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-rw-r--r--src/H5Zscaleoffset.c667
1 files changed, 508 insertions, 159 deletions
diff --git a/src/H5Zscaleoffset.c b/src/H5Zscaleoffset.c
index 91efacc..9c3ecd7 100644
--- a/src/H5Zscaleoffset.c
+++ b/src/H5Zscaleoffset.c
@@ -32,11 +32,14 @@ typedef struct {
} parms_atomic;
enum H5Z_scaleoffset_type {t_uchar=1, t_ushort, t_uint, t_ulong, t_ulong_long,
- t_schar, t_short, t_int, t_long, t_long_long};
+ t_schar, t_short, t_int, t_long, t_long_long,
+ t_float, t_double};
/* Local function prototypes */
+static double H5Z_scaleoffset_rnd(double val);
static herr_t H5Z_can_apply_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id);
-static enum H5Z_scaleoffset_type H5Z_scaleoffset_get_type(unsigned dtype_size, unsigned dtype_sign);
+static enum H5Z_scaleoffset_type
+H5Z_scaleoffset_get_type(unsigned dtype_class, unsigned dtype_size, unsigned dtype_sign);
static herr_t H5Z_scaleoffset_set_parms_fillval(hid_t dcpl_id, hid_t type_id,
enum H5Z_scaleoffset_type type, unsigned cd_values[], int need_convert);
static herr_t H5Z_set_local_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id);
@@ -45,11 +48,17 @@ static size_t H5Z_filter_scaleoffset(unsigned flags, size_t cd_nelmts, const uns
static void H5Z_scaleoffset_convert(void *buf, unsigned d_nelmts, unsigned dtype_size);
static unsigned H5Z_scaleoffset_log2(unsigned long_long num);
static void
-H5Z_scaleoffset_precompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
- unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval);
+H5Z_scaleoffset_precompress_i(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+ unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval);
static void
-H5Z_scaleoffset_postdecompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
- unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval);
+H5Z_scaleoffset_postdecompress_i(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+ unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval);
+static herr_t
+H5Z_scaleoffset_precompress_fd(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval, int D_val);
+static herr_t
+H5Z_scaleoffset_postdecompress_fd(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval, int D_val);
static void H5Z_scaleoffset_next_byte(size_t *j, int *buf_len);
static void H5Z_scaleoffset_decompress_one_byte(unsigned char *data, size_t data_offset, int k,
int begin_i, unsigned char *buffer, size_t *j, int *buf_len, parms_atomic p, int dtype_len);
@@ -77,28 +86,43 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
}};
/* Local macros */
-#define H5Z_SCALEOFFSET_USER_NPARMS 1 /* Number of parameters that users can set */
-#define H5Z_SCALEOFFSET_TOTAL_NPARMS 20 /* Total number of parameters for filter */
-#define H5Z_SCALEOFFSET_PARM_MINBITS 0 /* "User" parameter for minimum number of bits */
-#define H5Z_SCALEOFFSET_PARM_NELMTS 1 /* "Local" parameter for number of elements in the chunk */
-#define H5Z_SCALEOFFSET_PARM_CLASS 2 /* "Local" parameter for datatype class */
-#define H5Z_SCALEOFFSET_PARM_SIZE 3 /* "Local" parameter for datatype size */
-#define H5Z_SCALEOFFSET_PARM_SIGN 4 /* "Local" parameter for integer datatype sign */
-#define H5Z_SCALEOFFSET_PARM_ORDER 5 /* "Local" parameter for datatype byte order */
-#define H5Z_SCALEOFFSET_PARM_FILAVAIL 6 /* "Local" parameter for dataset fill value existence */
-#define H5Z_SCALEOFFSET_PARM_FILVAL 7 /* "Local" parameter for start location to store dataset fill value */
-
-#define H5Z_SCALEOFFSET_CLS_INTEGER 0 /* Integer (datatype class) */
-#define H5Z_SCALEOFFSET_CLS_FLOAT 1 /* Floatig-point (datatype class) */
-
-#define H5Z_SCALEOFFSET_SGN_NONE 0 /* Unsigned integer type */
-#define H5Z_SCALEOFFSET_SGN_2 1 /* Two's complement signed integer type */
-
-#define H5Z_SCALEOFFSET_ORDER_LE 0 /* Little endian (datatype byte order) */
-#define H5Z_SCALEOFFSET_ORDER_BE 1 /* Big endian (datatype byte order) */
-
-#define H5Z_SCALEOFFSET_FILL_UNDEFINED 0 /* Fill value is not defined */
-#define H5Z_SCALEOFFSET_FILL_DEFINED 1 /* Fill value is defined */
+#define H5Z_SCALEOFFSET_USER_NPARMS 2 /* Number of parameters that users can set */
+#define H5Z_SCALEOFFSET_TOTAL_NPARMS 20 /* Total number of parameters for filter */
+#define H5Z_SCALEOFFSET_PARM_SCALEFACTOR 0 /* "User" parameter for scale factor */
+#define H5Z_SCALEOFFSET_PARM_SCALETYPE 1 /* "User" parameter for scale type */
+#define H5Z_SCALEOFFSET_PARM_NELMTS 2 /* "Local" parameter for number of elements in the chunk */
+#define H5Z_SCALEOFFSET_PARM_CLASS 3 /* "Local" parameter for datatype class */
+#define H5Z_SCALEOFFSET_PARM_SIZE 4 /* "Local" parameter for datatype size */
+#define H5Z_SCALEOFFSET_PARM_SIGN 5 /* "Local" parameter for integer datatype sign */
+#define H5Z_SCALEOFFSET_PARM_ORDER 6 /* "Local" parameter for datatype byte order */
+#define H5Z_SCALEOFFSET_PARM_FILAVAIL 7 /* "Local" parameter for dataset fill value existence */
+#define H5Z_SCALEOFFSET_PARM_FILVAL 8 /* "Local" parameter for start location to store dataset fill value */
+
+#define H5Z_SCALEOFFSET_CLS_INTEGER 0 /* Integer (datatype class) */
+#define H5Z_SCALEOFFSET_CLS_FLOAT 1 /* Floatig-point (datatype class) */
+
+#define H5Z_SCALEOFFSET_SGN_NONE 0 /* Unsigned integer type */
+#define H5Z_SCALEOFFSET_SGN_2 1 /* Two's complement signed integer type */
+
+#define H5Z_SCALEOFFSET_ORDER_LE 0 /* Little endian (datatype byte order) */
+#define H5Z_SCALEOFFSET_ORDER_BE 1 /* Big endian (datatype byte order) */
+
+#define H5Z_SCALEOFFSET_FILL_UNDEFINED 0 /* Fill value is not defined */
+#define H5Z_SCALEOFFSET_FILL_DEFINED 1 /* Fill value is defined */
+
+/* Store fill value in cd_values[] */
+#define H5Z_scaleoffset_save_filval(type, cd_values, fill_val) \
+{ \
+ unsigned i; /* index */ \
+ \
+ /* Store the fill value as the last entry in cd_values[] \
+ * Store byte by byte from least significant byte to most significant byte \
+ * Plenty of space left for the fill value (from index 8 to 19) \
+ */ \
+ for(i = 0; i < sizeof(type); i++) \
+ ((unsigned char *)&cd_values[H5Z_SCALEOFFSET_PARM_FILVAL])[i] = \
+ (fill_val & ((type)0xff << i*8)) >> i*8; \
+}
/* Set the fill value parameter in cd_values[] for unsigned integer type */
#define H5Z_scaleoffset_set_filval_1(type, dcpl_id, type_id, cd_values, need_convert)\
@@ -112,13 +136,7 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
if(need_convert) \
H5Z_scaleoffset_convert(&fill_val, 1, sizeof(type)); \
\
- /* Store the fill value as the last entry in cd_values[] \
- * Store byte by byte from least significant byte to most significant byte \
- * Plenty of space left for the fill value (from index 7 to 19) \
- */ \
- for(i = 0; i < sizeof(type); i++) \
- ((unsigned char *)&cd_values[H5Z_SCALEOFFSET_PARM_FILVAL])[i] = \
- (fill_val & ((type)0xff << i*8)) >> i*8; \
+ H5Z_scaleoffset_save_filval(type, cd_values, fill_val) \
}
/* Set the fill value parameter in cd_values[] for signed integer type */
@@ -133,13 +151,7 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
if(need_convert) \
H5Z_scaleoffset_convert(&fill_val, 1, sizeof(type)); \
\
- /* Store the fill value as the last entry in cd_values[] \
- * Store byte by byte from least significant byte to most significant byte \
- * Plenty of space left for the fill value (from index 7 to 19) \
- */ \
- for(i = 0; i < sizeof(type); i++) \
- ((unsigned char *)&cd_values[H5Z_SCALEOFFSET_PARM_FILVAL])[i] = \
- (fill_val & ((unsigned type)0xff << i*8)) >> i*8; \
+ H5Z_scaleoffset_save_filval(unsigned type, cd_values, fill_val) \
}
/* Set the fill value parameter in cd_values[] for character integer type */
@@ -155,9 +167,33 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
((unsigned char *)&cd_values[H5Z_SCALEOFFSET_PARM_FILVAL])[0] = fill_val; \
}
-/* Get the fill value for certain type */
-#define H5Z_scaleoffset_get_fill_val(i, type, filval_buf, filval, filval_mask)\
+/* Set the fill value parameter in cd_values[] for character floating-point type */
+#define H5Z_scaleoffset_set_filval_4(type, dcpl_id, type_id, cd_values, need_convert)\
+{ \
+ type fill_val; \
+ \
+ /* Get dataset fill value */ \
+ if(H5Pget_fill_value(dcpl_id, type_id, &fill_val)<0) \
+ HGOTO_ERROR(H5E_PLINE, H5E_CANTGET, FAIL, "unable to get fill value") \
+ \
+ if(need_convert) \
+ H5Z_scaleoffset_convert(&fill_val, 1, sizeof(type)); \
+ \
+ if(sizeof(type)==sizeof(int)) \
+ H5Z_scaleoffset_save_filval(unsigned int, cd_values, *(int *)&fill_val) \
+ else if(sizeof(type)==sizeof(long)) \
+ H5Z_scaleoffset_save_filval(unsigned long, cd_values, *(long *)&fill_val) \
+ else if(sizeof(type)==sizeof(long_long)) \
+ H5Z_scaleoffset_save_filval(unsigned long_long, cd_values, *(long_long *)&fill_val)\
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Get the fill value for integer type */
+#define H5Z_scaleoffset_get_filval_1(i, type, filval_buf, filval) \
{ \
+ type filval_mask; \
+ \
/* retrieve fill value from corresponding positions of cd_values[] \
* retrieve them corresponding to how they are stored \
*/ \
@@ -168,7 +204,20 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
} \
}
-/* Find maximum and minimum values of a buffer with fill value defined */
+/* Get the fill value for floating-point type */
+#define H5Z_scaleoffset_get_filval_2(i, type, filval_buf, filval) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ H5Z_scaleoffset_get_filval_1(i, int, filval_buf, *(int *)&filval) \
+ else if(sizeof(type)==sizeof(long)) \
+ H5Z_scaleoffset_get_filval_1(i, long, filval_buf, *(long *)&filval) \
+ else if(sizeof(type)==sizeof(long_long)) \
+ H5Z_scaleoffset_get_filval_1(i, long_long, filval_buf, *(long_long *)&filval) \
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Find maximum and minimum values of a buffer with fill value defined for integer type */
#define H5Z_scaleoffset_max_min_1(i, d_nelmts, buf, filval, max, min)\
{ \
i = 0; while(i < d_nelmts && buf[i]== filval) i++; \
@@ -190,7 +239,20 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
} \
}
-/* Find minimum value of a buffer with fill value defined */
+/* Find maximum and minimum values of a buffer with fill value defined for floating-point type */
+#define H5Z_scaleoffset_max_min_3(i, d_nelmts, buf, filval, max, min, D_val) \
+{ \
+ i = 0; while(i < d_nelmts && HDfabs(buf[i] - filval) < HDpow(10, -D_val)) i++; \
+ if(i < d_nelmts) min = max = buf[i]; \
+ for(; i < d_nelmts; i++) { \
+ if(HDfabs(buf[i] - filval) < HDpow(10, -D_val)) \
+ continue; /* ignore fill value */ \
+ if(buf[i] > max) max = buf[i]; \
+ if(buf[i] < min) min = buf[i]; \
+ } \
+}
+
+/* Find minimum value of a buffer with fill value defined for integer type */
#define H5Z_scaleoffset_min_1(i, d_nelmts, buf, filval, min) \
{ \
i = 0; while(i < d_nelmts && buf[i]== filval) i++; \
@@ -209,36 +271,52 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
if(buf[i] < min) min = buf[i]; \
}
-/* Check range and do some operation for unsigned integer type */
-#define H5Z_scaleoffset_check_1(type, max, min, minbits, minval)\
-{ \
- if(max - min > (type)(~(type)0 - 2)) { \
- *minbits = sizeof(type)*8; \
- *minval = min; \
- return; \
- } \
+/* Check and handle special situation for unsigned integer type */
+#define H5Z_scaleoffset_check_1(type, max, min, minbits) \
+{ \
+ if(max - min > (type)(~(type)0 - 2)) \
+ { *minbits = sizeof(type)*8; return; } \
}
-/* Check range and do some operation for signed integer type */
-#define H5Z_scaleoffset_check_2(type, max, min, minbits, minval) \
-{ \
- if((unsigned type)(max - min) > (unsigned type)(~(unsigned type)0 - 2)) { \
- *minbits = sizeof(type)*8; \
- *minval = min; \
- return; \
- } \
+/* Check and handle special situation for signed integer type */
+#define H5Z_scaleoffset_check_2(type, max, min, minbits) \
+{ \
+ if((unsigned type)(max - min) > (unsigned type)(~(unsigned type)0 - 2)) \
+ { *minbits = sizeof(type)*8; return; } \
+}
+
+/* Check and handle special situation for floating-point type */
+#define H5Z_scaleoffset_check_3(i, type, max, min, minbits, D_val) \
+{ \
+ if(sizeof(type)==sizeof(int)) { \
+ if(H5Z_scaleoffset_rnd(max*HDpow(10, D_val) - min*HDpow(10, D_val)) \
+ > ~(unsigned int)0 - 2) { \
+ *minbits = sizeof(int)*8; goto done; \
+ } \
+ } else if(sizeof(type)==sizeof(long)) { \
+ if(H5Z_scaleoffset_rnd(max*HDpow(10, D_val) - min*HDpow(10, D_val)) \
+ > ~(unsigned long)0 - 2) { \
+ *minbits = sizeof(long)*8; goto done; \
+ } \
+ } else if(sizeof(type)==sizeof(long_long)) { \
+ if(H5Z_scaleoffset_rnd(max*HDpow(10, D_val) - min*HDpow(10, D_val)) \
+ > ~(unsigned long_long)0 - 2) { \
+ *minbits = sizeof(long_long)*8; goto done; \
+ } \
+ } else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
}
/* Precompress for unsigned integer type */
#define H5Z_scaleoffset_precompress_1(type, data, d_nelmts, filavail, filval_buf, minbits, minval)\
{ \
- type *buf = data, min = 0, max = 0, span, filval = 0, filval_mask = 0; \
+ type *buf = data, min = 0, max = 0, span, filval = 0; unsigned i; \
\
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
- H5Z_scaleoffset_get_fill_val(i, type, filval_buf, filval, filval_mask); \
+ H5Z_scaleoffset_get_filval_1(i, type, filval_buf, filval) \
if(*minbits == 0) { /* minbits not set yet, calculate max, min, and minbits */ \
H5Z_scaleoffset_max_min_1(i, d_nelmts, buf, filval, max, min) \
- H5Z_scaleoffset_check_1(type, max, min, minbits, minval) \
+ H5Z_scaleoffset_check_1(type, max, min, minbits) \
span = max - min + 1; \
*minbits = H5Z_scaleoffset_log2(span+1); \
} else /* minbits already set, only calculate min */ \
@@ -250,7 +328,7 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
} else { /* fill value undefined */ \
if(*minbits == 0) { /* minbits not set yet, calculate max, min, and minbits */ \
H5Z_scaleoffset_max_min_2(i, d_nelmts, buf, max, min) \
- H5Z_scaleoffset_check_1(type, max, min, minbits, minval) \
+ H5Z_scaleoffset_check_1(type, max, min, minbits) \
span = max - min + 1; \
*minbits = H5Z_scaleoffset_log2(span); \
} else /* minbits already set, only calculate min */ \
@@ -264,14 +342,14 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
/* Precompress for signed integer type */
#define H5Z_scaleoffset_precompress_2(type, data, d_nelmts, filavail, filval_buf, minbits, minval)\
{ \
- type *buf = data, min = 0, max = 0, filval = 0, filval_mask = 0; \
- unsigned type span; \
+ type *buf = data, min = 0, max = 0, filval = 0; \
+ unsigned type span; unsigned i; \
\
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
- H5Z_scaleoffset_get_fill_val(i, type, filval_buf, filval, filval_mask); \
+ H5Z_scaleoffset_get_filval_1(i, type, filval_buf, filval) \
if(*minbits == 0) { /* minbits not set yet, calculate max, min, and minbits */ \
H5Z_scaleoffset_max_min_1(i, d_nelmts, buf, filval, max, min) \
- H5Z_scaleoffset_check_2(type, max, min, minbits, minval) \
+ H5Z_scaleoffset_check_2(type, max, min, minbits) \
span = max - min + 1; \
*minbits = H5Z_scaleoffset_log2(span+1); \
} else /* minbits already set, only calculate min */ \
@@ -283,7 +361,7 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
} else { /* fill value undefined */ \
if(*minbits == 0) { /* minbits not set yet, calculate max, min, and minbits */ \
H5Z_scaleoffset_max_min_2(i, d_nelmts, buf, max, min) \
- H5Z_scaleoffset_check_2(type, max, min, minbits, minval) \
+ H5Z_scaleoffset_check_2(type, max, min, minbits) \
span = max - min + 1; \
*minbits = H5Z_scaleoffset_log2(span); \
} else /* minbits already set, only calculate min */ \
@@ -294,13 +372,114 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
} \
}
+/* Calculate the span for floating-point type */
+#define H5Z_scaleoffset_calc_span(type, span, max, min, D_val) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ span = (unsigned int)H5Z_scaleoffset_rnd(max*HDpow(10,D_val)-min*HDpow(10,D_val)) + 1; \
+ else if(sizeof(type)==sizeof(long)) \
+ span = (unsigned long)H5Z_scaleoffset_rnd(max*HDpow(10,D_val)-min*HDpow(10,D_val)) + 1;\
+ else if(sizeof(type)==sizeof(long_long)) \
+ span = (unsigned long_long)H5Z_scaleoffset_rnd(max*HDpow(10,D_val)-min*HDpow(10,D_val)) + 1;\
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype") \
+}
+
+/* Modify values of data in precompression if fill value defined for floating-point type */
+#define H5Z_scaleoffset_modify_1(i, type, buf, d_nelmts, filval, minbits, min, D_val) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ for(i = 0; i < d_nelmts; i++) { \
+ if(HDfabs(buf[i] - filval) < HDpow(10, -D_val)) \
+ buf[i] = ((unsigned int)1 << *minbits) - 1; \
+ else \
+ buf[i] = buf[i]*HDpow(10, D_val) - min*HDpow(10, D_val); \
+ } \
+ else if(sizeof(type)==sizeof(long)) \
+ for(i = 0; i < d_nelmts; i++) { \
+ if(HDfabs(buf[i] - filval) < HDpow(10, -D_val)) \
+ buf[i] = ((unsigned long)1 << *minbits) - 1; \
+ else \
+ buf[i] = buf[i]*HDpow(10, D_val) - min*HDpow(10, D_val); \
+ } \
+ else if(sizeof(type)==sizeof(long_long)) \
+ for(i = 0; i < d_nelmts; i++) { \
+ if(HDfabs(buf[i] - filval) < HDpow(10, -D_val)) \
+ buf[i] = ((unsigned long_long)1 << *minbits) - 1; \
+ else \
+ buf[i] = buf[i]*HDpow(10, D_val) - min*HDpow(10, D_val); \
+ } \
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Save the minimum value for floating-point type */
+#define H5Z_scaleoffset_save_min(i, type, minval, min) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ for(i = 0; i < sizeof(int); i++) \
+ ((unsigned char *)minval)[i] = (*(int *)&min & ((int)0xff << i*8)) >> i*8; \
+ else if(sizeof(type)==sizeof(long)) \
+ for(i = 0; i < sizeof(long); i++) \
+ ((unsigned char *)minval)[i] = (*(long *)&min & ((long)0xff << i*8)) >> i*8; \
+ else if(sizeof(type)==sizeof(long_long)) \
+ for(i = 0; i < sizeof(long_long); i++) \
+ ((unsigned char *)minval)[i] = (*(long_long *)&min & ((long_long)0xff << i*8)) >> i*8;\
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Round floating-point values to integers */
+#define H5Z_scaleoffset_round(i, type, d_nelmts, buf) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ for(i = 0; i < d_nelmts; i++) \
+ *(int *)&buf[i] = (int)H5Z_scaleoffset_rnd(buf[i]); \
+ else if(sizeof(type)==sizeof(long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ *(long *)&buf[i] = (long)H5Z_scaleoffset_rnd(buf[i]); \
+ else if(sizeof(type)==sizeof(long_long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ *(long_long *)&buf[i] = (long_long)H5Z_scaleoffset_rnd(buf[i]); \
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Precompress for floating-point type using variable-minimum-bits method */
+#define H5Z_scaleoffset_precompress_3(type, data, d_nelmts, filavail, filval_buf, \
+ minbits, minval, D_val) \
+{ \
+ type *buf = data, min = 0, max = 0, filval = 0; \
+ unsigned long_long span; unsigned i; *minval = 0; \
+ \
+ if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
+ H5Z_scaleoffset_get_filval_2(i, type, filval_buf, filval) \
+ H5Z_scaleoffset_max_min_3(i, d_nelmts, buf, filval, max, min, D_val) \
+ H5Z_scaleoffset_check_3(i, type, max, min, minbits, D_val) \
+ H5Z_scaleoffset_calc_span(type, span, max, min, D_val) \
+ *minbits = H5Z_scaleoffset_log2(span+1); \
+ if(*minbits != sizeof(type)*8) /* change values if minbits != full precision */ \
+ H5Z_scaleoffset_modify_1(i, type, buf, d_nelmts, filval, minbits, min, D_val) \
+ } else { /* fill value undefined */ \
+ H5Z_scaleoffset_max_min_2(i, d_nelmts, buf, max, min) \
+ H5Z_scaleoffset_check_3(i, type, max, min, minbits, D_val) \
+ H5Z_scaleoffset_calc_span(type, span, max, min, D_val) \
+ *minbits = H5Z_scaleoffset_log2(span); \
+ if(*minbits != sizeof(type)*8) /* change values if minbits != full precision */ \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = buf[i]*HDpow(10, D_val) - min*HDpow(10, D_val); \
+ } \
+ H5Z_scaleoffset_save_min(i, type, minval, min) \
+ H5Z_scaleoffset_round(i, type, d_nelmts, buf) \
+}
+
/* Postdecompress for unsigned integer type */
#define H5Z_scaleoffset_postdecompress_1(type, data, d_nelmts, filavail, filval_buf, minbits, minval)\
{ \
- type *buf = data, filval = 0, filval_mask = 0; \
+ type *buf = data, filval = 0; unsigned i; \
\
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
- H5Z_scaleoffset_get_fill_val(i, type, filval_buf, filval, filval_mask) \
+ H5Z_scaleoffset_get_filval_1(i, type, filval_buf, filval) \
for(i = 0; i < d_nelmts; i++) \
buf[i] = (buf[i] == (((type)1 << minbits) - 1))?filval:(buf[i] + minval);\
} else /* fill value undefined */ \
@@ -310,17 +489,90 @@ H5Z_class_t H5Z_SCALEOFFSET[1] = {{
/* Postdecompress for signed integer type */
#define H5Z_scaleoffset_postdecompress_2(type, data, d_nelmts, filavail, filval_buf, minbits, minval)\
{ \
- type *buf = data, filval = 0, filval_mask = 0; \
+ type *buf = data, filval = 0; unsigned i; \
\
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
- H5Z_scaleoffset_get_fill_val(i, type, filval_buf, filval, filval_mask) \
+ H5Z_scaleoffset_get_filval_1(i, type, filval_buf, filval) \
for(i = 0; i < d_nelmts; i++) \
buf[i] = (buf[i] == (((unsigned type)1 << minbits) - 1))?filval:(buf[i] + minval);\
} else /* fill value undefined */ \
for(i = 0; i < d_nelmts; i++) buf[i] += minval; \
}
+/* Retrive minimum value of floating-point type */
+#define H5Z_scaleoffset_get_min(i, type, minval, min) \
+{ \
+ if(sizeof(type)==sizeof(int)) { \
+ int mask; \
+ for(i = 0; i < sizeof(int); i++) { \
+ mask = ((unsigned char *)&minval)[i]; mask <<= i*8; *(int *)&min |= mask; \
+ } \
+ } else if(sizeof(type)==sizeof(long)) { \
+ long mask; \
+ for(i = 0; i < sizeof(long); i++) { \
+ mask = ((unsigned char *)&minval)[i]; mask <<= i*8; *(long *)&min |= mask; \
+ } \
+ } else if(sizeof(type)==sizeof(long_long)) { \
+ long_long mask; \
+ for(i = 0; i < sizeof(long_long); i++) { \
+ mask = ((unsigned char *)&minval)[i]; mask <<= i*8; *(long_long *)&min |= mask;\
+ } \
+ } else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype")\
+}
+
+/* Modify values of data in postdecompression if fill value defined for floating-point type */
+#define H5Z_scaleoffset_modify_2(i, type, buf, d_nelmts, filval, minbits, min, D_val) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(int *)&buf[i]==(((unsigned int)1 << minbits) - 1))? \
+ filval:(*(int *)&buf[i])/HDpow(10, D_val) + min; \
+ else if(sizeof(type)==sizeof(long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(long *)&buf[i]==(((unsigned long)1 << minbits) - 1))? \
+ filval:(*(long *)&buf[i])/HDpow(10, D_val) + min; \
+ else if(sizeof(type)==sizeof(long_long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(long_long *)&buf[i]==(((unsigned long_long)1 << minbits) - 1))? \
+ filval:(*(long_long *)&buf[i])/HDpow(10, D_val) + min; \
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype") \
+}
+
+/* Modify values of data in postdecompression if fill value undefined for floating-point type */
+#define H5Z_scaleoffset_modify_3(i, type, buf, d_nelmts, min, D_val) \
+{ \
+ if(sizeof(type)==sizeof(int)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(int *)&buf[i])/HDpow(10, D_val) + min; \
+ else if(sizeof(type)==sizeof(long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(long *)&buf[i])/HDpow(10, D_val) + min; \
+ else if(sizeof(type)==sizeof(long_long)) \
+ for(i = 0; i < d_nelmts; i++) \
+ buf[i] = (*(long_long *)&buf[i])/HDpow(10, D_val) + min; \
+ else \
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot find matched integer dataype") \
+}
+
+/* Postdecompress for floating-point type using variable-minimum-bits method */
+#define H5Z_scaleoffset_postdecompress_3(type, data, d_nelmts, filavail, filval_buf, \
+ minbits, minval, D_val) \
+{ \
+ type *buf = data, filval = 0, min = 0; unsigned i; \
+ \
+ H5Z_scaleoffset_get_min(i, type, minval, min) \
+ \
+ if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */ \
+ H5Z_scaleoffset_get_filval_2(i, type, filval_buf, filval) \
+ H5Z_scaleoffset_modify_2(i, type, buf, d_nelmts, filval, minbits, min, D_val) \
+ } else /* fill value undefined */ \
+ H5Z_scaleoffset_modify_3(i, type, buf, d_nelmts, min, D_val) \
+}
+
+
/*-------------------------------------------------------------------------
* Function: H5Z_can_apply_scaleoffset
*
@@ -375,52 +627,53 @@ done:
* Function: H5Z_scaleoffset_get_type
*
* Purpose: Get the specific integer type based on datatype size and sign
+ * or floating-point type based on size
*
* Return: Success: id number of integer type
* Failure: 0
*
* Programmer: Xiaowen Wu
- * Saturday, February 26, 2005
+ * Wednesday, April 13, 2005
*
* Modifications:
*
*-------------------------------------------------------------------------
*/
-static enum H5Z_scaleoffset_type H5Z_scaleoffset_get_type(unsigned dtype_size, unsigned dtype_sign)
+static enum H5Z_scaleoffset_type
+H5Z_scaleoffset_get_type(unsigned dtype_class, unsigned dtype_size, unsigned dtype_sign)
{
enum H5Z_scaleoffset_type type; /* integer type */
unsigned ret_value; /* return value */
FUNC_ENTER_NOAPI(H5Z_scaleoffset_get_type, 0)
+
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_INTEGER) {
+ if(dtype_sign==H5Z_SCALEOFFSET_SGN_NONE) { /* unsigned integer */
+ if (dtype_size == sizeof(unsigned char)) type = t_uchar;
+ else if(dtype_size == sizeof(unsigned short)) type = t_ushort;
+ else if(dtype_size == sizeof(unsigned int)) type = t_uint;
+ else if(dtype_size == sizeof(unsigned long)) type = t_ulong;
+ else if(dtype_size == sizeof(unsigned long_long)) type = t_ulong_long;
+ else
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "cannot find matched memory dataype")
+ }
- if(dtype_sign==H5Z_SCALEOFFSET_SGN_NONE) { /* unsigned integer */
- if(dtype_size == sizeof(unsigned char))
- type = t_uchar;
- else if(dtype_size == sizeof(unsigned short))
- type = t_ushort;
- else if(dtype_size == sizeof(unsigned int))
- type = t_uint;
- else if(dtype_size == sizeof(unsigned long))
- type = t_ulong;
- else if(dtype_size == sizeof(unsigned long_long))
- type = t_ulong_long;
- else
- HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "integer size not matched")
+ if(dtype_sign==H5Z_SCALEOFFSET_SGN_2) { /* signed integer */
+ if (dtype_size == sizeof(signed char)) type = t_schar;
+ else if(dtype_size == sizeof(short)) type = t_short;
+ else if(dtype_size == sizeof(int)) type = t_int;
+ else if(dtype_size == sizeof(long)) type = t_long;
+ else if(dtype_size == sizeof(long_long)) type = t_long_long;
+ else
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "cannot find matched memory dataype")
+ }
}
- if(dtype_sign==H5Z_SCALEOFFSET_SGN_2) { /* signed integer */
- if(dtype_size == sizeof(signed char))
- type = t_schar;
- else if(dtype_size == sizeof(short))
- type = t_short;
- else if(dtype_size == sizeof(int))
- type = t_int;
- else if(dtype_size == sizeof(long))
- type = t_long;
- else if(dtype_size == sizeof(long_long))
- type = t_long_long;
- else
- HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "integer size not matched")
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_FLOAT) {
+ if(dtype_size == sizeof(float)) type = t_float;
+ else if(dtype_size == sizeof(double)) type = t_double;
+ else
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "cannot find matched memory dataype")
}
done:
@@ -447,7 +700,6 @@ done:
static herr_t H5Z_scaleoffset_set_parms_fillval(hid_t dcpl_id, hid_t type_id,
enum H5Z_scaleoffset_type type, unsigned cd_values[], int need_convert)
{
- unsigned i; /* index */
herr_t ret_value=SUCCEED; /* Return value */
FUNC_ENTER_NOAPI(H5Z_scaleoffset_set_parms_fillval, FAIL)
@@ -482,6 +734,12 @@ static herr_t H5Z_scaleoffset_set_parms_fillval(hid_t dcpl_id, hid_t type_id,
else if(type == t_long_long)
H5Z_scaleoffset_set_filval_2(long_long, dcpl_id, type_id,
cd_values, need_convert)
+ else if(type == t_float)
+ H5Z_scaleoffset_set_filval_4(float, dcpl_id, type_id,
+ cd_values, need_convert)
+ else if(type == t_double)
+ H5Z_scaleoffset_set_filval_4(double, dcpl_id, type_id,
+ cd_values, need_convert)
done:
FUNC_LEAVE_NOAPI(ret_value)
@@ -517,7 +775,7 @@ H5Z_set_local_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id)
int need_convert = FALSE; /* Flag indicating convertion of byte order */
size_t dtype_size; /* Datatype's size (in bytes) */
H5T_sign_t dtype_sign; /* Datatype's sign */
- enum H5Z_scaleoffset_type type; /* integer type */
+ enum H5Z_scaleoffset_type type; /* Specific datatype */
H5D_fill_value_t status; /* Status of fill value in property list */
herr_t ret_value=SUCCEED; /* Return value */
@@ -621,16 +879,14 @@ H5Z_set_local_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id)
HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "bad H5T_NATIVE_INT endianness order")
} /* end switch */
- if(dtype_class==H5T_INTEGER) {
- /* Before getting fill value, get its integer type */
- if((type = H5Z_scaleoffset_get_type(cd_values[H5Z_SCALEOFFSET_PARM_SIZE],
- cd_values[H5Z_SCALEOFFSET_PARM_SIGN]))==0)
- HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot use C integer datatype for cast")
+ /* Before getting fill value, get its type */
+ if((type = H5Z_scaleoffset_get_type(cd_values[H5Z_SCALEOFFSET_PARM_CLASS],
+ cd_values[H5Z_SCALEOFFSET_PARM_SIZE], cd_values[H5Z_SCALEOFFSET_PARM_SIGN]))==0)
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, FAIL, "cannot use C integer datatype for cast")
- /* Get dataset fill value and store in cd_values[] */
- if(H5Z_scaleoffset_set_parms_fillval(dcpl_id, type_id, type, cd_values, need_convert)<0)
- HGOTO_ERROR(H5E_PLINE, H5E_CANTSET, FAIL, "unable to set fill value")
- }
+ /* Get dataset fill value and store in cd_values[] */
+ if(H5Z_scaleoffset_set_parms_fillval(dcpl_id, type_id, type, cd_values, need_convert)<0)
+ HGOTO_ERROR(H5E_PLINE, H5E_CANTSET, FAIL, "unable to set fill value")
}
/* Modify the filter's parameters for this dataset */
@@ -639,7 +895,6 @@ H5Z_set_local_scaleoffset(hid_t dcpl_id, hid_t type_id, hid_t space_id)
done:
FUNC_LEAVE_NOAPI(ret_value)
-
} /* end H5Z_set_local_scaleoffset() */
@@ -666,11 +921,17 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
size_t ret_value = 0; /* return value */
size_t size_out = 0; /* size of output buffer */
unsigned d_nelmts = 0; /* number of data elements in the chunk */
- enum H5Z_scaleoffset_type type; /* integer type */
- H5T_order_t mem_order; /* memory's endianness order */
- int need_convert = FALSE; /* flag indicating convertion of byte order */
+ unsigned dtype_class; /* datatype class */
+ unsigned dtype_sign; /* integer datatype sign */
+ unsigned filavail; /* flag indicating if fill value is defined or not */
+ int scale_factor = 0; /* scale factor */
+ unsigned scale_type = 0; /* scale type */
+ int D_val = 0; /* decimal scale factor */
uint32_t minbits = 0; /* minimum number of bits to store values */
unsigned long_long minval= 0; /* minimum value of input buffer */
+ enum H5Z_scaleoffset_type type; /* memory type corresponding to dataset datatype */
+ H5T_order_t mem_order; /* memory's endianness order */
+ int need_convert = FALSE; /* flag indicating convertion of byte order */
unsigned char *outbuf = NULL; /* pointer to new output buffer */
unsigned buf_offset = 21; /* buffer offset because of parameters stored in file */
unsigned i; /* index */
@@ -682,12 +943,6 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
if (cd_nelmts!=H5Z_SCALEOFFSET_TOTAL_NPARMS)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, 0, "invalid scaleoffset number of paramters")
- /* do not process if datatype is floating-point, will change later */
- if(cd_values[H5Z_SCALEOFFSET_PARM_CLASS]==H5Z_SCALEOFFSET_CLS_FLOAT) {
- ret_value = *buf_size;
- goto done;
- }
-
/* get memory's endianness order */
if((mem_order=H5Tget_order(H5T_NATIVE_INT))==H5T_ORDER_ERROR)
HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "bad H5T_NATIVE_INT endianness order")
@@ -706,22 +961,44 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "bad H5T_NATIVE_INT endianness order")
} /* end switch */
- /* check and assign value to minimum number of bits if set by user */
- if(cd_values[H5Z_SCALEOFFSET_PARM_MINBITS]!=0) {
- if(cd_values[H5Z_SCALEOFFSET_PARM_MINBITS]>cd_values[H5Z_SCALEOFFSET_PARM_SIZE]*8)
+ /* copy filter parameters to local variables */
+ d_nelmts = cd_values[H5Z_SCALEOFFSET_PARM_NELMTS];
+ dtype_class = cd_values[H5Z_SCALEOFFSET_PARM_CLASS];
+ dtype_sign = cd_values[H5Z_SCALEOFFSET_PARM_SIGN];
+ filavail = cd_values[H5Z_SCALEOFFSET_PARM_FILAVAIL];
+ scale_factor = cd_values[H5Z_SCALEOFFSET_PARM_SCALEFACTOR];
+ scale_type = cd_values[H5Z_SCALEOFFSET_PARM_SCALETYPE];
+
+ /* check and assign proper values set by user to related parameters
+ * scale type = 0: floating-point type, variable-minimum-bits method,
+ * scale factor is decimal scale factor
+ * scale type = 1: floating-point type, fixed-minimum-bits method,
+ * scale factor is the fixed minimum number of bits
+ * scale type = other: integer type, scale_factor is minimum number of bits
+ */
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_FLOAT) { /* floating-point type */
+ if(scale_type!=0 && scale_type!=1)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, 0, "scale type must be 0 or 1")
+ }
+ else if(dtype_class==H5Z_SCALEOFFSET_CLS_INTEGER) { /* integer type */
+ if(scale_type==0 || scale_type==1)
+ HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, 0, "scale type cannot be 0 or 1")
+ }
+
+ if(scale_type==0) { /* floating-point type, variable-minimum-bits */
+ D_val = scale_factor;
+ } else { /* integer type, or floating-point type with fixed-minimum-bits method */
+ if(scale_factor>cd_values[H5Z_SCALEOFFSET_PARM_SIZE]*8)
HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, 0, "minimum number of bits exceeds maximum")
/* no need to process data */
- if(cd_values[H5Z_SCALEOFFSET_PARM_MINBITS]==cd_values[H5Z_SCALEOFFSET_PARM_SIZE]*8) {
+ if(scale_factor==cd_values[H5Z_SCALEOFFSET_PARM_SIZE]*8) {
ret_value = *buf_size;
goto done;
}
- minbits = cd_values[H5Z_SCALEOFFSET_PARM_MINBITS];
+ minbits = scale_factor;
}
- /* copy a filter parameter to d_nelmts */
- d_nelmts = cd_values[H5Z_SCALEOFFSET_PARM_NELMTS];
-
/* prepare paramters to pass to compress/decompress functions */
p.size = cd_values[H5Z_SCALEOFFSET_PARM_SIZE];
p.mem_order = mem_order;
@@ -744,7 +1021,7 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
/* retrieval of minval takes into consideration situation where sizeof
* unsigned long_long (datatype of minval) may change from compression
- * to decompression
+ * to decompression, only smaller size is used
*/
minval_size = sizeof(unsigned long_long) <= ((unsigned char *)*buf)[4] ?
sizeof(unsigned long_long) : ((unsigned char *)*buf)[4];
@@ -788,14 +1065,21 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
for(i = 0; i < size_out; i++) outbuf[i] = 0;
}
- /* before postprocess, get integer type */
- if((type = H5Z_scaleoffset_get_type(cd_values[H5Z_SCALEOFFSET_PARM_SIZE],
- cd_values[H5Z_SCALEOFFSET_PARM_SIGN]))==0)
+ /* before postprocess, get memory type */
+ if((type = H5Z_scaleoffset_get_type(dtype_class, p.size, dtype_sign))==0)
HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "cannot use C integer datatype for cast")
/* postprocess after decompression */
- H5Z_scaleoffset_postdecompress(outbuf, d_nelmts, type, cd_values[H5Z_SCALEOFFSET_PARM_FILAVAIL],
- &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], minbits, minval);
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_INTEGER)
+ H5Z_scaleoffset_postdecompress_i(outbuf, d_nelmts, type, filavail,
+ &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], minbits, minval);
+
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_FLOAT)
+ if(scale_type==0) { /* variable-minimum-bits method */
+ if(H5Z_scaleoffset_postdecompress_fd(outbuf, d_nelmts, type, filavail,
+ &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], minbits, minval, D_val)==FAIL)
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "post-decompression failed")
+ }
/* after postprocess, convert to dataset datatype endianness order if needed */
if(need_convert)
@@ -809,15 +1093,22 @@ H5Z_filter_scaleoffset (unsigned flags, size_t cd_nelmts, const unsigned cd_valu
if(need_convert)
H5Z_scaleoffset_convert(*buf, d_nelmts, p.size);
- /* before preprocess, get integer type */
- if((type = H5Z_scaleoffset_get_type(cd_values[H5Z_SCALEOFFSET_PARM_SIZE],
- cd_values[H5Z_SCALEOFFSET_PARM_SIGN]))==0)
+ /* before preprocess, get memory type */
+ if((type = H5Z_scaleoffset_get_type(dtype_class, p.size, dtype_sign))==0)
HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "cannot use C integer datatype for cast")
/* preprocess before compression */
- H5Z_scaleoffset_precompress(*buf, d_nelmts, type, cd_values[H5Z_SCALEOFFSET_PARM_FILAVAIL],
- &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], &minbits, &minval);
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_INTEGER)
+ H5Z_scaleoffset_precompress_i(*buf, d_nelmts, type, filavail,
+ &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], &minbits, &minval);
+ if(dtype_class==H5Z_SCALEOFFSET_CLS_FLOAT)
+ if(scale_type==0) { /* variable-minimum-bits method */
+ if(H5Z_scaleoffset_precompress_fd(*buf, d_nelmts, type, filavail,
+ &cd_values[H5Z_SCALEOFFSET_PARM_FILVAL], &minbits, &minval, D_val)==FAIL)
+ HGOTO_ERROR(H5E_PLINE, H5E_BADTYPE, 0, "pre-compression failed")
+ }
+
assert(minbits <= p.size * 8);
/* calculate buffer size after compression
@@ -905,6 +1196,24 @@ static void H5Z_scaleoffset_convert(void *buf, unsigned d_nelmts, unsigned dtype
}
}
+/* Round a floating-point value to the nearest integer value 4/19/05 */
+static double H5Z_scaleoffset_rnd(double val)
+{
+ double u_val, l_val;
+
+ u_val = HDceil(val);
+ l_val = HDfloor(val);
+
+ if(val > 0) {
+ if((u_val - val)<(val - l_val)) return u_val;
+ else return l_val;
+ }
+ else {
+ if((val - l_val)<(u_val - val)) return l_val;
+ else return u_val;
+ }
+}
+
/* return ceiling of floating-point log2 function
* receive unsigned integer as argument 3/10/2005
*/
@@ -920,12 +1229,11 @@ static unsigned H5Z_scaleoffset_log2(unsigned long_long num)
else return v+1;
}
+/* precompress for integer type */
static void
-H5Z_scaleoffset_precompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
- unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval)
+H5Z_scaleoffset_precompress_i(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+ unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval)
{
- unsigned i;
-
if(type == t_uchar)
H5Z_scaleoffset_precompress_1(unsigned char, data, d_nelmts,
filavail, filval_buf, minbits, minval)
@@ -942,17 +1250,15 @@ H5Z_scaleoffset_precompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_
H5Z_scaleoffset_precompress_1(unsigned long_long, data, d_nelmts,
filavail, filval_buf, minbits, minval)
else if(type == t_schar) {
- signed char *buf = data, min = 0, max = 0, filval = 0, filval_mask = 0;
- unsigned char span;
+ signed char *buf = data, min = 0, max = 0, filval = 0;
+ unsigned char span; unsigned i;
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */
- H5Z_scaleoffset_get_fill_val(i, signed char, filval_buf, filval, filval_mask);
+ H5Z_scaleoffset_get_filval_1(i, signed char, filval_buf, filval);
if(*minbits == 0) { /* minbits not set yet, calculate max, min, and minbits */
H5Z_scaleoffset_max_min_1(i, d_nelmts, buf, filval, max, min)
- if((unsigned char)(max - min) > (unsigned char)(~(unsigned char)0 - 2)) {
- *minbits = sizeof(signed char)*8;
- *minval = min; return;
- }
+ if((unsigned char)(max - min) > (unsigned char)(~(unsigned char)0 - 2))
+ { *minbits = sizeof(signed char)*8; return; }
span = max - min + 1;
*minbits = H5Z_scaleoffset_log2(span+1);
} else /* minbits already set, only calculate min */
@@ -991,11 +1297,11 @@ H5Z_scaleoffset_precompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_
filavail, filval_buf, minbits, minval)
}
+/* postdecompress for integer type */
static void
-H5Z_scaleoffset_postdecompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
- unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval)
+H5Z_scaleoffset_postdecompress_i(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+ unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval)
{
- unsigned i;
long_long sminval = *(long_long*)&minval; /* for signed integer types */
if(type == t_uchar)
@@ -1014,10 +1320,10 @@ H5Z_scaleoffset_postdecompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffs
H5Z_scaleoffset_postdecompress_1(unsigned long_long, data, d_nelmts, filavail,
filval_buf, minbits, minval)
else if(type == t_schar) {
- signed char *buf = data, filval = 0, filval_mask = 0;
+ signed char *buf = data, filval = 0; unsigned i;
if(filavail == H5Z_SCALEOFFSET_FILL_DEFINED) { /* fill value defined */
- H5Z_scaleoffset_get_fill_val(i, signed char, filval_buf, filval, filval_mask)
+ H5Z_scaleoffset_get_filval_1(i, signed char, filval_buf, filval)
for(i = 0; i < d_nelmts; i++)
buf[i] = (buf[i] == (((unsigned char)1 << minbits) - 1))?filval:(buf[i] + sminval);
} else /* fill value undefined */
@@ -1037,6 +1343,49 @@ H5Z_scaleoffset_postdecompress(void *data, unsigned d_nelmts, enum H5Z_scaleoffs
filval_buf, minbits, sminval)
}
+/* precompress for floating-point type, variable-minimum-bits method
+ success: non-negative, failure: negative 4/15/05 */
+static herr_t
+H5Z_scaleoffset_precompress_fd(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+unsigned filavail, void *filval_buf, uint32_t *minbits, unsigned long_long *minval, int D_val)
+{
+ herr_t ret_value=SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5Z_scaleoffset_precompress_fd, FAIL)
+
+ if(type == t_float)
+ H5Z_scaleoffset_precompress_3(float, data, d_nelmts,
+ filavail, filval_buf, minbits, minval, D_val)
+ else if(type == t_double)
+ H5Z_scaleoffset_precompress_3(double, data, d_nelmts,
+ filavail, filval_buf, minbits, minval, D_val)
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+}
+
+/* postdecompress for floating-point type, variable-minimum-bits method
+ success: non-negative, failure: negative 4/15/05 */
+static herr_t
+H5Z_scaleoffset_postdecompress_fd(void *data, unsigned d_nelmts, enum H5Z_scaleoffset_type type,
+unsigned filavail, void *filval_buf, uint32_t minbits, unsigned long_long minval, int D_val)
+{
+ long_long sminval = *(long_long*)&minval; /* for signed integer types */
+ herr_t ret_value=SUCCEED; /* Return value */
+
+ FUNC_ENTER_NOAPI(H5Z_scaleoffset_postdecompress_fd, FAIL)
+
+ if(type == t_float)
+ H5Z_scaleoffset_postdecompress_3(float, data, d_nelmts, filavail,
+ filval_buf, minbits, sminval, D_val)
+ else if(type == t_double)
+ H5Z_scaleoffset_postdecompress_3(double, data, d_nelmts, filavail,
+ filval_buf, minbits, sminval, D_val)
+
+done:
+ FUNC_LEAVE_NOAPI(ret_value)
+}
+
static void H5Z_scaleoffset_next_byte(size_t *j, int *buf_len)
{
++(*j); *buf_len = 8 * sizeof(unsigned char);