diff options
Diffstat (limited to 'test/tvltypes.c')
| -rw-r--r-- | test/tvltypes.c | 482 |
1 files changed, 476 insertions, 6 deletions
diff --git a/test/tvltypes.c b/test/tvltypes.c index 22f490b..08272f2 100644 --- a/test/tvltypes.c +++ b/test/tvltypes.c @@ -41,14 +41,58 @@ static char RcsId[] = "$Revision$"; #define SPACE2_DIM1 10 #define SPACE2_DIM2 10 +void *test_vltypes_alloc_custom(size_t size, void *info); +void test_vltypes_free_custom(void *mem, void *info); + +/**************************************************************** +** +** test_vltypes_alloc_custom(): Test VL datatype custom memory +** allocation routines. This routine just uses malloc to +** allocate the memory and increments the amount of memory +** allocated. +** +****************************************************************/ +void *test_vltypes_alloc_custom(size_t size, void *info) +{ + void *ret_value=NULL; /* Pointer to return */ + int *mem_used=(int *)info; /* Get the pointer to the memory used */ + + if((ret_value=HDmalloc(sizeof(int)+size))!=NULL) { + *(int *)ret_value=size; + *mem_used+=size; + } /* end if */ + ret_value=((unsigned char *)ret_value)+sizeof(int); + return(ret_value); +} + /**************************************************************** ** -** test_vltypes_atomic(): Test basic VL datatype code. +** test_vltypes_free_custom(): Test VL datatype custom memory +** allocation routines. This routine just uses free to +** release the memory and decrements the amount of memory +** allocated. +** +****************************************************************/ +void test_vltypes_free_custom(void *_mem, void *info) +{ + unsigned char *mem; + int *mem_used=(int *)info; /* Get the pointer to the memory used */ + + if(_mem!=NULL) { + mem=((unsigned char *)_mem)-sizeof(int); + *mem_used-=*(int *)mem; + HDfree(mem); + } /* end if */ +} + +/**************************************************************** +** +** test_vltypes_vlen_atomic(): Test basic VL datatype code. ** Tests VL datatypes of atomic datatypes ** ****************************************************************/ static void -test_vltypes_atomic(void) +test_vltypes_vlen_atomic(void) { hvl_t wdata[SPACE1_DIM1]; /* Information to write */ hvl_t rdata[SPACE1_DIM1]; /* Information read in */ @@ -56,12 +100,14 @@ test_vltypes_atomic(void) hid_t dataset; /* Dataset ID */ hid_t sid1; /* Dataspace ID */ hid_t tid1; /* Datatype ID */ + hid_t xfer_pid; /* Dataset transfer property list ID */ hsize_t dims1[] = {SPACE1_DIM1}; uintn i,j; /* counting variables */ + int mem_used=0; /* Memory used during allocation */ herr_t ret; /* Generic return value */ /* Output message about test being performed */ - MESSAGE(5, ("Testing Basic VL Datatype Functionality\n")); + MESSAGE(5, ("Testing Basic Atomic VL Datatype Functionality\n")); /* Allocate and initialize VL data to write */ for(i=0; i<SPACE1_DIM1; i++) { @@ -91,10 +137,21 @@ test_vltypes_atomic(void) ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata); CHECK(ret, FAIL, "H5Dwrite"); + /* Change to the custom memory allocation routines for reading VL data */ + xfer_pid=H5Pcreate(H5P_DATASET_XFER); + CHECK(xfer_pid, FAIL, "H5Pcreate"); + + ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used); + CHECK(ret, FAIL, "H5Pset_vlen_mem_manager"); + /* Read dataset from disk */ - ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,rdata); + ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata); CHECK(ret, FAIL, "H5Dread"); + /* Make certain the correct amount of memory has been used */ + /* 10 elements allocated = 1 + 2 + 3 + 4 elements for each array position */ + VERIFY(mem_used,10*sizeof(uint32_t),"H5Dread"); + /* Compare data read in */ for(i=0; i<SPACE1_DIM1; i++) { if(wdata[i].len!=rdata[i].len) { @@ -111,6 +168,142 @@ test_vltypes_atomic(void) } /* end for */ } /* end for */ + /* Reclaim the VL data */ + ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dvlen_reclaim"); + + /* Make certain the VL memory has been freed */ + VERIFY(mem_used,0,"H5Dvlen_reclaim"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close datatype */ + ret = H5Tclose(tid1); + CHECK(ret, FAIL, "H5Tclose"); + + /* Close disk dataspace */ + ret = H5Sclose(sid1); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + +} /* end test_vltypes_vlen_atomic() */ + +/**************************************************************** +** +** test_vltypes_vlen_compound(): Test basic VL datatype code. +** Tests VL datatypes of compound datatypes +** +****************************************************************/ +static void +test_vltypes_vlen_compound(void) +{ + typedef struct { /* Struct that the VL sequences are composed of */ + int i; + float f; + } s1; + hvl_t wdata[SPACE1_DIM1]; /* Information to write */ + hvl_t rdata[SPACE1_DIM1]; /* Information read in */ + hid_t fid1; /* HDF5 File IDs */ + hid_t dataset; /* Dataset ID */ + hid_t sid1; /* Dataspace ID */ + hid_t tid1, tid2; /* Datatype IDs */ + hid_t xfer_pid; /* Dataset transfer property list ID */ + hsize_t dims1[] = {SPACE1_DIM1}; + uintn i,j; /* counting variables */ + int mem_used=0; /* Memory used during allocation */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing Basic Compound VL Datatype Functionality\n")); + + /* Allocate and initialize VL data to write */ + for(i=0; i<SPACE1_DIM1; i++) { + wdata[i].p=malloc((i+1)*sizeof(s1)); + wdata[i].len=i+1; + for(j=0; j<(i+1); j++) { + ((s1 *)wdata[i].p)[j].i=i*10+j; + ((s1 *)wdata[i].p)[j].f=(i*20+j)/3.0; + } /* end for */ + } /* end for */ + + /* Create file */ + fid1 = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(fid1, FAIL, "H5Fcreate"); + + /* Create dataspace for datasets */ + sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); + CHECK(sid1, FAIL, "H5Screate_simple"); + + /* Create the base compound type */ + tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1)); + CHECK(tid2, FAIL, "H5Tcreate"); + + /* Insert fields */ + ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT); + CHECK(ret, FAIL, "H5Tinsert"); + ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT); + CHECK(ret, FAIL, "H5Tinsert"); + + /* Create a datatype to refer to */ + tid1 = H5Tvlen_create (tid2); + CHECK(tid1, FAIL, "H5Tvlen_create"); + + /* Create a dataset */ + dataset=H5Dcreate(fid1,"Dataset1",tid1,sid1,H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dcreate"); + + /* Write dataset to disk */ + ret=H5Dwrite(dataset,tid1,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata); + CHECK(ret, FAIL, "H5Dwrite"); + + /* Change to the custom memory allocation routines for reading VL data */ + xfer_pid=H5Pcreate(H5P_DATASET_XFER); + CHECK(xfer_pid, FAIL, "H5Pcreate"); + + ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used); + CHECK(ret, FAIL, "H5Pset_vlen_mem_manager"); + + /* Read dataset from disk */ + ret=H5Dread(dataset,tid1,H5S_ALL,H5S_ALL,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dread"); + + /* Make certain the correct amount of memory has been used */ + /* 10 elements allocated = 1 + 2 + 3 + 4 elements for each array position */ + VERIFY(mem_used,10*sizeof(s1),"H5Dread"); + + /* Compare data read in */ + for(i=0; i<SPACE1_DIM1; i++) { + if(wdata[i].len!=rdata[i].len) { + num_errs++; + printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len); + continue; + } /* end if */ + for(j=0; j<rdata[i].len; j++) { + if( ((s1 *)wdata[i].p)[j].i != ((s1 *)rdata[i].p)[j].i ) { + num_errs++; + printf("VL data values don't match!, wdata[%d].p[%d].i=%d, rdata[%d].p[%d].i=%d\n",(int)i,(int)j, (int)((s1 *)wdata[i].p)[j].i, (int)i,(int)j, (int)((s1 *)rdata[i].p)[j].i); + continue; + } /* end if */ + if( ((s1 *)wdata[i].p)[j].f != ((s1 *)rdata[i].p)[j].f ) { + num_errs++; + printf("VL data values don't match!, wdata[%d].p[%d].f=%f, rdata[%d].p[%d].f=%f\n",(int)i,(int)j, (double)((s1 *)wdata[i].p)[j].f, (int)i,(int)j, (double)((s1 *)rdata[i].p)[j].f); + continue; + } /* end if */ + } /* end for */ + } /* end for */ + + /* Reclaim the VL data */ + ret=H5Dvlen_reclaim(tid1,sid1,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dvlen_reclaim"); + + /* Make certain the VL memory has been freed */ + VERIFY(mem_used,0,"H5Dvlen_reclaim"); + /* Close Dataset */ ret = H5Dclose(dataset); CHECK(ret, FAIL, "H5Dclose"); @@ -119,6 +312,280 @@ test_vltypes_atomic(void) ret = H5Tclose(tid1); CHECK(ret, FAIL, "H5Tclose"); + /* Close datatype */ + ret = H5Tclose(tid2); + CHECK(ret, FAIL, "H5Tclose"); + + /* Close disk dataspace */ + ret = H5Sclose(sid1); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + +} /* end test_vltypes_vlen_compound() */ + +/**************************************************************** +** +** test_vltypes_compound_vlen_atomic(): Test basic VL datatype code. +** Tests compound datatypes with VL datatypes of atomic datatypes. +** +****************************************************************/ +static void +test_vltypes_compound_vlen_atomic(void) +{ + typedef struct { /* Struct that the VL sequences are composed of */ + int i; + float f; + hvl_t v; + } s1; + s1 wdata[SPACE1_DIM1]; /* Information to write */ + s1 rdata[SPACE1_DIM1]; /* Information read in */ + hid_t fid1; /* HDF5 File IDs */ + hid_t dataset; /* Dataset ID */ + hid_t sid1; /* Dataspace ID */ + hid_t tid1, tid2; /* Datatype IDs */ + hid_t xfer_pid; /* Dataset transfer property list ID */ + hsize_t dims1[] = {SPACE1_DIM1}; + uintn i,j; /* counting variables */ + int mem_used=0; /* Memory used during allocation */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing Compound Datatypes with VL Atomic Datatype Component Functionality\n")); + + /* Allocate and initialize VL data to write */ + for(i=0; i<SPACE1_DIM1; i++) { + wdata[i].i=i*10; + wdata[i].f=(i*20)/3.0; + wdata[i].v.p=malloc((i+1)*sizeof(uint32_t)); + wdata[i].v.len=i+1; + for(j=0; j<(i+1); j++) + ((uint32_t *)wdata[i].v.p)[j]=i*10+j; + } /* end for */ + + /* Create file */ + fid1 = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(fid1, FAIL, "H5Fcreate"); + + /* Create dataspace for datasets */ + sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); + CHECK(sid1, FAIL, "H5Screate_simple"); + + /* Create a VL datatype to refer to */ + tid1 = H5Tvlen_create (H5T_NATIVE_UINT); + CHECK(tid1, FAIL, "H5Tvlen_create"); + + /* Create the base compound type */ + tid2 = H5Tcreate(H5T_COMPOUND, sizeof(s1)); + CHECK(tid2, FAIL, "H5Tcreate"); + + /* Insert fields */ + ret=H5Tinsert(tid2, "i", HOFFSET(s1, i), H5T_NATIVE_INT); + CHECK(ret, FAIL, "H5Tinsert"); + ret=H5Tinsert(tid2, "f", HOFFSET(s1, f), H5T_NATIVE_FLOAT); + CHECK(ret, FAIL, "H5Tinsert"); + ret=H5Tinsert(tid2, "v", HOFFSET(s1, v), tid1); + CHECK(ret, FAIL, "H5Tinsert"); + + /* Create a dataset */ + dataset=H5Dcreate(fid1,"Dataset1",tid2,sid1,H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dcreate"); + + /* Write dataset to disk */ + ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata); + CHECK(ret, FAIL, "H5Dwrite"); + + /* Change to the custom memory allocation routines for reading VL data */ + xfer_pid=H5Pcreate(H5P_DATASET_XFER); + CHECK(xfer_pid, FAIL, "H5Pcreate"); + + ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used); + CHECK(ret, FAIL, "H5Pset_vlen_mem_manager"); + + /* Read dataset from disk */ + ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dread"); + + /* Make certain the correct amount of memory has been used */ + /* 10 elements allocated = 1 + 2 + 3 + 4 elements for each array position */ + VERIFY(mem_used,10*sizeof(uint32_t),"H5Dread"); + + /* Compare data read in */ + for(i=0; i<SPACE1_DIM1; i++) { + if(wdata[i].i!=rdata[i].i) { + num_errs++; + printf("Integer components don't match!, wdata[%d].i=%d, rdata[%d].i=%d\n",(int)i,(int)wdata[i].i,(int)i,(int)rdata[i].i); + continue; + } /* end if */ + if(wdata[i].f!=rdata[i].f) { + num_errs++; + printf("Float components don't match!, wdata[%d].f=%f, rdata[%d].f=%f\n",(int)i,(double)wdata[i].f,(int)i,(double)rdata[i].f); + continue; + } /* end if */ + if(wdata[i].v.len!=rdata[i].v.len) { + num_errs++; + printf("VL data length don't match!, wdata[%d].v.len=%d, rdata[%d].v.len=%d\n",(int)i,(int)wdata[i].v.len,(int)i,(int)rdata[i].v.len); + continue; + } /* end if */ + for(j=0; j<rdata[i].v.len; j++) { + if( ((uint32_t *)wdata[i].v.p)[j] != ((uint32_t *)rdata[i].v.p)[j] ) { + num_errs++; + printf("VL data values don't match!, wdata[%d].v.p[%d]=%d, rdata[%d].v.p[%d]=%d\n",(int)i,(int)j, (int)((uint32_t *)wdata[i].v.p)[j], (int)i,(int)j, (int)((uint32_t *)rdata[i].v.p)[j]); + continue; + } /* end if */ + } /* end for */ + } /* end for */ + + /* Reclaim the VL data */ + ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dvlen_reclaim"); + + /* Make certain the VL memory has been freed */ + VERIFY(mem_used,0,"H5Dvlen_reclaim"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close datatype */ + ret = H5Tclose(tid2); + CHECK(ret, FAIL, "H5Tclose"); + + /* Close datatype */ + ret = H5Tclose(tid1); + CHECK(ret, FAIL, "H5Tclose"); + + /* Close disk dataspace */ + ret = H5Sclose(sid1); + CHECK(ret, FAIL, "H5Sclose"); + + /* Close file */ + ret = H5Fclose(fid1); + CHECK(ret, FAIL, "H5Fclose"); + +} /* end test_vltypes_compound_vlen_atomic() */ + +/**************************************************************** +** +** test_vltypes_vlen_vlen_atomic(): Test basic VL datatype code. +** Tests VL datatype with VL datatypes of atomic datatypes. +** +****************************************************************/ +static void +test_vltypes_vlen_vlen_atomic(void) +{ + hvl_t wdata[SPACE1_DIM1]; /* Information to write */ + hvl_t rdata[SPACE1_DIM1]; /* Information read in */ + hvl_t *t1, *t2; /* Temporary pointer to VL information */ + hid_t fid1; /* HDF5 File IDs */ + hid_t dataset; /* Dataset ID */ + hid_t sid1; /* Dataspace ID */ + hid_t tid1, tid2; /* Datatype IDs */ + hid_t xfer_pid; /* Dataset transfer property list ID */ + hsize_t dims1[] = {SPACE1_DIM1}; + uintn i,j,k; /* counting variables */ + int mem_used=0; /* Memory used during allocation */ + herr_t ret; /* Generic return value */ + + /* Output message about test being performed */ + MESSAGE(5, ("Testing VL Datatypes with VL Atomic Datatype Component Functionality\n")); + + /* Allocate and initialize VL data to write */ + for(i=0; i<SPACE1_DIM1; i++) { + wdata[i].p=malloc((i+1)*sizeof(hvl_t)); + wdata[i].len=i+1; + for(t1=wdata[i].p,j=0; j<(i+1); j++, t1++) { + t1->p=malloc((j+1)*sizeof(uint32_t)); + t1->len=j+1; + for(k=0; k<(j+1); k++) + ((uint32_t *)t1->p)[k]=i*100+j*10+k; + } /* end for */ + } /* end for */ + + /* Create file */ + fid1 = H5Fcreate(FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + CHECK(fid1, FAIL, "H5Fcreate"); + + /* Create dataspace for datasets */ + sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL); + CHECK(sid1, FAIL, "H5Screate_simple"); + + /* Create a VL datatype to refer to */ + tid1 = H5Tvlen_create (H5T_NATIVE_UINT); + CHECK(tid1, FAIL, "H5Tvlen_create"); + + /* Create the base VL type */ + tid2 = H5Tvlen_create (tid1); + CHECK(tid2, FAIL, "H5Tvlen_create"); + + /* Create a dataset */ + dataset=H5Dcreate(fid1,"Dataset1",tid2,sid1,H5P_DEFAULT); + CHECK(dataset, FAIL, "H5Dcreate"); + + /* Write dataset to disk */ + ret=H5Dwrite(dataset,tid2,H5S_ALL,H5S_ALL,H5P_DEFAULT,wdata); + CHECK(ret, FAIL, "H5Dwrite"); + + /* Change to the custom memory allocation routines for reading VL data */ + xfer_pid=H5Pcreate(H5P_DATASET_XFER); + CHECK(xfer_pid, FAIL, "H5Pcreate"); + + ret=H5Pset_vlen_mem_manager(xfer_pid,test_vltypes_alloc_custom,&mem_used,test_vltypes_free_custom,&mem_used); + CHECK(ret, FAIL, "H5Pset_vlen_mem_manager"); + + /* Read dataset from disk */ + ret=H5Dread(dataset,tid2,H5S_ALL,H5S_ALL,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dread"); + + /* Make certain the correct amount of memory has been used */ + /* 10 hvl_t elements allocated = 1 + 2 + 3 + 4 elements for each array position */ + /* 20 uint32_t elements allocated = 1 + 3 + 6 + 10 elements */ + VERIFY(mem_used,10*sizeof(hvl_t)+20*sizeof(uint32_t),"H5Dread"); + + /* Compare data read in */ + for(i=0; i<SPACE1_DIM1; i++) { + if(wdata[i].len!=rdata[i].len) { + num_errs++; + printf("VL data length don't match!, wdata[%d].len=%d, rdata[%d].len=%d\n",(int)i,(int)wdata[i].len,(int)i,(int)rdata[i].len); + continue; + } /* end if */ + for(t1=wdata[i].p, t2=rdata[i].p, j=0; j<rdata[i].len; j++, t1++, t2++) { + if(t1->len!=t2->len) { + num_errs++; + printf("VL data length don't match!, i=%d, j=%d, t1->len=%d, t2->len=%d\n",(int)i,(int)j,(int)t1->len,(int)t2->len); + continue; + } /* end if */ + for(k=0; k<t2->len; k++) { + if( ((uint32_t *)t1->p)[k] != ((uint32_t *)t2->p)[k] ) { + num_errs++; + printf("VL data values don't match!, t1->p[%d]=%d, t2->p[%d]=%d\n",(int)k, (int)((uint32_t *)t1->p)[k], (int)k, (int)((uint32_t *)t2->p)[k]); + continue; + } /* end if */ + } /* end for */ + } /* end for */ + } /* end for */ + + /* Reclaim all the (nested) VL data */ + ret=H5Dvlen_reclaim(tid2,sid1,xfer_pid,rdata); + CHECK(ret, FAIL, "H5Dvlen_reclaim"); + + /* Make certain the VL memory has been freed */ + VERIFY(mem_used,0,"H5Dvlen_reclaim"); + + /* Close Dataset */ + ret = H5Dclose(dataset); + CHECK(ret, FAIL, "H5Dclose"); + + /* Close datatype */ + ret = H5Tclose(tid2); + CHECK(ret, FAIL, "H5Tclose"); + + /* Close datatype */ + ret = H5Tclose(tid1); + CHECK(ret, FAIL, "H5Tclose"); + /* Close disk dataspace */ ret = H5Sclose(sid1); CHECK(ret, FAIL, "H5Sclose"); @@ -127,7 +594,7 @@ test_vltypes_atomic(void) ret = H5Fclose(fid1); CHECK(ret, FAIL, "H5Fclose"); -} /* end test_vltypes_atomic() */ +} /* end test_vltypes_vlen_vlen_atomic() */ /**************************************************************** ** @@ -141,7 +608,10 @@ test_vltypes(void) MESSAGE(5, ("Testing Variable-Length Datatypes\n")); /* These next tests use the same file */ - test_vltypes_atomic(); /* Test basic VL datatype code */ + test_vltypes_vlen_atomic(); /* Test VL atomic datatypes */ + test_vltypes_vlen_compound(); /* Test VL compound datatypes */ + test_vltypes_compound_vlen_atomic(); /* Test compound datatypes with VL atomic components */ + test_vltypes_vlen_vlen_atomic(); /* Test VL datatype with VL atomic components */ } /* test_vltypes() */ |