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-rw-r--r--testpar/t_mdset.c289
-rw-r--r--testpar/testphdf5.c14
-rw-r--r--testpar/testphdf5.h1
3 files changed, 302 insertions, 2 deletions
diff --git a/testpar/t_mdset.c b/testpar/t_mdset.c
index d6d9907..6d8bd60 100644
--- a/testpar/t_mdset.c
+++ b/testpar/t_mdset.c
@@ -1394,6 +1394,295 @@ void get_slab(hssize_t chunk_origin[],
count[0] = count[1] = 1;
}
+/*
+ * This function is based on bug demonstration code provided by Thomas
+ * Guignon (thomas.guignon@ifp.fr), and is intended to verify the
+ * correctness of my fix for that bug.
+ *
+ * In essence, the bug appeared when at least one process attempted to
+ * write a point selection -- for which collective I/O is not supported,
+ * and at least one other attempted to write some other type of selection
+ * for which collective I/O is supported.
+ *
+ * Since the processes did not compare notes before performing the I/O,
+ * some would attempt collective I/O while others performed independent
+ * I/O. A hang resulted.
+ *
+ * This function reproduces this situation. At present the test hangs
+ * on failure.
+ * JRM - 9/13/04
+ *
+ * Changes: None.
+ */
+
+#define N 4
+
+void io_mode_confusion(void)
+{
+ /*
+ * HDF5 APIs definitions
+ */
+
+ const int rank = 1;
+ const char *dataset_name = "IntArray";
+
+ hid_t file_id, dset_id; /* file and dataset identifiers */
+ hid_t filespace, memspace; /* file and memory dataspace */
+ /* identifiers */
+ hsize_t dimsf[1]; /* dataset dimensions */
+ int data[N] = {1}; /* pointer to data buffer to write */
+ hssize_t select[N] = {0L,1L,2L,3L};
+ hssize_t start[1];
+ hsize_t stride[1];
+ hsize_t count[1];
+ hsize_t block[1];
+ hid_t plist_id; /* property list identifier */
+ int i;
+ herr_t status;
+
+
+ /*
+ * MPI variables
+ */
+
+ int mpi_size, mpi_rank;
+
+
+ /*
+ * test bed related variables
+ */
+
+ char * fcn_name = "io_mode_confusion";
+ const hbool_t verbose = FALSE;
+ H5Ptest_param_t * pt;
+ char * filename;
+
+
+ pt = (H5Ptest_param_t *) GetTestParameters();
+ filename = pt->name;
+
+ MPI_Comm_rank(MPI_COMM_WORLD, &mpi_rank);
+ MPI_Comm_size(MPI_COMM_WORLD, &mpi_size);
+
+ /*
+ * Set up file access property list with parallel I/O access
+ */
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Setting up property list.\n",
+ mpi_rank, fcn_name);
+
+ plist_id = H5Pcreate(H5P_FILE_ACCESS);
+
+ VRFY((plist_id != -1), "H5Pcreate() failed");
+
+ status = H5Pset_fapl_mpio(plist_id, MPI_COMM_WORLD, MPI_INFO_NULL);
+
+ VRFY(( status >= 0 ), "H5Pset_fapl_mpio() failed");
+
+
+ /*
+ * Create a new file collectively and release property list identifier.
+ */
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Creating new file.\n", mpi_rank, fcn_name);
+
+ file_id = H5Fcreate(filename, H5F_ACC_TRUNC, H5P_DEFAULT, plist_id);
+
+ VRFY(( file_id >= 0 ), "H5Fcreate() failed");
+
+ status = H5Pclose(plist_id);
+
+ VRFY(( status >= 0 ), "H5Pclose() failed");
+
+
+ /*
+ * Create the dataspace for the dataset.
+ */
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Creating the dataspace for the dataset.\n",
+ mpi_rank, fcn_name);
+
+ dimsf[0] = N;
+
+ filespace = H5Screate_simple(rank, dimsf, NULL);
+
+ VRFY(( filespace >= 0 ), "H5Screate_simple() failed.");
+
+
+ /*
+ * Create the dataset with default properties and close filespace.
+ */
+
+ if ( verbose )
+ HDfprintf(stdout,
+ "%0d:%s: Creating the dataset, and closing filespace.\n",
+ mpi_rank, fcn_name);
+
+ dset_id = H5Dcreate(file_id, dataset_name, H5T_NATIVE_INT, filespace,
+ H5P_DEFAULT);
+
+ VRFY(( dset_id >= 0 ), "H5Dcreate() failed");
+
+ status = H5Sclose(filespace);
+
+ VRFY(( status >= 0 ), "H5Sclose() failed");
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Screate_simple().\n",
+ mpi_rank, fcn_name);
+
+ memspace = H5Screate_simple(rank, dimsf, NULL);
+
+ VRFY(( memspace >= 0 ), "H5Screate_simple() failed.");
+
+
+ if( mpi_rank == 0 ) {
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Sselect_all(memspace).\n",
+ mpi_rank, fcn_name);
+
+ status = H5Sselect_all(memspace);
+
+ VRFY(( status >= 0 ), "H5Sselect_all() failed");
+
+ } else {
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Sselect_none(memspace).\n",
+ mpi_rank, fcn_name);
+
+ status = H5Sselect_none(memspace);
+
+ VRFY(( status >= 0 ), "H5Sselect_none() failed");
+
+ }
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling MPI_Barrier().\n",
+ mpi_rank, fcn_name);
+
+ MPI_Barrier(MPI_COMM_WORLD);
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Dget_space().\n",
+ mpi_rank, fcn_name);
+
+ filespace = H5Dget_space(dset_id);
+
+ VRFY(( filespace >= 0 ), "H5Dget_space() failed");
+
+
+ start[0] = 0L;
+ stride[0] = 1;
+ count[0] = 1;
+ block[0] = N;
+
+ if ( mpi_rank == 0 ) {
+
+ /* select all */
+
+ if ( verbose )
+ HDfprintf(stdout,
+ "%0d:%s: Calling H5Sselect_elements() -- set up hang?\n",
+ mpi_rank, fcn_name);
+
+ status = H5Sselect_elements(filespace, H5S_SELECT_SET, N,
+ (const hssize_t **)&select);
+
+ VRFY(( status >= 0 ), "H5Sselect_elements() failed");
+
+ } else {
+
+ /* select nothing */
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Sselect_none().\n",
+ mpi_rank, fcn_name);
+
+ status = H5Sselect_none(filespace);
+
+ VRFY(( status >= 0 ), "H5Sselect_none() failed");
+
+ }
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling MPI_Barrier().\n",
+ mpi_rank, fcn_name);
+
+ MPI_Barrier(MPI_COMM_WORLD);
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Pcreate().\n", mpi_rank, fcn_name);
+
+ plist_id = H5Pcreate(H5P_DATASET_XFER);
+
+ VRFY(( plist_id != -1 ), "H5Pcreate() failed");
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Pset_dxpl_mpio().\n",
+ mpi_rank, fcn_name);
+
+ status = H5Pset_dxpl_mpio(plist_id, H5FD_MPIO_COLLECTIVE);
+
+ VRFY(( status >= 0 ), "H5Pset_dxpl_mpio() failed");
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Calling H5Dwrite() -- hang here?.\n",
+ mpi_rank, fcn_name);
+
+ status = H5Dwrite(dset_id, H5T_NATIVE_INT, memspace, filespace,
+ plist_id, data);
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Returned from H5Dwrite(), status=%d.\n",
+ mpi_rank, fcn_name, status);
+
+ VRFY(( status >= 0 ), "H5Dwrite() failed");
+
+ /*
+ * Close/release resources.
+ */
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Cleaning up from test.\n",
+ mpi_rank, fcn_name);
+
+ status = H5Dclose(dset_id);
+ VRFY(( status >= 0 ), "H5Dclose() failed");
+
+ status = H5Sclose(filespace);
+ VRFY(( status >= 0 ), "H5Dclose() failed");
+
+ status = H5Sclose(memspace);
+ VRFY(( status >= 0 ), "H5Sclose() failed");
+
+ status = H5Pclose(plist_id);
+ VRFY(( status >= 0 ), "H5Pclose() failed");
+
+ status = H5Fclose(file_id);
+ VRFY(( status >= 0 ), "H5Fclose() failed");
+
+
+ if ( verbose )
+ HDfprintf(stdout, "%0d:%s: Done.\n", mpi_rank);
+
+ return;
+
+} /* io_mode_confusion() */
+
+#undef N
+
/*=============================================================================
* End of t_mdset.c
*===========================================================================*/
diff --git a/testpar/testphdf5.c b/testpar/testphdf5.c
index 793a9b8..815c21c 100644
--- a/testpar/testphdf5.c
+++ b/testpar/testphdf5.c
@@ -39,7 +39,7 @@ void *old_client_data; /* previous error handler arg.*/
/* other option flags */
/* FILENAME and filenames must have the same number of names */
-const char *FILENAME[12]={
+const char *FILENAME[13]={
"ParaEg1",
"ParaEg2",
"ParaEg3",
@@ -51,8 +51,9 @@ const char *FILENAME[12]={
"ParaFill",
"ParaCC",
"ParaNull",
+ "ModeConfusion",
NULL};
-char filenames[12][PATH_MAX];
+char filenames[13][PATH_MAX];
hid_t fapl; /* file access property list */
#ifdef USE_PAUSE
@@ -335,6 +336,7 @@ int main(int argc, char **argv)
int mpi_size, mpi_rank; /* mpi variables */
H5Ptest_param_t ndsets_params, ngroups_params;
H5Ptest_param_t collngroups_params;
+ H5Ptest_param_t io_mode_confusion_params;
/* Un-buffer the stdout and stderr */
setbuf(stderr, NULL);
@@ -433,6 +435,14 @@ int main(int argc, char **argv)
AddTest("null", null_dataset, NULL,
"null dataset test", filenames[10]);
+ io_mode_confusion_params.name = filenames[11];
+ io_mode_confusion_params.count = 0; /* value not used */
+
+ AddTest("I/Omodeconf", io_mode_confusion, NULL,
+ "I/O mode confusion test -- hangs quickly on failure",
+ &io_mode_confusion_params);
+
+
/* Display testing information */
TestInfo(argv[0]);
diff --git a/testpar/testphdf5.h b/testpar/testphdf5.h
index deb236b..2ab5047 100644
--- a/testpar/testphdf5.h
+++ b/testpar/testphdf5.h
@@ -172,6 +172,7 @@ void coll_chunk1(void);
void coll_chunk2(void);
void coll_chunk3(void);
void coll_chunk4(void);
+void io_mode_confusion(void);
/* commonly used prototypes */
hid_t create_faccess_plist(MPI_Comm comm, MPI_Info info, int l_facc_type, hbool_t use_gpfs);
generated by cgit v0.12 at 2024-12-28 09:23:16 (GMT)