diff options
Diffstat (limited to 'src')
| -rw-r--r-- | src/H5F.c | 87 | ||||
| -rw-r--r-- | src/H5FS.c | 180 | ||||
| -rw-r--r-- | src/H5FScache.c | 17 | ||||
| -rw-r--r-- | src/H5FSdbg.c | 6 | ||||
| -rw-r--r-- | src/H5FSprivate.h | 5 | ||||
| -rw-r--r-- | src/H5FSsection.c | 65 | ||||
| -rw-r--r-- | src/H5Fdeprec.c | 172 | ||||
| -rw-r--r-- | src/H5Fpkg.h | 7 | ||||
| -rw-r--r-- | src/H5Fprivate.h | 7 | ||||
| -rw-r--r-- | src/H5Fpublic.h | 65 | ||||
| -rw-r--r-- | src/H5Fsuper.c | 87 | ||||
| -rw-r--r-- | src/H5Fsuper_cache.c | 36 | ||||
| -rw-r--r-- | src/H5MF.c | 314 | ||||
| -rw-r--r-- | src/H5MFaggr.c | 8 | ||||
| -rw-r--r-- | src/H5MFdbg.c | 62 | ||||
| -rw-r--r-- | src/H5MFprivate.h | 4 | ||||
| -rw-r--r-- | src/H5O.c | 1 | ||||
| -rw-r--r-- | src/H5Ofsinfo.c | 309 | ||||
| -rw-r--r-- | src/H5Opkg.h | 4 | ||||
| -rw-r--r-- | src/H5Oprivate.h | 12 | ||||
| -rw-r--r-- | src/H5Pdeprec.c | 54 | ||||
| -rw-r--r-- | src/H5Pfcpl.c | 152 | ||||
| -rw-r--r-- | src/H5Ppublic.h | 9 | ||||
| -rwxr-xr-x | src/H5SM.c | 13 | ||||
| -rwxr-xr-x | src/H5SMprivate.h | 2 | ||||
| -rw-r--r-- | src/H5trace.c | 75 | ||||
| -rw-r--r-- | src/H5vers.txt | 1 | ||||
| -rw-r--r-- | src/H5version.h | 130 | ||||
| -rwxr-xr-x | src/Makefile.am | 5 | ||||
| -rw-r--r-- | src/Makefile.in | 29 |
30 files changed, 1752 insertions, 166 deletions
@@ -891,6 +891,10 @@ H5F_new(H5F_file_t *shared, hid_t fcpl_id, hid_t fapl_id, H5FD_t *lf) if(H5P_get(plist, H5F_CRT_SHMSG_NINDEXES_NAME, &f->shared->sohm_nindexes) < 0) HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get number of SOHM indexes") HDassert(f->shared->sohm_nindexes < 255); + if(H5P_get(plist, H5F_CRT_FILE_SPACE_STRATEGY_NAME, &f->shared->fs_strategy) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get file space strategy") + if(H5P_get(plist, H5F_CRT_FREE_SPACE_THRESHOLD_NAME, &f->shared->fs_threshold) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, NULL, "can't get free-space section threshold") /* Get the FAPL values to cache */ if(NULL == (plist = (H5P_genplist_t *)H5I_object(fapl_id))) @@ -1025,9 +1029,11 @@ H5F_dest(H5F_t *f, hid_t dxpl_id) * and also because releasing free space can shrink the file's * 'eoa' value) */ - if(H5MF_close(f, dxpl_id) < 0) - /* Push error, but keep going*/ - HDONE_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release file free space info") + if(H5F_ACC_RDWR & H5F_INTENT(f)) { + if(H5MF_close(f, dxpl_id) < 0) + /* Push error, but keep going*/ + HDONE_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "can't release file free space info") + } /* end if */ /* Unpin the superblock, since we're about to destroy the cache */ if(H5AC_unpin_entry(f, f->shared->sblock) < 0) @@ -2775,11 +2781,13 @@ done: /*------------------------------------------------------------------------- - * Function: H5Fget_info - * 1. Get storage size for superblock extension if there is one + * Function: H5Fget_info2 + * + * Purpose: Gets general information about the file, including: + * 1. Get storage size for superblock extension if there is one. * 2. Get the amount of btree and heap storage for entries * in the SOHM table if there is one. - * Consider success when there is no superblock extension and/or SOHM table + * 3. The amount of free space tracked in the file. * * Return: Success: non-negative on success * Failure: Negative @@ -2790,12 +2798,12 @@ done: *------------------------------------------------------------------------- */ herr_t -H5Fget_info(hid_t obj_id, H5F_info_t *finfo) +H5Fget_info2(hid_t obj_id, H5F_info2_t *finfo) { H5F_t *f; /* Top file in mount hierarchy */ herr_t ret_value = SUCCEED; /* Return value */ - FUNC_ENTER_API(H5Fget_info, FAIL) + FUNC_ENTER_API(H5Fget_info2, FAIL) H5TRACE2("e", "i*x", obj_id, finfo); /* Check args */ @@ -2821,18 +2829,67 @@ H5Fget_info(hid_t obj_id, H5F_info_t *finfo) HDassert(f->shared); /* Reset file info struct */ - HDmemset(finfo, 0, sizeof(H5F_info_t)); + HDmemset(finfo, 0, sizeof(*finfo)); + + /* Get the size of the superblock and any superblock extensions */ + if(H5F_super_size(f, H5AC_ind_dxpl_id, &finfo->super.super_size, &finfo->super.super_ext_size) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve superblock sizes") - /* Check for superblock extension info */ - if(H5F_super_size(f, H5AC_ind_dxpl_id, NULL, &finfo->super_ext_size) < 0) - HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve superblock extension size") + /* Get the size of any persistent free space */ + if(H5MF_get_freespace(f, H5AC_ind_dxpl_id, &finfo->free.tot_space, &finfo->free.meta_size) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve free space information") /* Check for SOHM info */ if(H5F_addr_defined(f->shared->sohm_addr)) - if(H5SM_ih_size(f, H5AC_ind_dxpl_id, finfo) < 0) - HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve SOHM btree & heap storage info") + if(H5SM_ih_size(f, H5AC_ind_dxpl_id, &finfo->sohm.hdr_size, &finfo->sohm.msgs_info) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve SOHM index & heap storage info") + + /* Set version # fields */ + finfo->super.version = f->shared->sblock->super_vers; + finfo->sohm.version = f->shared->sohm_vers; + finfo->free.version = HDF5_FREESPACE_VERSION; + +done: + FUNC_LEAVE_API(ret_value) +} /* end H5Fget_info2() */ + + +/*------------------------------------------------------------------------- + * Function: H5Fget_free_sections + * + * Purpose: To get free-space section information for free-space manager with + * TYPE that is associated with file FILE_ID. + * If SECT_INFO is null, this routine returns the total # of free-space + * sections. + * + * Return: Success: non-negative, the total # of free space sections + * Failure: negative + * + * Programmer: Vailin Choi; July 1st, 2009 + * + *------------------------------------------------------------------------- + */ +ssize_t +H5Fget_free_sections(hid_t file_id, H5F_mem_t type, size_t nsects, + H5F_sect_info_t *sect_info/*out*/) +{ + H5F_t *file; /* Top file in mount hierarchy */ + ssize_t ret_value; /* Return value */ + + FUNC_ENTER_API(H5Fget_free_sections, FAIL) + H5TRACE4("Zs", "iFmzx", file_id, type, nsects, sect_info); + + /* Check args */ + if(NULL == (file = (H5F_t *)H5I_object_verify(file_id, H5I_FILE))) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a file ID") + if(sect_info && nsects == 0) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "nsects must be > 0") + + /* Go get the free-space section information in the file */ + if((ret_value = H5MF_get_free_sections(file, H5AC_ind_dxpl_id, type, nsects, sect_info)) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "unable to check free space for file") done: FUNC_LEAVE_API(ret_value) -} /* end H5Fget_info() */ +} /* end H5Fget_free_sections() */ @@ -477,9 +477,6 @@ HDfprintf(stderr, "%s: Section info is NOT for file free space\n", FUNC); if(fspace->serial_sect_count > 0) /* Sanity check that section info has address */ HDassert(H5F_addr_defined(fspace->sect_addr)); - else - /* Sanity check that section info doesn't have address */ - HDassert(!H5F_addr_defined(fspace->sect_addr)); } /* end else */ /* Decrement the reference count on the free space manager header */ @@ -723,6 +720,183 @@ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5FS_dirty() */ + +/*------------------------------------------------------------------------- + * Function: H5FS_alloc_hdr() + * + * Purpose: Allocate space for the free-space manager header + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5FS_alloc_hdr(H5F_t *f, H5FS_t *fspace, haddr_t *fs_addr, hid_t dxpl_id) +{ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(H5FS_alloc_hdr, FAIL) + + /* Check arguments. */ + HDassert(f); + HDassert(fspace); + + if(!H5F_addr_defined(fspace->addr)) { + /* Allocate space for the free space header */ + if(HADDR_UNDEF == (fspace->addr = H5MF_alloc(f, H5FD_MEM_FSPACE_HDR, dxpl_id, (hsize_t)H5FS_HEADER_SIZE(f)))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "file allocation failed for free space header") + + /* Cache the new free space header (pinned) */ + if(H5AC_set(f, dxpl_id, H5AC_FSPACE_HDR, fspace->addr, fspace, H5AC__PIN_ENTRY_FLAG) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTINIT, FAIL, "can't add free space header to cache") + } /* end if */ + + if(fs_addr) + *fs_addr = fspace->addr; + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5FS_alloc_hdr() */ + + +/*------------------------------------------------------------------------- + * Function: H5FS_alloc_sect() + * + * Purpose: Allocate space for the free-space manager section info header + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5FS_alloc_sect(H5F_t *f, H5FS_t *fspace, hid_t dxpl_id) +{ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(H5FS_alloc_sect, FAIL) + + /* Check arguments. */ + HDassert(f); + HDassert(fspace); + + if(!H5F_addr_defined(fspace->sect_addr) && fspace->sinfo && fspace->serial_sect_count > 0) { + /* Allocate space for section info from aggregator/vfd */ + /* (The original version called H5MF_alloc(), but that may cause sect_size to change again) */ + if(HADDR_UNDEF == (fspace->sect_addr = H5MF_aggr_vfd_alloc(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, fspace->sect_size))) + HGOTO_ERROR(H5E_FSPACE, H5E_NOSPACE, FAIL, "file allocation failed for section info") + + fspace->alloc_sect_size = fspace->sect_size; + + /* Mark free-space header as dirty */ + if(H5FS_dirty(f, fspace) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTMARKDIRTY, FAIL, "unable to mark free space header as dirty") + + /* Cache the free-space section info */ + if(H5AC_set(f, dxpl_id, H5AC_FSPACE_SINFO, fspace->sect_addr, fspace->sinfo, H5AC__NO_FLAGS_SET) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTINIT, FAIL, "can't add free space sections to cache") + + fspace->sinfo = NULL; + } /* end if */ + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5FS_alloc_sect() */ + + +/*------------------------------------------------------------------------- + * Function: H5FS_free() + * + * Purpose: Free space for free-space manager header and section info header + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5FS_free(H5F_t *f, H5FS_t *fspace, hid_t dxpl_id) +{ + herr_t ret_value = SUCCEED; /* Return value */ + haddr_t saved_addr; + hsize_t saved_size; + unsigned cache_flags; + unsigned sinfo_status = 0; + unsigned hdr_status = 0; + + FUNC_ENTER_NOAPI(H5FS_free, FAIL) + + /* Check arguments. */ + HDassert(f); + HDassert(fspace); + + cache_flags = H5AC__DELETED_FLAG | H5AC__TAKE_OWNERSHIP_FLAG;; + + if(H5F_addr_defined(fspace->sect_addr)) { + + /* Check whether free-space manager section info is in cache or not */ + if(H5AC_get_entry_status(f, fspace->sect_addr, &sinfo_status) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTGET, FAIL, "unable to check metadata cache status for free-space section info") + + /* Load free-space manager section info */ + if(sinfo_status & H5AC_ES__IN_CACHE || !fspace->sinfo) { + if(NULL == (fspace->sinfo = (H5FS_sinfo_t *)H5AC_protect(f, dxpl_id, H5AC_FSPACE_SINFO, fspace->sect_addr, NULL, fspace, H5AC_READ))) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to load free space section info") + + /* Unload and release ownership of the free-space manager section info */ + if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_SINFO, fspace->sect_addr, fspace->sinfo, cache_flags) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to release free space section info") + } + + saved_addr = fspace->sect_addr; + saved_size = fspace->alloc_sect_size; + + fspace->sect_addr = HADDR_UNDEF; + fspace->alloc_sect_size = 0; + + /* Free space for the free-space manager section info */ + if(H5MF_xfree(f, H5FD_MEM_FSPACE_SINFO, dxpl_id, saved_addr, saved_size) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to release free space sections") + + /* Mark free-space manager header as dirty */ + if(H5FS_dirty(f, fspace) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTMARKDIRTY, FAIL, "unable to mark free space header as dirty") + } + + if(H5F_addr_defined(fspace->addr)) { + /* Check whether free-space manager header is in cache or not */ + if(H5AC_get_entry_status(f, fspace->addr, &hdr_status) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTGET, FAIL, "unable to check metadata cache status for free-space section info") + + if(hdr_status & H5AC_ES__IN_CACHE) { + /* Unpin the free-space manager header */ + if(H5AC_unpin_entry(f, fspace) < 0) + HGOTO_ERROR(H5E_HEAP, H5E_CANTUNPIN, FAIL, "unable to unpin fractal heap header") + + /* Load the free-space manager header */ + if(NULL == (fspace = (H5FS_t *)H5AC_protect(f, dxpl_id, H5AC_FSPACE_HDR, fspace->addr, NULL, fspace, H5AC_READ))) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to load free space section info") + + /* Unload and release ownership of the free-space header */ + if(H5AC_unprotect(f, dxpl_id, H5AC_FSPACE_HDR, fspace->addr, fspace, cache_flags) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTUNPROTECT, FAIL, "unable to release free space section info") + } + saved_addr = fspace->addr; + fspace->addr = HADDR_UNDEF; + + /* Free space for the free-space manager header */ + if(H5MF_xfree(f, H5FD_MEM_FSPACE_HDR, dxpl_id, saved_addr, (hsize_t)H5FS_HEADER_SIZE(f)) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "unable to free free space header") + } + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5FS_free() */ + #ifdef H5FS_DEBUG_ASSERT /*------------------------------------------------------------------------- diff --git a/src/H5FScache.c b/src/H5FScache.c index a7978f5..482b9cb 100644 --- a/src/H5FScache.c +++ b/src/H5FScache.c @@ -334,10 +334,7 @@ HDfprintf(stderr, "%s: fspace->alloc_sect_size = %Hu, fspace->sect_size = %Hu\n" if(H5FS_cache_sinfo_flush(f, dxpl_id, FALSE, fspace->sect_addr, fspace->sinfo, NULL) < 0) HGOTO_ERROR(H5E_FSPACE, H5E_CANTFLUSH, FAIL, "unable to save free space section info to disk") } /* end if */ - else { - /* Sanity check that section info doesn't have address */ - HDassert(!H5F_addr_defined(fspace->sect_addr)); - } /* end else */ + #ifdef QAK HDfprintf(stderr, "%s: Check 2.0\n", FUNC); HDfprintf(stderr, "%s: fspace->sect_addr = %a, fspace->sinfo = %p\n", FUNC, fspace->sect_addr, fspace->sinfo); @@ -348,15 +345,9 @@ HDfprintf(stderr, "%s: fspace->alloc_sect_size = %Hu, fspace->sect_size = %Hu\n" fspace->sinfo->dirty = FALSE; } /* end if */ } /* end if */ - else { - /* Just sanity checks... */ - if(fspace->serial_sect_count > 0) - /* Sanity check that section info has address */ - HDassert(H5F_addr_defined(fspace->sect_addr)); - else - /* Sanity check that section info doesn't have address */ - HDassert(!H5F_addr_defined(fspace->sect_addr)); - } /* end else */ + else if(fspace->serial_sect_count > 0) + /* Sanity check that section info has address */ + HDassert(H5F_addr_defined(fspace->sect_addr)); if(fspace->cache_info.is_dirty) { uint8_t *hdr; /* Pointer to header buffer */ diff --git a/src/H5FSdbg.c b/src/H5FSdbg.c index df48240..8cf64ef 100644 --- a/src/H5FSdbg.c +++ b/src/H5FSdbg.c @@ -286,10 +286,8 @@ H5FS_sects_debug(H5F_t *f, hid_t dxpl_id, haddr_t UNUSED addr, FILE *stream, int break; case H5FS_CLIENT_FILE_ID: -#ifdef NOT_YET - if(H5MF_sects_debug(f, dxpl_id, fs_addr, stream, indent + 3, MAX(0, fwidth - 3)) < 0) - HGOTO_ERROR(H5E_FSPACE, H5E_SYSTEM, FAIL, "unable to dump file free space sections") -#endif /* NOT_YET */ + if(H5MF_sects_debug(f, dxpl_id, fs_addr, stream, indent + 3, MAX(0, fwidth - 3)) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_SYSTEM, FAIL, "unable to dump file free space sections") break; default: diff --git a/src/H5FSprivate.h b/src/H5FSprivate.h index 056449d..145c374 100644 --- a/src/H5FSprivate.h +++ b/src/H5FSprivate.h @@ -180,10 +180,15 @@ H5_DLL H5FS_t *H5FS_open(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr, H5_DLL herr_t H5FS_size(const H5F_t *f, const H5FS_t *fspace, hsize_t *meta_size); H5_DLL herr_t H5FS_delete(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr); H5_DLL herr_t H5FS_close(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace); +H5_DLL herr_t H5FS_alloc_hdr(H5F_t *f, H5FS_t *fspace, haddr_t *fs_addr, hid_t dxpl_id); +H5_DLL herr_t H5FS_alloc_sect(H5F_t *f, H5FS_t *fspace, hid_t dxpl_id); +H5_DLL herr_t H5FS_free(H5F_t *f, H5FS_t *fspace, hid_t dxpl_id); /* Free space section routines */ H5_DLL herr_t H5FS_sect_add(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace, H5FS_section_info_t *node, unsigned flags, void *op_data); +H5_DLL htri_t H5FS_sect_try_merge(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace, + H5FS_section_info_t *sect, unsigned flags, void *op_data); H5_DLL htri_t H5FS_sect_try_extend(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace, haddr_t addr, hsize_t size, hsize_t extra_requested); H5_DLL herr_t H5FS_sect_remove(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace, diff --git a/src/H5FSsection.c b/src/H5FSsection.c index 26ff7b9..30885a9 100644 --- a/src/H5FSsection.c +++ b/src/H5FSsection.c @@ -1562,6 +1562,71 @@ done: /*------------------------------------------------------------------------- + * Function: H5FS_sect_try_merge + * + * Purpose: Try to merge/shrink a block + * + * Return: TRUE: merged/shrunk + * FALSE: not merged/not shrunk + * Failure: negative + * + * Programmer: Vailin Choi; June 10, 2009 + * + *------------------------------------------------------------------------- + */ +htri_t +H5FS_sect_try_merge(H5F_t *f, hid_t dxpl_id, H5FS_t *fspace, H5FS_section_info_t *sect, + unsigned flags, void *op_data) +{ + hbool_t sinfo_valid = FALSE; /* Whether the section info is valid */ + hbool_t sinfo_modified = FALSE; /* Whether the section info was modified */ + hsize_t saved_fs_size; /* copy the free-space section size */ + htri_t ret_value = FALSE; /* Return value */ + + FUNC_ENTER_NOAPI(H5FS_sect_try_merge, FAIL) + + /* Check arguments. */ + HDassert(f); + HDassert(fspace); + HDassert(sect); + HDassert(H5F_addr_defined(sect->addr)); + HDassert(sect->size); + + /* Get a pointer to the section info */ + if(H5FS_sinfo_lock(f, dxpl_id, fspace, H5AC_WRITE) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTGET, FAIL, "can't get section info") + sinfo_valid = TRUE; + saved_fs_size = sect->size; + + /* Attempt to merge/shrink section with existing sections */ + if(H5FS_sect_merge(fspace, §, op_data) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTMERGE, FAIL, "can't merge sections") + + /* Check if section is shrunk and/or merged away completely */ + if(!sect) { + sinfo_modified = TRUE; + HGOTO_DONE(TRUE) + } /* end if */ + else { + /* Check if section is merged */ + if(sect->size > saved_fs_size) { + if(H5FS_sect_link(fspace, sect, flags) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTINSERT, FAIL, "can't insert free space section into skip list") + sinfo_modified = TRUE; + HGOTO_DONE(TRUE) + } /* end if */ + } /* end else */ + +done: + /* Release the section info */ + if(sinfo_valid && H5FS_sinfo_unlock(f, dxpl_id, fspace, sinfo_modified) < 0) + HDONE_ERROR(H5E_FSPACE, H5E_CANTRELEASE, FAIL, "can't release section info") + + FUNC_LEAVE_NOAPI(ret_value) +} /* H5FS_sect_try_merge() */ + + +/*------------------------------------------------------------------------- * Function: H5FS_sect_find_node * * Purpose: Locate a section of free space (in existing free space list diff --git a/src/H5Fdeprec.c b/src/H5Fdeprec.c new file mode 100644 index 0000000..46d7979 --- /dev/null +++ b/src/H5Fdeprec.c @@ -0,0 +1,172 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the files COPYING and Copyright.html. COPYING can be found at the root * + * of the source code distribution tree; Copyright.html can be found at the * + * root level of an installed copy of the electronic HDF5 document set and * + * is linked from the top-level documents page. It can also be found at * + * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * + * access to either file, you may request a copy from help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +/*------------------------------------------------------------------------- + * + * Created: H5Fdeprec.c + * October 1 2009 + * Quincey Koziol <koziol@hdfgroup.org> + * + * Purpose: Deprecated functions from the H5F interface. These + * functions are here for compatibility purposes and may be + * removed in the future. Applications should switch to the + * newer APIs. + * + *------------------------------------------------------------------------- + */ + +/****************/ +/* Module Setup */ +/****************/ + +#define H5F_PACKAGE /*suppress error about including H5Fpkg */ + +/* Interface initialization */ +#define H5_INTERFACE_INIT_FUNC H5F_init_deprec_interface + + +/***********/ +/* Headers */ +/***********/ +#include "H5private.h" /* Generic Functions */ +#include "H5Eprivate.h" /* Error handling */ +#include "H5Fpkg.h" /* File access */ +#include "H5Iprivate.h" /* IDs */ + + +/****************/ +/* Local Macros */ +/****************/ + + +/******************/ +/* Local Typedefs */ +/******************/ + + +/********************/ +/* Package Typedefs */ +/********************/ + + +/********************/ +/* Local Prototypes */ +/********************/ + + +/*********************/ +/* Package Variables */ +/*********************/ + + +/*****************************/ +/* Library Private Variables */ +/*****************************/ + + +/*******************/ +/* Local Variables */ +/*******************/ + + + +/*-------------------------------------------------------------------------- +NAME + H5F_init_deprec_interface -- Initialize interface-specific information +USAGE + herr_t H5F_init_deprec_interface() +RETURNS + Non-negative on success/Negative on failure +DESCRIPTION + Initializes any interface-specific data or routines. (Just calls + H5F_init() currently). + +--------------------------------------------------------------------------*/ +static herr_t +H5F_init_deprec_interface(void) +{ + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5F_init_deprec_interface) + + FUNC_LEAVE_NOAPI(H5F_init()) +} /* H5F_init_deprec_interface() */ + +#ifndef H5_NO_DEPRECATED_SYMBOLS + +/*------------------------------------------------------------------------- + * Function: H5Fget_info1 + * + * Purpose: Gets general information about the file, including: + * 1. Get storage size for superblock extension if there is one. + * 2. Get the amount of btree and heap storage for entries + * in the SOHM table if there is one. + * 3. The amount of free space tracked in the file. + * + * Return: Success: non-negative on success + * Failure: Negative + * + * Programmer: Vailin Choi + * July 11, 2007 + * + *------------------------------------------------------------------------- + */ +herr_t +H5Fget_info1(hid_t obj_id, H5F_info1_t *finfo) +{ + H5F_t *f; /* Top file in mount hierarchy */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_API(H5Fget_info1, FAIL) + H5TRACE2("e", "i*x", obj_id, finfo); + + /* Check args */ + if(!finfo) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "no info struct") + + /* For file IDs, get the file object directly */ + /* (This prevents the H5G_loc() call from returning the file pointer for + * the top file in a mount hierarchy) + */ + if(H5I_get_type(obj_id) == H5I_FILE ) { + if(NULL == (f = (H5F_t *)H5I_object(obj_id))) + HGOTO_ERROR(H5E_ARGS, H5E_BADTYPE, FAIL, "not a file") + } /* end if */ + else { + H5G_loc_t loc; /* Object location */ + + /* Get symbol table entry */ + if(H5G_loc(obj_id, &loc) < 0) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "not a valid object ID") + f = loc.oloc->file; + } /* end else */ + HDassert(f->shared); + + /* Reset file info struct */ + HDmemset(finfo, 0, sizeof(*finfo)); + + /* Get the size of the superblock extension */ + if(H5F_super_size(f, H5AC_ind_dxpl_id, NULL, &finfo->super_ext_size) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve superblock extension size") + + /* Check for SOHM info */ + if(H5F_addr_defined(f->shared->sohm_addr)) + if(H5SM_ih_size(f, H5AC_ind_dxpl_id, &finfo->sohm.hdr_size, &finfo->sohm.msgs_info) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, FAIL, "Unable to retrieve SOHM index & heap storage info") + +done: + FUNC_LEAVE_API(ret_value) +} /* end H5Fget_info1() */ + +#endif /* H5_NO_DEPRECATED_SYMBOLS */ + diff --git a/src/H5Fpkg.h b/src/H5Fpkg.h index cf40a86..94a24df 100644 --- a/src/H5Fpkg.h +++ b/src/H5Fpkg.h @@ -69,7 +69,9 @@ #define H5F_FS_MERGE_RAWDATA 0x02 /* Section can merge with small 'raw' data aggregator */ /* Macro to abstract checking whether file is using a free space manager */ -#define H5F_HAVE_FREE_SPACE_MANAGER(F) TRUE /* Currently always have a free space manager */ +#define H5F_HAVE_FREE_SPACE_MANAGER(F) \ + ((F)->shared->fs_strategy == H5F_FILE_SPACE_ALL || \ + (F)->shared->fs_strategy == H5F_FILE_SPACE_ALL_PERSIST) /* Macros for encoding/decoding superblock */ #define H5F_MAX_DRVINFOBLOCK_SIZE 1024 /* Maximum size of superblock driver info buffer */ @@ -229,6 +231,8 @@ typedef struct H5F_file_t { H5RC_t *grp_btree_shared; /* Ref-counted group B-tree node info */ /* File space allocation information */ + H5F_file_space_type_t fs_strategy; /* File space handling strategy */ + hsize_t fs_threshold; /* Free space section threshold */ hbool_t use_tmp_space; /* Whether temp. file space allocation is allowed */ haddr_t tmp_addr; /* Next address to use for temp. space in the file */ unsigned fs_aggr_merge[H5FD_MEM_NTYPES]; /* Flags for whether free space can merge with aggregator(s) */ @@ -303,6 +307,7 @@ H5_DLL herr_t H5F_super_size(H5F_t *f, hid_t dxpl_id, hsize_t *super_size, hsize /* Superblock extension related routines */ H5_DLL herr_t H5F_super_ext_open(H5F_t *f, haddr_t ext_addr, H5O_loc_t *ext_ptr); H5_DLL herr_t H5F_super_ext_write_msg(H5F_t *f, hid_t dxpl_id, void *mesg, unsigned id, hbool_t may_create); +H5_DLL herr_t H5F_super_ext_remove_msg(H5F_t *f, hid_t dxpl_id, unsigned id); H5_DLL herr_t H5F_super_ext_close(H5F_t *f, H5O_loc_t *ext_ptr); /* Metadata accumulator routines */ diff --git a/src/H5Fprivate.h b/src/H5Fprivate.h index 574c4dc..8dae885 100644 --- a/src/H5Fprivate.h +++ b/src/H5Fprivate.h @@ -350,6 +350,8 @@ typedef struct H5F_blk_aggr_t H5F_blk_aggr_t; #define H5F_CRT_SHMSG_INDEX_MINSIZE_NAME "shmsg_message_minsize" /* Minimum size of messages in each index */ #define H5F_CRT_SHMSG_LIST_MAX_NAME "shmsg_list_max" /* Shared message list maximum size */ #define H5F_CRT_SHMSG_BTREE_MIN_NAME "shmsg_btree_min" /* Shared message B-tree minimum size */ +#define H5F_CRT_FILE_SPACE_STRATEGY_NAME "file_space_strategy" /* File space handling strategy */ +#define H5F_CRT_FREE_SPACE_THRESHOLD_NAME "free_space_threshold" /* Free space section threshold */ @@ -401,6 +403,11 @@ typedef struct H5F_blk_aggr_t H5F_blk_aggr_t; must compensate. -QAK */ +/* Default file space handling strategy */ +#define H5F_FILE_SPACE_STRATEGY_DEF H5F_FILE_SPACE_ALL +/* Default free space section threshold used by free-space managers */ +#define H5F_FREE_SPACE_THRESHOLD_DEF 1 + /* Macros to define signatures of all objects in the file */ /* Size of signature information (on disk) */ diff --git a/src/H5Fpublic.h b/src/H5Fpublic.h index 20814b6..a26c814 100644 --- a/src/H5Fpublic.h +++ b/src/H5Fpublic.h @@ -101,14 +101,23 @@ typedef enum H5F_close_degree_t { } H5F_close_degree_t; /* Current "global" information about file */ -/* (just size info currently) */ -typedef struct H5F_info_t { - hsize_t super_ext_size; /* Superblock extension size */ +typedef struct H5F_info2_t { + struct { + unsigned version; /* Superblock version # */ + hsize_t super_size; /* Superblock size */ + hsize_t super_ext_size; /* Superblock extension size */ + } super; + struct { + unsigned version; /* Version # of file free space management */ + hsize_t meta_size; /* Free space manager metadata size */ + hsize_t tot_space; /* Amount of free space in the file */ + } free; struct { + unsigned version; /* Version # of shared object header info */ hsize_t hdr_size; /* Shared object header message header size */ H5_ih_info_t msgs_info; /* Shared object header message index & heap size */ } sohm; -} H5F_info_t; +} H5F_info2_t; /* * Types of allocation requests. The values larger than H5FD_MEM_DEFAULT @@ -128,12 +137,30 @@ typedef enum H5F_mem_t { H5FD_MEM_NTYPES /*must be last*/ } H5F_mem_t; +/* Free space section information */ +typedef struct H5F_sect_info_t { + haddr_t addr; /* Address of free space section */ + hsize_t size; /* Size of free space section */ +} H5F_sect_info_t; + /* Library's file format versions */ typedef enum H5F_libver_t { H5F_LIBVER_EARLIEST, /* Use the earliest possible format for storing objects */ H5F_LIBVER_LATEST /* Use the latest possible format available for storing objects*/ } H5F_libver_t; +/* File space handling strategy */ +typedef enum H5F_file_space_type_t { + H5F_FILE_SPACE_DEFAULT = 0, /* Default (or current) free space strategy setting */ + H5F_FILE_SPACE_ALL_PERSIST = 1, /* Persistent free space managers, aggregators, virtual file driver */ + H5F_FILE_SPACE_ALL = 2, /* Non-persistent free space managers, aggregators, virtual file driver */ + /* This is the library default */ + H5F_FILE_SPACE_AGGR_VFD = 3, /* Aggregators, Virtual file driver */ + H5F_FILE_SPACE_VFD = 4, /* Virtual file driver */ + H5F_FILE_SPACE_NTYPES /* must be last */ +} H5F_file_space_type_t; + + #ifdef __cplusplus extern "C" { #endif @@ -169,7 +196,35 @@ H5_DLL herr_t H5Fget_mdc_size(hid_t file_id, int * cur_num_entries_ptr); H5_DLL herr_t H5Freset_mdc_hit_rate_stats(hid_t file_id); H5_DLL ssize_t H5Fget_name(hid_t obj_id, char *name, size_t size); -H5_DLL herr_t H5Fget_info(hid_t obj_id, H5F_info_t *bh_info); +H5_DLL herr_t H5Fget_info2(hid_t obj_id, H5F_info2_t *finfo); +H5_DLL ssize_t H5Fget_free_sections(hid_t file_id, H5F_mem_t type, + size_t nsects, H5F_sect_info_t *sect_info/*out*/); + +/* Symbols defined for compatibility with previous versions of the HDF5 API. + * + * Use of these symbols is deprecated. + */ +#ifndef H5_NO_DEPRECATED_SYMBOLS + +/* Macros */ + + +/* Typedefs */ + +/* Current "global" information about file */ +typedef struct H5F_info1_t { + hsize_t super_ext_size; /* Superblock extension size */ + struct { + hsize_t hdr_size; /* Shared object header message header size */ + H5_ih_info_t msgs_info; /* Shared object header message index & heap size */ + } sohm; +} H5F_info1_t; + + +/* Function prototypes */ +H5_DLL herr_t H5Fget_info1(hid_t obj_id, H5F_info1_t *finfo); + +#endif /* H5_NO_DEPRECATED_SYMBOLS */ #ifdef __cplusplus } diff --git a/src/H5Fsuper.c b/src/H5Fsuper.c index 9c12f15..c24cfa1 100644 --- a/src/H5Fsuper.c +++ b/src/H5Fsuper.c @@ -400,6 +400,12 @@ H5F_super_init(H5F_t *f, hid_t dxpl_id) /* Bump superblock version to create superblock extension for SOHM info */ else if(f->shared->sohm_nindexes > 0) super_vers = HDF5_SUPERBLOCK_VERSION_2; + /* Bump superblock version to create superblock extension for + * non-default file space strategy or non-default free-space threshold + */ + else if(f->shared->fs_strategy != H5F_FILE_SPACE_STRATEGY_DEF || + f->shared->fs_threshold != H5F_FREE_SPACE_THRESHOLD_DEF) + super_vers = HDF5_SUPERBLOCK_VERSION_2; /* Check for non-default indexed storage B-tree internal 'K' value * and set the version # of the superblock to 1 if it is a non-default * value. @@ -495,6 +501,12 @@ H5F_super_init(H5F_t *f, hid_t dxpl_id) HDassert(super_vers >= HDF5_SUPERBLOCK_VERSION_2); need_ext = TRUE; } /* end if */ + /* Files with non-default free space settings always need the superblock extension */ + else if(f->shared->fs_strategy != H5F_FILE_SPACE_STRATEGY_DEF || + f->shared->fs_threshold != H5F_FREE_SPACE_THRESHOLD_DEF) { + HDassert(super_vers >= HDF5_SUPERBLOCK_VERSION_2); + need_ext = TRUE; + } /* end if */ /* If we're going to use a version of the superblock format which allows * for the superblock extension, check for non-default values to store * in it. @@ -571,6 +583,18 @@ H5F_super_init(H5F_t *f, hid_t dxpl_id) HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "unable to update driver info header message") } /* end if */ + /* Check for non-default free space settings */ + if(f->shared->fs_strategy != H5F_FILE_SPACE_STRATEGY_DEF || + f->shared->fs_threshold != H5F_FREE_SPACE_THRESHOLD_DEF) { + H5O_fsinfo_t fsinfo; /* Free space manager info message */ + + /* Write free-space manager info message to superblock extension object header if needed */ + fsinfo.strategy = f->shared->fs_strategy; + fsinfo.threshold = f->shared->fs_threshold; + if(H5O_msg_create(&ext_loc, H5O_FSINFO_ID, H5O_MSG_FLAG_DONTSHARE, H5O_UPDATE_TIME, &fsinfo, dxpl_id) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTINIT, FAIL, "unable to update free-space info header message") + } /* end if */ + /* Close superblock extension */ if(H5F_super_ext_close(f, &ext_loc) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "unable to close file's superblock extension") @@ -769,3 +793,66 @@ done: FUNC_LEAVE_NOAPI(ret_value) } /* H5F_super_ext_write_msg() */ + +/*------------------------------------------------------------------------- + * Function: H5F_super_ext_remove_msg + * + * Purpose: Remove the message with ID from the superblock extension + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5F_super_ext_remove_msg(H5F_t *f, hid_t dxpl_id, unsigned id) +{ + htri_t status; /* Indicate whether the message exists or not */ + H5O_loc_t ext_loc; /* "Object location" for superblock extension */ + int null_count = 0; /* # of null messages */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_NOAPI(H5F_super_ext_remove_msg, FAIL) + + /* Make sure that the superblock extension object header exists */ + HDassert(H5F_addr_defined(f->shared->sblock->ext_addr)); + + /* Open superblock extension object header */ + if(H5F_super_ext_open(f, f->shared->sblock->ext_addr, &ext_loc) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "error in starting file's superblock extension") + + /* Check if message with ID exists in the object header */ + if((status = H5O_msg_exists(&ext_loc, id, dxpl_id)) < 0) + HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "unable to check object header for message") + else if(status) { /* message exists */ + H5O_hdr_info_t hdr_info; /* Object header info for superblock extension */ + + /* Remove the message */ + if(H5O_msg_remove(&ext_loc, id, H5O_ALL, TRUE, dxpl_id) < 0) + HGOTO_ERROR(H5E_OHDR, H5E_CANTDELETE, FAIL, "unable to delete free-space manager info message") + + /* Get info for the superblock extension's object header */ + if(H5O_get_hdr_info(&ext_loc, dxpl_id, &hdr_info) < 0) + HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, FAIL, "unable to retrieve superblock extension info") + + /* If the object header is an empty base chunk, remove superblock extension */ + if(hdr_info.nchunks == 1) { + if((null_count = H5O_msg_count(&ext_loc, H5O_NULL_ID, dxpl_id)) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTCOUNT, FAIL, "unable to count messages") + else if((unsigned)null_count == hdr_info.nmesgs) { + HDassert(H5F_addr_defined(ext_loc.addr)); + if(H5O_delete(f, dxpl_id, ext_loc.addr) < 0) + HGOTO_ERROR(H5E_SYM, H5E_CANTCOUNT, FAIL, "unable to count messages") + f->shared->sblock->ext_addr = HADDR_UNDEF; + } /* end if */ + } /* end if */ + } /* end if */ + + /* Close superblock extension object header */ + if(H5F_super_ext_close(f, &ext_loc) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, FAIL, "unable to close file's superblock extension") +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5F_super_ext_remove_msg() */ + diff --git a/src/H5Fsuper_cache.c b/src/H5Fsuper_cache.c index 39899f0..ada9e57 100644 --- a/src/H5Fsuper_cache.c +++ b/src/H5Fsuper_cache.c @@ -480,6 +480,7 @@ H5F_sblock_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void UNUSED *udata1 H5O_loc_t ext_loc; /* "Object location" for superblock extension */ H5O_btreek_t btreek; /* v1 B-tree 'K' value message from superblock extension */ H5O_drvinfo_t drvinfo; /* Driver info message from superblock extension */ + size_t u; /* Local index variable */ htri_t status; /* Status for message existing */ /* Sanity check - superblock extension should only be defined for @@ -564,6 +565,41 @@ H5F_sblock_load(H5F_t *f, hid_t dxpl_id, haddr_t addr, const void UNUSED *udata1 sblock->sym_leaf_k = H5F_CRT_SYM_LEAF_DEF; } /* end if */ + /* Check for the extension having a 'free-space manager info' message */ + if((status = H5O_msg_exists(&ext_loc, H5O_FSINFO_ID, dxpl_id)) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTGET, NULL, "unable to check object header") + if(status) { + H5O_fsinfo_t fsinfo; /* Free-space manager info message from superblock extension */ + + /* Retrieve the 'free-space manager info' structure */ + if(NULL == H5O_msg_read(&ext_loc, H5O_FSINFO_ID, &fsinfo, dxpl_id)) + HGOTO_ERROR(H5E_OHDR, H5E_CANTGET, NULL, "unable to get free-space manager info message") + + if(shared->fs_strategy != fsinfo.strategy) { + shared->fs_strategy = fsinfo.strategy; + + /* Set non-default strategy in the property list */ + if(H5P_set(c_plist, H5F_CRT_FILE_SPACE_STRATEGY_NAME, &fsinfo.strategy) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTSET, NULL, "unable to set file space strategy") + } /* end if */ + if(shared->fs_threshold != fsinfo.threshold) { + shared->fs_threshold = fsinfo.threshold; + + /* Set non-default threshold in the property list */ + if(H5P_set(c_plist, H5F_CRT_FREE_SPACE_THRESHOLD_NAME, &fsinfo.threshold) < 0) + HGOTO_ERROR(H5E_FILE, H5E_CANTSET, NULL, "unable to set file space strategy") + } /* end if */ + + /* set free-space manager addresses */ + shared->fs_addr[0] = HADDR_UNDEF; + for(u = 1; u < NELMTS(f->shared->fs_addr); u++) + shared->fs_addr[u] = fsinfo.fs_addr[u-1]; + } /* end if */ + else { + for(u = 0; u < NELMTS(f->shared->fs_addr); u++) + shared->fs_addr[u] = HADDR_UNDEF; + } /* end else */ + /* Close superblock extension */ if(H5F_super_ext_close(f, &ext_loc) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTRELEASE, NULL, "unable to close file's superblock extension") @@ -65,6 +65,13 @@ typedef enum { H5MF_AGGR_MERGE_TOGETHER /* Metadata & raw data in one free list */ } H5MF_aggr_merge_t; +/* User data for section info iterator callback for iterating over free space sections */ +typedef struct { + H5F_sect_info_t *sects; /* section info to be retrieved */ + size_t sect_count; /* # of sections requested */ + size_t sect_idx; /* the current count of sections */ +} H5MF_sect_iter_ud_t; + /********************/ /* Package Typedefs */ @@ -628,6 +635,12 @@ HDfprintf(stderr, "%s: Trying to avoid starting up free space manager\n", FUNC); else if(status > 0) /* Indicate success */ HGOTO_DONE(SUCCEED) + else if(size < f->shared->fs_threshold) { +#ifdef H5MF_ALLOC_DEBUG_MORE +HDfprintf(stderr, "%s: dropping addr = %a, size = %Hu, on the floor!\n", FUNC, addr, size); +#endif /* H5MF_ALLOC_DEBUG_MORE */ + HGOTO_DONE(SUCCEED) + } } /* end if */ /* If we are deleting the free space manager, leave now, to avoid @@ -654,7 +667,6 @@ HDfprintf(stderr, "%s: dropping addr = %a, size = %Hu, on the floor!\n", FUNC, a if(H5MF_alloc_start(f, dxpl_id, fs_type) < 0) HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, FAIL, "can't initialize file free space") } /* end if */ - HDassert(f->shared->fs_man[fs_type]); /* Create free space section for block */ if(NULL == (node = H5MF_sect_simple_new(addr, size))) @@ -666,16 +678,31 @@ HDfprintf(stderr, "%s: dropping addr = %a, size = %Hu, on the floor!\n", FUNC, a udata.alloc_type = alloc_type; udata.allow_sect_absorb = TRUE; - /* Add to the free space for the file */ + /* If size of section freed is larger than threshold, add it to the free space manager */ + if(size >= f->shared->fs_threshold) { + HDassert(f->shared->fs_man[fs_type]); + #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: Before H5FS_sect_add()\n", FUNC); #endif /* H5MF_ALLOC_DEBUG_MORE */ - if(H5FS_sect_add(f, dxpl_id, f->shared->fs_man[fs_type], (H5FS_section_info_t *)node, H5FS_ADD_RETURNED_SPACE, &udata) < 0) - HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINSERT, FAIL, "can't add section to file free space") - node = NULL; + /* Add to the free space for the file */ + if(H5FS_sect_add(f, dxpl_id, f->shared->fs_man[fs_type], (H5FS_section_info_t *)node, H5FS_ADD_RETURNED_SPACE, &udata) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINSERT, FAIL, "can't add section to file free space") + node = NULL; #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: After H5FS_sect_add()\n", FUNC); #endif /* H5MF_ALLOC_DEBUG_MORE */ + } /* end if */ + else { + htri_t merged; /* Whether node was merged */ + + /* Try to merge the section that is smaller than threshold */ + if((merged = H5FS_sect_try_merge(f, dxpl_id, f->shared->fs_man[fs_type], (H5FS_section_info_t *)node, H5FS_ADD_RETURNED_SPACE, &udata)) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINSERT, FAIL, "can't merge section to file free space") + else if(merged == TRUE) /* successfully merged */ + /* Indicate that the node was used */ + node = NULL; + } /* end else */ done: /* Release section node, if allocated and not added to section list or merged */ @@ -970,55 +997,147 @@ HDfprintf(stderr, "%s: Entering\n", FUNC); if(H5MF_free_aggrs(f, dxpl_id) < 0) HGOTO_ERROR(H5E_FILE, H5E_CANTFREE, FAIL, "can't free aggregators") - /* Iterate over all the free space types that have managers and get each free list's space */ - for(type = H5FD_MEM_DEFAULT; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) { + /* Making free-space managers persistent for superblock version >= 2 */ + if(f->shared->sblock->super_vers >= HDF5_SUPERBLOCK_VERSION_2 + && f->shared->fs_strategy == H5F_FILE_SPACE_ALL_PERSIST) { + H5O_fsinfo_t fsinfo; /* Free space manager info message */ + hbool_t update = FALSE; /* To update info for the message */ + + /* Check to remove free-space manager info message from superblock extension */ + if(H5F_addr_defined(f->shared->sblock->ext_addr)) + if(H5F_super_ext_remove_msg(f, dxpl_id, H5O_FSINFO_ID) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTRELEASE, FAIL, "error in removing message from superblock extension") + + /* Free free-space manager header and/or section info header */ + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) { + H5FS_stat_t fs_stat; /* Information for free-space manager */ + + /* Check for free space manager of this type */ + if(f->shared->fs_man[type]) { + /* Switch to "about to be deleted" state */ + f->shared->fs_state[type] = H5F_FS_STATE_DELETING; + + /* Query the free space manager's information */ + if(H5FS_stat_info(f, f->shared->fs_man[type], &fs_stat) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTGET, FAIL, "can't get free-space info") + + /* Check if the free space manager has space in the file */ + if(H5F_addr_defined(fs_stat.addr) || H5F_addr_defined(fs_stat.sect_addr)) { + /* Delete the free space manager in the file */ + /* (will re-allocate later) */ + if(H5FS_free(f, f->shared->fs_man[type], dxpl_id) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTRELEASE, FAIL, "can't release free-space headers") + f->shared->fs_addr[type] = HADDR_UNDEF; + } /* end if */ + } /* end iif */ + fsinfo.fs_addr[type-1] = HADDR_UNDEF; + } /* end for */ + + fsinfo.strategy = f->shared->fs_strategy; + fsinfo.threshold = f->shared->fs_threshold; + + /* Write free-space manager info message to superblock extension object header */ + /* Create the superblock extension object header in advance if needed */ + if(H5F_super_ext_write_msg(f, dxpl_id, &fsinfo, H5O_FSINFO_ID, TRUE) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_WRITEERROR, FAIL, "error in writing message to superblock extension") + + /* Re-allocate free-space manager header and/or section info header */ + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) { + H5FS_stat_t fs_stat; /* Information for free-space manager */ + + /* Check for active free space manager of this type */ + if(f->shared->fs_man[type]) { + /* Re-query free space manager info for this type */ + if(H5FS_stat_info(f, f->shared->fs_man[type], &fs_stat) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTRELEASE, FAIL, "can't get free-space info") + + /* Are there sections to persist? */ + if(fs_stat.serial_sect_count) { + /* Allocate space for free-space manager header */ + if(H5FS_alloc_hdr(f, f->shared->fs_man[type], &f->shared->fs_addr[type], dxpl_id) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_NOSPACE, FAIL, "can't allocated free-space header") + + /* Allocate space for free-space maanger section info header */ + if(H5FS_alloc_sect(f, f->shared->fs_man[type], dxpl_id) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, FAIL, "can't allocate free-space section info") + + HDassert(f->shared->fs_addr[type]); + fsinfo.fs_addr[type-1] = f->shared->fs_addr[type]; + update = TRUE; + } /* end if */ + } else if(H5F_addr_defined(f->shared->fs_addr[type])) { + fsinfo.fs_addr[type-1] = f->shared->fs_addr[type]; + update = TRUE; + } /* end else-if */ + } /* end for */ + + /* Update the free space manager info message in superblock extension object header */ + if(update) + if(H5F_super_ext_write_msg(f, dxpl_id, &fsinfo, H5O_FSINFO_ID, FALSE) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_WRITEERROR, FAIL, "error in writing message to superblock extension") + + /* Final close of free-space managers */ + for(type = H5FD_MEM_DEFAULT; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) { + if(f->shared->fs_man[type]) { + if(H5FS_close(f, dxpl_id, f->shared->fs_man[type]) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTRELEASE, FAIL, "can't close free space manager") + f->shared->fs_man[type] = NULL; + f->shared->fs_state[type] = H5F_FS_STATE_CLOSED; + } /* end if */ + f->shared->fs_addr[type] = HADDR_UNDEF; + } /* end for */ + } /* end if */ + else { /* super_vers can be 0, 1, 2 */ + /* Iterate over all the free space types that have managers and get each free list's space */ + for(type = H5FD_MEM_DEFAULT; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) { #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: Check 1.0 - f->shared->fs_man[%u] = %p, f->shared->fs_addr[%u] = %a\n", FUNC, (unsigned)type, f->shared->fs_man[type], (unsigned)type, f->shared->fs_addr[type]); #endif /* H5MF_ALLOC_DEBUG_MORE */ - /* If the free space manager for this type is open, close it */ - if(f->shared->fs_man[type]) { + /* If the free space manager for this type is open, close it */ + if(f->shared->fs_man[type]) { #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: Before closing free space manager\n", FUNC); #endif /* H5MF_ALLOC_DEBUG_MORE */ - if(H5FS_close(f, dxpl_id, f->shared->fs_man[type]) < 0) - HGOTO_ERROR(H5E_FSPACE, H5E_CANTRELEASE, FAIL, "can't release free space info") - f->shared->fs_man[type] = NULL; - f->shared->fs_state[type] = H5F_FS_STATE_CLOSED; - } /* end if */ + if(H5FS_close(f, dxpl_id, f->shared->fs_man[type]) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTRELEASE, FAIL, "can't release free space info") + f->shared->fs_man[type] = NULL; + f->shared->fs_state[type] = H5F_FS_STATE_CLOSED; + } /* end if */ #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: Check 2.0 - f->shared->fs_man[%u] = %p, f->shared->fs_addr[%u] = %a\n", FUNC, (unsigned)type, f->shared->fs_man[type], (unsigned)type, f->shared->fs_addr[type]); #endif /* H5MF_ALLOC_DEBUG_MORE */ - /* If there is free space manager info for this type, delete it */ - /* (XXX: Make this optional when free space for a file can be persistant) */ - if(H5F_addr_defined(f->shared->fs_addr[type])) { - haddr_t tmp_fs_addr; /* Temporary holder for free space manager address */ + /* If there is free space manager info for this type, delete it */ + if(H5F_addr_defined(f->shared->fs_addr[type])) { + haddr_t tmp_fs_addr; /* Temporary holder for free space manager address */ - /* Put address into temporary variable and reset it */ - /* (Avoids loopback in file space freeing routine) */ - tmp_fs_addr = f->shared->fs_addr[type]; - f->shared->fs_addr[type] = HADDR_UNDEF; + /* Put address into temporary variable and reset it */ + /* (Avoids loopback in file space freeing routine) */ + tmp_fs_addr = f->shared->fs_addr[type]; + f->shared->fs_addr[type] = HADDR_UNDEF; - /* Shift to "deleting" state, to make certain we don't track any - * file space freed as a result of deleting the free space manager. - */ - f->shared->fs_state[type] = H5F_FS_STATE_DELETING; + /* Shift to "deleting" state, to make certain we don't track any + * file space freed as a result of deleting the free space manager. + */ + f->shared->fs_state[type] = H5F_FS_STATE_DELETING; #ifdef H5MF_ALLOC_DEBUG_MORE HDfprintf(stderr, "%s: Before deleting free space manager\n", FUNC); #endif /* H5MF_ALLOC_DEBUG_MORE */ - /* Delete free space manager for this type */ - if(H5FS_delete(f, dxpl_id, tmp_fs_addr) < 0) - HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "can't delete free space manager") - /* Shift [back] to closed state */ - HDassert(f->shared->fs_state[type] == H5F_FS_STATE_DELETING); - f->shared->fs_state[type] = H5F_FS_STATE_CLOSED; + /* Delete free space manager for this type */ + if(H5FS_delete(f, dxpl_id, tmp_fs_addr) < 0) + HGOTO_ERROR(H5E_FSPACE, H5E_CANTFREE, FAIL, "can't delete free space manager") - /* Sanity check that the free space manager for this type wasn't started up again */ - HDassert(!H5F_addr_defined(f->shared->fs_addr[type])); - } /* end if */ - } /* end for */ + /* Shift [back] to closed state */ + HDassert(f->shared->fs_state[type] == H5F_FS_STATE_DELETING); + f->shared->fs_state[type] = H5F_FS_STATE_CLOSED; + + /* Sanity check that the free space manager for this type wasn't started up again */ + HDassert(!H5F_addr_defined(f->shared->fs_addr[type])); + } /* end if */ + } /* end for */ + } /* end else */ /* Free the space in aggregators (again) */ /* (in case any free space information re-started them) */ @@ -1032,3 +1151,126 @@ HDfprintf(stderr, "%s: Leaving\n", FUNC); FUNC_LEAVE_NOAPI(ret_value) } /* end H5MF_close() */ + +/*------------------------------------------------------------------------- + * Function: H5MF_sects_cb() + * + * Purpose: Iterator callback for each free-space section + * Retrieve address and size into user data + * + * Return: Always succeed + * + * Programmer: Vailin Choi + * July 1st, 2009 + * + *------------------------------------------------------------------------- + */ +static herr_t +H5MF_sects_cb(const H5FS_section_info_t *_sect, void *_udata) +{ + const H5MF_free_section_t *sect = (const H5MF_free_section_t *)_sect; + H5MF_sect_iter_ud_t *udata = (H5MF_sect_iter_ud_t *)_udata; + + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5MF_sects_cb) + + if(udata->sect_idx < udata->sect_count) { + udata->sects[udata->sect_idx].addr = sect->sect_info.addr; + udata->sects[udata->sect_idx].size = sect->sect_info.size; + udata->sect_idx++; + } /* end if */ + + FUNC_LEAVE_NOAPI(SUCCEED) +} /* H5MF_sects_cb() */ + + +/*------------------------------------------------------------------------- + * Function: H5MF_get_free_sections() + * + * Purpose: To iterate over one or all free-space managers for: + * # of sections + * section info as defined in H5F_sect_info_t + * + * Return: SUCCEED/FAIL + * + * Programmer: Vailin Choi + * July 1st, 2009 + * + *------------------------------------------------------------------------- + */ +ssize_t +H5MF_get_free_sections(H5F_t *f, hid_t dxpl_id, H5FD_mem_t type, size_t nsects, H5F_sect_info_t *sect_info) +{ + size_t total_sects = 0; /* total number of sections */ + H5MF_sect_iter_ud_t sect_udata; /* User data for callback */ + H5FD_mem_t start_type, end_type; /* Memory types to iterate over */ + H5FD_mem_t ty; /* Memory type for iteration */ + ssize_t ret_value; /* Return value */ + + FUNC_ENTER_NOAPI(H5MF_get_free_sections, FAIL) + + /* check args */ + HDassert(f); + HDassert(f->shared); + HDassert(f->shared->lf); + + /* Determine start/end points for loop */ + if(type == H5FD_MEM_DEFAULT) { + start_type = H5FD_MEM_SUPER; + end_type = H5FD_MEM_NTYPES; + } /* end if */ + else { + start_type = end_type = type; + H5_INC_ENUM(H5FD_mem_t, end_type); + } /* end else */ + + /* Set up user data for section iteration */ + sect_udata.sects = sect_info; + sect_udata.sect_count = nsects; + sect_udata.sect_idx = 0; + + /* Iterate over memory types, retrieving the number of sections of each type */ + for(ty = start_type; ty < end_type; H5_INC_ENUM(H5FD_mem_t, ty)) { + hbool_t fs_started = FALSE; + + /* Open free space manager of this type, if it isn't already */ + if(!f->shared->fs_man[ty] && H5F_addr_defined(f->shared->fs_addr[ty])) { + if(H5MF_alloc_open(f, dxpl_id, ty) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTOPENOBJ, FAIL, "can't initialize file free space") + HDassert(f->shared->fs_man[ty]); + fs_started = TRUE; + } /* end if */ + + /* Check if f there's free space sections of this type */ + if(f->shared->fs_man[ty]) { + hsize_t hnums = 0; /* Total # of sections */ + size_t nums; /* Total # of sections, cast to a size_t */ + + /* Query how many sections of this type */ + if(H5FS_sect_stats(f->shared->fs_man[ty], NULL, &hnums) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTGET, FAIL, "can't query free space stats") + H5_ASSIGN_OVERFLOW(nums, hnums, hsize_t, size_t); + + /* Increment total # of sections */ + total_sects += nums; + + /* Check if we should retrieve the section info */ + if(sect_info && nums > 0) { + /* Iterate over all the free space sections of this type, adding them to the user's section info */ + if(H5FS_sect_iterate(f, dxpl_id, f->shared->fs_man[ty], H5MF_sects_cb, §_udata) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_BADITER, FAIL, "can't iterate over sections") + } /* end if */ + } /* end if */ + + /* Close the free space manager of this type, if we started it here */ + if(fs_started) + if(H5MF_alloc_close(f, dxpl_id, ty) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTCLOSEOBJ, FAIL, "can't close file free space") + } /* end for */ + + /* Set return value */ + ret_value = (ssize_t)total_sects; + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5MF_get_free_sections() */ + diff --git a/src/H5MFaggr.c b/src/H5MFaggr.c index aa982da..db13408 100644 --- a/src/H5MFaggr.c +++ b/src/H5MFaggr.c @@ -177,11 +177,11 @@ HDfprintf(stderr, "%s: type = %u, size = %Hu\n", FUNC, (unsigned)type, size); HGOTO_ERROR(H5E_RESOURCE, H5E_CANTGET, HADDR_UNDEF, "Unable to get eoa") /* - * If the aggregation feature is enabled for this file, allocate "generic" - * space and sub-allocate out of that, if possible. Otherwise just allocate - * through H5FD_alloc() + * If the aggregation feature is enabled for this file and strategy is not H5F_FILE_SPACE_VFD, + * allocate "generic" space and sub-allocate out of that, if possible. + * Otherwise just allocate through H5FD_alloc(). */ - if(f->shared->feature_flags & aggr->feature_flag) { + if((f->shared->feature_flags & aggr->feature_flag) && f->shared->fs_strategy != H5F_FILE_SPACE_VFD) { haddr_t aggr_frag_addr = HADDR_UNDEF; /* Address of aggregrator fragment */ hsize_t aggr_frag_size = 0; /* Size of aggregator fragment */ hsize_t alignment; /* Alignment of this section */ diff --git a/src/H5MFdbg.c b/src/H5MFdbg.c index ca87c83..31cff15 100644 --- a/src/H5MFdbg.c +++ b/src/H5MFdbg.c @@ -41,7 +41,6 @@ #include "H5Fpkg.h" /* File access */ #include "H5MFpkg.h" /* File memory management */ -#ifdef H5MF_ALLOC_DEBUG_DUMP /****************/ /* Local Macros */ @@ -139,6 +138,67 @@ done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5MF_sects_debug_cb() */ + +/*------------------------------------------------------------------------- + * Function: H5MF_sects_debug + * + * Purpose: Iterate over free space sections for a file + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Quincey Koziol + * koziol@hdfgroup.org + * January 31 2008 + * + *------------------------------------------------------------------------- + */ +herr_t +H5MF_sects_debug(H5F_t *f, hid_t dxpl_id, haddr_t fs_addr, FILE *stream, int indent, int fwidth) +{ + herr_t ret_value = SUCCEED; /* Return value */ + H5FD_mem_t type; /* Memory type for iteration */ + + FUNC_ENTER_NOAPI(H5MF_sects_debug, FAIL) + + /* + * Check arguments. + */ + HDassert(f); + HDassert(stream); + HDassert(indent >= 0); + HDassert(fwidth >= 0); + + for(type = H5FD_MEM_DEFAULT; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) + if(H5F_addr_eq(f->shared->fs_addr[type], fs_addr)) { + if(!f->shared->fs_man[type]) + if(H5MF_alloc_open(f, dxpl_id, type) < 0) + HGOTO_ERROR(H5E_RESOURCE, H5E_CANTINIT, FAIL, "can't initialize file free space") + + if(f->shared->fs_man[type]) { + H5MF_debug_iter_ud_t udata; /* User data for callbacks */ + + /* Prepare user data for section iteration callback */ + udata.fspace = f->shared->fs_man[type]; + udata.stream = stream; + udata.indent = indent; + udata.fwidth = fwidth; + + /* Iterate over all the free space sections */ + if(H5FS_sect_iterate(f, dxpl_id, f->shared->fs_man[type], H5MF_sects_debug_cb, &udata) < 0) + HGOTO_ERROR(H5E_HEAP, H5E_BADITER, FAIL, "can't iterate over heap's free space") + + /* Close the free space information */ + if(H5FS_close(f, dxpl_id, f->shared->fs_man[type]) < 0) + HGOTO_ERROR(H5E_HEAP, H5E_CANTRELEASE, FAIL, "can't release free space info") + } /* end if */ + break; + } + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* H5MF_sects_debug() */ + +#ifdef H5MF_ALLOC_DEBUG_DUMP /*------------------------------------------------------------------------- * Function: H5MF_sects_dump diff --git a/src/H5MFprivate.h b/src/H5MFprivate.h index 3f2a427..b471aa3 100644 --- a/src/H5MFprivate.h +++ b/src/H5MFprivate.h @@ -73,6 +73,8 @@ H5_DLL herr_t H5MF_try_extend(H5F_t *f, hid_t dxpl_id, H5FD_mem_t type, haddr_t addr, hsize_t size, hsize_t extra_requested); H5_DLL htri_t H5MF_try_shrink(H5F_t *f, H5FD_mem_t alloc_type, hid_t dxpl_id, haddr_t addr, hsize_t size); +H5_DLL ssize_t H5MF_get_free_sections(H5F_t *f, hid_t dxpl_id, H5FD_mem_t type, + size_t nsects, H5F_sect_info_t *sect_info); /* File 'temporary' space allocation routines */ H5_DLL haddr_t H5MF_alloc_tmp(H5F_t *f, hsize_t size); @@ -82,10 +84,8 @@ H5_DLL herr_t H5MF_free_aggrs(H5F_t *f, hid_t dxpl_id); /* Debugging routines */ #ifdef H5MF_DEBUGGING -#ifdef NOT_YET H5_DLL herr_t H5MF_sects_debug(H5F_t *f, hid_t dxpl_id, haddr_t addr, FILE *stream, int indent, int fwidth); -#endif /* NOT_YET */ #endif /* H5MF_DEBUGGING */ #endif /* end _H5MFprivate_H */ @@ -126,6 +126,7 @@ const H5O_msg_class_t *const H5O_msg_class_g[] = { H5O_MSG_AINFO, /*0x0015 Attribute information */ H5O_MSG_REFCOUNT, /*0x0016 Object's ref. count */ H5O_MSG_UNKNOWN, /*0x0017 Placeholder for unknown message */ + H5O_MSG_FSINFO, /*0x0018 Free-space manager info message */ }; /* Declare a free list to manage the H5O_t struct */ diff --git a/src/H5Ofsinfo.c b/src/H5Ofsinfo.c new file mode 100644 index 0000000..fb0151f --- /dev/null +++ b/src/H5Ofsinfo.c @@ -0,0 +1,309 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the files COPYING and Copyright.html. COPYING can be found at the root * + * of the source code distribution tree; Copyright.html can be found at the * + * root level of an installed copy of the electronic HDF5 document set and * + * is linked from the top-level documents page. It can also be found at * + * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have * + * access to either file, you may request a copy from help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ + +/*------------------------------------------------------------------------- + * + * Created: H5Ofsinfo.c + * Feb 2009 + * Vailin Choi + * + * Purpose: Free space manager info message. + * + *------------------------------------------------------------------------- + */ + +#define H5O_PACKAGE /* suppress error about including H5Opkg */ + +#include "H5private.h" /* Generic Functions */ +#include "H5Eprivate.h" /* Error handling */ +#include "H5FLprivate.h" /* Free lists */ +#include "H5Opkg.h" /* Object headers */ + +/* PRIVATE PROTOTYPES */ +static void *H5O_fsinfo_decode(H5F_t *f, hid_t dxpl_id, H5O_t *open_oh, unsigned mesg_flags, unsigned *ioflags, const uint8_t *p); +static herr_t H5O_fsinfo_encode(H5F_t *f, hbool_t disable_shared, uint8_t *p, const void *_mesg); +static void *H5O_fsinfo_copy(const void *_mesg, void *_dest); +static size_t H5O_fsinfo_size(const H5F_t *f, hbool_t disable_shared, const void *_mesg); +static herr_t H5O_fsinfo_free(void *mesg); +static herr_t H5O_fsinfo_debug(H5F_t *f, hid_t dxpl_id, const void *_mesg, + FILE * stream, int indent, int fwidth); + +/* This message derives from H5O message class */ +const H5O_msg_class_t H5O_MSG_FSINFO[1] = {{ + H5O_FSINFO_ID, /* message id number */ + "fsinfo", /* message name for debugging */ + sizeof(H5O_fsinfo_t), /* native message size */ + 0, /* messages are sharable? */ + H5O_fsinfo_decode, /* decode message */ + H5O_fsinfo_encode, /* encode message */ + H5O_fsinfo_copy, /* copy the native value */ + H5O_fsinfo_size, /* size of free-space manager info message */ + NULL, /* default reset method */ + H5O_fsinfo_free, /* free method */ + NULL, /* file delete method */ + NULL, /* link method */ + NULL, /* set share method */ + NULL, /* can share method */ + NULL, /* pre copy native value to file */ + NULL, /* copy native value to file */ + NULL, /* post copy native value to file */ + NULL, /* get creation index */ + NULL, /* set creation index */ + H5O_fsinfo_debug /* debug the message */ +}}; + +/* Current version of free-space manager info information */ +#define H5O_FSINFO_VERSION 0 + +/* Declare a free list to manage the H5O_fsinfo_t struct */ +H5FL_DEFINE_STATIC(H5O_fsinfo_t); + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_decode + * + * Purpose: Decode a message and return a pointer to a newly allocated one. + * + * Return: Success: Ptr to new message in native form. + * Failure: NULL + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static void * +H5O_fsinfo_decode(H5F_t *f, hid_t UNUSED dxpl_id, H5O_t UNUSED *open_oh, + unsigned UNUSED mesg_flags, unsigned UNUSED *ioflags, const uint8_t *p) +{ + H5O_fsinfo_t *fsinfo = NULL; /* free-space manager info */ + H5FD_mem_t type; /* Memory type for iteration */ + void *ret_value; /* Return value */ + + FUNC_ENTER_NOAPI_NOINIT(H5O_fsinfo_decode) + + /* check args */ + HDassert(f); + HDassert(p); + + /* Version of message */ + if(*p++ != H5O_FSINFO_VERSION) + HGOTO_ERROR(H5E_OHDR, H5E_CANTLOAD, NULL, "bad version number for message") + + /* Allocate space for message */ + if(NULL == (fsinfo = H5FL_CALLOC(H5O_fsinfo_t))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") + + fsinfo->strategy = *p++; /* file space strategy */ + H5F_DECODE_LENGTH(f, p, fsinfo->threshold); /* free space section size threshold */ + + /* Addresses of free space managers: only exist for H5F_FILE_SPACE_ALL_PERSIST */ + if(fsinfo->strategy == H5F_FILE_SPACE_ALL_PERSIST) { + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) + H5F_addr_decode(f, &p, &(fsinfo->fs_addr[type-1])); + } /* end if */ + else { + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) + fsinfo->fs_addr[type-1] = HADDR_UNDEF; + } /* end else */ + + /* Set return value */ + ret_value = fsinfo; + +done: + if(ret_value == NULL && fsinfo != NULL) + fsinfo = H5FL_FREE(H5O_fsinfo_t, fsinfo); + + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5O_fsinfo_decode() */ + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_encode + * + * Purpose: Encodes a message. + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static herr_t +H5O_fsinfo_encode(H5F_t *f, hbool_t UNUSED disable_shared, uint8_t *p, const void *_mesg) +{ + const H5O_fsinfo_t *fsinfo = (const H5O_fsinfo_t *)_mesg; + H5FD_mem_t type; /* Memory type for iteration */ + + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_fsinfo_encode) + + /* check args */ + HDassert(f); + HDassert(p); + HDassert(fsinfo); + + *p++ = H5O_FSINFO_VERSION; /* message version */ + *p++ = fsinfo->strategy; /* file space strategy */ + H5F_ENCODE_LENGTH(f, p, fsinfo->threshold); /* free-space section size threshold */ + + /* Addresses of free space managers: only exist for H5F_FILE_SPACE_ALL_PERSIST */ + if(fsinfo->strategy == H5F_FILE_SPACE_ALL_PERSIST) { + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) + H5F_addr_encode(f, &p, fsinfo->fs_addr[type-1]); + } /* end if */ + + FUNC_LEAVE_NOAPI(SUCCEED) +} /* end H5O_fsinfo_encode() */ + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_copy + * + * Purpose: Copies a message from _MESG to _DEST, allocating _DEST if + * necessary. + * + * Return: Success: Ptr to _DEST + * Failure: NULL + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static void * +H5O_fsinfo_copy(const void *_mesg, void *_dest) +{ + const H5O_fsinfo_t *fsinfo = (const H5O_fsinfo_t *)_mesg; + H5O_fsinfo_t *dest = (H5O_fsinfo_t *) _dest; + void *ret_value; /* Return value */ + + FUNC_ENTER_NOAPI_NOINIT(H5O_fsinfo_copy) + + /* check args */ + HDassert(fsinfo); + if(!dest && NULL == (dest = H5FL_CALLOC(H5O_fsinfo_t))) + HGOTO_ERROR(H5E_RESOURCE, H5E_NOSPACE, NULL, "memory allocation failed") + + /* copy */ + *dest = *fsinfo; + + /* Set return value */ + ret_value = dest; + +done: + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5O_fsinfo_copy() */ + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_size + * + * Purpose: Returns the size of the raw message in bytes not counting + * the message type or size fields, but only the data fields. + * This function doesn't take into account alignment. + * + * Return: Success: Message data size in bytes without alignment. + * Failure: zero + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static size_t +H5O_fsinfo_size(const H5F_t *f, hbool_t UNUSED disable_shared, const void *_mesg) +{ + const H5O_fsinfo_t *fsinfo = (const H5O_fsinfo_t *)_mesg; + size_t fs_addr_size = 0; + size_t ret_value; /* Return value */ + + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_fsinfo_size) + + + /* Addresses of free-space managers exist only for H5F_FILE_SPACE_ALL_PERSIST type */ + if(H5F_FILE_SPACE_ALL_PERSIST == fsinfo->strategy) + fs_addr_size = (H5FD_MEM_NTYPES - 1) * H5F_SIZEOF_ADDR(f); + + ret_value = 2 /* Version & strategy */ + + H5F_SIZEOF_SIZE(f) /* Threshold */ + + fs_addr_size; /* Addresses of free-space managers */ + + FUNC_LEAVE_NOAPI(ret_value) +} /* end H5O_fsinfo_size() */ + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_free + * + * Purpose: Free's the message + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static herr_t +H5O_fsinfo_free(void *mesg) +{ + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_fsinfo_free) + + HDassert(mesg); + + (void)H5FL_FREE(H5O_fsinfo_t, mesg); + + FUNC_LEAVE_NOAPI(SUCCEED) +} /* end H5O_fsinfo_free() */ + + +/*------------------------------------------------------------------------- + * Function: H5O_fsinfo_debug + * + * Purpose: Prints debugging info for a message. + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; Feb 2009 + * + *------------------------------------------------------------------------- + */ +static herr_t +H5O_fsinfo_debug(H5F_t UNUSED *f, hid_t UNUSED dxpl_id, const void *_mesg, FILE * stream, + int indent, int fwidth) +{ + const H5O_fsinfo_t *fsinfo = (const H5O_fsinfo_t *) _mesg; + H5FD_mem_t type; /* Memory type for iteration */ + + FUNC_ENTER_NOAPI_NOINIT_NOFUNC(H5O_fsinfo_debug) + + /* check args */ + HDassert(f); + HDassert(fsinfo); + HDassert(stream); + HDassert(indent >= 0); + HDassert(fwidth >= 0); + + HDfprintf(stream, "%*s%-*s %u\n", indent, "", fwidth, + "File space strategy:", fsinfo->strategy); + + HDfprintf(stream, "%*s%-*s %Hu\n", indent, "", fwidth, + "Free space section threshold:", fsinfo->threshold); + + if(fsinfo->strategy == H5F_FILE_SPACE_ALL_PERSIST) { + for(type = H5FD_MEM_SUPER; type < H5FD_MEM_NTYPES; H5_INC_ENUM(H5FD_mem_t, type)) + HDfprintf(stream, "%*s%-*s %a\n", indent, "", fwidth, + "Free space manager address:", fsinfo->fs_addr[type-1]); + } /* end if */ + + FUNC_LEAVE_NOAPI(SUCCEED) +} /* end H5O_fsinfo_debug() */ + diff --git a/src/H5Opkg.h b/src/H5Opkg.h index e0a0971..3cae227 100644 --- a/src/H5Opkg.h +++ b/src/H5Opkg.h @@ -30,7 +30,7 @@ #define H5O_NMESGS 8 /*initial number of messages */ #define H5O_NCHUNKS 2 /*initial number of chunks */ #define H5O_MIN_SIZE 22 /* Min. obj header data size (must be big enough for a message prefix and a continuation message) */ -#define H5O_MSG_TYPES 24 /* # of types of messages */ +#define H5O_MSG_TYPES 25 /* # of types of messages */ #define H5O_MAX_CRT_ORDER_IDX 65535 /* Max. creation order index value */ /* Versions of object header structure */ @@ -452,6 +452,8 @@ H5_DLLVAR const H5O_msg_class_t H5O_MSG_REFCOUNT[1]; /* Placeholder for unknown message. (0x0017) */ H5_DLLVAR const H5O_msg_class_t H5O_MSG_UNKNOWN[1]; +/* Free-space Manager Info message. (0x0018) */ +H5_DLLVAR const H5O_msg_class_t H5O_MSG_FSINFO[1]; /* * Object header "object" types diff --git a/src/H5Oprivate.h b/src/H5Oprivate.h index 74b9754..a47a40d 100644 --- a/src/H5Oprivate.h +++ b/src/H5Oprivate.h @@ -167,6 +167,7 @@ typedef struct H5O_copy_t { #define H5O_REFCOUNT_ID 0x0016 /* Reference count message. */ #define H5O_UNKNOWN_ID 0x0017 /* Placeholder message ID for unknown message. */ /* (this should never exist in a file) */ +#define H5O_FSINFO_ID 0x0018 /* Free-space manager info message. */ /* Shared object message types. @@ -551,6 +552,17 @@ typedef uint32_t H5O_refcount_t; /* Contains # of links to object, if >1 */ typedef unsigned H5O_unknown_t; /* Original message type ID */ +/* + * Free space manager info Message. + * Contains file space management info and + * addresses of free space managers for file memory + * (Data structure in memory) + */ +typedef struct H5O_fsinfo_t { + H5F_file_space_type_t strategy; /* File space strategy */ + hsize_t threshold; /* Free space section threshold */ + haddr_t fs_addr[H5FD_MEM_NTYPES-1]; /* Addresses of free space managers */ +} H5O_fsinfo_t; /* Typedef for "application" iteration operations */ typedef herr_t (*H5O_operator_t)(const void *mesg/*in*/, unsigned idx, diff --git a/src/H5Pdeprec.c b/src/H5Pdeprec.c index 208fcb2..5c72247 100644 --- a/src/H5Pdeprec.c +++ b/src/H5Pdeprec.c @@ -440,5 +440,59 @@ H5Pinsert1(hid_t plist_id, const char *name, size_t size, void *value, done: FUNC_LEAVE_API(ret_value); } /* H5Pinsert1() */ + + +/*------------------------------------------------------------------------- + * Function: H5Pget_version + * + * Purpose: Retrieves version information for various parts of a file. + * + * SUPER: The file super block. + * FREELIST: The global free list. + * STAB: The root symbol table entry. + * SHHDR: Shared object headers. + * + * Any (or even all) of the output arguments can be null + * pointers. + * + * Return: Success: Non-negative, version information is returned + * through the arguments. + * + * Failure: Negative + * + * Programmer: Robb Matzke + * Wednesday, January 7, 1998 + * + *------------------------------------------------------------------------- + */ +herr_t +H5Pget_version(hid_t plist_id, unsigned *super/*out*/, unsigned *freelist/*out*/, + unsigned *stab/*out*/, unsigned *shhdr/*out*/) +{ + H5P_genplist_t *plist; /* Property list pointer */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_API(H5Pget_version, FAIL) + H5TRACE5("e", "ixxxx", plist_id, super, freelist, stab, shhdr); + + /* Get the plist structure */ + if(NULL == (plist = H5P_object_verify(plist_id,H5P_FILE_CREATE))) + HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") + + /* Get values */ + if(super) + if(H5P_get(plist, H5F_CRT_SUPER_VERS_NAME, super) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get superblock version") + if(freelist) + *freelist = HDF5_FREESPACE_VERSION; /* (hard-wired) */ + if(stab) + *stab = HDF5_OBJECTDIR_VERSION; /* (hard-wired) */ + if(shhdr) + *shhdr = HDF5_SHAREDHEADER_VERSION; /* (hard-wired) */ + +done: + FUNC_LEAVE_API(ret_value) +} /* end H5Pget_version() */ + #endif /* H5_NO_DEPRECATED_SYMBOLS */ diff --git a/src/H5Pfcpl.c b/src/H5Pfcpl.c index 406dbe1..0653c46 100644 --- a/src/H5Pfcpl.c +++ b/src/H5Pfcpl.c @@ -75,6 +75,11 @@ #define H5F_CRT_SHMSG_LIST_MAX_DEF (50) #define H5F_CRT_SHMSG_BTREE_MIN_SIZE sizeof(unsigned) #define H5F_CRT_SHMSG_BTREE_MIN_DEF (40) +/* Definitions for file space handling strategy */ +#define H5F_CRT_FILE_SPACE_STRATEGY_SIZE sizeof(unsigned) +#define H5F_CRT_FILE_SPACE_STRATEGY_DEF H5F_FILE_SPACE_STRATEGY_DEF +#define H5F_CRT_FREE_SPACE_THRESHOLD_SIZE sizeof(hsize_t) +#define H5F_CRT_FREE_SPACE_THRESHOLD_DEF H5F_FREE_SPACE_THRESHOLD_DEF /******************/ @@ -150,6 +155,8 @@ H5P_fcrt_reg_prop(H5P_genclass_t *pclass) unsigned sohm_index_minsizes[H5O_SHMESG_MAX_NINDEXES] = H5F_CRT_SHMSG_INDEX_MINSIZE_DEF; unsigned sohm_list_max = H5F_CRT_SHMSG_LIST_MAX_DEF; unsigned sohm_btree_min = H5F_CRT_SHMSG_BTREE_MIN_DEF; + unsigned file_space_strategy = H5F_CRT_FILE_SPACE_STRATEGY_DEF; + hsize_t free_space_threshold = H5F_CRT_FREE_SPACE_THRESHOLD_DEF; herr_t ret_value = SUCCEED; /* Return value */ FUNC_ENTER_NOAPI_NOINIT(H5P_fcrt_reg_prop) @@ -192,65 +199,19 @@ H5P_fcrt_reg_prop(H5P_genclass_t *pclass) if(H5P_register(pclass,H5F_CRT_SHMSG_BTREE_MIN_NAME, H5F_CRT_SHMSG_BTREE_MIN_SIZE, &sohm_btree_min,NULL,NULL,NULL,NULL,NULL,NULL,NULL)<0) HGOTO_ERROR(H5E_PLIST, H5E_CANTINSERT, FAIL, "can't insert property into class") + /* Register the file space handling strategy */ + if(H5P_register(pclass, H5F_CRT_FILE_SPACE_STRATEGY_NAME, H5F_CRT_FILE_SPACE_STRATEGY_SIZE, &file_space_strategy, NULL, NULL, NULL, NULL, NULL, NULL, NULL) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTINSERT, FAIL, "can't insert property into class") + + /* Register the free space section threshold */ + if(H5P_register(pclass, H5F_CRT_FREE_SPACE_THRESHOLD_NAME, H5F_CRT_FREE_SPACE_THRESHOLD_SIZE, &free_space_threshold, NULL, NULL, NULL, NULL, NULL, NULL, NULL) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTINSERT, FAIL, "can't insert property into class") done: FUNC_LEAVE_NOAPI(ret_value) } /* end H5P_fcrt_reg_prop() */ /*------------------------------------------------------------------------- - * Function: H5Pget_version - * - * Purpose: Retrieves version information for various parts of a file. - * - * SUPER: The file super block. - * FREELIST: The global free list. - * STAB: The root symbol table entry. - * SHHDR: Shared object headers. - * - * Any (or even all) of the output arguments can be null - * pointers. - * - * Return: Success: Non-negative, version information is returned - * through the arguments. - * - * Failure: Negative - * - * Programmer: Robb Matzke - * Wednesday, January 7, 1998 - * - *------------------------------------------------------------------------- - */ -herr_t -H5Pget_version(hid_t plist_id, unsigned *super/*out*/, unsigned *freelist/*out*/, - unsigned *stab/*out*/, unsigned *shhdr/*out*/) -{ - H5P_genplist_t *plist; /* Property list pointer */ - herr_t ret_value = SUCCEED; /* Return value */ - - FUNC_ENTER_API(H5Pget_version, FAIL) - H5TRACE5("e", "ixxxx", plist_id, super, freelist, stab, shhdr); - - /* Get the plist structure */ - if(NULL == (plist = H5P_object_verify(plist_id,H5P_FILE_CREATE))) - HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") - - /* Get values */ - if(super) - if(H5P_get(plist, H5F_CRT_SUPER_VERS_NAME, super) < 0) - HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get superblock version") - if(freelist) - *freelist = HDF5_FREESPACE_VERSION; /* (hard-wired) */ - if(stab) - *stab = HDF5_OBJECTDIR_VERSION; /* (hard-wired) */ - if(shhdr) - *shhdr = HDF5_SHAREDHEADER_VERSION; /* (hard-wired) */ - -done: - FUNC_LEAVE_API(ret_value) -} /* end H5Pget_version() */ - - -/*------------------------------------------------------------------------- * Function: H5Pset_userblock * * Purpose: Sets the userblock size field of a file creation property @@ -943,3 +904,88 @@ done: FUNC_LEAVE_API(ret_value); } /* end H5Pget_shared_mesg_phase_change() */ + +/*------------------------------------------------------------------------- + * Function: H5Pset_file_space + * + * Purpose: Sets the strategy that the library employs in managing file space. + * If strategy is zero, the property is not changed; the existing + * strategy is retained. + * Sets the threshold value that the file's free space + * manager(s) will use to track free space sections. + * If threshold is zero, the property is not changed; the existing + * threshold is retained. + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; June 10, 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5Pset_file_space(hid_t plist_id, H5F_file_space_type_t strategy, hsize_t threshold) +{ + H5P_genplist_t *plist; /* Property list pointer */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_API(H5Pset_file_space, FAIL) + H5TRACE3("e", "iFfh", plist_id, strategy, threshold); + + if((unsigned)strategy >= H5F_FILE_SPACE_NTYPES) + HGOTO_ERROR(H5E_ARGS, H5E_BADVALUE, FAIL, "invalid strategy") + + /* Get the plist structure */ + if(NULL == (plist = H5P_object_verify(plist_id,H5P_FILE_CREATE))) + HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") + + /* Set value(s), if non-zero */ + if(strategy) + if(H5P_set(plist, H5F_CRT_FILE_SPACE_STRATEGY_NAME, &strategy) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't set file space strategy") + if(threshold) + if(H5P_set(plist, H5F_CRT_FREE_SPACE_THRESHOLD_NAME, &threshold) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't set free-space threshold") + +done: + FUNC_LEAVE_API(ret_value) +} /* H5Pset_file_space() */ + + +/*------------------------------------------------------------------------- + * Function: H5Pget_file_space + * + * Purpose: Retrieves the strategy that the library uses in managing file space. + * Retrieves the threshold value that the file's free space + * managers use to track free space sections. + * + * Return: Non-negative on success/Negative on failure + * + * Programmer: Vailin Choi; June 10, 2009 + * + *------------------------------------------------------------------------- + */ +herr_t +H5Pget_file_space(hid_t plist_id, H5F_file_space_type_t *strategy, hsize_t *threshold) +{ + H5P_genplist_t *plist; /* Property list pointer */ + herr_t ret_value = SUCCEED; /* Return value */ + + FUNC_ENTER_API(H5Pget_file_space, FAIL) + H5TRACE3("e", "i*Ff*h", plist_id, strategy, threshold); + + /* Get the plist structure */ + if(NULL == (plist = H5P_object_verify(plist_id,H5P_FILE_CREATE))) + HGOTO_ERROR(H5E_ATOM, H5E_BADATOM, FAIL, "can't find object for ID") + + /* Get value(s) */ + if(strategy) + if(H5P_get(plist, H5F_CRT_FILE_SPACE_STRATEGY_NAME, strategy) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get file space strategy") + if(threshold) + if(H5P_get(plist, H5F_CRT_FREE_SPACE_THRESHOLD_NAME, threshold) < 0) + HGOTO_ERROR(H5E_PLIST, H5E_CANTGET, FAIL, "can't get free-space threshold") + +done: + FUNC_LEAVE_API(ret_value) +} /* H5Pget_file_space() */ + diff --git a/src/H5Ppublic.h b/src/H5Ppublic.h index 495ba42..1e4cf2f 100644 --- a/src/H5Ppublic.h +++ b/src/H5Ppublic.h @@ -208,9 +208,6 @@ H5_DLL herr_t H5Pset_obj_track_times(hid_t plist_id, hbool_t track_times); H5_DLL herr_t H5Pget_obj_track_times(hid_t plist_id, hbool_t *track_times); /* File creation property list (FCPL) routines */ -H5_DLL herr_t H5Pget_version(hid_t plist_id, unsigned *boot/*out*/, - unsigned *freelist/*out*/, unsigned *stab/*out*/, - unsigned *shhdr/*out*/); H5_DLL herr_t H5Pset_userblock(hid_t plist_id, hsize_t size); H5_DLL herr_t H5Pget_userblock(hid_t plist_id, hsize_t *size); H5_DLL herr_t H5Pset_sizes(hid_t plist_id, size_t sizeof_addr, @@ -227,6 +224,8 @@ H5_DLL herr_t H5Pset_shared_mesg_index(hid_t plist_id, unsigned index_num, unsig H5_DLL herr_t H5Pget_shared_mesg_index(hid_t plist_id, unsigned index_num, unsigned *mesg_type_flags, unsigned *min_mesg_size); H5_DLL herr_t H5Pset_shared_mesg_phase_change(hid_t plist_id, unsigned max_list, unsigned min_btree); H5_DLL herr_t H5Pget_shared_mesg_phase_change(hid_t plist_id, unsigned *max_list, unsigned *min_btree); +H5_DLL herr_t H5Pset_file_space(hid_t plist_id, H5F_file_space_type_t strategy, hsize_t threshold); +H5_DLL herr_t H5Pget_file_space(hid_t plist_id, H5F_file_space_type_t *strategy, hsize_t *threshold); /* File access property list (FAPL) routines */ @@ -422,7 +421,9 @@ H5_DLL H5Z_filter_t H5Pget_filter1(hid_t plist_id, unsigned filter, H5_DLL herr_t H5Pget_filter_by_id1(hid_t plist_id, H5Z_filter_t id, unsigned int *flags/*out*/, size_t *cd_nelmts/*out*/, unsigned cd_values[]/*out*/, size_t namelen, char name[]/*out*/); - +H5_DLL herr_t H5Pget_version(hid_t plist_id, unsigned *boot/*out*/, + unsigned *freelist/*out*/, unsigned *stab/*out*/, + unsigned *shhdr/*out*/); #endif /* H5_NO_DEPRECATED_SYMBOLS */ #ifdef __cplusplus @@ -2494,7 +2494,7 @@ done: *------------------------------------------------------------------------- */ herr_t -H5SM_ih_size(H5F_t *f, hid_t dxpl_id, H5F_info_t *finfo) +H5SM_ih_size(H5F_t *f, hid_t dxpl_id, hsize_t *hdr_size, H5_ih_info_t *ih_info) { H5SM_master_table_t *table = NULL; /* SOHM master table */ H5HF_t *fheap = NULL; /* Fractal heap handle */ @@ -2506,14 +2506,15 @@ H5SM_ih_size(H5F_t *f, hid_t dxpl_id, H5F_info_t *finfo) /* Sanity check */ HDassert(f); HDassert(H5F_addr_defined(f->shared->sohm_addr)); - HDassert(finfo); + HDassert(hdr_size); + HDassert(ih_info); /* Look up the master SOHM table */ if(NULL == (table = (H5SM_master_table_t *)H5AC_protect(f, dxpl_id, H5AC_SOHM_TABLE, f->shared->sohm_addr, NULL, NULL, H5AC_READ))) HGOTO_ERROR(H5E_CACHE, H5E_CANTPROTECT, FAIL, "unable to load SOHM master table") /* Get SOHM header size */ - finfo->sohm.hdr_size = (hsize_t) H5SM_TABLE_SIZE(f) + + *hdr_size = (hsize_t) H5SM_TABLE_SIZE(f) + (hsize_t)(table->num_indexes * H5SM_INDEX_HEADER_SIZE(f)); /* Loop over all the indices for shared messages */ @@ -2521,11 +2522,11 @@ H5SM_ih_size(H5F_t *f, hid_t dxpl_id, H5F_info_t *finfo) /* Get index storage size (for either B-tree or list) */ if(table->indexes[u].index_type == H5SM_BTREE) { if(H5F_addr_defined(table->indexes[u].index_addr)) - if(H5B2_iterate_size(f, dxpl_id, H5SM_INDEX, table->indexes[u].index_addr, &(finfo->sohm.msgs_info.index_size)) < 0) + if(H5B2_iterate_size(f, dxpl_id, H5SM_INDEX, table->indexes[u].index_addr, &(ih_info->index_size)) < 0) HGOTO_ERROR(H5E_BTREE, H5E_CANTGET, FAIL, "can't retrieve B-tree storage info") } /* end if */ else if(table->indexes[u].index_type == H5SM_LIST) - finfo->sohm.msgs_info.index_size += H5SM_LIST_SIZE(f, table->indexes[u].list_max); + ih_info->index_size += H5SM_LIST_SIZE(f, table->indexes[u].list_max); /* Check for heap for this index */ if(H5F_addr_defined(table->indexes[u].heap_addr)) { @@ -2534,7 +2535,7 @@ H5SM_ih_size(H5F_t *f, hid_t dxpl_id, H5F_info_t *finfo) HGOTO_ERROR(H5E_HEAP, H5E_CANTOPENOBJ, FAIL, "unable to open fractal heap") /* Get heap storage size */ - if(H5HF_size(fheap, dxpl_id, &(finfo->sohm.msgs_info.heap_size)) < 0) + if(H5HF_size(fheap, dxpl_id, &(ih_info->heap_size)) < 0) HGOTO_ERROR(H5E_HEAP, H5E_CANTGET, FAIL, "can't retrieve fractal heap storage info") /* Release the fractal heap */ diff --git a/src/H5SMprivate.h b/src/H5SMprivate.h index 1465357..46a43ad 100755 --- a/src/H5SMprivate.h +++ b/src/H5SMprivate.h @@ -56,7 +56,7 @@ H5_DLL herr_t H5SM_reconstitute(H5O_shared_t *sh_mesg, H5F_t *f, unsigned msg_type_id, H5O_fheap_id_t heap_id); H5_DLL herr_t H5SM_get_refcount(H5F_t *f, hid_t dxpl_id, unsigned type_id, const H5O_shared_t *sh_mesg, hsize_t *ref_count); -H5_DLL herr_t H5SM_ih_size(H5F_t *f, hid_t dxpl_id, H5F_info_t *bh_info); +H5_DLL herr_t H5SM_ih_size(H5F_t *f, hid_t dxpl_id, hsize_t *hdr_size, H5_ih_info_t *ih_info); /* Debugging routines */ diff --git a/src/H5trace.c b/src/H5trace.c index 5f1e128..87696d3 100644 --- a/src/H5trace.c +++ b/src/H5trace.c @@ -658,6 +658,81 @@ H5_trace (const double *returning, const char *func, const char *type, ...) } break; + case 'f': + if(ptr) { + if(vp) + fprintf(out, "0x%lx", (unsigned long)vp); + else + fprintf(out, "NULL"); + } /* end if */ + else { + H5F_file_space_type_t fs_type = va_arg(ap, H5F_file_space_type_t); /*lint !e64 Type mismatch not really occuring */ + + switch(fs_type) { + case H5F_FILE_SPACE_ALL_DEFAULT: + fprintf(out, "H5F_FILE_SPACE_ALL_DEFAULT"); + break; + case H5F_FILE_SPACE_ALL_PERSIST: + fprintf(out, "H5F_FILE_SPACE_ALL_PERSIST"); + break; + case H5F_FILE_SPACE_ALL: + fprintf(out, "H5F_FILE_SPACE_ALL"); + break; + case H5F_FILE_SPACE_AGGR_VFD: + fprintf(out, "H5F_FILE_SPACE_AGGR_VFD"); + break; + case H5F_FILE_SPACE_VFD: + fprintf(out, "H5F_FILE_SPACE_VFD"); + break; + default: + fprintf(out, "%ld", (long)fs_type); + break; + } /* end switch */ + } /* end else */ + break; + + case 'm': + if(ptr) { + if(vp) + fprintf(out, "0x%lx", (unsigned long)vp); + else + fprintf(out, "NULL"); + } /* end if */ + else { + H5F_mem_t mem_type = va_arg(ap, H5F_mem_t); /*lint !e64 Type mismatch not really occuring */ + + switch(mem_type) { + case H5FD_MEM_NOLIST: + fprintf(out, "H5FD_MEM_NOLIST"); + break; + case H5FD_MEM_DEFAULT: + fprintf(out, "H5FD_MEM_DEFAULT"); + break; + case H5FD_MEM_SUPER: + fprintf(out, "H5FD_MEM_SUPER"); + break; + case H5FD_MEM_BTREE: + fprintf(out, "H5FD_MEM_BTREE"); + break; + case H5FD_MEM_DRAW: + fprintf(out, "H5FD_MEM_DRAW"); + break; + case H5FD_MEM_GHEAP: + fprintf(out, "H5FD_MEM_GHEAP"); + break; + case H5FD_MEM_LHEAP: + fprintf(out, "H5FD_MEM_LHEAP"); + break; + case H5FD_MEM_OHDR: + fprintf(out, "H5FD_MEM_OHDR"); + break; + default: + fprintf(out, "%ld", (long)mem_type); + break; + } /* end switch */ + } /* end else */ + break; + case 's': if(ptr) { if(vp) diff --git a/src/H5vers.txt b/src/H5vers.txt index 18a88d9..89f7bc6 100644 --- a/src/H5vers.txt +++ b/src/H5vers.txt @@ -55,6 +55,7 @@ FUNCTION: H5Eprint; ; v10, v18 FUNCTION: H5Epush; ; v14, v18 FUNCTION: H5Eset_auto; ; v10, v18 FUNCTION: H5Ewalk; H5E_walk, H5E_error; v10, v18 +FUNCTION: H5Fget_info; H5F_info; v18, v110 FUNCTION: H5Gcreate; ; v10, v18 FUNCTION: H5Gopen; ; v10, v18 FUNCTION: H5Pget_filter; ; v10, v18 diff --git a/src/H5version.h b/src/H5version.h index 58de2ab..296768e 100644 --- a/src/H5version.h +++ b/src/H5version.h @@ -21,9 +21,9 @@ #define _H5version_H /* Issue error if contradicting macros have been defined. */ -#if defined(H5_USE_16_API) && defined(H5_NO_DEPRECATED_SYMBOLS) +#if (defined(H5_USE_16_API) || defined(H5_USE_18_API)) && defined(H5_NO_DEPRECATED_SYMBOLS) #error "Can't choose old API versions when deprecated APIs are disabled" -#endif /* defined(H5_USE_16_API) && defined(H5_NO_DEPRECATED_SYMBOLS) */ +#endif /* (defined(H5_USE_16_API) || defined(H5_USE_18_API)) && defined(H5_NO_DEPRECATED_SYMBOLS) */ /* If a particular "global" version of the library's interfaces is chosen, @@ -36,6 +36,11 @@ #define H5_USE_16_API 1 #endif /* H5_USE_16_API_DEFAULT && !H5_USE_16_API */ +#if defined(H5_USE_18_API_DEFAULT) && !defined(H5_USE_18_API) +#define H5_USE_18_API 1 +#endif /* H5_USE_18_API_DEFAULT && !H5_USE_18_API */ + + #ifdef H5_USE_16_API /*************/ @@ -140,6 +145,114 @@ #endif /* H5_USE_16_API */ +#ifdef H5_USE_18_API + +/*************/ +/* Functions */ +/*************/ + +#if !defined(H5Acreate_vers) +#define H5Acreate_vers 2 +#endif /* !defined(H5Acreate_vers) */ + +#if !defined(H5Aiterate_vers) +#define H5Aiterate_vers 2 +#endif /* !defined(H5Aiterate_vers) */ + +#if !defined(H5Dcreate_vers) +#define H5Dcreate_vers 2 +#endif /* !defined(H5Dcreate_vers) */ + +#if !defined(H5Dopen_vers) +#define H5Dopen_vers 2 +#endif /* !defined(H5Dopen_vers) */ + +#if !defined(H5Eclear_vers) +#define H5Eclear_vers 2 +#endif /* !defined(H5Eclear_vers) */ + +#if !defined(H5Eget_auto_vers) +#define H5Eget_auto_vers 2 +#endif /* !defined(H5Eget_auto_vers) */ + +#if !defined(H5Eprint_vers) +#define H5Eprint_vers 2 +#endif /* !defined(H5Eprint_vers) */ + +#if !defined(H5Epush_vers) +#define H5Epush_vers 2 +#endif /* !defined(H5Epush_vers) */ + +#if !defined(H5Eset_auto_vers) +#define H5Eset_auto_vers 2 +#endif /* !defined(H5Eset_auto_vers) */ + +#if !defined(H5Ewalk_vers) +#define H5Ewalk_vers 2 +#endif /* !defined(H5Ewalk_vers) */ + +#if !defined(H5Fget_info_vers) +#define H5Fget_info_vers 1 +#endif /* !defined(H5Fget_info_vers) */ + +#if !defined(H5Gcreate_vers) +#define H5Gcreate_vers 2 +#endif /* !defined(H5Gcreate_vers) */ + +#if !defined(H5Gopen_vers) +#define H5Gopen_vers 2 +#endif /* !defined(H5Gopen_vers) */ + +#if !defined(H5Pget_filter_vers) +#define H5Pget_filter_vers 2 +#endif /* !defined(H5Pget_filter_vers) */ + +#if !defined(H5Pget_filter_by_id_vers) +#define H5Pget_filter_by_id_vers 2 +#endif /* !defined(H5Pget_filter_by_id_vers) */ + +#if !defined(H5Pinsert_vers) +#define H5Pinsert_vers 2 +#endif /* !defined(H5Pinsert_vers) */ + +#if !defined(H5Pregister_vers) +#define H5Pregister_vers 2 +#endif /* !defined(H5Pregister_vers) */ + +#if !defined(H5Rget_obj_type_vers) +#define H5Rget_obj_type_vers 2 +#endif /* !defined(H5Rget_obj_type_vers) */ + +#if !defined(H5Tarray_create_vers) +#define H5Tarray_create_vers 2 +#endif /* !defined(H5Tarray_create_vers) */ + +#if !defined(H5Tcommit_vers) +#define H5Tcommit_vers 2 +#endif /* !defined(H5Tcommit_vers) */ + +#if !defined(H5Tget_array_dims_vers) +#define H5Tget_array_dims_vers 2 +#endif /* !defined(H5Tget_array_dims_vers) */ + +#if !defined(H5Topen_vers) +#define H5Topen_vers 2 +#endif /* !defined(H5Topen_vers) */ + +/************/ +/* Typedefs */ +/************/ + +#if !defined(H5E_auto_t_vers) +#define H5E_auto_t_vers 2 +#endif /* !defined(H5E_auto_t_vers) */ + +#if !defined(H5Z_class_t_vers) +#define H5Z_class_t_vers 2 +#endif /* !defined(H5Z_class_t_vers) */ + +#endif /* H5_USE_18_API */ + /* Choose the correct version of each API symbol, defaulting to the latest * version of each. The "best" name for API parameters/data structures @@ -267,6 +380,19 @@ #error "H5Ewalk_vers set to invalid value" #endif /* H5Ewalk_vers */ +#if !defined(H5Fget_info_vers) || H5Fget_info_vers == 2 +#ifndef H5Fget_info_vers +#define H5Fget_info_vers 2 +#endif /* H5Fget_info_vers */ +#define H5Fget_info H5Fget_info2 +#define H5F_info_t H5F_info2_t +#elif H5Fget_info_vers == 1 +#define H5Fget_info H5Fget_info1 +#define H5F_info_t H5F_info1_t +#else /* H5Fget_info_vers */ +#error "H5Fget_info_vers set to invalid value" +#endif /* H5Fget_info_vers */ + #if !defined(H5Gcreate_vers) || H5Gcreate_vers == 2 #ifndef H5Gcreate_vers #define H5Gcreate_vers 2 diff --git a/src/Makefile.am b/src/Makefile.am index eb31afb..a9f82d7 100755 --- a/src/Makefile.am +++ b/src/Makefile.am @@ -53,7 +53,8 @@ libhdf5_la_SOURCES= H5.c H5checksum.c H5dbg.c H5system.c H5timer.c H5trace.c \ H5E.c H5Edeprec.c H5Eint.c \ H5EA.c H5EAcache.c H5EAdbg.c H5EAdblkpage.c H5EAdblock.c H5EAhdr.c \ H5EAiblock.c H5EAint.c H5EAsblock.c H5EAstat.c H5EAtest.c \ - H5F.c H5Faccum.c H5Fdbg.c H5Ffake.c H5Fio.c H5Fmount.c H5Fmpi.c H5Fquery.c \ + H5F.c H5Faccum.c H5Fdbg.c H5Fdeprec.c H5Ffake.c H5Fio.c H5Fmount.c \ + H5Fmpi.c H5Fquery.c \ H5Fsfile.c H5Fsuper.c H5Fsuper_cache.c H5Ftest.c \ H5FA.c H5FAcache.c H5FAdbg.c H5FAdblock.c H5FAdblkpage.c H5FAhdr.c \ H5FAstat.c H5FAtest.c \ @@ -77,7 +78,7 @@ libhdf5_la_SOURCES= H5.c H5checksum.c H5dbg.c H5system.c H5timer.c H5trace.c \ H5O.c H5Oainfo.c H5Oalloc.c H5Oattr.c \ H5Oattribute.c H5Obogus.c H5Obtreek.c H5Ocache.c \ H5Ocont.c H5Ocopy.c H5Odbg.c H5Odrvinfo.c H5Odtype.c H5Oefl.c \ - H5Ofill.c H5Oginfo.c \ + H5Ofill.c H5Ofsinfo.c H5Oginfo.c \ H5Olayout.c \ H5Olinfo.c H5Olink.c H5Omessage.c H5Omtime.c \ H5Oname.c H5Onull.c H5Opline.c H5Orefcount.c \ diff --git a/src/Makefile.in b/src/Makefile.in index ef006a7..d9d05d5 100644 --- a/src/Makefile.in +++ b/src/Makefile.in @@ -106,8 +106,8 @@ am_libhdf5_la_OBJECTS = H5.lo H5checksum.lo H5dbg.lo H5system.lo \ H5E.lo H5Edeprec.lo H5Eint.lo H5EA.lo H5EAcache.lo H5EAdbg.lo \ H5EAdblkpage.lo H5EAdblock.lo H5EAhdr.lo H5EAiblock.lo \ H5EAint.lo H5EAsblock.lo H5EAstat.lo H5EAtest.lo H5F.lo \ - H5Faccum.lo H5Fdbg.lo H5Ffake.lo H5Fio.lo H5Fmount.lo \ - H5Fmpi.lo H5Fquery.lo H5Fsfile.lo H5Fsuper.lo \ + H5Faccum.lo H5Fdbg.lo H5Fdeprec.lo H5Ffake.lo H5Fio.lo \ + H5Fmount.lo H5Fmpi.lo H5Fquery.lo H5Fsfile.lo H5Fsuper.lo \ H5Fsuper_cache.lo H5Ftest.lo H5FA.lo H5FAcache.lo H5FAdbg.lo \ H5FAdblock.lo H5FAdblkpage.lo H5FAhdr.lo H5FAstat.lo \ H5FAtest.lo H5FD.lo H5FDcore.lo H5FDdirect.lo H5FDfamily.lo \ @@ -127,15 +127,15 @@ am_libhdf5_la_OBJECTS = H5.lo H5checksum.lo H5dbg.lo H5system.lo \ H5MPtest.lo H5O.lo H5Oainfo.lo H5Oalloc.lo H5Oattr.lo \ H5Oattribute.lo H5Obogus.lo H5Obtreek.lo H5Ocache.lo \ H5Ocont.lo H5Ocopy.lo H5Odbg.lo H5Odrvinfo.lo H5Odtype.lo \ - H5Oefl.lo H5Ofill.lo H5Oginfo.lo H5Olayout.lo H5Olinfo.lo \ - H5Olink.lo H5Omessage.lo H5Omtime.lo H5Oname.lo H5Onull.lo \ - H5Opline.lo H5Orefcount.lo H5Osdspace.lo H5Oshared.lo \ - H5Ostab.lo H5Oshmesg.lo H5Otest.lo H5Ounknown.lo H5P.lo \ - H5Pacpl.lo H5Pdapl.lo H5Pdcpl.lo H5Pdeprec.lo H5Pdxpl.lo \ - H5Pfapl.lo H5Pfcpl.lo H5Pfmpl.lo H5Pgcpl.lo H5Pint.lo \ - H5Plapl.lo H5Plcpl.lo H5Pocpl.lo H5Pocpypl.lo H5Pstrcpl.lo \ - H5Ptest.lo H5R.lo H5Rdeprec.lo H5RC.lo H5RS.lo H5S.lo \ - H5Sall.lo H5Sdbg.lo H5Shyper.lo H5Smpio.lo H5Snone.lo \ + H5Oefl.lo H5Ofill.lo H5Ofsinfo.lo H5Oginfo.lo H5Olayout.lo \ + H5Olinfo.lo H5Olink.lo H5Omessage.lo H5Omtime.lo H5Oname.lo \ + H5Onull.lo H5Opline.lo H5Orefcount.lo H5Osdspace.lo \ + H5Oshared.lo H5Ostab.lo H5Oshmesg.lo H5Otest.lo H5Ounknown.lo \ + H5P.lo H5Pacpl.lo H5Pdapl.lo H5Pdcpl.lo H5Pdeprec.lo \ + H5Pdxpl.lo H5Pfapl.lo H5Pfcpl.lo H5Pfmpl.lo H5Pgcpl.lo \ + H5Pint.lo H5Plapl.lo H5Plcpl.lo H5Pocpl.lo H5Pocpypl.lo \ + H5Pstrcpl.lo H5Ptest.lo H5R.lo H5Rdeprec.lo H5RC.lo H5RS.lo \ + H5S.lo H5Sall.lo H5Sdbg.lo H5Shyper.lo H5Smpio.lo H5Snone.lo \ H5Spoint.lo H5Sselect.lo H5Stest.lo H5SL.lo H5SM.lo \ H5SMbtree2.lo H5SMcache.lo H5SMtest.lo H5ST.lo H5T.lo \ H5Tarray.lo H5Tbit.lo H5Tcommit.lo H5Tcompound.lo H5Tconv.lo \ @@ -460,7 +460,8 @@ libhdf5_la_SOURCES = H5.c H5checksum.c H5dbg.c H5system.c H5timer.c H5trace.c \ H5E.c H5Edeprec.c H5Eint.c \ H5EA.c H5EAcache.c H5EAdbg.c H5EAdblkpage.c H5EAdblock.c H5EAhdr.c \ H5EAiblock.c H5EAint.c H5EAsblock.c H5EAstat.c H5EAtest.c \ - H5F.c H5Faccum.c H5Fdbg.c H5Ffake.c H5Fio.c H5Fmount.c H5Fmpi.c H5Fquery.c \ + H5F.c H5Faccum.c H5Fdbg.c H5Fdeprec.c H5Ffake.c H5Fio.c H5Fmount.c \ + H5Fmpi.c H5Fquery.c \ H5Fsfile.c H5Fsuper.c H5Fsuper_cache.c H5Ftest.c \ H5FA.c H5FAcache.c H5FAdbg.c H5FAdblock.c H5FAdblkpage.c H5FAhdr.c \ H5FAstat.c H5FAtest.c \ @@ -484,7 +485,7 @@ libhdf5_la_SOURCES = H5.c H5checksum.c H5dbg.c H5system.c H5timer.c H5trace.c \ H5O.c H5Oainfo.c H5Oalloc.c H5Oattr.c \ H5Oattribute.c H5Obogus.c H5Obtreek.c H5Ocache.c \ H5Ocont.c H5Ocopy.c H5Odbg.c H5Odrvinfo.c H5Odtype.c H5Oefl.c \ - H5Ofill.c H5Oginfo.c \ + H5Ofill.c H5Ofsinfo.c H5Oginfo.c \ H5Olayout.c \ H5Olinfo.c H5Olink.c H5Omessage.c H5Omtime.c \ H5Oname.c H5Onull.c H5Opline.c H5Orefcount.c \ @@ -730,6 +731,7 @@ distclean-compile: @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5FStest.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Faccum.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Fdbg.Plo@am__quote@ +@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Fdeprec.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Ffake.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Fio.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Fmount.Plo@am__quote@ @@ -805,6 +807,7 @@ distclean-compile: @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Odtype.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Oefl.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Ofill.Plo@am__quote@ +@AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Ofsinfo.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Oginfo.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Olayout.Plo@am__quote@ @AMDEP_TRUE@@am__include@ @am__quote@./$(DEPDIR)/H5Olinfo.Plo@am__quote@ |