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Diffstat (limited to 'test/chunk_info.c')
| -rw-r--r-- | test/chunk_info.c | 1964 |
1 files changed, 1964 insertions, 0 deletions
diff --git a/test/chunk_info.c b/test/chunk_info.c new file mode 100644 index 0000000..a28ca84 --- /dev/null +++ b/test/chunk_info.c @@ -0,0 +1,1964 @@ +/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * + * Copyright by The HDF Group. * + * Copyright by the Board of Trustees of the University of Illinois. * + * All rights reserved. * + * * + * This file is part of HDF5. The full HDF5 copyright notice, including * + * terms governing use, modification, and redistribution, is contained in * + * the COPYING file, which can be found at the root of the source code * + * distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. * + * If you do not have access to either file, you may request a copy from * + * help@hdfgroup.org. * + * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ +/* + * + * Purpose: Tests chunk query API functions + * + * Modification: + * Many tests were added for HDFFV-10677. -BMR, August 2019 + * + * Test structure: + * main() + * test_basic_query() + * test_get_chunk_info_highest_v18() + * test_get_chunk_info_v110() + * test_chunk_info_single_chunk() + * test_chunk_info_implicit() + * test_chunk_info_fixed_array() + * test_chunk_info_extensible_array() + * test_chunk_info_version2_btrees() + * test_failed_attempts() + * test_flt_msk_with_skip_compress() + * + * Helper functions: + * read_each_chunk() + * verify_and_write() + * verify_get_chunk_info() + * verify_get_chunk_info_by_coord() + * verify_empty_chunk_info() + * index_type_str() + * + */ +#define H5D_FRIEND +#define H5D_TESTING /* to use H5D__ functions */ +#include "H5Dpkg.h" + +#include "testhdf5.h" +#include "zlib.h" + +/* Test file names, using H5F_libver_t as indices */ +const char *FILENAME[] = { + "tchunk_info_earliest", + "tchunk_info_v18", + "tchunk_info_v110", + "tchunk_info_v112", + NULL +}; + +/* File to be used in test_failed_attempts */ +#define FILTERMASK_FILE "tflt_msk" +#define BASIC_FILE "basic_query" + +/* Parameters for testing chunk querying */ +#define SIMPLE_CHUNKED_DSET_NAME "Chunked Dataset" +#define CONTIGUOUS_DSET_NAME "Contiguous Dataset" +#define EMPTY_DSET_NAME "Empty Dataset" +#define EMPTY_EARLY_ALLOC_DSET_NAME "Empty Dataset with ALLOC_TIME_EARLY" +#define SINGLE_CHUNK_DSET_NAME "Single Chunk Index Dataset" +#define IMPLICIT_INDEX_DSET_NAME "Implicit Index Dataset" +#define FIXED_ARR_INDEX_DSET_NAME "Fixed Array Index Dataset" +#define EXT_ARR_INDEX_DSET_NAME "Extensible Array Index Dataset" +#define V2_BTREE_INDEX_DSET_NAME "Version 2 B-Tree Index Dataset" +#define SKIP_FILTER_DSET_NAME "Dataset with Skipping One Filter" +#define FILENAME_BUF_SIZE 256 /* Size for file names */ +#define RANK 2 /* Rank for datasets */ + +/* Dimension of the dataset */ +#define NX 24 +#define NY 16 + +/* Dimension of the chunk */ +#define CHUNK_NX 6 +#define CHUNK_NY 4 + +/* X/Y coords of first chunk written */ +#define START_CHK_X 0 +#define START_CHK_Y 2 + +/* X/Y coord of last chunk written */ +#define END_CHK_X 2 +#define END_CHK_Y 4 + +/* X and Y coords of an empty chunk */ +#define EMPTY_CHK_X 0 +#define EMPTY_CHK_Y 0 + +/* Size of a chunk when the entire dataset is a one single chunk */ +#define SINGLE_CHK_SIZE (NX*NY*sizeof(int)) + +/* Size of a chunk */ +#define CHK_SIZE (CHUNK_NX*CHUNK_NY*sizeof(int)) + +/* Size of an empty chunk */ +#define EMPTY_CHK_SIZE 0 + +/* Number of maximum chunks without extending */ +#define NUM_CHUNKS ((NX/CHUNK_NX)*(NY/CHUNK_NY)) + +/* Number of chunks that have been written */ +#define NUM_CHUNKS_WRITTEN 4 +#define ONE_CHUNK_WRITTEN 1 +#define TWO_CHUNKS_WRITTEN 2 +#define NO_CHUNK_WRITTEN 0 + +/* For testing invalid arguments */ +#define NONEXIST_CHK_INDEX 3 +#define OUTOFRANGE_CHK_INDEX 5 +#define INVALID_CHK_INDEX 5 + +/* For compressed data */ +#define DEFLATE_SIZE_ADJUST(s) (ceil(((double)(s))*1.001)+12) + +/* For use in error reporting */ +#define MSG_CHK_ADDR "Chunk address should not be HADDR_UNDEF because of H5D_ALLOC_TIME_EARLY." +#define MSG_CHK_SIZE "Chunk size should not be 0 because of H5D_ALLOC_TIME_EARLY." + +/* Utility function to initialize arguments */ +void reinit_vars(unsigned *read_flt_msk, haddr_t *addr, hsize_t *size); + +/* Helper function containing common code that verifies indexing type + and number of chunks */ +static int verify_and_write(hid_t chunkfile, const char* dset_name, hid_t dspace, H5D_chunk_index_t exp_idx_type, hsize_t exp_num_chunks, unsigned flt_msk); +static int verify_get_chunk_info(hid_t dset, hid_t dspace, hsize_t chk_index, hsize_t exp_chk_size, hsize_t *exp_offset, unsigned exp_flt_msk); +static int verify_get_chunk_info_by_coord(hid_t dset, hsize_t *offset, hsize_t exp_chk_size, unsigned exp_flt_msk); +static int verify_empty_chunk_info(hid_t dset, hsize_t *offset); +static const char* index_type_str(H5D_chunk_index_t idx_type); + +/*------------------------------------------------------------------------- + * Function: read_each_chunk (helper function) + * + * Purpose: Reads the chunk specified by its offset and verifies that + * it contains the same data as what was written. This function + * is used in various test_get_chunk_info... functions. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: September 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t read_each_chunk(hid_t dset_id, hsize_t *offset, void *direct_buf) +{ + int read_buf[CHUNK_NX][CHUNK_NY]; + unsigned read_flt_msk = 0; + + HDmemset(&read_buf, 0, sizeof(read_buf)); + + /* Read the chunk specified by its offset */ + if(H5Dread_chunk(dset_id, H5P_DEFAULT, offset, &read_flt_msk, read_buf) < 0) + return FAIL; + + /* Verify that read chunk is the same as the corresponding written one */ + if(HDmemcmp(direct_buf, read_buf, CHUNK_NX*CHUNK_NY) != 0) + { + HDfprintf(stderr, "Read chunk differs from written chunk at offset (%d,%d)\n", offset[0], offset[1]); + return FAIL; + } + + return SUCCEED; +} + +/*------------------------------------------------------------------------- + * Function: reinit_vars (helper function) + * + * Purpose: Wipes out variables for the next use, used in various tests. + * + * Return: Won't fail + * + * Date: September 2018 + * + *------------------------------------------------------------------------- + */ +void reinit_vars(unsigned *read_flt_msk, haddr_t *addr, hsize_t *size) +{ + if(read_flt_msk) + *read_flt_msk = 0; + if(addr) + *addr = 0; + if(size) + *size = 0; +} + +/*------------------------------------------------------------------------- + * Function: verify_get_chunk_info (helper function) + * + * Purpose: Verifies that H5Dget_chunk_info returns correct + * values for a chunk. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static int +verify_get_chunk_info(hid_t dset, hid_t dspace, hsize_t chk_index, hsize_t exp_chk_size, hsize_t *exp_offset, unsigned exp_flt_msk) +{ + unsigned read_flt_msk = 0; /* Read filter mask */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + + if(H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size) < 0) + TEST_ERROR + CHECK(addr, HADDR_UNDEF, "H5Dget_chunk_info"); + VERIFY(size, exp_chk_size, "H5Dget_chunk_info, chunk size"); + VERIFY(read_flt_msk, exp_flt_msk, "H5Dget_chunk_info, filter mask"); + VERIFY(out_offset[0], exp_offset[0], "H5Dget_chunk_info, offset[0]"); + VERIFY(out_offset[1], exp_offset[1], "H5Dget_chunk_info, offset[1]"); + return SUCCEED; + +error: + return FAIL; +} + +/*------------------------------------------------------------------------- + * Function: verify_get_chunk_info_by_coord (helper function) + * + * Purpose: Verifies that H5Dget_chunk_info_by_coord returns correct + * values for a chunk. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static int +verify_get_chunk_info_by_coord(hid_t dset, hsize_t *offset, hsize_t exp_chk_size, unsigned exp_flt_msk) +{ + unsigned read_flt_msk = 0; /* Read filter mask */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + + /* Get info of the chunk at logical coordinates specified by offset */ + if(H5Dget_chunk_info_by_coord(dset, offset, &read_flt_msk, &addr, &size) < 0) + TEST_ERROR + CHECK(addr, HADDR_UNDEF, "H5Dget_chunk_info_by_coord"); + VERIFY(size, exp_chk_size, "H5Dget_chunk_info_by_coord, chunk size"); + VERIFY(read_flt_msk, exp_flt_msk, "H5Dget_chunk_info_by_coord, filter mask"); + return SUCCEED; + +error: + return FAIL; +} + +/*------------------------------------------------------------------------- + * Function: verify_empty_chunk_info (helper function) + * + * Purpose: Verifies that H5Dget_chunk_info_by_coord returns correct + * values for an empty chunk. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: August 2018 + * + *------------------------------------------------------------------------- + */ +static int +verify_empty_chunk_info(hid_t dset, hsize_t *offset) +{ + unsigned read_flt_msk = 0; /* Read filter mask */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + + /* Get info of the chunk at logical coordinates specified by offset */ + if(H5Dget_chunk_info_by_coord(dset, offset, &read_flt_msk, &addr, &size) < 0) + TEST_ERROR + VERIFY(addr, HADDR_UNDEF, "H5Dget_chunk_info_by_coord, chunk address"); + VERIFY(size, EMPTY_CHK_SIZE, "H5Dget_chunk_info_by_coord, chunk size"); + return SUCCEED; + +error: + return FAIL; +} + +/*------------------------------------------------------------------------- + * Function: index_type_str (helper function) + * + * Purpose: Returns the string containing the text associated with the + * given indexing scheme. For use in error messages. + * + * Return: Success: a valid indexing scheme string + * Failure: a note indicating the indexing type is invalid + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static const char* +index_type_str(H5D_chunk_index_t idx_type) +{ + switch (idx_type) { + case H5D_CHUNK_IDX_SINGLE: + return("Single Chunk index type"); + case H5D_CHUNK_IDX_NONE: + return("Implicit index type"); + case H5D_CHUNK_IDX_FARRAY: + return("Fixed Array index type"); + case H5D_CHUNK_IDX_EARRAY: + return("Extensible Array index type"); + case H5D_CHUNK_IDX_BT2: + return("Version 2 B-tree index type"); + case H5D_CHUNK_IDX_BTREE: + return("Version 1 B-tree index type (default)"); + case H5D_CHUNK_IDX_NTYPES: + default: + return("invalid index type"); + } +} /* index_type_str */ + +/*------------------------------------------------------------------------- + * Function: verify_and_write (helper function) + * + * Purpose: Verifies that chunk indexing scheme and number of chunks of + * the dataset matches the expected values, then write data to + * a subset of chunks. This function opens the dataset then + * closes it after writing. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static int +verify_and_write(hid_t chunkfile, const char* dset_name, hid_t dspace, H5D_chunk_index_t exp_idx_type, hsize_t exp_num_chunks, unsigned flt_msk) +{ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + H5D_chunk_index_t idx_type; /* Dataset chunk index type */ + hsize_t offset[2] = {0, 0}; /* Offset coordinates of a chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + hsize_t ii, jj; /* Array indices */ + int n; /* Used as chunk index, but int to avoid conversion warning */ + int direct_buf[NUM_CHUNKS][CHUNK_NX][CHUNK_NY];/* Data in chunks */ + + /* Open the dataset */ + if((dset = H5Dopen2(chunkfile, dset_name, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Get the chunk indexing type of the dataset */ + if(H5Dget_chunk_index_type(dset, &idx_type) < 0) + TEST_ERROR + + /* Ensure the correct chunk indexing scheme is used */ + if(idx_type != exp_idx_type) + { + char msg[256]; + sprintf(msg, "Should be using %s.\n", index_type_str(idx_type)); + FAIL_PUTS_ERROR(msg); + } + + /* Get and verify the number of chunks */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, exp_num_chunks, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify the number of chunks again, passing in H5S_ALL */ + if(H5Dget_num_chunks(dset, H5S_ALL, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, exp_num_chunks, "H5Dget_num_chunks, number of chunks"); + + /* Initialize the array of chunk data for all NUM_CHUNKS chunks */ + for(n = 0; n < NUM_CHUNKS; n++) + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[n][ii][jj] = n + 1; + + /* Write only NUM_CHUNKS_WRITTEN chunks at the following logical coords: + (0,2) (0,3) (1,2) (1,3) */ + n = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, n++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + if(H5Dwrite_chunk(dset, H5P_DEFAULT, flt_msk, offset, CHK_SIZE, (void*)direct_buf[n]) < 0) + TEST_ERROR + } + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + } H5E_END_TRY; + return FAIL; +} /* verify_and_write */ + +/*------------------------------------------------------------------------- + * Function: test_get_chunk_info_highest_v18 + * + * Purpose: Test getting various chunk information + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Description: + * This function tests the new API functions added for EED-343: + * H5Dget_num_chunks, H5Dget_chunk_info, and + * H5Dget_chunk_info_by_coord for high bound up to 1.8. + * + * Date: September 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_get_chunk_info_highest_v18(hid_t fapl) +{ + char filename[FILENAME_BUF_SIZE]; /* File name */ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + int direct_buf[NUM_CHUNKS][CHUNK_NX][CHUNK_NY]; /* Data in chunks */ + hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED}; /* 2 unlimited dims */ + hsize_t out_offset[2]; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t dims[2] = {NX, NY};/* Dataset dimensions */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + int fillvalue = -1; /* Fill value */ + int aggression = 9; /* Compression aggression setting */ + hsize_t offset[2] = {0, 0}; /* Offset coordinates of a chunk */ + const Bytef *z_src = (const Bytef*)(direct_buf); + Bytef *z_dst; /*destination buffer */ + uLongf z_dst_nbytes = (uLongf)DEFLATE_SIZE_ADJUST(CHK_SIZE); + uLong z_src_nbytes = (uLong)CHK_SIZE; + void *outbuf = NULL; /* Pointer to new buffer */ + hsize_t ii, jj; /* Array indices */ + int n; /* Used as chunk index, but int to avoid conversion warning */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING("getting chunk information in file with version prior to 1.10"); + + /* Create the file */ + h5_fixname(FILENAME[H5F_LIBVER_V18], fapl, filename, sizeof filename); + + /* Set version bounds for creating the file. High bound to V18 to test + chunked dataset that use B-tree v1 structures to index chunks. */ + if(H5Pset_libver_bounds(fapl, H5F_LIBVER_EARLIEST, H5F_LIBVER_V18) < 0) + TEST_ERROR + + chunkfile = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, fapl); + if(chunkfile < 0) + TEST_ERROR + + /* Create the file and memory dataspace */ + if((dspace = H5Screate_simple(RANK, dims, maxdims)) < 0) + TEST_ERROR + + /* Set dset creation properties with chunking, compression, and fillvalue */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) TEST_ERROR + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) TEST_ERROR + +#ifdef H5_HAVE_FILTER_DEFLATE + if(H5Pset_deflate(cparms, (unsigned)aggression) < 0) TEST_ERROR +#endif /* end H5_HAVE_FILTER_DEFLATE */ + + /* Set fill value */ + if(H5Pset_fill_value(cparms, H5T_NATIVE_INT, &fillvalue) < 0) TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, SIMPLE_CHUNKED_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Initialize the array of chunk data for all NUM_CHUNKS chunks */ + for(n = 0; n < NUM_CHUNKS; n++) + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[n][ii][jj] = n + 1; + + /* Allocate output (compressed) buffer */ + outbuf = malloc(z_dst_nbytes); + z_dst = (Bytef *)outbuf; + + /* Perform compression from the source to the destination buffer */ + ret = compress2(z_dst, &z_dst_nbytes, z_src, z_src_nbytes, aggression); + + /* Check for various zlib errors */ + if(Z_BUF_ERROR == ret) { + fprintf(stderr, "overflow"); + TEST_ERROR + } else if(Z_MEM_ERROR == ret) { + fprintf(stderr, "deflate memory error"); + TEST_ERROR + } else if(Z_OK != ret) { + fprintf(stderr, "other deflate error"); + TEST_ERROR + } + + /* Write only NUM_CHUNKS_WRITTEN chunks at the following logical coords: + (0,2) (0,3) (1,2) (1,3) */ + n = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, n++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + ret = H5Dwrite_chunk(dset, H5P_DEFAULT, flt_msk, offset, CHK_SIZE, (void*)direct_buf[n]); + if(ret < 0) TEST_ERROR + } + + /* Read each chunk in the subset of chunks and verify the values */ + /* if(read_each_chunk(dset, offset, (void*)direct_buf[chk_index]) < 0) + if(read_each_chunk(dset) == FAIL) + TEST_ERROR + */ + + /* Free the read buffer */ + if(outbuf) + HDfree(outbuf); + + if(H5Fflush(dset, H5F_SCOPE_LOCAL) < 0) + TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* ...open it again to test the chunk query functions */ + if((dset = H5Dopen2(chunkfile, SIMPLE_CHUNKED_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Get and verify the number of chunks written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NUM_CHUNKS_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of the last written chunk again, passing in H5S_ALL + this time */ + offset[0] = 6; + offset[1] = 12; + if(verify_get_chunk_info(dset, H5S_ALL, NUM_CHUNKS_WRITTEN-1, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + /* Attempt to get info of a non-existing chunk, should fail */ + chk_index = OUTOFRANGE_CHK_INDEX; + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, H5S_ALL, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempt to get info of a non-existing chunk."); + + /* Attempt to get info of empty chunks, verify the returned addr and size */ + offset[0] = 0; + offset[1] = 0; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + offset[0] = 3 * CHUNK_NX; + offset[1] = 3 * CHUNK_NY; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + /* Go through all written chunks, get their info and verify the values */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(verify_get_chunk_info(dset, dspace, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + /* Use the same offset to pass into the next ...by_coord function */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + } + + /* Close the first dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Create an empty dataset and close it */ + dset = H5Dcreate2(chunkfile, EMPTY_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Reopen the empty dataset to verify the chunk query functions on it */ + if((dset = H5Dopen2(chunkfile, EMPTY_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Verify that the number of chunks is 0 */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NO_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Attempt to get info of a chunk from an empty dataset, should fail */ + chk_index = OUTOFRANGE_CHK_INDEX; + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempt to get info of a non-existing chunk."); + + /* Attempt to get info of a chunk given its coords from an empty dataset, + should succeed with the returned address as HADDR_UNDEF and size as 0 */ + offset[0] = EMPTY_CHK_X; + offset[1] = EMPTY_CHK_Y; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + if(H5Dclose(dset) < 0) TEST_ERROR + + /************************************************************************ + * Test empty dataset with H5D_ALLOC_TIME_EARLY * + ************************************************************************/ + + /* Set space allocation to early so that chunk query functions will + retrieve chunk information even though the dataset is empty */ + if(H5Pset_alloc_time(cparms, H5D_ALLOC_TIME_EARLY) < 0) + TEST_ERROR + + /* Create an empty dataset and close it */ + dset = H5Dcreate2(chunkfile, EMPTY_EARLY_ALLOC_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Reopen the empty dataset to verify the chunk query functions on it */ + if((dset = H5Dopen2(chunkfile, EMPTY_EARLY_ALLOC_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Verify that the number of chunks is NUM_CHUNKS */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NUM_CHUNKS, "H5Dget_num_chunks, number of chunks"); + + /* Attempt to get info of a chunk from an empty dataset, verify the + returned address and size in the case of H5D_ALLOC_TIME_EARLY */ + chk_index = NONEXIST_CHK_INDEX; + reinit_vars(&read_flt_msk, &addr, &size); + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + if(ret < 0) TEST_ERROR + /* Because of H5D_ALLOC_TIME_EARLY, addr cannot be HADDR_UNDEF and size not 0 */ + if(addr == HADDR_UNDEF) + FAIL_PUTS_ERROR(MSG_CHK_ADDR); + if(size == EMPTY_CHK_SIZE) + FAIL_PUTS_ERROR(MSG_CHK_SIZE); + + chk_index = 10; + reinit_vars(&read_flt_msk, &addr, &size); + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + if(ret < 0) TEST_ERROR + /* Because of H5D_ALLOC_TIME_EARLY, addr cannot be HADDR_UNDEF and size not 0 */ + if(addr == HADDR_UNDEF) + FAIL_PUTS_ERROR(MSG_CHK_ADDR); + if(size == EMPTY_CHK_SIZE) + FAIL_PUTS_ERROR(MSG_CHK_SIZE); + + /* Attempt to get info of a chunk given its coords from an empty dataset, + verify the returned address and size */ + offset[0] = 0; + offset[1] = 0; + if(H5Dget_chunk_info_by_coord(dset, offset, &read_flt_msk, &addr, &size) < 0) + TEST_ERROR + /* Because of H5D_ALLOC_TIME_EARLY, addr cannot be HADDR_UNDEF and size not 0 */ + if(addr == HADDR_UNDEF) + FAIL_PUTS_ERROR(MSG_CHK_ADDR); + if(size == 0) + FAIL_PUTS_ERROR(MSG_CHK_SIZE); + + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Close/release resources. */ + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Pclose(cparms) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_get_chunk_info_highest_v18() */ + +/*------------------------------------------------------------------------- + * Function: test_chunk_info_single_chunk + * + * Purpose: Test getting various chunk information when Single Chunk + * index type is used + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: November 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_chunk_info_single_chunk(const char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t chunk_dims[2] = {NX, NY}; /* Chunk dimensions */ + int data_buf[NX][NY]; /* Input buffer */ + H5D_chunk_index_t idx_type; /* Dataset chunk index type */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING(" Single Chunk index"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, NULL)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, SINGLE_CHUNK_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* ...open it again to test the chunk query functions on a single empty + chunk */ + if((dset = H5Dopen2(chunkfile, SINGLE_CHUNK_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Ensure the correct chunk indexing scheme is used */ + if(H5Dget_chunk_index_type(dset, &idx_type) < 0) + TEST_ERROR + if(idx_type != H5D_CHUNK_IDX_SINGLE) + FAIL_PUTS_ERROR("Should be using Single Chunk index type"); + + /* Get the number of chunks and verify that no chunk has been written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NO_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Initialize the array of chunk data for the single chunk */ + for(ii = 0; ii < NX; ii++) + for(jj = 0; jj < NY; jj++) + data_buf[ii][jj] = (int)(ii*jj); + + /* Write the chunk */ + if(H5Dwrite(dset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_buf) < 0) + TEST_ERROR + + /* Get and verify that one chunk had been written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, ONE_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Offset of the only chunk */ + offset[0] = 0; + offset[1] = 0; + + /* Get and verify info of the first and only chunk */ + if(verify_get_chunk_info(dset, H5S_ALL, 0, SINGLE_CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification H5Dget_chunk_info failed\n"); + + /* Get and verify info of the chunk at logical coordinates (0,0) */ + if(verify_get_chunk_info_by_coord(dset, offset, SINGLE_CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + + /* Attempt to get chunk info given an invalid chunk index and verify + * that failure occurs */ + chk_index = INVALID_CHK_INDEX; + reinit_vars(&read_flt_msk, &addr, &size); + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + TEST_ERROR + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_chunk_info_single_chunk() */ + +/*------------------------------------------------------------------------- + * Function: test_chunk_info_implicit + * + * Purpose: Test getting various chunk information when Implicit + * index type is used + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: November 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_chunk_info_implicit(char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + unsigned flt_msk = 0; /* Filter mask */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + + TESTING(" Implicit index"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, NULL)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Set allocation time to early */ + if(H5Pset_alloc_time(cparms, H5D_ALLOC_TIME_EARLY) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, IMPLICIT_INDEX_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Verify chunk indexing scheme and number of chunks, and write data to a + subset of chunks. */ + if(verify_and_write(chunkfile, IMPLICIT_INDEX_DSET_NAME, dspace, H5D_CHUNK_IDX_NONE, NUM_CHUNKS, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification and write failed\n"); + + /* Open the dataset again to test getting chunk info */ + if((dset = H5Dopen2(chunkfile, IMPLICIT_INDEX_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Go through all chunks, and get their info and verify the values */ + chk_index = 0; + for(ii = 0; ii < NX/CHUNK_NX; ii++) + for(jj = 0; jj < NY/CHUNK_NY; jj++, chk_index++) { + hsize_t offset[2] = {ii * CHUNK_NX, jj * CHUNK_NY}; + + if(verify_get_chunk_info(dset, H5S_ALL, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + /* Get info of a chunk and verify its information. Note that + all chunks in this dataset are allocated because of the property + H5D_ALLOC_TIME_EARLY */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + } + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Pclose(cparms) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_chunk_info_implicit() */ + +/*------------------------------------------------------------------------- + * Function: test_chunk_info_fixed_array + * + * Purpose: Test getting various chunk information when Fixed Array + * index type is used + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: November 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_chunk_info_fixed_array(const char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + int direct_buf[NUM_CHUNKS][CHUNK_NX][CHUNK_NY];/* Data in chunks */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + int n; /* Used as chunk index, but int to avoid conversion warning */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING(" Fixed Array index"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, NULL)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, FIXED_ARR_INDEX_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Verify chunk indexing scheme and number of chunks, and write data + to a subset of chunks */ + if(verify_and_write(chunkfile, FIXED_ARR_INDEX_DSET_NAME, dspace, H5D_CHUNK_IDX_FARRAY, NO_CHUNK_WRITTEN, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification and write failed\n"); + + /* Open the dataset again to test getting chunk info */ + if((dset = H5Dopen2(chunkfile, FIXED_ARR_INDEX_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Get and verify the number of chunks written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NUM_CHUNKS_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of each written chunk */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + if(verify_get_chunk_info(dset, dspace, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + } + + /* Attempt to get info using an out-of-range index, chk_index is now > NUM_CHUNKS_WRITTEN. should fail */ + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempted to get info of a chunk using an out-of-range index."); + + /* Attempt to get info of empty chunks, verify the returned address and size */ + offset[0] = 0; + offset[1] = 0; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + offset[0] = 3 * CHUNK_NX; + offset[1] = 3 * CHUNK_NY; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + /* Initialize the array of chunk data for all NUM_CHUNKS chunks */ + for(n = 0; n < NUM_CHUNKS; n++) + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[n][ii][jj] = n + 1; + + /* Read each chunk and verify the values */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(read_each_chunk(dset, offset, (void*)direct_buf[chk_index]) < 0) + TEST_ERROR + } + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_chunk_info_fixed_array() */ + +/*------------------------------------------------------------------------- + * Function: test_chunk_info_extensible_array + * + * Purpose: Test getting various chunk information when Extensible Array + * index type is used + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: November 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_chunk_info_extensible_array(const char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + hsize_t maxdims[2] = {H5S_UNLIMITED, NY}; /* One unlimited dimension */ + int direct_buf[NUM_CHUNKS][CHUNK_NX][CHUNK_NY];/* Data in chunks */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + int n; /* Used as chunk index, but int to avoid conversion warning */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING(" Extensible Array index"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, maxdims)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, EXT_ARR_INDEX_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Verify chunk indexing scheme and number of chunks, and write data + to a subset of chunks */ + if(verify_and_write(chunkfile, EXT_ARR_INDEX_DSET_NAME, dspace, H5D_CHUNK_IDX_EARRAY, NO_CHUNK_WRITTEN, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification and write failed\n"); + + /* Open the dataset again to test getting chunk info */ + if((dset = H5Dopen2(chunkfile, EXT_ARR_INDEX_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Get and verify the number of chunks written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NUM_CHUNKS_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of each written chunk */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(verify_get_chunk_info(dset, dspace, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + } + + /* Attempt to get info using an out-of-range index, should fail */ + chk_index = OUTOFRANGE_CHK_INDEX; + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempted to get info of a chunk using an out-of-range index."); + + /* Attempt to get info of empty chunks, verify the returned address and size */ + offset[0] = 0; + offset[1] = 0; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + offset[0] = 3 * CHUNK_NX; + offset[1] = 3 * CHUNK_NY; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + /* Initialize the array of chunk data for all NUM_CHUNKS chunks */ + for(n = 0; n < NUM_CHUNKS; n++) + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[n][ii][jj] = n + 1; + + /* Read each chunk and verify the values */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(read_each_chunk(dset, offset, (void*)direct_buf[chk_index]) < 0) + TEST_ERROR + } + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_chunk_info_extensible_array() */ + +/*------------------------------------------------------------------------- + * Function: test_chunk_info_version2_btrees + * + * Purpose: Test getting various chunk information when Version 2 B-trees + * index type is used + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: November 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_chunk_info_version2_btrees(const char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY};/* Dataset dimensions */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED}; /* Two unlimited dims */ + int direct_buf[NUM_CHUNKS][CHUNK_NX][CHUNK_NY];/* Data in chunks */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING(" Version 2 B-trees index"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, maxdims)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(chunkfile, V2_BTREE_INDEX_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Verify chunk indexing scheme and number of chunks, and write data + to a subset of chunks */ + if(verify_and_write(chunkfile, V2_BTREE_INDEX_DSET_NAME, dspace, H5D_CHUNK_IDX_BT2, NO_CHUNK_WRITTEN, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification and write failed\n"); + + /* Open the dataset again to test getting chunk info */ + if((dset = H5Dopen2(chunkfile, V2_BTREE_INDEX_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Get and verify the number of chunks written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NUM_CHUNKS_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Go through all written chunks, get their info and verify the values */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(verify_get_chunk_info(dset, dspace, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + } + + /* Attempt to provide out-of-range offsets, should fail */ + chk_index = OUTOFRANGE_CHK_INDEX; + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempted to get info of a chunk using an out-of-range index."); + + /* Attempt to get info of empty chunks, verify the returned address and size */ + offset[0] = 0; + offset[1] = 0; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + offset[0] = 3 * CHUNK_NX; + offset[1] = 3 * CHUNK_NY; + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + /* Read each chunk and verify the values */ + chk_index = 0; + for(ii = START_CHK_X; ii < END_CHK_X; ii++) + for(jj = START_CHK_Y; jj < END_CHK_Y; jj++, chk_index++) { + offset[0] = ii * CHUNK_NX; + offset[1] = jj * CHUNK_NY; + + if(read_each_chunk(dset, offset, (void*)direct_buf[chk_index]) < 0) + TEST_ERROR + } + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_chunk_info_version2_btrees() */ + +/*------------------------------------------------------------------------- + * Function: test_basic_query + * + * Purpose: Tests basic operations to ensure the chunk query functions + * work properly. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_basic_query(hid_t fapl) +{ + char filename[FILENAME_BUF_SIZE]; /* File name */ + hid_t basicfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + int direct_buf[CHUNK_NX][CHUNK_NY];/* Data in chunks */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING("basic operations"); + + /* Create the file */ + h5_fixname(BASIC_FILE, fapl, filename, sizeof filename); + + /* Create a new file. */ + if((basicfile = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) + TEST_ERROR; + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, NULL)) < 0) + TEST_ERROR + + /* Enable chunking */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR + + if(H5Pset_chunk(cparms, RANK, chunk_dims) < 0) + TEST_ERROR + + /* Create a new dataset using cparms creation properties */ + dset = H5Dcreate2(basicfile, SIMPLE_CHUNKED_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Get the number of chunks and verify that no chunk has been written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, NO_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Initialize the array of chunk data for the single chunk */ + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[ii][jj] = (int)(ii*jj); + + /* Write the chunk of data */ + offset[0] = CHUNK_NX; + offset[1] = CHUNK_NY; + if(H5Dwrite_chunk(dset, H5P_DEFAULT, flt_msk, offset, CHK_SIZE, direct_buf) < 0) + TEST_ERROR; + + /* Get and verify that one chunk had been written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, ONE_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of the first and only chunk */ + if(verify_get_chunk_info(dset, H5S_ALL, 0, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification H5Dget_chunk_info failed\n"); + + /* Get and verify info of the chunk at the offset (CHUNK_NX,CHUNK_NY) */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + + /* Attempt to get chunk info given an invalid chunk index and verify + * that failure occurs */ + chk_index = INVALID_CHK_INDEX; + reinit_vars(&read_flt_msk, &addr, &size); + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + TEST_ERROR + + /* Write the chunk of data to another location */ + offset[0] = 0; + offset[1] = 0; + if(H5Dwrite_chunk(dset, H5P_DEFAULT, flt_msk, offset, CHK_SIZE, direct_buf) < 0) + TEST_ERROR; + + /* Get and verify that two chunks had been written */ + if(H5Dget_num_chunks(dset, dspace, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, TWO_CHUNKS_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of the first written chunk in the dataset, its + offset should be (0,0) */ + if(verify_get_chunk_info(dset, H5S_ALL, 0, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification H5Dget_chunk_info failed\n"); + + /* Get and verify info of the chunk at the offset (0,0) */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + + /* Get and verify info of the second written chunk in the dataset, its + offset should be (CHUNK_NX, CHUNK_NY) */ + offset[0] = CHUNK_NX; + offset[1] = CHUNK_NY; + if(verify_get_chunk_info(dset, H5S_ALL, 1, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification H5Dget_chunk_info failed\n"); + + /* Get and verify info of the chunk at the offset (CHUNK_NX, CHUNK_NY) */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + + /* Get and verify info of an empty chunk, at offset + (2*CHUNK_NX, 2*CHUNK_NY) */ + offset[0] = 2*CHUNK_NX; + offset[1] = 2*CHUNK_NY; + /* Get and verify info of the chunk at the offset (CHUNK_NX, CHUNK_NY) */ + if(verify_empty_chunk_info(dset, offset) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord on empty chunk failed\n"); + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Pclose(cparms) < 0) TEST_ERROR + if(H5Fclose(basicfile) < 0) TEST_ERROR + + /* Remove the test file */ + remove(filename); + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Pclose(cparms); + H5Fclose(basicfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_basic_query() */ + +/*------------------------------------------------------------------------- + * Function: test_failed_attempts + * + * Purpose: Test attempting to use chunk query functions incorrectly. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Date: August 2019 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_failed_attempts(const char *filename, hid_t fapl) +{ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hsize_t dims[2] = {NX, NY};/* Dataset dimensions */ + int data_buf[NX][NY]; /* Input buffer */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2]; /* Offset coordinates of a chunk */ + hsize_t out_offset[2] = {0, 0}; /* Buffer to get offset coordinates */ + hsize_t size = 0; /* Size of an allocated/written chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + haddr_t addr = 0; /* Address of an allocated/written chunk */ + hsize_t chk_index = 0; /* Index of a chunk */ + hsize_t ii, jj; /* Array indices */ + herr_t ret; /* Temporary returned value for verifying failure */ + + TESTING(" Invalid Operations"); + + /* Open the file for reading/writing */ + if((chunkfile = H5Fopen(filename, H5F_ACC_RDWR, fapl)) < 0) + TEST_ERROR + + /* Create dataspace */ + if((dspace = H5Screate_simple(RANK, dims, NULL)) < 0) + TEST_ERROR + + /* Create a contiguous dataset */ + dset = H5Dcreate2(chunkfile, CONTIGUOUS_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if(dset < 0) TEST_ERROR + + /* Initialize the array of data */ + for(ii = 0; ii < NX; ii++) + for(jj = 0; jj < NY; jj++) + data_buf[ii][jj] = (int)(ii*jj); + + /* Write the data */ + if(H5Dwrite(dset, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data_buf) < 0) + TEST_ERROR + + /* Close the dataset */ + if(H5Dclose(dset) < 0) TEST_ERROR + + /* Open it again to test the chunk query functions on contiguous dataset */ + if((dset = H5Dopen2(chunkfile, CONTIGUOUS_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR + + /* Attempt to get the number of chunks on contiguous dataset, should fail */ + H5E_BEGIN_TRY { + ret = H5Dget_num_chunks(dset, dspace, &nchunks); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempt a chunk query function on a contiguous dataset.") + + /* Attempt to get chunk info on contiguous data, should fail */ + chk_index = 0; + reinit_vars(&read_flt_msk, &addr, &size); + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info(dset, dspace, chk_index, out_offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempt a chunk query function on a contiguous dataset.") + + /* Attempt to get chunk info at logical coordinates (0,0) on contiguous + * dataset, should fail */ + offset[0] = 0; + offset[1] = 0; + H5E_BEGIN_TRY { + ret = H5Dget_chunk_info_by_coord(dset, offset, &read_flt_msk, &addr, &size); + } H5E_END_TRY; + if(ret != FAIL) + FAIL_PUTS_ERROR(" Attempt a chunk query function on a contiguous dataset.") + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(dspace); + H5Fclose(chunkfile); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_failed_attempts() */ + +/*------------------------------------------------------------------------- + * Function: test_get_chunk_info_v110 + * + * Purpose: Test getting various chunk information in version 1.10. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Note: Note that the dataspace argument in these new functions are + * currently not used. The functionality involved the dataspace + * will be implemented in the next version. + * + * Description: + * This function tests the new API functions added for HDFFV-10677: + * H5Dget_num_chunks, H5Dget_chunk_info, and + * H5Dget_chunk_info_by_coord for low bound beyond 1.8. + * + * Date: October 2018 + * + *------------------------------------------------------------------------- + */ +static herr_t +test_get_chunk_info_v110(hid_t fapl) +{ + char filename[FILENAME_BUF_SIZE]; /* File name */ + hid_t chunkfile = H5I_INVALID_HID; /* File ID */ + H5F_libver_t low, high; /* File format bounds */ + + TESTING("getting chunk information in file with versions 1.10 and later"); + HDprintf("\n"); /* to list sub-tests */ + + /* Set high bound to the current latest version */ + high = H5F_LIBVER_LATEST; + + /* Test getting info of chunked datasets in version combo up to 1.10 */ + for(low = H5F_LIBVER_V110; low <= H5F_LIBVER_LATEST; low++) { + /* Set version bounds for creating file */ + if(H5Pset_libver_bounds(fapl, low, high) < 0) + TEST_ERROR + + /* Create the file */ + h5_fixname(FILENAME[low], fapl, filename, sizeof filename); + chunkfile = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if(chunkfile < 0) TEST_ERROR + + /* Close the file, individual tests will re-open the file with different + libvers via the fapl */ + if(H5Fclose(chunkfile) < 0) TEST_ERROR + + /* Test getting chunk info when Single Chunk index type is used */ + if(test_chunk_info_single_chunk(filename, fapl) < 0) + TEST_ERROR + + /* Test getting chunk info when Implicit index type is used */ + if(test_chunk_info_implicit(filename, fapl) < 0) + TEST_ERROR + + /* Test getting chunk info when Fixed Array index type is used */ + if(test_chunk_info_fixed_array(filename, fapl) < 0) + TEST_ERROR + + /* Test getting chunk info when Extensible Array index type is used */ + if(test_chunk_info_extensible_array(filename, fapl) < 0) + TEST_ERROR + + /* Test getting chunk info when Version 2 B-trees index type is used */ + if(test_chunk_info_version2_btrees(filename, fapl) < 0) + TEST_ERROR + + /* Test various attempts to use the functions incorrectly */ + if(test_failed_attempts(filename, fapl) < 0) + TEST_ERROR + + } /* for low libver bound */ + + return SUCCEED; + +error: + H5_FAILED(); + return FAIL; +} /* test_get_chunk_info_v110() */ + +/*------------------------------------------------------------------------- + * Function: test_flt_msk_with_skip_compress + * + * Purpose: Test getting chunk info when compression filter is skipped. + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Date: August 2019 (based on direct_chunk.c/test_skip_compress_write1) + * + *------------------------------------------------------------------------- + */ +static herr_t +test_flt_msk_with_skip_compress(hid_t fapl) +{ + char filename[FILENAME_BUF_SIZE]; /* File name */ + hid_t filter_file = H5I_INVALID_HID; /* File ID for filter mask */ + hid_t dspace = H5I_INVALID_HID; /* Dataspace ID */ + hid_t mem_space = H5I_INVALID_HID; /* Dataspace ID */ + hid_t dset = H5I_INVALID_HID; /* Dataset ID */ + hid_t cparms = H5I_INVALID_HID; /* Creation plist */ + hid_t dxpl = H5I_INVALID_HID; /* Transfer plist */ + hsize_t dims[2] = {NX, NY}; /* Dataset dimensions */ + hsize_t maxdims[2] = {H5S_UNLIMITED, H5S_UNLIMITED}; /* 2 unlimited dims */ + hsize_t chunk_dims[2] = {CHUNK_NX, CHUNK_NY}; /* Chunk dimensions */ + int direct_buf[CHUNK_NX][CHUNK_NY]; /* One chunk of data */ + int check_chunk[CHUNK_NX][CHUNK_NY]; /* Buffer to read data in */ + int read_direct_buf[CHUNK_NX][CHUNK_NY]; /* Buffer to read a chunk */ + hsize_t read_buf_size = 0; /* buf size */ + unsigned flt_msk = 0; /* Filter mask */ + unsigned read_flt_msk = 0; /* Filter mask after direct read */ + hsize_t offset[2] = {0, 0}; /* Offset coordinates of a chunk */ + hsize_t nchunks = 0; /* Number of chunks */ + hsize_t chk_index = 0; /* Index of a chunk */ + int aggression = 9; /* Compression aggression setting */ + hsize_t start[2]; /* Start of hyperslab */ + hsize_t stride[2]; /* Stride of hyperslab */ + hsize_t count[2]; /* Block count */ + hsize_t block[2]; /* Block sizes */ + int ii, jj; /* Array indices */ + + TESTING("getting filter mask when compression filter is skipped"); + + /* Create the file */ + h5_fixname(FILTERMASK_FILE, fapl, filename, sizeof filename); + + /* Create a new file. */ + if((filter_file = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) + TEST_ERROR; + + /* Create file data space with unlimited dimensions. */ + if((dspace = H5Screate_simple(RANK, dims, maxdims)) < 0) + TEST_ERROR; + + /* Create memory data space. */ + if((mem_space = H5Screate_simple(RANK, chunk_dims, NULL)) < 0) + TEST_ERROR; + + /* Create dataset create property list with chunking and compression + enabled. */ + if((cparms = H5Pcreate(H5P_DATASET_CREATE)) < 0) + TEST_ERROR; + + if(H5Pset_chunk( cparms, RANK, chunk_dims) < 0) + TEST_ERROR; + + if(H5Pset_deflate( cparms, (unsigned ) aggression) < 0) + TEST_ERROR; + + /* Create a new dataset using cparms creation properties. */ + if((dset = H5Dcreate2(filter_file, SKIP_FILTER_DSET_NAME, H5T_NATIVE_INT, dspace, H5P_DEFAULT, cparms, H5P_DEFAULT)) < 0) + TEST_ERROR; + + /* Create transfer property list for writing */ + if((dxpl = H5Pcreate(H5P_DATASET_XFER)) < 0) + TEST_ERROR; + + /* Initialize data for one chunk */ + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + direct_buf[ii][jj] = (int)(ii*jj); + + /* Indicate the compression filter is to be skipped. */ + flt_msk = 0x00000001; + + /* Write a chunk of uncompressed data */ + offset[0] = CHUNK_NX; + offset[1] = CHUNK_NY; + if(H5Dwrite_chunk(dset, H5P_DEFAULT, flt_msk, offset, CHK_SIZE, direct_buf) < 0) + TEST_ERROR; + + if(H5Fflush(dset, H5F_SCOPE_LOCAL) < 0) + TEST_ERROR; + + /* Close and re-open the dataset */ + if(H5Dclose(dset) < 0) + TEST_ERROR; + if((dset = H5Dopen2(filter_file, SKIP_FILTER_DSET_NAME, H5P_DEFAULT)) < 0) + TEST_ERROR; + + /* Select hyperslab for the chunk just written in the file */ + start[0] = CHUNK_NX; start[1] = CHUNK_NY; + stride[0] = 1; stride[1] = 1; + count[0] = 1; count[1] = 1; + block[0] = CHUNK_NX; block[1] = CHUNK_NY; + if(H5Sselect_hyperslab(dspace, H5S_SELECT_SET, start, stride, count, block) < 0) + TEST_ERROR; + + /* Read the chunk back */ + if(H5Dread(dset, H5T_NATIVE_INT, mem_space, dspace, H5P_DEFAULT, check_chunk) < 0) + TEST_ERROR; + + /* Check that the values read are the same as the values written */ + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + if(direct_buf[ii][jj] != check_chunk[ii][jj]) { + HDprintf(" 1. Read different values than written."); + HDprintf(" At index %d,%d\n", ii, jj); + HDprintf(" direct_buf=%d, check_chunk=%d\n", direct_buf[ii][jj], check_chunk[ii][jj]); + TEST_ERROR; + } + + /* Query chunk storage size */ + if(H5Dget_chunk_storage_size(dset, offset, &read_buf_size) < 0) + TEST_ERROR; + if(read_buf_size != CHK_SIZE) + TEST_ERROR; + + /* Read the raw chunk back with H5Dread_chunk */ + HDmemset(&read_direct_buf, 0, sizeof(read_direct_buf)); + if(H5Dread_chunk(dset, H5P_DEFAULT, offset, &read_flt_msk, read_direct_buf) < 0) + TEST_ERROR; + if(read_flt_msk != flt_msk) + TEST_ERROR; + + /* Check that the direct chunk read is the same as the chunk written */ + for(ii = 0; ii < CHUNK_NX; ii++) + for(jj = 0; jj < CHUNK_NY; jj++) + if(direct_buf[ii][jj] != read_direct_buf[ii][jj]) { + HDprintf(" 1. Read different values than written."); + HDprintf(" At index %d,%d\n", ii, jj); + HDprintf(" direct_buf=%d, read_direct_buf=%d\n", direct_buf[ii][jj], read_direct_buf[ii][jj]); + TEST_ERROR; + } + + /* Get and verify the number of chunks written */ + if(H5Dget_num_chunks(dset, H5S_ALL, &nchunks) < 0) TEST_ERROR + VERIFY(nchunks, ONE_CHUNK_WRITTEN, "H5Dget_num_chunks, number of chunks"); + + /* Get and verify info of the first and only chunk */ + chk_index = 0; + offset[0] = CHUNK_NX; + offset[1] = CHUNK_NY; + if(verify_get_chunk_info(dset, H5S_ALL, chk_index, CHK_SIZE, offset, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info failed\n"); + + /* Get info of the chunk at the specified offsets and verify its info */ + if(verify_get_chunk_info_by_coord(dset, offset, CHK_SIZE, flt_msk) == FAIL) + FAIL_PUTS_ERROR("Verification of H5Dget_chunk_info_by_coord failed\n"); + + /* Release resourse */ + if(H5Dclose(dset) < 0) TEST_ERROR + if(H5Sclose(mem_space) < 0) TEST_ERROR + if(H5Sclose(dspace) < 0) TEST_ERROR + if(H5Pclose(cparms) < 0) TEST_ERROR + if(H5Pclose(dxpl) < 0) TEST_ERROR + if(H5Fclose(filter_file) < 0) TEST_ERROR + + /* Remove the test file */ + remove(filename); + + PASSED(); + return SUCCEED; + +error: + H5E_BEGIN_TRY { + H5Dclose(dset); + H5Sclose(mem_space); + H5Sclose(dspace); + H5Pclose(cparms); + H5Pclose(dxpl); + H5Fclose(filter_file); + } H5E_END_TRY; + + H5_FAILED(); + return FAIL; +} /* test_flt_msk_with_skip_compress() */ + +/*------------------------------------------------------------------------- + * Function: main + * + * Purpose: Tests functions related to chunk information + * + * Return: Success: SUCCEED + * Failure: FAIL + * + * Programmer: Binh-Minh Ribler + * November 5, 2018 + * + *------------------------------------------------------------------------- + */ +int +main(void) +{ + hid_t fapl = H5I_INVALID_HID; /* File access property list */ + int nerrors = 0; /* Number of errors so far */ + + h5_reset(); + + /* Create a copy of file access property list */ + if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) TEST_ERROR + + /* Test basic operations on the chunk query functions */ + nerrors += test_basic_query(fapl) < 0 ? 1 : 0; + + /* Tests getting chunk information of version 1.8 and prior */ + nerrors += test_get_chunk_info_highest_v18(fapl) < 0 ? 1 : 0; + + /* Tests getting chunk information of version 1.10 */ + nerrors += test_get_chunk_info_v110(fapl) < 0 ? 1 : 0; + + /* Tests getting filter mask when compression filter is skipped */ + nerrors += test_flt_msk_with_skip_compress(fapl) < 0 ? 1 : 0; + + if(nerrors) + TEST_ERROR + + HDprintf("All chunk query tests passed.\n"); + + h5_cleanup(FILENAME, fapl); + + return SUCCEED; + +error: + nerrors = MAX(1, nerrors); + HDprintf("***** %d QUERY CHUNK INFO TEST%s FAILED! *****\n", + nerrors, 1 == nerrors ? "" : "S"); + return FAIL; +} + +/**************************************************************************** + Additional tests to be added: +- do the query when extending the dataset (shrink or expand) +- verify that invalid input parameters are handled properly + +****************************************************************************/ |