diff options
Diffstat (limited to 'testpar/t_file.c')
-rw-r--r-- | testpar/t_file.c | 398 |
1 files changed, 203 insertions, 195 deletions
diff --git a/testpar/t_file.c b/testpar/t_file.c index 7b5acfc..7660ffe 100644 --- a/testpar/t_file.c +++ b/testpar/t_file.c @@ -17,30 +17,30 @@ #include "testphdf5.h" -#include "H5CXprivate.h" /* API Contexts */ +#include "H5CXprivate.h" /* API Contexts */ #include "H5Iprivate.h" #include "H5PBprivate.h" /* * This file needs to access private information from the H5F package. */ -#define H5AC_FRIEND /*suppress error about including H5ACpkg */ +#define H5AC_FRIEND /*suppress error about including H5ACpkg */ #include "H5ACpkg.h" -#define H5C_FRIEND /*suppress error about including H5Cpkg */ +#define H5C_FRIEND /*suppress error about including H5Cpkg */ #include "H5Cpkg.h" -#define H5F_FRIEND /*suppress error about including H5Fpkg */ +#define H5F_FRIEND /*suppress error about including H5Fpkg */ #define H5F_TESTING #include "H5Fpkg.h" -#define H5MF_FRIEND /*suppress error about including H5MFpkg */ +#define H5MF_FRIEND /*suppress error about including H5MFpkg */ #include "H5MFpkg.h" -#define NUM_DSETS 5 +#define NUM_DSETS 5 int mpi_size, mpi_rank; static int create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy); -static int open_file(const char *filename, hid_t fapl, int metadata_write_strategy, - hsize_t page_size, size_t page_buffer_size); +static int open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size, + size_t page_buffer_size); /* * test file access by communicator besides COMM_WORLD. @@ -56,79 +56,79 @@ static int open_file(const char *filename, hid_t fapl, int metadata_write_strate void test_split_comm_access(void) { - MPI_Comm comm; - MPI_Info info = MPI_INFO_NULL; - int is_old, mrc; - int newrank, newprocs; - hid_t fid; /* file IDs */ - hid_t acc_tpl; /* File access properties */ - herr_t ret; /* generic return value */ + MPI_Comm comm; + MPI_Info info = MPI_INFO_NULL; + int is_old, mrc; + int newrank, newprocs; + hid_t fid; /* file IDs */ + hid_t acc_tpl; /* File access properties */ + herr_t ret; /* generic return value */ const char *filename; filename = (const char *)GetTestParameters(); if (VERBOSE_MED) - HDprintf("Split Communicator access test on file %s\n", - filename); + HDprintf("Split Communicator access test on file %s\n", filename); /* set up MPI parameters */ - MPI_Comm_size(MPI_COMM_WORLD,&mpi_size); - MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank); - is_old = mpi_rank%2; - mrc = MPI_Comm_split(MPI_COMM_WORLD, is_old, mpi_rank, &comm); - VRFY((mrc==MPI_SUCCESS), ""); - MPI_Comm_size(comm,&newprocs); - MPI_Comm_rank(comm,&newrank); - - if (is_old){ - /* odd-rank processes */ - mrc = MPI_Barrier(comm); - VRFY((mrc==MPI_SUCCESS), ""); - }else{ - /* even-rank processes */ - int sub_mpi_rank; /* rank in the sub-comm */ - MPI_Comm_rank(comm,&sub_mpi_rank); - - /* setup file access template */ - acc_tpl = create_faccess_plist(comm, info, facc_type); - VRFY((acc_tpl >= 0), ""); - - /* create the file collectively */ - fid=H5Fcreate(filename,H5F_ACC_TRUNC,H5P_DEFAULT,acc_tpl); - VRFY((fid >= 0), "H5Fcreate succeeded"); + MPI_Comm_size(MPI_COMM_WORLD, &mpi_size); + MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank); + is_old = mpi_rank % 2; + mrc = MPI_Comm_split(MPI_COMM_WORLD, is_old, mpi_rank, &comm); + VRFY((mrc == MPI_SUCCESS), ""); + MPI_Comm_size(comm, &newprocs); + MPI_Comm_rank(comm, &newrank); + + if (is_old) { + /* odd-rank processes */ + mrc = MPI_Barrier(comm); + VRFY((mrc == MPI_SUCCESS), ""); + } + else { + /* even-rank processes */ + int sub_mpi_rank; /* rank in the sub-comm */ + MPI_Comm_rank(comm, &sub_mpi_rank); - /* Release file-access template */ - ret=H5Pclose(acc_tpl); - VRFY((ret >= 0), ""); + /* setup file access template */ + acc_tpl = create_faccess_plist(comm, info, facc_type); + VRFY((acc_tpl >= 0), ""); - /* close the file */ - ret=H5Fclose(fid); - VRFY((ret >= 0), ""); + /* create the file collectively */ + fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, acc_tpl); + VRFY((fid >= 0), "H5Fcreate succeeded"); - /* delete the test file */ - if (sub_mpi_rank == 0){ - mrc = MPI_File_delete((char *)filename, info); - /*VRFY((mrc==MPI_SUCCESS), ""); */ - } + /* Release file-access template */ + ret = H5Pclose(acc_tpl); + VRFY((ret >= 0), ""); + + /* close the file */ + ret = H5Fclose(fid); + VRFY((ret >= 0), ""); + + /* delete the test file */ + if (sub_mpi_rank == 0) { + mrc = MPI_File_delete((char *)filename, info); + /*VRFY((mrc==MPI_SUCCESS), ""); */ + } } mrc = MPI_Comm_free(&comm); - VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free succeeded"); + VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free succeeded"); mrc = MPI_Barrier(MPI_COMM_WORLD); - VRFY((mrc==MPI_SUCCESS), "final MPI_Barrier succeeded"); + VRFY((mrc == MPI_SUCCESS), "final MPI_Barrier succeeded"); } void test_page_buffer_access(void) { - hid_t file_id = -1; /* File ID */ - hid_t fcpl, fapl, fapl_self; - size_t page_count = 0; - int i, num_elements = 200; - haddr_t raw_addr, meta_addr; - int *data; - H5F_t *f = NULL; - herr_t ret; /* generic return value */ + hid_t file_id = -1; /* File ID */ + hid_t fcpl, fapl, fapl_self; + size_t page_count = 0; + int i, num_elements = 200; + haddr_t raw_addr, meta_addr; + int * data; + H5F_t * f = NULL; + herr_t ret; /* generic return value */ const char *filename; - hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ + hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank); MPI_Comm_size(MPI_COMM_WORLD, &mpi_size); @@ -136,7 +136,7 @@ test_page_buffer_access(void) filename = (const char *)GetTestParameters(); if (VERBOSE_MED) - HDprintf("Page Buffer Usage in Parallel %s\n", filename); + HDprintf("Page Buffer Usage in Parallel %s\n", filename); fapl = create_faccess_plist(MPI_COMM_WORLD, MPI_INFO_NULL, facc_type); VRFY((fapl >= 0), "create_faccess_plist succeeded"); @@ -145,15 +145,14 @@ test_page_buffer_access(void) ret = H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, 1, (hsize_t)0); VRFY((ret == 0), ""); - ret = H5Pset_file_space_page_size(fcpl, sizeof(int)*100); + ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 100); VRFY((ret == 0), ""); - ret = H5Pset_page_buffer_size(fapl, sizeof(int)*100000, 0, 0); + ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 100000, 0, 0); VRFY((ret == 0), ""); /* This should fail because collective metadata writes are not supported with page buffering */ - H5E_BEGIN_TRY { - file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl); - } H5E_END_TRY; + H5E_BEGIN_TRY { file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl); } + H5E_END_TRY; VRFY((file_id < 0), "H5Fcreate failed"); /* disable collective metadata writes for page buffering to work */ @@ -162,24 +161,26 @@ test_page_buffer_access(void) ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED); VRFY((ret == 0), ""); - ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, sizeof(int)*100, sizeof(int)*100000); + ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, sizeof(int) * 100, + sizeof(int) * 100000); VRFY((ret == 0), ""); ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY); VRFY((ret == 0), ""); - ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY, sizeof(int)*100, sizeof(int)*100000); + ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY, sizeof(int) * 100, + sizeof(int) * 100000); VRFY((ret == 0), ""); - ret = H5Pset_file_space_page_size(fcpl, sizeof(int)*100); + ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 100); VRFY((ret == 0), ""); - data = (int *) HDmalloc(sizeof(int)*(size_t)num_elements); + data = (int *)HDmalloc(sizeof(int) * (size_t)num_elements); /* intialize all the elements to have a value of -1 */ - for(i=0 ; i<num_elements ; i++) + for (i = 0; i < num_elements; i++) data[i] = -1; - /* MSC - why this stopped working ? */ + /* MSC - why this stopped working ? */ #if 0 if(MAINPROCESS) { hid_t fapl_self; @@ -292,8 +293,8 @@ test_page_buffer_access(void) MPI_Barrier(MPI_COMM_WORLD); - if(mpi_size > 1) { - ret = H5Pset_page_buffer_size(fapl, sizeof(int)*1000, 0, 0); + if (mpi_size > 1) { + ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 1000, 0, 0); VRFY((ret == 0), ""); /* collective metadata writes do not work with page buffering */ ret = H5Pset_coll_metadata_write(fapl, FALSE); @@ -313,45 +314,45 @@ test_page_buffer_access(void) VRFY((f->shared->page_buf != NULL), "Page Buffer created with 1 process"); /* allocate space for 200 raw elements */ - raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int)*(size_t)num_elements); + raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int) * (size_t)num_elements); VRFY((raw_addr != HADDR_UNDEF), ""); /* allocate space for 200 metadata elements */ - meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int)*(size_t)num_elements); + meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int) * (size_t)num_elements); VRFY((meta_addr != HADDR_UNDEF), ""); page_count = 0; - ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*(size_t)num_elements, data); + ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data); VRFY((ret == 0), ""); - ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*(size_t)num_elements, data); + ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * (size_t)num_elements, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); /* update the first 50 elements */ - for(i=0 ; i<50 ; i++) + for (i = 0; i < 50; i++) data[i] = i; - ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data); + ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); - ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data); + ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); /* update the second 50 elements */ - for(i=0 ; i<50 ; i++) - data[i] = i+50; - ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*50), sizeof(int)*50, data); + for (i = 0; i < 50; i++) + data[i] = i + 50; + ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 50), sizeof(int) * 50, data); VRFY((ret == 0), ""); - ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*50), sizeof(int)*50, data); + ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 50), sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); /* update 100 - 200 */ - for(i=0 ; i<100 ; i++) - data[i] = i+100; - ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*100), sizeof(int)*100, data); + for (i = 0; i < 100; i++) + data[i] = i + 100; + ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 100), sizeof(int) * 100, data); VRFY((ret == 0), ""); - ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*100), sizeof(int)*100, data); + ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 100), sizeof(int) * 100, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); @@ -359,51 +360,51 @@ test_page_buffer_access(void) VRFY((ret == 0), ""); /* read elements 0 - 200 */ - ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*200, data); + ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 200, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 200; i++) + for (i = 0; i < 200; i++) VRFY((data[i] == i), "Read different values than written"); - ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*200, data); + ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 200, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 200; i++) + for (i = 0; i < 200; i++) VRFY((data[i] == i), "Read different values than written"); /* read elements 0 - 50 */ - ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data); + ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 50; i++) + for (i = 0; i < 50; i++) VRFY((data[i] == i), "Read different values than written"); - ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data); + ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); page_count += 1; VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 50; i++) + for (i = 0; i < 50; i++) VRFY((data[i] == i), "Read different values than written"); MPI_Barrier(MPI_COMM_WORLD); /* reset the first 50 elements to -1*/ - for(i=0 ; i<50 ; i++) + for (i = 0; i < 50; i++) data[i] = -1; - ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data); + ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data); + ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); /* read elements 0 - 50 */ - ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data); + ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 50; i++) + for (i = 0; i < 50; i++) VRFY((data[i] == -1), "Read different values than written"); - ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data); + ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data); VRFY((ret == 0), ""); VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB"); - for (i=0; i < 50; i++) + for (i = 0; i < 50; i++) VRFY((data[i] == -1), "Read different values than written"); /* close the file */ @@ -412,12 +413,16 @@ test_page_buffer_access(void) } ret = H5Pclose(fapl); - VRFY((ret>=0), "H5Pclose succeeded"); + VRFY((ret >= 0), "H5Pclose succeeded"); ret = H5Pclose(fcpl); - VRFY((ret>=0), "H5Pclose succeeded"); + VRFY((ret >= 0), "H5Pclose succeeded"); /* Pop API context */ - if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; } + if (api_ctx_pushed) { + ret = H5CX_pop(); + VRFY((ret == 0), "H5CX_pop()"); + api_ctx_pushed = FALSE; + } HDfree(data); data = NULL; @@ -427,22 +432,22 @@ test_page_buffer_access(void) static int create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy) { - hid_t file_id, dset_id, grp_id; - hid_t sid, mem_dataspace; - hsize_t start[RANK]; - hsize_t count[RANK]; - hsize_t stride[RANK]; - hsize_t block[RANK]; - DATATYPE *data_array = NULL; - hsize_t dims[RANK], i; - hsize_t num_elements; - int k; - char dset_name[10]; - H5F_t *f = NULL; - H5C_t *cache_ptr = NULL; + hid_t file_id, dset_id, grp_id; + hid_t sid, mem_dataspace; + hsize_t start[RANK]; + hsize_t count[RANK]; + hsize_t stride[RANK]; + hsize_t block[RANK]; + DATATYPE * data_array = NULL; + hsize_t dims[RANK], i; + hsize_t num_elements; + int k; + char dset_name[10]; + H5F_t * f = NULL; + H5C_t * cache_ptr = NULL; H5AC_cache_config_t config; - hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ - herr_t ret; + hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ + herr_t ret; file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl); VRFY((file_id >= 0), ""); @@ -476,61 +481,57 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str grp_id = H5Gcreate2(file_id, "GROUP", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); VRFY((grp_id >= 0), ""); - dims[0] = ROW_FACTOR*mpi_size; - dims[1] = COL_FACTOR*mpi_size; - sid = H5Screate_simple (RANK, dims, NULL); + dims[0] = ROW_FACTOR * mpi_size; + dims[1] = COL_FACTOR * mpi_size; + sid = H5Screate_simple(RANK, dims, NULL); VRFY((sid >= 0), "H5Screate_simple succeeded"); /* Each process takes a slabs of rows. */ - block[0] = dims[0]/mpi_size; - block[1] = dims[1]; + block[0] = dims[0] / mpi_size; + block[1] = dims[1]; stride[0] = block[0]; stride[1] = block[1]; - count[0] = 1; - count[1] = 1; - start[0] = mpi_rank*block[0]; - start[1] = 0; + count[0] = 1; + count[1] = 1; + start[0] = mpi_rank * block[0]; + start[1] = 0; num_elements = block[0] * block[1]; /* allocate memory for data buffer */ - data_array = (DATATYPE *)HDmalloc(num_elements*sizeof(DATATYPE)); + data_array = (DATATYPE *)HDmalloc(num_elements * sizeof(DATATYPE)); VRFY((data_array != NULL), "data_array HDmalloc succeeded"); /* put some trivial data in the data_array */ - for(i=0 ; i<num_elements; i++) + for (i = 0; i < num_elements; i++) data_array[i] = mpi_rank + 1; ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block); VRFY((ret >= 0), "H5Sset_hyperslab succeeded"); /* create a memory dataspace independently */ - mem_dataspace = H5Screate_simple (1, &num_elements, NULL); + mem_dataspace = H5Screate_simple(1, &num_elements, NULL); VRFY((mem_dataspace >= 0), ""); - for(k=0 ; k<NUM_DSETS; k++) { + for (k = 0; k < NUM_DSETS; k++) { HDsprintf(dset_name, "D1dset%d", k); - dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); VRFY((dset_id >= 0), ""); ret = H5Dclose(dset_id); VRFY((ret == 0), ""); HDsprintf(dset_name, "D2dset%d", k); - dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); VRFY((dset_id >= 0), ""); ret = H5Dclose(dset_id); VRFY((ret == 0), ""); HDsprintf(dset_name, "D3dset%d", k); - dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); VRFY((dset_id >= 0), ""); ret = H5Dclose(dset_id); VRFY((ret == 0), ""); HDsprintf(dset_name, "dset%d", k); - dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, - H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); VRFY((dset_id >= 0), ""); ret = H5Dwrite(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, H5P_DEFAULT, data_array); @@ -539,7 +540,7 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str ret = H5Dclose(dset_id); VRFY((ret == 0), ""); - HDmemset(data_array, 0, num_elements*sizeof(DATATYPE)); + HDmemset(data_array, 0, num_elements * sizeof(DATATYPE)); dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT); VRFY((dset_id >= 0), ""); @@ -549,8 +550,8 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str ret = H5Dclose(dset_id); VRFY((ret == 0), ""); - for (i=0; i < num_elements; i++) - VRFY((data_array[i] == mpi_rank+1), "Dataset Verify failed"); + for (i = 0; i < num_elements; i++) + VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed"); HDsprintf(dset_name, "D1dset%d", k); ret = H5Ldelete(grp_id, dset_name, H5P_DEFAULT); @@ -573,7 +574,11 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str VRFY((ret == 0), ""); /* Pop API context */ - if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; } + if (api_ctx_pushed) { + ret = H5CX_pop(); + VRFY((ret == 0), "H5CX_pop()"); + api_ctx_pushed = FALSE; + } MPI_Barrier(MPI_COMM_WORLD); HDfree(data_array); @@ -581,28 +586,28 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str } /* create_file */ static int -open_file(const char *filename, hid_t fapl, int metadata_write_strategy, - hsize_t page_size, size_t page_buffer_size) +open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size, + size_t page_buffer_size) { - hid_t file_id, dset_id, grp_id, grp_id2; - hid_t sid, mem_dataspace; - DATATYPE *data_array = NULL; - hsize_t dims[RANK]; - hsize_t start[RANK]; - hsize_t count[RANK]; - hsize_t stride[RANK]; - hsize_t block[RANK]; - int i, k, ndims; - hsize_t num_elements; - char dset_name[10]; - H5F_t *f = NULL; - H5C_t *cache_ptr = NULL; + hid_t file_id, dset_id, grp_id, grp_id2; + hid_t sid, mem_dataspace; + DATATYPE * data_array = NULL; + hsize_t dims[RANK]; + hsize_t start[RANK]; + hsize_t count[RANK]; + hsize_t stride[RANK]; + hsize_t block[RANK]; + int i, k, ndims; + hsize_t num_elements; + char dset_name[10]; + H5F_t * f = NULL; + H5C_t * cache_ptr = NULL; H5AC_cache_config_t config; - hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ - herr_t ret; + hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */ + herr_t ret; config.version = H5AC__CURR_CACHE_CONFIG_VERSION; - ret = H5Pget_mdc_config(fapl, &config); + ret = H5Pget_mdc_config(fapl, &config); VRFY((ret == 0), ""); config.metadata_write_strategy = metadata_write_strategy; @@ -637,29 +642,29 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, grp_id = H5Gopen2(file_id, "GROUP", H5P_DEFAULT); VRFY((grp_id >= 0), ""); - dims[0] = ROW_FACTOR*mpi_size; - dims[1] = COL_FACTOR*mpi_size; + dims[0] = ROW_FACTOR * mpi_size; + dims[1] = COL_FACTOR * mpi_size; /* Each process takes a slabs of rows. */ - block[0] = dims[0]/mpi_size; - block[1] = dims[1]; + block[0] = dims[0] / mpi_size; + block[1] = dims[1]; stride[0] = block[0]; stride[1] = block[1]; - count[0] = 1; - count[1] = 1; - start[0] = mpi_rank*block[0]; - start[1] = 0; + count[0] = 1; + count[1] = 1; + start[0] = mpi_rank * block[0]; + start[1] = 0; num_elements = block[0] * block[1]; /* allocate memory for data buffer */ - data_array = (DATATYPE *)HDmalloc(num_elements*sizeof(DATATYPE)); + data_array = (DATATYPE *)HDmalloc(num_elements * sizeof(DATATYPE)); VRFY((data_array != NULL), "data_array HDmalloc succeeded"); /* create a memory dataspace independently */ - mem_dataspace = H5Screate_simple (1, &num_elements, NULL); + mem_dataspace = H5Screate_simple(1, &num_elements, NULL); VRFY((mem_dataspace >= 0), ""); - for(k=0 ; k<NUM_DSETS; k++) { + for (k = 0; k < NUM_DSETS; k++) { HDsprintf(dset_name, "dset%d", k); dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT); VRFY((dset_id >= 0), ""); @@ -669,8 +674,8 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, ndims = H5Sget_simple_extent_dims(sid, dims, NULL); VRFY((ndims == 2), "H5Sget_simple_extent_dims succeeded"); - VRFY(dims[0] == ROW_FACTOR*mpi_size, "Wrong dataset dimensions"); - VRFY(dims[1] == COL_FACTOR*mpi_size, "Wrong dataset dimensions"); + VRFY(dims[0] == ROW_FACTOR * mpi_size, "Wrong dataset dimensions"); + VRFY(dims[1] == COL_FACTOR * mpi_size, "Wrong dataset dimensions"); ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block); VRFY((ret >= 0), "H5Sset_hyperslab succeeded"); @@ -683,8 +688,8 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, ret = H5Sclose(sid); VRFY((ret == 0), ""); - for (i=0; i < num_elements; i++) - VRFY((data_array[i] == mpi_rank+1), "Dataset Verify failed"); + for (i = 0; i < num_elements; i++) + VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed"); } grp_id2 = H5Gcreate2(file_id, "GROUP/GROUP2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); @@ -699,16 +704,16 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, /* flush invalidate each ring, starting from the outermost ring and * working inward. */ - for ( i = 0; i < H5C__HASH_TABLE_LEN; i++ ) { - H5C_cache_entry_t * entry_ptr = NULL; + for (i = 0; i < H5C__HASH_TABLE_LEN; i++) { + H5C_cache_entry_t *entry_ptr = NULL; entry_ptr = cache_ptr->index[i]; - while ( entry_ptr != NULL ) { + while (entry_ptr != NULL) { HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC); HDassert(entry_ptr->is_dirty == FALSE); - if(!entry_ptr->is_pinned && !entry_ptr->is_protected) { + if (!entry_ptr->is_pinned && !entry_ptr->is_protected) { ret = H5AC_expunge_entry(f, entry_ptr->type, entry_ptr->addr, 0); VRFY((ret == 0), ""); } @@ -733,7 +738,11 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, VRFY((ret == 0), ""); /* Pop API context */ - if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; } + if (api_ctx_pushed) { + ret = H5CX_pop(); + VRFY((ret == 0), "H5CX_pop()"); + api_ctx_pushed = FALSE; + } HDfree(data_array); @@ -743,13 +752,13 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy, void test_file_properties(void) { - hid_t fid; /* HDF5 file ID */ - hid_t fapl_id; /* File access plist */ - hbool_t is_coll; + hid_t fid; /* HDF5 file ID */ + hid_t fapl_id; /* File access plist */ + hbool_t is_coll; const char *filename; - MPI_Comm comm = MPI_COMM_WORLD; - MPI_Info info = MPI_INFO_NULL; - herr_t ret; /* Generic return value */ + MPI_Comm comm = MPI_COMM_WORLD; + MPI_Info info = MPI_INFO_NULL; + herr_t ret; /* Generic return value */ filename = (const char *)GetTestParameters(); @@ -855,4 +864,3 @@ test_file_properties(void) ret = H5Pclose(fapl_id); VRFY((ret >= 0), "H5Pclose succeeded"); } /* end test_file_properties() */ - |