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-rw-r--r--testpar/t_file.c474
1 files changed, 243 insertions, 231 deletions
diff --git a/testpar/t_file.c b/testpar/t_file.c
index 19a75c8..4e652bf 100644
--- a/testpar/t_file.c
+++ b/testpar/t_file.c
@@ -17,30 +17,30 @@
#include "testphdf5.h"
-#include "H5CXprivate.h" /* API Contexts */
+#include "H5CXprivate.h" /* API Contexts */
#include "H5Iprivate.h"
#include "H5PBprivate.h"
/*
* This file needs to access private information from the H5F package.
*/
-#define H5AC_FRIEND /*suppress error about including H5ACpkg */
+#define H5AC_FRIEND /*suppress error about including H5ACpkg */
#include "H5ACpkg.h"
-#define H5C_FRIEND /*suppress error about including H5Cpkg */
+#define H5C_FRIEND /*suppress error about including H5Cpkg */
#include "H5Cpkg.h"
-#define H5F_FRIEND /*suppress error about including H5Fpkg */
+#define H5F_FRIEND /*suppress error about including H5Fpkg */
#define H5F_TESTING
#include "H5Fpkg.h"
-#define H5MF_FRIEND /*suppress error about including H5MFpkg */
+#define H5MF_FRIEND /*suppress error about including H5MFpkg */
#include "H5MFpkg.h"
-#define NUM_DSETS 5
+#define NUM_DSETS 5
int mpi_size, mpi_rank;
static int create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy);
-static int open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
- hsize_t page_size, size_t page_buffer_size);
+static int open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size,
+ size_t page_buffer_size);
/*
* test file access by communicator besides COMM_WORLD.
@@ -56,79 +56,79 @@ static int open_file(const char *filename, hid_t fapl, int metadata_write_strate
void
test_split_comm_access(void)
{
- MPI_Comm comm;
- MPI_Info info = MPI_INFO_NULL;
- int is_old, mrc;
- int newrank, newprocs;
- hid_t fid; /* file IDs */
- hid_t acc_tpl; /* File access properties */
- herr_t ret; /* generic return value */
+ MPI_Comm comm;
+ MPI_Info info = MPI_INFO_NULL;
+ int is_old, mrc;
+ int newrank, newprocs;
+ hid_t fid; /* file IDs */
+ hid_t acc_tpl; /* File access properties */
+ herr_t ret; /* generic return value */
const char *filename;
filename = (const char *)GetTestParameters();
if (VERBOSE_MED)
- HDprintf("Split Communicator access test on file %s\n",
- filename);
+ HDprintf("Split Communicator access test on file %s\n", filename);
/* set up MPI parameters */
- MPI_Comm_size(MPI_COMM_WORLD,&mpi_size);
- MPI_Comm_rank(MPI_COMM_WORLD,&mpi_rank);
- is_old = mpi_rank%2;
- mrc = MPI_Comm_split(MPI_COMM_WORLD, is_old, mpi_rank, &comm);
- VRFY((mrc==MPI_SUCCESS), "");
- MPI_Comm_size(comm,&newprocs);
- MPI_Comm_rank(comm,&newrank);
-
- if (is_old){
- /* odd-rank processes */
- mrc = MPI_Barrier(comm);
- VRFY((mrc==MPI_SUCCESS), "");
- }else{
- /* even-rank processes */
- int sub_mpi_rank; /* rank in the sub-comm */
- MPI_Comm_rank(comm,&sub_mpi_rank);
-
- /* setup file access template */
- acc_tpl = create_faccess_plist(comm, info, facc_type);
- VRFY((acc_tpl >= 0), "");
-
- /* create the file collectively */
- fid=H5Fcreate(filename,H5F_ACC_TRUNC,H5P_DEFAULT,acc_tpl);
- VRFY((fid >= 0), "H5Fcreate succeeded");
-
- /* Release file-access template */
- ret=H5Pclose(acc_tpl);
- VRFY((ret >= 0), "");
+ MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
+ MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
+ is_old = mpi_rank % 2;
+ mrc = MPI_Comm_split(MPI_COMM_WORLD, is_old, mpi_rank, &comm);
+ VRFY((mrc == MPI_SUCCESS), "");
+ MPI_Comm_size(comm, &newprocs);
+ MPI_Comm_rank(comm, &newrank);
+
+ if (is_old) {
+ /* odd-rank processes */
+ mrc = MPI_Barrier(comm);
+ VRFY((mrc == MPI_SUCCESS), "");
+ }
+ else {
+ /* even-rank processes */
+ int sub_mpi_rank; /* rank in the sub-comm */
+ MPI_Comm_rank(comm, &sub_mpi_rank);
- /* close the file */
- ret=H5Fclose(fid);
- VRFY((ret >= 0), "");
+ /* setup file access template */
+ acc_tpl = create_faccess_plist(comm, info, facc_type);
+ VRFY((acc_tpl >= 0), "");
- /* delete the test file */
- if (sub_mpi_rank == 0){
- mrc = MPI_File_delete((char *)filename, info);
- /*VRFY((mrc==MPI_SUCCESS), ""); */
- }
+ /* create the file collectively */
+ fid = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, acc_tpl);
+ VRFY((fid >= 0), "H5Fcreate succeeded");
+
+ /* Release file-access template */
+ ret = H5Pclose(acc_tpl);
+ VRFY((ret >= 0), "");
+
+ /* close the file */
+ ret = H5Fclose(fid);
+ VRFY((ret >= 0), "");
+
+ /* delete the test file */
+ if (sub_mpi_rank == 0) {
+ mrc = MPI_File_delete((char *)filename, info);
+ /*VRFY((mrc==MPI_SUCCESS), ""); */
+ }
}
mrc = MPI_Comm_free(&comm);
- VRFY((mrc==MPI_SUCCESS), "MPI_Comm_free succeeded");
+ VRFY((mrc == MPI_SUCCESS), "MPI_Comm_free succeeded");
mrc = MPI_Barrier(MPI_COMM_WORLD);
- VRFY((mrc==MPI_SUCCESS), "final MPI_Barrier succeeded");
+ VRFY((mrc == MPI_SUCCESS), "final MPI_Barrier succeeded");
}
void
test_page_buffer_access(void)
{
- hid_t file_id = -1; /* File ID */
- hid_t fcpl, fapl;
- size_t page_count = 0;
- int i, num_elements = 200;
- haddr_t raw_addr, meta_addr;
- int *data;
- H5F_t *f = NULL;
- herr_t ret; /* generic return value */
+ hid_t file_id = -1; /* File ID */
+ hid_t fcpl, fapl;
+ size_t page_count = 0;
+ int i, num_elements = 200;
+ haddr_t raw_addr, meta_addr;
+ int * data;
+ H5F_t * f = NULL;
+ herr_t ret; /* generic return value */
const char *filename;
- hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
+ hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
@@ -136,7 +136,7 @@ test_page_buffer_access(void)
filename = (const char *)GetTestParameters();
if (VERBOSE_MED)
- HDprintf("Page Buffer Usage in Parallel %s\n", filename);
+ HDprintf("Page Buffer Usage in Parallel %s\n", filename);
fapl = create_faccess_plist(MPI_COMM_WORLD, MPI_INFO_NULL, facc_type);
VRFY((fapl >= 0), "create_faccess_plist succeeded");
@@ -145,15 +145,14 @@ test_page_buffer_access(void)
ret = H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, 1, (hsize_t)0);
VRFY((ret == 0), "");
- ret = H5Pset_file_space_page_size(fcpl, sizeof(int)*128);
+ ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 128);
VRFY((ret == 0), "");
- ret = H5Pset_page_buffer_size(fapl, sizeof(int)*100000, 0, 0);
+ ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 100000, 0, 0);
VRFY((ret == 0), "");
/* This should fail because collective metadata writes are not supported with page buffering */
- H5E_BEGIN_TRY {
- file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl);
- } H5E_END_TRY;
+ H5E_BEGIN_TRY { file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl); }
+ H5E_END_TRY;
VRFY((file_id < 0), "H5Fcreate failed");
/* disable collective metadata writes for page buffering to work */
@@ -162,27 +161,29 @@ test_page_buffer_access(void)
ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED);
VRFY((ret == 0), "");
- ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, sizeof(int)*100, sizeof(int)*100000);
+ ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__DISTRIBUTED, sizeof(int) * 100,
+ sizeof(int) * 100000);
VRFY((ret == 0), "");
ret = create_file(filename, fcpl, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY);
VRFY((ret == 0), "");
- ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY, sizeof(int)*100, sizeof(int)*100000);
+ ret = open_file(filename, fapl, H5AC_METADATA_WRITE_STRATEGY__PROCESS_0_ONLY, sizeof(int) * 100,
+ sizeof(int) * 100000);
VRFY((ret == 0), "");
- ret = H5Pset_file_space_page_size(fcpl, sizeof(int)*100);
+ ret = H5Pset_file_space_page_size(fcpl, sizeof(int) * 100);
VRFY((ret == 0), "");
- data = (int *) HDmalloc(sizeof(int)*(size_t)num_elements);
+ data = (int *)HDmalloc(sizeof(int) * (size_t)num_elements);
/* intialize all the elements to have a value of -1 */
- for(i=0 ; i<num_elements ; i++)
+ for (i = 0; i < num_elements; i++)
data[i] = -1;
- if(MAINPROCESS) {
+ if (MAINPROCESS) {
hid_t fapl_self = H5I_INVALID_HID;
- fapl_self = create_faccess_plist(MPI_COMM_SELF, MPI_INFO_NULL, facc_type);
+ fapl_self = create_faccess_plist(MPI_COMM_SELF, MPI_INFO_NULL, facc_type);
- ret = H5Pset_page_buffer_size(fapl_self, sizeof(int)*1000, 0, 0);
+ ret = H5Pset_page_buffer_size(fapl_self, sizeof(int) * 1000, 0, 0);
VRFY((ret == 0), "");
/* collective metadata writes do not work with page buffering */
ret = H5Pset_coll_metadata_write(fapl_self, FALSE);
@@ -202,49 +203,49 @@ test_page_buffer_access(void)
VRFY((f->shared->page_buf != NULL), "Page Buffer created with 1 process");
/* allocate space for 200 raw elements */
- raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int)*(size_t)num_elements);
+ raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int) * (size_t)num_elements);
VRFY((raw_addr != HADDR_UNDEF), "");
/* allocate space for 200 metadata elements */
- meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int)*(size_t)num_elements);
+ meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int) * (size_t)num_elements);
VRFY((meta_addr != HADDR_UNDEF), "");
page_count = 0;
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*(size_t)num_elements, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*(size_t)num_elements, data);
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*(size_t)num_elements, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the first 50 elements */
- for(i=0 ; i<50 ; i++)
+ for (i = 0; i < 50; i++)
data[i] = i;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
H5Eprint2(H5E_DEFAULT, stderr);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
page_count += 2;
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the second 50 elements */
- for(i=0 ; i<50 ; i++)
- data[i] = i+50;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*50), sizeof(int)*50, data);
+ for (i = 0; i < 50; i++)
+ data[i] = i + 50;
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*50), sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update 100 - 200 */
- for(i=0 ; i<100 ; i++)
- data[i] = i+100;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*100), sizeof(int)*100, data);
+ for (i = 0; i < 100; i++)
+ data[i] = i + 100;
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*100), sizeof(int)*100, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
@@ -252,43 +253,47 @@ test_page_buffer_access(void)
VRFY((ret == 0), "");
/* read elements 0 - 200 */
- ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*200, data);
+ ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 200; i++)
+ for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
- ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*200, data);
+ ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 200; i++)
+ for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
/* read elements 0 - 50 */
- ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
- ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
/* close the file */
ret = H5Fclose(file_id);
VRFY((ret >= 0), "H5Fclose succeeded");
ret = H5Pclose(fapl_self);
- VRFY((ret>=0), "H5Pclose succeeded");
+ VRFY((ret >= 0), "H5Pclose succeeded");
/* Pop API context */
- if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; }
+ if (api_ctx_pushed) {
+ ret = H5CX_pop();
+ VRFY((ret == 0), "H5CX_pop()");
+ api_ctx_pushed = FALSE;
+ }
}
MPI_Barrier(MPI_COMM_WORLD);
- if(mpi_size > 1) {
- ret = H5Pset_page_buffer_size(fapl, sizeof(int)*1000, 0, 0);
+ if (mpi_size > 1) {
+ ret = H5Pset_page_buffer_size(fapl, sizeof(int) * 1000, 0, 0);
VRFY((ret == 0), "");
/* collective metadata writes do not work with page buffering */
ret = H5Pset_coll_metadata_write(fapl, FALSE);
@@ -308,45 +313,45 @@ test_page_buffer_access(void)
VRFY((f->shared->page_buf != NULL), "Page Buffer created with 1 process");
/* allocate space for 200 raw elements */
- raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int)*(size_t)num_elements);
+ raw_addr = H5MF_alloc(f, H5FD_MEM_DRAW, sizeof(int) * (size_t)num_elements);
VRFY((raw_addr != HADDR_UNDEF), "");
/* allocate space for 200 metadata elements */
- meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int)*(size_t)num_elements);
+ meta_addr = H5MF_alloc(f, H5FD_MEM_SUPER, sizeof(int) * (size_t)num_elements);
VRFY((meta_addr != HADDR_UNDEF), "");
page_count = 0;
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*(size_t)num_elements, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*(size_t)num_elements, data);
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * (size_t)num_elements, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the first 50 elements */
- for(i=0 ; i<50 ; i++)
+ for (i = 0; i < 50; i++)
data[i] = i;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update the second 50 elements */
- for(i=0 ; i<50 ; i++)
- data[i] = i+50;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*50), sizeof(int)*50, data);
+ for (i = 0; i < 50; i++)
+ data[i] = i + 50;
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*50), sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 50), sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* update 100 - 200 */
- for(i=0 ; i<100 ; i++)
- data[i] = i+100;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr+(sizeof(int)*100), sizeof(int)*100, data);
+ for (i = 0; i < 100; i++)
+ data[i] = i + 100;
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr+(sizeof(int)*100), sizeof(int)*100, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr + (sizeof(int) * 100), sizeof(int) * 100, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
@@ -354,51 +359,51 @@ test_page_buffer_access(void)
VRFY((ret == 0), "");
/* read elements 0 - 200 */
- ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*200, data);
+ ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 200; i++)
+ for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
- ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*200, data);
+ ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 200, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 200; i++)
+ for (i = 0; i < 200; i++)
VRFY((data[i] == i), "Read different values than written");
/* read elements 0 - 50 */
- ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
- ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
page_count += 1;
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == i), "Read different values than written");
MPI_Barrier(MPI_COMM_WORLD);
/* reset the first 50 elements to -1*/
- for(i=0 ; i<50 ; i++)
+ for (i = 0; i < 50; i++)
data[i] = -1;
- ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_write(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
/* read elements 0 - 50 */
- ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_DRAW, raw_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == -1), "Read different values than written");
- ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int)*50, data);
+ ret = H5F_block_read(f, H5FD_MEM_SUPER, meta_addr, sizeof(int) * 50, data);
VRFY((ret == 0), "");
VRFY((H5SL_count(f->shared->page_buf->slist_ptr) == page_count), "Wrong number of pages in PB");
- for (i=0; i < 50; i++)
+ for (i = 0; i < 50; i++)
VRFY((data[i] == -1), "Read different values than written");
/* close the file */
@@ -407,12 +412,16 @@ test_page_buffer_access(void)
}
ret = H5Pclose(fapl);
- VRFY((ret>=0), "H5Pclose succeeded");
+ VRFY((ret >= 0), "H5Pclose succeeded");
ret = H5Pclose(fcpl);
- VRFY((ret>=0), "H5Pclose succeeded");
+ VRFY((ret >= 0), "H5Pclose succeeded");
/* Pop API context */
- if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; }
+ if (api_ctx_pushed) {
+ ret = H5CX_pop();
+ VRFY((ret == 0), "H5CX_pop()");
+ api_ctx_pushed = FALSE;
+ }
HDfree(data);
data = NULL;
@@ -422,22 +431,22 @@ test_page_buffer_access(void)
static int
create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_strategy)
{
- hid_t file_id, dset_id, grp_id;
- hid_t sid, mem_dataspace;
- hsize_t start[RANK];
- hsize_t count[RANK];
- hsize_t stride[RANK];
- hsize_t block[RANK];
- DATATYPE *data_array = NULL;
- hsize_t dims[RANK], i;
- hsize_t num_elements;
- int k;
- char dset_name[20];
- H5F_t *f = NULL;
- H5C_t *cache_ptr = NULL;
+ hid_t file_id, dset_id, grp_id;
+ hid_t sid, mem_dataspace;
+ hsize_t start[RANK];
+ hsize_t count[RANK];
+ hsize_t stride[RANK];
+ hsize_t block[RANK];
+ DATATYPE * data_array = NULL;
+ hsize_t dims[RANK], i;
+ hsize_t num_elements;
+ int k;
+ char dset_name[20];
+ H5F_t * f = NULL;
+ H5C_t * cache_ptr = NULL;
H5AC_cache_config_t config;
- hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
- herr_t ret;
+ hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
+ herr_t ret;
file_id = H5Fcreate(filename, H5F_ACC_TRUNC, fcpl, fapl);
VRFY((file_id >= 0), "");
@@ -471,61 +480,57 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str
grp_id = H5Gcreate2(file_id, "GROUP", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((grp_id >= 0), "");
- dims[0] = (hsize_t)(ROW_FACTOR*mpi_size);
- dims[1] = (hsize_t)(COL_FACTOR*mpi_size);
- sid = H5Screate_simple (RANK, dims, NULL);
+ dims[0] = (hsize_t)(ROW_FACTOR * mpi_size);
+ dims[1] = (hsize_t)(COL_FACTOR * mpi_size);
+ sid = H5Screate_simple(RANK, dims, NULL);
VRFY((sid >= 0), "H5Screate_simple succeeded");
/* Each process takes a slabs of rows. */
- block[0] = dims[0]/(hsize_t)mpi_size;
- block[1] = dims[1];
+ block[0] = dims[0] / (hsize_t)mpi_size;
+ block[1] = dims[1];
stride[0] = block[0];
stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = (hsize_t)mpi_rank*block[0];
- start[1] = 0;
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = (hsize_t)mpi_rank * block[0];
+ start[1] = 0;
num_elements = block[0] * block[1];
/* allocate memory for data buffer */
- data_array = (DATATYPE *)HDmalloc(num_elements*sizeof(DATATYPE));
+ data_array = (DATATYPE *)HDmalloc(num_elements * sizeof(DATATYPE));
VRFY((data_array != NULL), "data_array HDmalloc succeeded");
/* put some trivial data in the data_array */
- for(i=0 ; i<num_elements; i++)
+ for (i = 0; i < num_elements; i++)
data_array[i] = mpi_rank + 1;
ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
/* create a memory dataspace independently */
- mem_dataspace = H5Screate_simple (1, &num_elements, NULL);
+ mem_dataspace = H5Screate_simple(1, &num_elements, NULL);
VRFY((mem_dataspace >= 0), "");
- for(k=0 ; k<NUM_DSETS; k++) {
+ for (k = 0; k < NUM_DSETS; k++) {
HDsprintf(dset_name, "D1dset%d", k);
- dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
HDsprintf(dset_name, "D2dset%d", k);
- dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
HDsprintf(dset_name, "D3dset%d", k);
- dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
HDsprintf(dset_name, "dset%d", k);
- dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid,
- H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ dset_id = H5Dcreate2(grp_id, dset_name, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
ret = H5Dwrite(dset_id, H5T_NATIVE_INT, mem_dataspace, sid, H5P_DEFAULT, data_array);
@@ -534,7 +539,7 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
- HDmemset(data_array, 0, num_elements*sizeof(DATATYPE));
+ HDmemset(data_array, 0, num_elements * sizeof(DATATYPE));
dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
@@ -544,8 +549,8 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str
ret = H5Dclose(dset_id);
VRFY((ret == 0), "");
- for (i=0; i < num_elements; i++)
- VRFY((data_array[i] == mpi_rank+1), "Dataset Verify failed");
+ for (i = 0; i < num_elements; i++)
+ VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed");
HDsprintf(dset_name, "D1dset%d", k);
ret = H5Ldelete(grp_id, dset_name, H5P_DEFAULT);
@@ -568,7 +573,11 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str
VRFY((ret == 0), "");
/* Pop API context */
- if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; }
+ if (api_ctx_pushed) {
+ ret = H5CX_pop();
+ VRFY((ret == 0), "H5CX_pop()");
+ api_ctx_pushed = FALSE;
+ }
MPI_Barrier(MPI_COMM_WORLD);
HDfree(data_array);
@@ -576,28 +585,28 @@ create_file(const char *filename, hid_t fcpl, hid_t fapl, int metadata_write_str
} /* create_file */
static int
-open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
- hsize_t page_size, size_t page_buffer_size)
+open_file(const char *filename, hid_t fapl, int metadata_write_strategy, hsize_t page_size,
+ size_t page_buffer_size)
{
- hid_t file_id, dset_id, grp_id, grp_id2;
- hid_t sid, mem_dataspace;
- DATATYPE *data_array = NULL;
- hsize_t dims[RANK];
- hsize_t start[RANK];
- hsize_t count[RANK];
- hsize_t stride[RANK];
- hsize_t block[RANK];
- int i, k, ndims;
- hsize_t num_elements;
- char dset_name[20];
- H5F_t *f = NULL;
- H5C_t *cache_ptr = NULL;
+ hid_t file_id, dset_id, grp_id, grp_id2;
+ hid_t sid, mem_dataspace;
+ DATATYPE * data_array = NULL;
+ hsize_t dims[RANK];
+ hsize_t start[RANK];
+ hsize_t count[RANK];
+ hsize_t stride[RANK];
+ hsize_t block[RANK];
+ int i, k, ndims;
+ hsize_t num_elements;
+ char dset_name[20];
+ H5F_t * f = NULL;
+ H5C_t * cache_ptr = NULL;
H5AC_cache_config_t config;
- hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
- herr_t ret;
+ hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
+ herr_t ret;
config.version = H5AC__CURR_CACHE_CONFIG_VERSION;
- ret = H5Pget_mdc_config(fapl, &config);
+ ret = H5Pget_mdc_config(fapl, &config);
VRFY((ret == 0), "");
config.metadata_write_strategy = metadata_write_strategy;
@@ -632,29 +641,29 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
grp_id = H5Gopen2(file_id, "GROUP", H5P_DEFAULT);
VRFY((grp_id >= 0), "");
- dims[0] = (hsize_t)(ROW_FACTOR*mpi_size);
- dims[1] = (hsize_t)(COL_FACTOR*mpi_size);
+ dims[0] = (hsize_t)(ROW_FACTOR * mpi_size);
+ dims[1] = (hsize_t)(COL_FACTOR * mpi_size);
/* Each process takes a slabs of rows. */
- block[0] = dims[0]/(hsize_t)mpi_size;
- block[1] = dims[1];
+ block[0] = dims[0] / (hsize_t)mpi_size;
+ block[1] = dims[1];
stride[0] = block[0];
stride[1] = block[1];
- count[0] = 1;
- count[1] = 1;
- start[0] = (hsize_t)mpi_rank*block[0];
- start[1] = 0;
+ count[0] = 1;
+ count[1] = 1;
+ start[0] = (hsize_t)mpi_rank * block[0];
+ start[1] = 0;
num_elements = block[0] * block[1];
/* allocate memory for data buffer */
- data_array = (DATATYPE *)HDmalloc(num_elements*sizeof(DATATYPE));
+ data_array = (DATATYPE *)HDmalloc(num_elements * sizeof(DATATYPE));
VRFY((data_array != NULL), "data_array HDmalloc succeeded");
/* create a memory dataspace independently */
- mem_dataspace = H5Screate_simple (1, &num_elements, NULL);
+ mem_dataspace = H5Screate_simple(1, &num_elements, NULL);
VRFY((mem_dataspace >= 0), "");
- for(k=0 ; k<NUM_DSETS; k++) {
+ for (k = 0; k < NUM_DSETS; k++) {
HDsprintf(dset_name, "dset%d", k);
dset_id = H5Dopen2(grp_id, dset_name, H5P_DEFAULT);
VRFY((dset_id >= 0), "");
@@ -664,8 +673,8 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
ndims = H5Sget_simple_extent_dims(sid, dims, NULL);
VRFY((ndims == 2), "H5Sget_simple_extent_dims succeeded");
- VRFY(dims[0] == (hsize_t)(ROW_FACTOR*mpi_size), "Wrong dataset dimensions");
- VRFY(dims[1] == (hsize_t)(COL_FACTOR*mpi_size), "Wrong dataset dimensions");
+ VRFY(dims[0] == (hsize_t)(ROW_FACTOR * mpi_size), "Wrong dataset dimensions");
+ VRFY(dims[1] == (hsize_t)(COL_FACTOR * mpi_size), "Wrong dataset dimensions");
ret = H5Sselect_hyperslab(sid, H5S_SELECT_SET, start, stride, count, block);
VRFY((ret >= 0), "H5Sset_hyperslab succeeded");
@@ -678,8 +687,8 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
ret = H5Sclose(sid);
VRFY((ret == 0), "");
- for (i=0; i < (int)num_elements; i++)
- VRFY((data_array[i] == mpi_rank+1), "Dataset Verify failed");
+ for (i = 0; i < (int)num_elements; i++)
+ VRFY((data_array[i] == mpi_rank + 1), "Dataset Verify failed");
}
grp_id2 = H5Gcreate2(file_id, "GROUP/GROUP2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
@@ -694,16 +703,16 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
/* flush invalidate each ring, starting from the outermost ring and
* working inward.
*/
- for ( i = 0; i < H5C__HASH_TABLE_LEN; i++ ) {
- H5C_cache_entry_t * entry_ptr = NULL;
+ for (i = 0; i < H5C__HASH_TABLE_LEN; i++) {
+ H5C_cache_entry_t *entry_ptr = NULL;
entry_ptr = cache_ptr->index[i];
- while ( entry_ptr != NULL ) {
+ while (entry_ptr != NULL) {
HDassert(entry_ptr->magic == H5C__H5C_CACHE_ENTRY_T_MAGIC);
HDassert(entry_ptr->is_dirty == FALSE);
- if(!entry_ptr->is_pinned && !entry_ptr->is_protected) {
+ if (!entry_ptr->is_pinned && !entry_ptr->is_protected) {
ret = H5AC_expunge_entry(f, entry_ptr->type, entry_ptr->addr, 0);
VRFY((ret == 0), "");
}
@@ -728,7 +737,11 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
VRFY((ret == 0), "");
/* Pop API context */
- if(api_ctx_pushed) { ret = H5CX_pop(); VRFY((ret == 0), "H5CX_pop()"); api_ctx_pushed = FALSE; }
+ if (api_ctx_pushed) {
+ ret = H5CX_pop();
+ VRFY((ret == 0), "H5CX_pop()");
+ api_ctx_pushed = FALSE;
+ }
HDfree(data_array);
@@ -743,19 +756,19 @@ open_file(const char *filename, hid_t fapl, int metadata_write_strategy,
void
test_file_properties(void)
{
- hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */
- hid_t fapl_id = H5I_INVALID_HID; /* File access plist */
- hid_t fapl_copy_id = H5I_INVALID_HID; /* File access plist */
- hbool_t is_coll;
- htri_t are_equal;
+ hid_t fid = H5I_INVALID_HID; /* HDF5 file ID */
+ hid_t fapl_id = H5I_INVALID_HID; /* File access plist */
+ hid_t fapl_copy_id = H5I_INVALID_HID; /* File access plist */
+ hbool_t is_coll;
+ htri_t are_equal;
const char *filename;
- MPI_Comm comm = MPI_COMM_WORLD;
- MPI_Info info = MPI_INFO_NULL;
- MPI_Comm comm_out = MPI_COMM_NULL;
- MPI_Info info_out = MPI_INFO_NULL;
- herr_t ret; /* Generic return value */
- int mpi_ret; /* MPI return value */
- int cmp; /* Compare value */
+ MPI_Comm comm = MPI_COMM_WORLD;
+ MPI_Info info = MPI_INFO_NULL;
+ MPI_Comm comm_out = MPI_COMM_NULL;
+ MPI_Info info_out = MPI_INFO_NULL;
+ herr_t ret; /* Generic return value */
+ int mpi_ret; /* MPI return value */
+ int cmp; /* Compare value */
filename = (const char *)GetTestParameters();
@@ -785,7 +798,7 @@ test_file_properties(void)
/* Check the communicator */
VRFY((comm != comm_out), "Communicators should not be bitwise identical");
- cmp = MPI_UNEQUAL;
+ cmp = MPI_UNEQUAL;
mpi_ret = MPI_Comm_compare(comm, comm_out, &cmp);
VRFY((ret >= 0), "MPI_Comm_compare succeeded");
VRFY((cmp == MPI_CONGRUENT), "Communicators should be congruent via MPI_Comm_compare");
@@ -932,4 +945,3 @@ test_file_properties(void)
VRFY((mpi_ret >= 0), "MPI_Info_free succeeded");
} /* end test_file_properties() */
-
generated by cgit v0.12 at 2024-10-30 21:01:06 (GMT)