NULL));
+
+ H5MM_memcpy(&dst_ref->info.obj.token, &src_ref->info.obj.token, sizeof(H5O_token_t));
+ dst_ref->encode_size = src_ref->encode_size;
+ dst_ref->type = src_ref->type;
+ dst_ref->token_size = src_ref->token_size;
+
+ switch(src_ref->type) {
+ case H5R_OBJECT2:
+ break;
+ case H5R_DATASET_REGION2:
+ if(NULL == (dst_ref->info.reg.space = H5S_copy(src_ref->info.reg.space, FALSE, TRUE)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "unable to copy dataspace")
+ break;
+ case H5R_ATTR:
+ if(NULL == (dst_ref->info.attr.name = HDstrdup(src_ref->info.attr.name)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "Cannot copy attribute name")
+ break;
+ case H5R_OBJECT1:
+ case H5R_DATASET_REGION1:
+ HDassert("invalid reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (invalid reference type)")
+ case H5R_BADTYPE:
+ case H5R_MAXTYPE:
+ default:
+ HDassert("unknown reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)")
+ } /* end switch */
+
+ /* We only need to keep a copy of the filename if we don't have the loc_id */
+ if(src_ref->loc_id == H5I_INVALID_HID) {
+ HDassert(src_ref->info.obj.filename);
+
+ if(NULL == (dst_ref->info.obj.filename = HDstrdup(src_ref->info.obj.filename)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "Cannot copy filename")
+ dst_ref->loc_id = H5I_INVALID_HID;
+ }
+ else {
+ dst_ref->info.obj.filename = NULL;
+
+ /* Set location ID and hold reference to it */
+ if(H5R__set_loc_id(dst_ref, src_ref->loc_id, TRUE, TRUE) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, FAIL, "cannot set reference location ID")
+ }
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__copy() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_obj_token
+ *
+ * Purpose: Given a reference to some object, get the encoded token.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__get_obj_token(const H5R_ref_priv_t *ref, H5O_token_t *obj_token,
+ size_t *token_size)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref != NULL);
+ HDassert(ref->token_size <= H5O_MAX_TOKEN_SIZE);
+
+ if(obj_token) {
+ if(0 == ref->token_size)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "NULL token size")
+ H5MM_memcpy(obj_token, &ref->info.obj.token, sizeof(H5O_token_t));
+ }
+ if(token_size)
+ *token_size = ref->token_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_obj_token() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__set_obj_token
+ *
+ * Purpose: Given a reference to some object, set the encoded token.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__set_obj_token(H5R_ref_priv_t *ref, const H5O_token_t *obj_token,
+ size_t token_size)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE_NOERR
+
+ HDassert(ref != NULL);
+ HDassert(obj_token);
+ HDassert(token_size);
+ HDassert(token_size <= H5O_MAX_TOKEN_SIZE);
+
+ H5MM_memcpy(&ref->info.obj.token, obj_token, sizeof(H5O_token_t));
+ HDassert(token_size <= 255);
+ ref->token_size = (uint8_t)token_size;
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__set_obj_token() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_region
+ *
+ * Purpose: Given a reference to some object, creates a copy of the
+ * dataset pointed to's dataspace and defines a selection in
+ * the copy which is the region pointed to.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__get_region(const H5R_ref_priv_t *ref, H5S_t *space)
+{
+ herr_t ret_value = SUCCEED; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref != NULL);
+ HDassert(ref->type == H5R_DATASET_REGION2);
+ HDassert(space);
+
+ /* Copy reference selection to destination */
+ if(H5S_select_copy(space, ref->info.reg.space, FALSE) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "unable to copy selection")
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_region() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_file_name
+ *
+ * Purpose: Given a reference to some object, determine a file name of
+ * the object located into.
+ *
+ * Return: Non-negative length of the path on success / -1 on failure
+ *
+ *-------------------------------------------------------------------------
+ */
+ssize_t
+H5R__get_file_name(const H5R_ref_priv_t *ref, char *buf, size_t size)
+{
+ size_t copy_len;
+ ssize_t ret_value = -1; /* Return value */
+
+ FUNC_ENTER_PACKAGE
+
+ /* Check args */
+ HDassert(ref != NULL);
+
+ /* Return if that reference has no filename set */
+ if(!ref->info.obj.filename)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_ARGS, (-1), "no filename available for that reference")
+
+ /* Get the file name length */
+ copy_len = HDstrlen(ref->info.obj.filename);
+ HDassert(copy_len <= H5R_MAX_STRING_LEN);
+
+ /* Copy the file name */
+ if(buf) {
+ copy_len = MIN(copy_len, size - 1);
+ H5MM_memcpy(buf, ref->info.obj.filename, copy_len);
+ buf[copy_len] = '\0';
+ }
+ ret_value = (ssize_t)(copy_len + 1);
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_file_name() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__get_attr_name
+ *
+ * Purpose: Given a reference to some attribute, determine its name.
+ *
+ * Return: Non-negative length of the path on success / -1 on failure
+ *
+ *-------------------------------------------------------------------------
+ */
+ssize_t
+H5R__get_attr_name(const H5R_ref_priv_t *ref, char *buf, size_t size)
+{
+ ssize_t ret_value = -1; /* Return value */
+ size_t attr_name_len; /* Length of the attribute name */
+
+ FUNC_ENTER_PACKAGE_NOERR
+
+ /* Check args */
+ HDassert(ref != NULL);
+ HDassert(ref->type == H5R_ATTR);
+
+ /* Get the attribute name length */
+ attr_name_len = HDstrlen(ref->info.attr.name);
+ HDassert(attr_name_len <= H5R_MAX_STRING_LEN);
+
+ /* Get the attribute name */
+ if(buf) {
+ size_t copy_len = MIN(attr_name_len, size - 1);
+ H5MM_memcpy(buf, ref->info.attr.name, copy_len);
+ buf[copy_len] = '\0';
+ }
+
+ ret_value = (ssize_t)(attr_name_len + 1);
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__get_attr_name() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode
+ *
+ * Purpose: Private function for H5Rencode
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__encode(const char *filename, const H5R_ref_priv_t *ref, unsigned char *buf,
+ size_t *nalloc, unsigned flags)
+{
+ uint8_t *p = (uint8_t *)buf;
+ size_t buf_size = 0, encode_size = 0;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(ref);
+ HDassert(nalloc);
+
+ /**
+ * Encoding format:
+ * | Reference type (8 bits) | Flags (8 bits) | Token (token size)
+ * | |
+ * | |----> H5R_IS_EXTERNAL: File info
+ * |
+ * |----> H5R_DATASET_REGION2: Serialized selection
+ * |
+ * |----> H5R_ATTR: Attribute name len + name
+ *
+ */
+
+ /* Don't encode if buffer size isn't big enough or buffer is empty */
+ if(buf && *nalloc >= H5R_ENCODE_HEADER_SIZE) {
+ /* Encode the type of the reference */
+ *p++ = (uint8_t)ref->type;
+
+ /* Encode the flags */
+ *p++ = (uint8_t)flags;
+
+ buf_size = *nalloc - H5R_ENCODE_HEADER_SIZE;
+ } /* end if */
+ encode_size += H5R_ENCODE_HEADER_SIZE;
+
+ /* Encode object token */
+ H5R_ENCODE_VAR(H5R__encode_obj_token, &ref->info.obj.token, ref->token_size,
+ p, buf_size, encode_size, "Cannot encode object address");
+
+ /**
+ * TODO Encode VOL info
+ * When we have a better way of storing blobs, we should add
+ * support for referencing files in external VOLs.
+ * There are currently multiple limitations:
+ * - avoid duplicating VOL info on each reference
+ * - must query terminal VOL connector to avoid passthrough confusion
+ */
+ if(flags & H5R_IS_EXTERNAL)
+ /* Encode file name */
+ H5R_ENCODE(H5R__encode_string, filename, p, buf_size, encode_size,
+ "Cannot encode filename");
+
+ switch(ref->type) {
+ case H5R_OBJECT2:
+ break;
+
+ case H5R_DATASET_REGION2:
+ /* Encode dataspace */
+ H5R_ENCODE(H5R__encode_region, ref->info.reg.space, p, buf_size,
+ encode_size, "Cannot encode region");
+ break;
+
+ case H5R_ATTR:
+ /* Encode attribute name */
+ H5R_ENCODE(H5R__encode_string, ref->info.attr.name, p, buf_size,
+ encode_size, "Cannot encode attribute name");
+ break;
+
+ case H5R_OBJECT1:
+ case H5R_DATASET_REGION1:
+ case H5R_BADTYPE:
+ case H5R_MAXTYPE:
+ HDassert("invalid reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (invalid reference type)")
+
+ default:
+ HDassert("unknown reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)")
+ } /* end switch */
+
+ *nalloc = encode_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode
+ *
+ * Purpose: Private function for H5Rdecode
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__decode(const unsigned char *buf, size_t *nbytes, H5R_ref_priv_t *ref)
+{
+ const uint8_t *p = (const uint8_t *)buf;
+ size_t buf_size = 0, decode_size = 0;
+ uint8_t flags;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(ref);
+ buf_size = *nbytes;
+
+ /* Don't decode if buffer size isn't big enough */
+ if(buf_size < H5R_ENCODE_HEADER_SIZE)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Set new reference */
+ ref->type = (int8_t)*p++;
+ if(ref->type <= H5R_BADTYPE || ref->type >= H5R_MAXTYPE)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid reference type")
+
+ /* Set flags */
+ flags = *p++;
+
+ buf_size -= H5R_ENCODE_HEADER_SIZE;
+ decode_size += H5R_ENCODE_HEADER_SIZE;
+
+ /* Decode object token */
+ H5R_DECODE_VAR(H5R__decode_obj_token, &ref->info.obj.token, &ref->token_size,
+ p, buf_size, decode_size, "Cannot decode object address");
+
+ /* We do not need to store the filename if the reference is internal */
+ if(flags & H5R_IS_EXTERNAL) {
+ /* Decode file name */
+ H5R_DECODE(H5R__decode_string, &ref->info.obj.filename, p, buf_size,
+ decode_size, "Cannot decode filename");
+ }
+ else
+ ref->info.obj.filename = NULL;
+
+ switch(ref->type) {
+ case H5R_OBJECT2:
+ break;
+ case H5R_DATASET_REGION2:
+ /* Decode dataspace */
+ H5R_DECODE(H5R__decode_region, &ref->info.reg.space, p, buf_size,
+ decode_size, "Cannot decode region");
+ break;
+ case H5R_ATTR:
+ /* Decode attribute name */
+ H5R_DECODE(H5R__decode_string, &ref->info.attr.name, p, buf_size,
+ decode_size, "Cannot decode attribute name");
+ break;
+ case H5R_OBJECT1:
+ case H5R_DATASET_REGION1:
+ case H5R_BADTYPE:
+ case H5R_MAXTYPE:
+ HDassert("invalid reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (invalid reference type)")
+ default:
+ HDassert("unknown reference type" && 0);
+ HGOTO_ERROR(H5E_REFERENCE, H5E_UNSUPPORTED, FAIL, "internal error (unknown reference type)")
+ } /* end switch */
+
+ /* Set loc ID to invalid */
+ ref->loc_id = H5I_INVALID_HID;
+
+ /* Set encoding size */
+ ref->encode_size = (uint32_t)decode_size;
+
+ H5R_LOG_DEBUG("Decoded reference, filename=%s, obj_addr=%s, encode size=%u",
+ ref->info.obj.filename, H5R__print_token(ref->info.obj.token),
+ ref->encode_size);
+
+ *nbytes = decode_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_obj_token
+ *
+ * Purpose: Encode an object address.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__encode_obj_token(const H5O_token_t *obj_token, size_t token_size,
+ unsigned char *buf, size_t *nalloc)
+{
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC_NOERR
+
+ HDassert(nalloc);
+
+ /* Don't encode if buffer size isn't big enough or buffer is empty */
+ if(buf && *nalloc >= token_size) {
+ uint8_t *p = (uint8_t *)buf;
+
+ /* Encode token size */
+ *p++ = (uint8_t)(token_size & 0xff);
+
+ /* Encode token */
+ H5MM_memcpy(p, obj_token, token_size);
+ }
+ *nalloc = token_size + H5_SIZEOF_UINT8_T;
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode_obj_token() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_obj_token
+ *
+ * Purpose: Decode an object address.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__decode_obj_token(const unsigned char *buf, size_t *nbytes,
+ H5O_token_t *obj_token, uint8_t *token_size)
+{
+ const uint8_t *p = (const uint8_t *)buf;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC
+
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(obj_token);
+ HDassert(token_size);
+
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < H5_SIZEOF_UINT8_T)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Get token size */
+ *token_size = *p++;
+ if(*token_size > sizeof(H5O_token_t))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Invalid token size (%u)", *token_size)
+
+ /* Make sure that token is initialized */
+ HDmemset(obj_token, 0, sizeof(H5O_token_t));
+
+ /* Decode token */
+ H5MM_memcpy(obj_token, p, *token_size);
+
+ *nbytes = (size_t)(*token_size + H5_SIZEOF_UINT8_T);
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_obj_token() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_region
+ *
+ * Purpose: Encode a selection.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__encode_region(H5S_t *space, unsigned char *buf, size_t *nalloc)
+{
+ uint8_t *p = NULL; /* Pointer to data to store */
+ hssize_t buf_size = 0;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC
+
+ HDassert(space);
+ HDassert(nalloc);
+
+ /* Get the amount of space required to serialize the selection */
+ if((buf_size = H5S_SELECT_SERIAL_SIZE(space)) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, "Cannot determine amount of space needed for serializing selection")
+
+ /* Don't encode if buffer size isn't big enough or buffer is empty */
+ if(buf && *nalloc >= ((size_t)buf_size + 2 * H5_SIZEOF_UINT32_T)) {
+ int rank;
+ p = (uint8_t *)buf;
+
+ /* Encode the size for safety check */
+ UINT32ENCODE(p, (uint32_t)buf_size);
+
+ /* Encode the extent rank */
+ if((rank = H5S_get_simple_extent_ndims(space)) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, FAIL, "can't get extent rank for selection")
+ UINT32ENCODE(p, (uint32_t)rank);
+
+ /* Serialize the selection */
+ if(H5S_SELECT_SERIALIZE(space, (unsigned char **)&p) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTENCODE, FAIL, "can't serialize selection")
+ } /* end if */
+ *nalloc = (size_t)buf_size + 2 * H5_SIZEOF_UINT32_T;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode_region() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_region
+ *
+ * Purpose: Decode a selection.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__decode_region(const unsigned char *buf, size_t *nbytes, H5S_t **space_ptr)
+{
+ const uint8_t *p = (const uint8_t *)buf;
+ size_t buf_size = 0;
+ unsigned rank;
+ H5S_t *space;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC
+
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(space_ptr);
+
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < (2 * H5_SIZEOF_UINT32_T))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Decode the selection size */
+ UINT32DECODE(p, buf_size);
+ buf_size += H5_SIZEOF_UINT32_T;
+
+ /* Decode the extent rank */
+ UINT32DECODE(p, rank);
+ buf_size += H5_SIZEOF_UINT32_T;
+
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < buf_size)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Deserialize the selection (dataspaces need the extent rank information) */
+ if(NULL == (space = H5S_create(H5S_SIMPLE)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+ if(H5S_set_extent_simple(space, rank, NULL, NULL) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTSET, FAIL, "can't set extent rank for selection")
+ if(H5S_SELECT_DESERIALIZE(&space, &p) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "can't deserialize selection")
+
+ *nbytes = buf_size;
+ *space_ptr = space;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_region() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_string
+ *
+ * Purpose: Encode a string.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__encode_string(const char *string, unsigned char *buf, size_t *nalloc)
+{
+ size_t string_len, buf_size;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC
+
+ HDassert(string);
+ HDassert(nalloc);
+
+ /* Get the amount of space required to serialize the string */
+ string_len = HDstrlen(string);
+ if(string_len > H5R_MAX_STRING_LEN)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_ARGS, FAIL, "string too long")
+
+ /* Compute buffer size, allow for the attribute name length and object address */
+ buf_size = string_len + sizeof(uint16_t);
+
+ if(buf && *nalloc >= buf_size) {
+ uint8_t *p = (uint8_t *)buf;
+ /* Serialize information for string length into the buffer */
+ UINT16ENCODE(p, string_len);
+ /* Copy the string into the buffer */
+ H5MM_memcpy(p, string, string_len);
+ }
+ *nalloc = buf_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode_string() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_string
+ *
+ * Purpose: Decode a string.
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+static herr_t
+H5R__decode_string(const unsigned char *buf, size_t *nbytes, char **string_ptr)
+{
+ const uint8_t *p = (const uint8_t *)buf;
+ size_t string_len;
+ char *string = NULL;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_STATIC
+
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(string_ptr);
+
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < sizeof(uint16_t))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Get the string length */
+ UINT16DECODE(p, string_len);
+ HDassert(string_len <= H5R_MAX_STRING_LEN);
+
+ /* Allocate the string */
+ if(NULL == (string = (char *)H5MM_malloc(string_len + 1)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTALLOC, FAIL, "Cannot allocate string")
+
+ /* Copy the string */
+ H5MM_memcpy(string, p, string_len);
+ string[string_len] = '\0';
+
+ *string_ptr = string;
+ *nbytes = sizeof(uint16_t) + string_len;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_string() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_heap
+ *
+ * Purpose: Encode data and insert into heap (native only).
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__encode_heap(H5F_t *f, unsigned char *buf, size_t *nalloc,
+ const unsigned char *data, size_t data_size)
+{
+ size_t buf_size;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(f);
+ HDassert(nalloc);
+
+ buf_size = H5HG_HEAP_ID_SIZE(f);
+ if(buf && *nalloc >= buf_size) {
+ H5HG_t hobjid;
+ uint8_t *p = (uint8_t *)buf;
+
+ /* Write the reference information to disk (allocates space also) */
+ if(H5HG_insert(f, data_size, data, &hobjid) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_WRITEERROR, FAIL, "Unable to write reference information")
+
+ /* Encode the heap information */
+ H5F_addr_encode(f, &p, hobjid.addr);
+ UINT32ENCODE(p, hobjid.idx);
+ } /* end if */
+ *nalloc = buf_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode_heap() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_heap
+ *
+ * Purpose: Decode data inserted into heap (native only).
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__decode_heap(H5F_t *f, const unsigned char *buf, size_t *nbytes,
+ unsigned char **data_ptr, size_t *data_size)
+{
+ const uint8_t *p = (const uint8_t *)buf;
+ H5HG_t hobjid;
+ size_t buf_size;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(f);
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(data_ptr);
+
+ buf_size = H5HG_HEAP_ID_SIZE(f);
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < buf_size)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Get the heap information */
+ H5F_addr_decode(f, &p, &(hobjid.addr));
+ if(!H5F_addr_defined(hobjid.addr) || hobjid.addr == 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Undefined reference pointer")
+ UINT32DECODE(p, hobjid.idx);
+
+ /* Read the information from disk */
+ if(NULL == (*data_ptr = (unsigned char *)H5HG_read(f, &hobjid, (void *)*data_ptr, data_size)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_READERROR, FAIL, "Unable to read reference data")
+
+ *nbytes = buf_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_heap() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__free_heap
+ *
+ * Purpose: Remove data previously inserted into heap (native only).
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__free_heap(H5F_t *f, const unsigned char *buf, size_t nbytes)
+{
+ H5HG_t hobjid;
+ const uint8_t *p = (const uint8_t *)buf;
+ size_t buf_size;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(f);
+ HDassert(buf);
+
+ buf_size = H5HG_HEAP_ID_SIZE(f);
+ /* Don't decode if buffer size isn't big enough */
+ if(nbytes < buf_size)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ /* Get the heap information */
+ H5F_addr_decode(f, &p, &(hobjid.addr));
+ if(!H5F_addr_defined(hobjid.addr) || hobjid.addr == 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "Undefined reference pointer")
+ UINT32DECODE(p, hobjid.idx);
+
+ /* Free heap object */
+ if(hobjid.addr > 0) {
+ /* Free heap object */
+ if(H5HG_remove(f, &hobjid) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_WRITEERROR, FAIL, "Unable to remove heap object")
+ } /* end if */
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__free_heap() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_token_compat
+ *
+ * Purpose: Decode an object token. (native only)
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__decode_token_compat(H5VL_object_t *vol_obj, H5I_type_t type, H5R_type_t ref_type,
+ const unsigned char *buf, H5O_token_t *obj_token)
+{
+ hid_t file_id = H5I_INVALID_HID; /* File ID for region reference */
+ H5VL_object_t *vol_obj_file = NULL;
+ H5VL_file_cont_info_t cont_info = {H5VL_CONTAINER_INFO_VERSION, 0, 0, 0};
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+#ifndef NDEBUG
+ {
+ hbool_t is_native = FALSE; /* Whether the src file is using the native VOL connector */
+
+ /* Check if using native VOL connector */
+ if(H5VL_object_is_native(vol_obj, &is_native) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, FAIL, "can't query if file uses native VOL connector")
+
+ /* Must use native VOL connector for this operation */
+ HDassert(is_native);
+ }
+#endif /* NDEBUG */
+
+ /* Get the file for the object */
+ if((file_id = H5F_get_file_id(vol_obj, type, FALSE)) < 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file or file object")
+
+ /* Retrieve VOL object */
+ if(NULL == (vol_obj_file = H5VL_vol_object(file_id)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier")
+
+ /* Get container info */
+ if(H5VL_file_get((const H5VL_object_t *)vol_obj_file, H5VL_FILE_GET_CONT_INFO, H5P_DATASET_XFER_DEFAULT, H5_REQUEST_NULL, &cont_info) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTGET, FAIL, "unable to get container info")
+
+ if(ref_type == H5R_OBJECT1) {
+ size_t buf_size = H5R_OBJ_REF_BUF_SIZE;
+
+ /* Get object address */
+ if(H5R__decode_token_obj_compat(buf, &buf_size, obj_token, cont_info.token_size) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "unable to get object token")
+ } /* end if */
+ else {
+ size_t buf_size = H5R_DSET_REG_REF_BUF_SIZE;
+ H5F_t *f = NULL;
+
+ /* Retrieve file from VOL object */
+ if(NULL == (f = (H5F_t *)H5VL_object_data((const H5VL_object_t *)vol_obj_file)))
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid VOL object")
+
+ /* Get object address */
+ if(H5R__decode_token_region_compat(f, buf, &buf_size, obj_token, cont_info.token_size, NULL) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "unable to get object address")
+ } /* end else */
+
+done:
+ if(file_id != H5I_INVALID_HID && H5I_dec_ref(file_id) < 0)
+ HDONE_ERROR(H5E_REFERENCE, H5E_CANTDEC, FAIL, "unable to decrement refcount on file")
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_token_compat() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_token_obj_compat
+ *
+ * Purpose: Encode an object token. (native only)
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__encode_token_obj_compat(const H5O_token_t *obj_token, size_t token_size,
+ unsigned char *buf, size_t *nalloc)
+{
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE_NOERR
+
+ HDassert(obj_token);
+ HDassert(token_size);
+ HDassert(nalloc);
+
+ /* Don't encode if buffer size isn't big enough or buffer is empty */
+ if(buf && *nalloc >= token_size)
+ H5MM_memcpy(buf, obj_token, token_size);
+
+ *nalloc = token_size;
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__encode_token_obj_compat() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_token_obj_compat
+ *
+ * Purpose: Decode an object token. (native only)
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__decode_token_obj_compat(const unsigned char *buf, size_t *nbytes,
+ H5O_token_t *obj_token, size_t token_size)
+{
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(obj_token);
+ HDassert(token_size);
+
+ /* Don't decode if buffer size isn't big enough */
+ if(*nbytes < token_size)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "Buffer size is too small")
+
+ H5MM_memcpy(obj_token, buf, token_size);
+
+ *nbytes = token_size;
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* H5R__decode_token_obj_compat() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__encode_token_region_compat
+ *
+ * Purpose: Encode dataset selection and insert data into heap
+ * (native only).
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__encode_token_region_compat(H5F_t *f, const H5O_token_t *obj_token,
+ size_t token_size, H5S_t *space, unsigned char *buf, size_t *nalloc)
+{
+ size_t buf_size;
+ unsigned char *data = NULL;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(f);
+ HDassert(obj_token);
+ HDassert(token_size);
+ HDassert(space);
+ HDassert(nalloc);
+
+ /* Get required buffer size */
+ if(H5R__encode_heap(f, NULL, &buf_size, NULL, (size_t)0) < 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier")
+
+ if(buf && *nalloc >= buf_size) {
+ ssize_t data_size;
+ uint8_t *p;
+
+ /* Pass the correct encoding version for the selection depending on the
+ * file libver bounds, this is later retrieved in H5S hyper encode */
+ H5CX_set_libver_bounds(f);
+
+ /* Zero the heap ID out, may leak heap space if user is re-using
+ * reference and doesn't have garbage collection turned on
+ */
+ HDmemset(buf, 0, buf_size);
+
+ /* Get the amount of space required to serialize the selection */
+ if((data_size = H5S_SELECT_SERIAL_SIZE(space)) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTINIT, FAIL, "Invalid amount of space for serializing selection")
+
+ /* Increase buffer size to allow for the dataset token */
+ data_size += (hssize_t)token_size;
+
+ /* Allocate the space to store the serialized information */
+ H5_CHECK_OVERFLOW(data_size, hssize_t, size_t);
+ if(NULL == (data = (uint8_t *)H5MM_malloc((size_t)data_size)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_NOSPACE, FAIL, "memory allocation failed")
+
+ /* Serialize information for dataset OID into heap buffer */
+ p = (uint8_t *)data;
+ H5MM_memcpy(p, obj_token, token_size);
+ p += token_size;
+
+ /* Serialize the selection into heap buffer */
+ if(H5S_SELECT_SERIALIZE(space, &p) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTCOPY, FAIL, "Unable to serialize selection")
+
+ /* Write to heap */
+ if(H5R__encode_heap(f, buf, nalloc, data, (size_t)data_size) < 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier")
+ }
+ *nalloc = buf_size;
+
+done:
+ H5MM_free(data);
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* H5R__encode_token_region_compat() */
+
+
+/*-------------------------------------------------------------------------
+ * Function: H5R__decode_token_region_compat
+ *
+ * Purpose: Decode dataset selection from data inserted into heap
+ * (native only).
+ *
+ * Return: SUCCEED/FAIL
+ *
+ *-------------------------------------------------------------------------
+ */
+herr_t
+H5R__decode_token_region_compat(H5F_t *f, const unsigned char *buf,
+ size_t *nbytes, H5O_token_t *obj_token, size_t token_size,
+ H5S_t **space_ptr)
+{
+ unsigned char *data = NULL;
+ H5O_token_t token = { 0 };
+ size_t data_size;
+ const uint8_t *p;
+ H5S_t *space = NULL;
+ herr_t ret_value = SUCCEED;
+
+ FUNC_ENTER_PACKAGE
+
+ HDassert(f);
+ HDassert(buf);
+ HDassert(nbytes);
+ HDassert(token_size);
+
+ /* Read from heap */
+ if(H5R__decode_heap(f, buf, nbytes, &data, &data_size) < 0)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "invalid location identifier")
+
+ /* Get object address */
+ p = (const uint8_t *)data;
+ H5MM_memcpy(&token, p, token_size);
+ p += token_size;
+
+ if(space_ptr) {
+ H5O_loc_t oloc; /* Object location */
+
+ /* Initialize the object location */
+ H5O_loc_reset(&oloc);
+ oloc.file = f;
+
+ if(H5VL_native_token_to_addr(f, H5I_FILE, token, &oloc.addr) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTUNSERIALIZE, FAIL, "can't deserialize object token into address")
+
+ /* Open and copy the dataset's dataspace */
+ if(NULL == (space = H5S_read(&oloc)))
+ HGOTO_ERROR(H5E_REFERENCE, H5E_NOTFOUND, FAIL, "not found")
+
+ /* Unserialize the selection */
+ if(H5S_SELECT_DESERIALIZE(&space, &p) < 0)
+ HGOTO_ERROR(H5E_REFERENCE, H5E_CANTDECODE, FAIL, "can't deserialize selection")
+
+ *space_ptr = space;
+ }
+ if(obj_token)
+ H5MM_memcpy(obj_token, &token, sizeof(H5O_token_t));
+
+done:
+ H5MM_free(data);
+
+ if(ret_value < 0) {
+ if(space && H5S_close(space) < 0)
+ HDONE_ERROR(H5E_DATASET, H5E_CLOSEERROR, FAIL, "unable to release dataspace")
+ }
+
+ FUNC_LEAVE_NOAPI(ret_value)
+} /* end H5R__decode_token_region_compat() */
+