diff options
Diffstat (limited to 'tools/h5copy/h5copygentest.c')
| -rw-r--r-- | tools/h5copy/h5copygentest.c | 537 |
1 files changed, 517 insertions, 20 deletions
diff --git a/tools/h5copy/h5copygentest.c b/tools/h5copy/h5copygentest.c index cd4c234..e52b700 100644 --- a/tools/h5copy/h5copygentest.c +++ b/tools/h5copy/h5copygentest.c @@ -18,9 +18,17 @@ */ #include <stdlib.h> #include "hdf5.h" +#include "H5private.h" +#include "h5tools.h" -#define FILENAME "h5copytst.h5" -#define FILENAME_NEW "h5copytst_new.h5" +/* HDF file names */ +#define HDF_FILE1 "h5copytst.h5" +#define HDF_FILE1_NEW "h5copytst_new.h5" +#define HDF_FILE2 "h5copy_ref.h5" +#define HDF_EXT_SRC_FILE "h5copy_extlinks_src.h5" +#define HDF_EXT_TRG_FILE "h5copy_extlinks_trg.h5" + +/* objects in HDF_FILE1 */ #define DATASET_SIMPLE "simple" #define DATASET_CHUNK "chunk" #define DATASET_COMPACT "compact" @@ -34,6 +42,13 @@ #define TRUE 1 #define FALSE 0 +/* Obj reference */ +#define OBJ_REF_DS "Dset1" +#define OBJ_REF_GRP "Group" +/* Region reference */ +#define REG_REF_DS1 "Dset_REGREF" +#define REG_REF_DS2 "Dset2" + /*------------------------------------------------------------------------- * Function: gent_simple @@ -213,7 +228,8 @@ static void gent_compressed(hid_t loc_id) /*------------------------------------------------------------------------- * Function: gent_named_vl * - * Purpose: Generate a variable lenght named datatype for a dataset in LOC_ID + * Purpose: Generate a variable lenght named datatype for a dataset in + LOC_ID * *------------------------------------------------------------------------- */ @@ -389,37 +405,518 @@ static void gent_nested_group(hid_t loc_id) H5Gclose(gid); } + /*------------------------------------------------------------------------- - * Function: main + * Function: gen_obj_ref * - *------------------------------------------------------------------------- - */ + * Purpose: Generate object references to dataset and group + * + * Programmer: Jonathan Kim (Feb 23, 2010) + *------------------------------------------------------------------------*/ +static herr_t gen_obj_ref(hid_t loc_id) +{ + hid_t sid=0, oid=0; + hsize_t dims1[1]={3}; + hsize_t dims2[1]={2}; + int data[3] = {10,20,30}; + int status; + herr_t ret = SUCCEED; + + /*-------------- + * add dataset */ + sid = H5Screate_simple(1, dims1, NULL); + if (sid < 0) + { + fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } -int main(void) + oid = H5Dcreate2 (loc_id, OBJ_REF_DS, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if (oid < 0) + { + fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + status = H5Dwrite(oid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + H5Dclose(oid); + H5Sclose(sid); + + /*-------------- + * add group */ + oid = H5Gcreate2 (loc_id, OBJ_REF_GRP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if (oid < 0) + { + fprintf(stderr, "Error: %s %d> H5Gcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + H5Gclose(oid); + + /*--------------------- + * create obj references to the previously created objects. + * Passing -1 as reference is an object.*/ + hobj_ref_t or_data[2]; /* write buffer */ + + status = H5Rcreate (&or_data[0], loc_id, OBJ_REF_DS, H5R_OBJECT, -1); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + status = H5Rcreate (&or_data[1], loc_id, OBJ_REF_GRP, H5R_OBJECT, -1); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + sid = H5Screate_simple (1, dims2, NULL); + if (sid < 0) + { + fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + oid = H5Dcreate2 (loc_id, "Dset_OBJREF", H5T_STD_REF_OBJ, sid, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT); + if (oid < 0) + { + fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + status = H5Dwrite(oid, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, or_data); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + +out: + if(oid > 0) + H5Dclose(oid); + if(sid > 0) + H5Sclose(sid); + + return ret; +} + + +/*------------------------------------------------------------------------- + * Function: gen_region_ref + * + * Purpose: Generate dataset region references + * + * Programmer: Jonathan Kim (Feb 23, 2010) + *------------------------------------------------------------------------*/ +static herr_t gen_region_ref(hid_t loc_id) +{ + hid_t sid=0, oid1=0, oid2=0; + int status; + herr_t ret = SUCCEED; + char data[3][16] = {"The quick brown", "fox jumps over ", "the 5 lazy dogs"}; + hsize_t dims2[2] = {3,16}; + hsize_t coords[4][2] = { {0,1}, {2,11}, {1,0}, {2,4} }; + hdset_reg_ref_t rr_data[2]; + hsize_t start[2] = {0,0}; + hsize_t stride[2] = {2,11}; + hsize_t count[2] = {2,2}; + hsize_t block[2] = {1,3}; + hsize_t dims1[1] = {2}; + + sid = H5Screate_simple (2, dims2, NULL); + if (sid < 0) + { + fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* create normal dataset which is refered */ + oid2 = H5Dcreate2 (loc_id, REG_REF_DS2, H5T_STD_I8LE, sid, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT); + if (oid2 < 0) + { + fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* write values to dataset */ + status = H5Dwrite (oid2, H5T_NATIVE_CHAR, H5S_ALL, H5S_ALL, H5P_DEFAULT, data); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* select elements space for reference */ + status = H5Sselect_elements (sid, H5S_SELECT_SET, 4, coords[0]); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Sselect_elements failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* create region reference from elements space */ + status = H5Rcreate (&rr_data[0], loc_id, REG_REF_DS2, H5R_DATASET_REGION, sid); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* select hyperslab space for reference */ + status = H5Sselect_hyperslab (sid, H5S_SELECT_SET, start, stride, count, block); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Sselect_hyperslab failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* create region reference from hyperslab space */ + status = H5Rcreate (&rr_data[1], loc_id, REG_REF_DS2, H5R_DATASET_REGION, sid); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + H5Sclose (sid); + + /* Create dataspace. */ + sid = H5Screate_simple (1, dims1, NULL); + if (sid < 0) + { + fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* create region reference dataset */ + oid1 = H5Dcreate2 (loc_id, REG_REF_DS1, H5T_STD_REF_DSETREG, sid, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT); + if (oid1 < 0) + { + fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* write data as region references */ + status = H5Dwrite (oid1, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rr_data); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + +out: + if (oid1 > 0) + H5Dclose (oid1); + if (oid2 > 0) + H5Dclose (oid2); + if (sid > 0) + H5Sclose (sid); + + return ret; +} + +/*------------------------------------------------------------------------- + * Function: Test_Obj_Copy + * + * Purpose: Testing with various objects + * + *------------------------------------------------------------------------*/ +static void Test_Obj_Copy() { - hid_t fid; /* File id */ - hid_t fapl_new; /* File access property id */ - hbool_t new_format; /* New format or old format */ + hid_t fid = (-1); /* File id */ + hid_t fapl_new = (-1); /* File access property id */ + hbool_t new_format; /* New format or old format */ - fapl_new = H5Pcreate(H5P_FILE_ACCESS); - H5Pset_libver_bounds(fapl_new, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST); + if((fapl_new = H5Pcreate(H5P_FILE_ACCESS)) < 0) { + fprintf(stderr, "Error: H5Pcreate failed.\n"); + goto out; + } + if(H5Pset_libver_bounds(fapl_new, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) { + fprintf(stderr, "Error: H5Pset_libver_bounds failed.\n"); + goto out; + } /* Test with old & new format groups */ for(new_format = FALSE; new_format <= TRUE; new_format++) { /* Set the FAPL for the type of format */ + /* Create source file */ if(new_format) - fid = H5Fcreate(FILENAME_NEW, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_new); + fid = H5Fcreate(HDF_FILE1, H5F_ACC_TRUNC, H5P_DEFAULT, fapl_new); else - fid = H5Fcreate(FILENAME, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + fid = H5Fcreate(HDF_FILE1_NEW, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if(fid < 0) { + fprintf(stderr, "Error: H5Fcreate failed.\n"); + goto out; + } + + gent_datasets(fid); + gent_empty_group(fid); + gent_nested_datasets(fid); + gent_nested_group(fid); + + H5Fclose(fid); + fid = (-1); + } /* end for */ + +out: + /*----------------------------------------------------------------------- + * Close + *------------------------------------------------------------------------*/ + if(fid > 0) + H5Fclose(fid); + if(fapl_new > 0) + H5Pclose(fapl_new); +} - gent_datasets(fid); - gent_empty_group(fid); - gent_nested_datasets(fid); - gent_nested_group(fid); - H5Fclose(fid); +/*------------------------------------------------------------------------- + * Function: Test_Ref_Copy + * + * Purpose: Testing with various references + * + *------------------------------------------------------------------------*/ +static void Test_Ref_Copy() +{ + hid_t fid=0; + herr_t status; + + fid = H5Fcreate (HDF_FILE2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if (fid < 0) + { + fprintf(stderr, "Error: %s> H5Fcreate failed.\n", HDF_FILE2); + goto out; } - H5Pclose(fapl_new); + + /* add object reference */ + status = gen_obj_ref(fid); + if (status < 0) + fprintf(stderr, "Failed to generate object reference.\n"); + + /* add region reference */ + status = gen_region_ref(fid); + if (status < 0) + fprintf(stderr, "Failed to generate region reference.\n"); + +out: + /*----------------------------------------------------------------------- + * Close + *------------------------------------------------------------------------*/ + if(fid > 0) + H5Fclose(fid); +} + +/*------------------------------------------------------------------------- + * Function: gen_extlink_trg + * + * Purpose: generate target external link objs + * + * Programmer: Jonathan Kim (March 03, 2010) + *------------------------------------------------------------------------*/ +static herr_t gen_extlink_trg(hid_t loc_id) +{ + hid_t gid=0, tid=0; + int status; + herr_t ret = SUCCEED; + + /*----------------------------------------------------------------------- + * Groups + *------------------------------------------------------------------------*/ + /*-------------- + * target file */ + gid = H5Gcreate2(loc_id, "group", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if (gid < 0) + { + fprintf(stderr, "Error: %s %d> H5Gcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /*-------------- + * add dataset */ + gent_simple(loc_id); + + /*-------------------- + * add named datatype + */ + tid = H5Tcopy(H5T_NATIVE_INT); + status = H5Tcommit2(loc_id, "datatype", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Tcommit2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + +out: + if(gid > 0) + H5Gclose(gid); + if(tid > 0) + H5Tclose(tid); + + return ret; +} + +/*------------------------------------------------------------------------- + * Function: gen_extlink_src + * + * Purpose: generate source external link objs + * + * Programmer: Jonathan Kim (March 03, 2010) + *------------------------------------------------------------------------*/ +static herr_t gen_extlink_src(hid_t loc_id) +{ + hid_t gid=0; + int status; + herr_t ret = SUCCEED; + + /*----------------------------------------------------------------------- + * Groups + *------------------------------------------------------------------------*/ + gid = H5Gcreate2(loc_id, "/group_ext", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); + if (gid < 0) + { + fprintf(stderr, "Error: %s %d> H5Gcreate2 failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /*----------------------------------------------------------------------- + * External links + *------------------------------------------------------------------------*/ + /* link to dataset */ + status = H5Lcreate_external(HDF_EXT_TRG_FILE, "/simple", gid, "extlink_dset", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Lcreate_external failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* link to group */ + status = H5Lcreate_external(HDF_EXT_TRG_FILE, "/group", gid, "extlink_grp", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Lcreate_external failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* link to datatype */ + status = H5Lcreate_external(HDF_EXT_TRG_FILE, "/datatype", gid, "extlink_datatype", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Lcreate_external failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* dangling link - no obj*/ + status = H5Lcreate_external(HDF_EXT_TRG_FILE, "notyet", gid, "extlink_notyet1", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Lcreate_external failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + + /* dangling link - no file */ + status = H5Lcreate_external("notyet_file.h5", "notyet", gid, "extlink_notyet2", H5P_DEFAULT, H5P_DEFAULT); + if (status < 0) + { + fprintf(stderr, "Error: %s %d> H5Lcreate_external failed.\n", __FUNCTION__, __LINE__); + ret = FAIL; + goto out; + } + +out: + if(gid > 0) + H5Gclose(gid); + + return ret; +} + +/*------------------------------------------------------------------------- + * Function: Test_Extlink_Copy + * + * Purpose: gerenate external link files + * + *------------------------------------------------------------------------*/ +static void Test_Extlink_Copy() +{ + hid_t fid1=0; + hid_t fid2=0; + herr_t status; + + fid1 = H5Fcreate (HDF_EXT_SRC_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if (fid1 < 0) + { + fprintf(stderr, "Error: %s> H5Fcreate failed.\n", HDF_EXT_SRC_FILE); + goto out; + } + + fid2 = H5Fcreate (HDF_EXT_TRG_FILE, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); + if (fid2 < 0) + { + fprintf(stderr, "Error: %s> H5Fcreate failed.\n", HDF_EXT_TRG_FILE); + goto out; + } + + /* add links to source external link file */ + status = gen_extlink_src(fid1); + if (status < 0) + fprintf(stderr, "Error: %s> gen_extlink_src failed.\n", HDF_EXT_SRC_FILE); + + /* add objs to target external link file */ + status = gen_extlink_trg(fid2); + if (status < 0) + fprintf(stderr, "Error: %s> gen_extlink_trg failed.\n", HDF_EXT_TRG_FILE); + +out: + /*----------------------------------------------------------------------- + * Close + *------------------------------------------------------------------------*/ + if(fid1 > 0) + H5Fclose(fid1); + if(fid2 > 0) + H5Fclose(fid2); +} + +/*------------------------------------------------------------------------- + * Function: main + * + *------------------------------------------------------------------------- + */ + +int main(void) +{ + Test_Obj_Copy(); + Test_Ref_Copy(); + Test_Extlink_Copy(); return 0; } |