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-rw-r--r--tools/h5dumptst.c378
1 files changed, 217 insertions, 161 deletions
diff --git a/tools/h5dumptst.c b/tools/h5dumptst.c
index feb9d1a..75a6229 100644
--- a/tools/h5dumptst.c
+++ b/tools/h5dumptst.c
@@ -321,43 +321,44 @@ int i, dset[5];
*/
static void test_compound_dt(void) { /* test compound data type */
-hid_t fid, group, dataset, space, space3, type, type2;
-typedef struct {
- int a;
- float b;
- double c;
-} dset1_t;
-dset1_t dset1[5];
-
-typedef struct {
- int a;
- float b;
-} dset2_t;
-dset2_t dset2[5];
-
-typedef struct {
- int a[4];
- float b[5][6];
-} dset3_t;
-dset3_t dset3[3][6];
-
-typedef struct {
- int a;
- float b;
-} dset4_t;
-dset4_t dset4[5];
-
-typedef struct {
- int a;
- float b;
-} dset5_t;
-dset5_t dset5[5];
-
-int i, j, k, l, ndims;
-size_t dim[2];
-
-hsize_t sdim = 5;
-hsize_t dset3_dim[2];
+ hid_t fid, group, dataset, space, space3, type, type2;
+ hid_t array_dt;
+ typedef struct {
+ int a;
+ float b;
+ double c;
+ } dset1_t;
+ dset1_t dset1[5];
+
+ typedef struct {
+ int a;
+ float b;
+ } dset2_t;
+ dset2_t dset2[5];
+
+ typedef struct {
+ int a[4];
+ float b[5][6];
+ } dset3_t;
+ dset3_t dset3[3][6];
+
+ typedef struct {
+ int a;
+ float b;
+ } dset4_t;
+ dset4_t dset4[5];
+
+ typedef struct {
+ int a;
+ float b;
+ } dset5_t;
+ dset5_t dset5[5];
+
+ int i, j, k, l, ndims;
+ hsize_t dim[2];
+
+ hsize_t sdim = 5;
+ hsize_t dset3_dim[2];
for (i = 0; i < (int)sdim; i++) {
@@ -414,13 +415,27 @@ hsize_t dset3_dim[2];
/* shared data type 2 */
type = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
+
ndims = 1; dim[0] = 4;
- H5Tinsert_array(type, "int_array", HOFFSET(dset3_t, a), ndims, dim, NULL, H5T_STD_I32BE);
- H5Tinsert_array(type2, "int_array", HOFFSET(dset3_t, a), ndims, dim, NULL, H5T_NATIVE_INT);
+
+ array_dt=H5Tarray_create(H5T_STD_I32BE,ndims,dim,NULL);
+ H5Tinsert(type, "int_array", HOFFSET(dset3_t, a), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_INT,ndims,dim,NULL);
+ H5Tinsert(type2, "int_array", HOFFSET(dset3_t, a), array_dt);
+ H5Tclose(array_dt);
+
ndims = 2; dim[0] = 5; dim[1] = 6;
- H5Tinsert_array(type, "float_array", HOFFSET(dset3_t, b), ndims, dim, NULL, H5T_IEEE_F32BE);
- H5Tinsert_array(type2, "float_array", HOFFSET(dset3_t, b), ndims, dim, NULL, H5T_NATIVE_FLOAT);
+ array_dt=H5Tarray_create(H5T_IEEE_F32BE,ndims,dim,NULL);
+ H5Tinsert(type, "float_array", HOFFSET(dset3_t, b), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_FLOAT,ndims,dim,NULL);
+ H5Tinsert(type2, "float_array", HOFFSET(dset3_t, b), array_dt);
+ H5Tclose(array_dt);
+
H5Tcommit(fid, "type2", type);
@@ -493,42 +508,44 @@ hsize_t dset3_dim[2];
*/
static void test_compound_dt2(void) { /* test compound data type */
-hid_t fid, group, dataset, space, type, create_plist, type2;
-typedef struct {
- int a;
- float b;
- double c;
-} dset1_t;
-dset1_t dset1[10];
-
-typedef struct {
- int a;
- float b;
-} dset2_t;
-dset2_t dset2[10];
-
-typedef struct {
- int a[4];
- float b[5][6];
-} dset3_t;
-
-typedef struct {
- int a;
- float b;
-} dset4_t;
-dset4_t dset4[10];
-
-typedef struct {
- int a;
- float b;
-} dset5_t;
-dset5_t dset5[10];
-
-int i, ndims;
-const int perm[2]={0,1};
-size_t dim[2];
-
-hsize_t sdim, maxdim;
+ hid_t fid, group, dataset, space, type, create_plist, type2;
+ hid_t array_dt;
+
+ typedef struct {
+ int a;
+ float b;
+ double c;
+ } dset1_t;
+ dset1_t dset1[10];
+
+ typedef struct {
+ int a;
+ float b;
+ } dset2_t;
+ dset2_t dset2[10];
+
+ typedef struct {
+ int a[4];
+ float b[5][6];
+ } dset3_t;
+
+ typedef struct {
+ int a;
+ float b;
+ } dset4_t;
+ dset4_t dset4[10];
+
+ typedef struct {
+ int a;
+ float b;
+ } dset5_t;
+ dset5_t dset5[10];
+
+ int i, ndims;
+ const int perm[2]={0,1};
+ hsize_t dim[2];
+
+ hsize_t sdim, maxdim;
sdim = 10;
for (i = 0; i < (int)sdim; i++) {
@@ -606,10 +623,17 @@ hsize_t sdim, maxdim;
/* shared data type 2 */
type = H5Tcreate (H5T_COMPOUND, sizeof(dset3_t));
+
ndims = 1; dim[0] = 4;
- H5Tinsert_array(type, "int_array", HOFFSET(dset3_t, a), ndims, dim, perm, H5T_STD_I32BE);
+ array_dt=H5Tarray_create(H5T_STD_I32BE,ndims,dim,perm);
+ H5Tinsert(type, "int_array", HOFFSET(dset3_t, a), array_dt);
+ H5Tclose(array_dt);
+
ndims = 2; dim[0] = 5; dim[1] = 6;
- H5Tinsert_array(type, "float_array", HOFFSET(dset3_t, b), ndims, dim, perm, H5T_IEEE_F32BE);
+ array_dt=H5Tarray_create(H5T_IEEE_F32BE,ndims,dim,perm);
+ H5Tinsert(type, "float_array", HOFFSET(dset3_t, b), array_dt);
+ H5Tclose(array_dt);
+
H5Tcommit(fid, "type2", type);
H5Tclose(type);
@@ -855,26 +879,27 @@ hid_t fid, group;
*/
static void test_many(void) {
-hid_t fid, group, attr, dataset, space, space2, type, create_plist, type2;
-hsize_t dims[2];
-int data[2][2], dset2[10][10], dset3[10][10];
-double d[10];
-
-char buf[60];
-int i, j;
-int i0, i1, i2, i3;
-hsize_t sdim, maxdim;
-
-typedef struct { /* compound type has members with rank > 1 */
- int a[2][2][2][2]; /* arrays are 2x2x2x2 */
- double b[2][2][2][2];
- double c[2][2][2][2];
-} dset1_t;
-dset1_t dset1[6];
-
-size_t dim[4];
-int index[4] = {0,1,2,3}; /* normal indicies */
-const int perm[4] = {0,1,2,3}; /* the 0'th and the 3'rd indices are permuted */
+ hid_t fid, group, attr, dataset, space, space2, type, create_plist, type2;
+ hid_t array_dt;
+ hsize_t dims[2];
+ int data[2][2], dset2[10][10], dset3[10][10];
+ double d[10];
+
+ char buf[60];
+ int i, j;
+ int i0, i1, i2, i3;
+ hsize_t sdim, maxdim;
+
+ typedef struct { /* compound type has members with rank > 1 */
+ int a[2][2][2][2]; /* arrays are 2x2x2x2 */
+ double b[2][2][2][2];
+ double c[2][2][2][2];
+ } dset1_t;
+ dset1_t dset1[6];
+
+ hsize_t dim[4];
+ int index[4] = {0,1,2,3}; /* normal indicies */
+ const int perm[4] = {0,1,2,3}; /* the 0'th and the 3'rd indices are permuted */
fid = H5Fcreate(FILE12, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -891,15 +916,32 @@ const int perm[4] = {0,1,2,3}; /* the 0'th and the 3'rd indices are permuted */
type = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
dim[0] = dim[1] = dim[2] = dim[3] = 2;
- H5Tinsert_array(type, "a_array", HOFFSET(dset1_t, a), 4, dim, perm, H5T_STD_I32BE);
- H5Tinsert_array(type, "b_array", HOFFSET(dset1_t, b), 4, dim, perm, H5T_IEEE_F64BE);
- H5Tinsert_array(type, "c_array", HOFFSET(dset1_t, c), 4, dim, perm, H5T_IEEE_F64BE);
+ array_dt=H5Tarray_create(H5T_STD_I32BE,4,dim,perm);
+ H5Tinsert(type, "a_array", HOFFSET(dset1_t, a), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_IEEE_F64BE,4,dim,perm);
+ H5Tinsert(type, "b_array", HOFFSET(dset1_t, b), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_IEEE_F64BE,4,dim,perm);
+ H5Tinsert(type, "c_array", HOFFSET(dset1_t, c), array_dt);
+ H5Tclose(array_dt);
type2 = H5Tcreate (H5T_COMPOUND, sizeof(dset1[0]));
- H5Tinsert_array(type2, "a_array", HOFFSET(dset1_t, a), 4, dim, perm, H5T_NATIVE_INT);
- H5Tinsert_array(type2, "b_array", HOFFSET(dset1_t, b), 4, dim, perm, H5T_NATIVE_DOUBLE);
- H5Tinsert_array(type2, "c_array", HOFFSET(dset1_t, c), 4, dim, perm, H5T_NATIVE_DOUBLE);
+ array_dt=H5Tarray_create(H5T_NATIVE_INT,4,dim,perm);
+ H5Tinsert(type2, "a_array", HOFFSET(dset1_t, a), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_DOUBLE,4,dim,perm);
+ H5Tinsert(type2, "b_array", HOFFSET(dset1_t, b), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_DOUBLE,4,dim,perm);
+ H5Tinsert(type2, "c_array", HOFFSET(dset1_t, c), array_dt);
+ H5Tclose(array_dt);
+
/* dset1 */
sdim = 6;
@@ -1033,41 +1075,42 @@ hid_t type;
}
static void test_str(void) {
-hid_t fid, dataset, space, f_type, m_type, str_type, f_type2;
-
-hsize_t dims1[] = { 3, 4};
-char string1[12][2] = {"s1","s2","s3","s4","s5","s6","s7","s8","s9",
- "s0","s1","s2"};
-
-hsize_t dims2[]={20};
-char string2[20][9] = {"ab cd ef1", "ab cd ef2", "ab cd ef3", "ab cd ef4",
- "ab cd ef5", "ab cd ef6", "ab cd ef7", "ab cd ef8",
- "ab cd ef9", "ab cd ef0", "ab cd ef1", "ab cd ef2",
- "ab cd ef3", "ab cd ef4", "ab cd ef5", "ab cd ef6",
- "ab cd ef7", "ab cd ef8", "ab cd ef9", "ab cd ef0"};
-
-hsize_t dims3[] = { 27};
-char string3[27][5] = {"abcd0", "abcd1", "abcd2", "abcd3",
- "abcd4", "abcd5", "abcd6", "abcd7",
- "abcd8", "abcd9", "abcd0", "abcd1",
- "abcd2", "abcd3", "abcd4", "abcd5",
- "abcd6", "abcd7", "abcd8", "abcd9",
- "abcd0", "abcd1", "abcd2", "abcd3",
- "abcd4", "abcd5", "abcd6"};
-
-int i, j, k, l;
-
-hsize_t dims4[] = { 3 };
-char string4[3][20] = { "s1234567890123456789", "s1234567890123456789",
- "s1234567890123456789"};
-
-hsize_t dims5[] = { 3, 6};
-typedef struct {
- int a[8][10];
- char s[12][32];
-} compound_t;
-compound_t comp1[3][6];
-size_t mdims[2];
+ hid_t fid, dataset, space, f_type, m_type, str_type, f_type2;
+ hid_t array_dt;
+
+ hsize_t dims1[] = { 3, 4};
+ char string1[12][2] = {"s1","s2","s3","s4","s5","s6","s7","s8","s9",
+ "s0","s1","s2"};
+
+ hsize_t dims2[]={20};
+ char string2[20][9] = {"ab cd ef1", "ab cd ef2", "ab cd ef3", "ab cd ef4",
+ "ab cd ef5", "ab cd ef6", "ab cd ef7", "ab cd ef8",
+ "ab cd ef9", "ab cd ef0", "ab cd ef1", "ab cd ef2",
+ "ab cd ef3", "ab cd ef4", "ab cd ef5", "ab cd ef6",
+ "ab cd ef7", "ab cd ef8", "ab cd ef9", "ab cd ef0"};
+
+ hsize_t dims3[] = { 27};
+ char string3[27][5] = {"abcd0", "abcd1", "abcd2", "abcd3",
+ "abcd4", "abcd5", "abcd6", "abcd7",
+ "abcd8", "abcd9", "abcd0", "abcd1",
+ "abcd2", "abcd3", "abcd4", "abcd5",
+ "abcd6", "abcd7", "abcd8", "abcd9",
+ "abcd0", "abcd1", "abcd2", "abcd3",
+ "abcd4", "abcd5", "abcd6"};
+
+ int i, j, k, l;
+
+ hsize_t dims4[] = { 3 };
+ char string4[3][20] = { "s1234567890123456789", "s1234567890123456789",
+ "s1234567890123456789"};
+
+ hsize_t dims5[] = { 3, 6};
+ typedef struct {
+ int a[8][10];
+ char s[12][32];
+ } compound_t;
+ compound_t comp1[3][6];
+ hsize_t mdims[2];
fid = H5Fcreate(FILE13, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT);
@@ -1119,17 +1162,27 @@ size_t mdims[2];
space = H5Screate_simple(2, dims5, NULL);
f_type = H5Tcreate (H5T_COMPOUND, sizeof(compound_t));
f_type2 = H5Tcreate (H5T_COMPOUND, sizeof(compound_t));
+
mdims[0] = 8; mdims[1] = 10;
- H5Tinsert_array(f_type, "int_array", HOFFSET(compound_t, a), 2, mdims,
- NULL, H5T_STD_I32BE);
- H5Tinsert_array(f_type2, "int_array", HOFFSET(compound_t, a), 2, mdims,
- NULL, H5T_NATIVE_INT);
+
+ array_dt=H5Tarray_create(H5T_STD_I32BE,2,mdims,NULL);
+ H5Tinsert(f_type, "int_array", HOFFSET(compound_t, a), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_INT,2,mdims,NULL);
+ H5Tinsert(f_type2, "int_array", HOFFSET(compound_t, a), array_dt);
+ H5Tclose(array_dt);
+
str_type = mkstr(32, H5T_STR_SPACEPAD);
mdims[0] = 3; mdims[1] = 4;
- H5Tinsert_array(f_type, "string", HOFFSET(compound_t, s), 2, mdims,
- NULL, str_type);
- H5Tinsert_array(f_type2, "string", HOFFSET(compound_t, s), 2, mdims,
- NULL, str_type);
+
+ array_dt=H5Tarray_create(str_type,2,mdims,NULL);
+ H5Tinsert(f_type, "string", HOFFSET(compound_t, s), array_dt);
+ H5Tclose(array_dt);
+
+ array_dt=H5Tarray_create(str_type,2,mdims,NULL);
+ H5Tinsert(f_type2, "string", HOFFSET(compound_t, s), array_dt);
+ H5Tclose(array_dt);
for (i = 0; i < 3; i++)
for (j = 0; j < 6; j++) {
@@ -1574,14 +1627,16 @@ void test_datareg(void){
free(drbuf);
}
-void test_nestcomp(void){
+
/*taken from Elena's compound test file*/
+void test_nestcomp(void) {
/* Compound memeber of the compound datatype*/
typedef struct cmp_t {
- char a;
- float b[2];
+ char a;
+ float b[2];
} cmp_t;
+
/* First structure and dataset*/
typedef struct s1_t {
int a;
@@ -1589,11 +1644,11 @@ void test_nestcomp(void){
double c;
cmp_t d;
} s1_t;
- hid_t cmp_tid; /* Handle for the compound datatype */
- hid_t char_id; /* Handle for the string datatype */
- size_t array_dims[] = {2}; /* Dataspace dimensions */
- int ndims = 1; /* Number of dimensions in the array field */
-
+ hid_t cmp_tid; /* Handle for the compound datatype */
+ hid_t char_id; /* Handle for the string datatype */
+ hid_t array_dt;
+ hsize_t array_dims[] = {2}; /* Dataspace dimensions */
+ int ndims = 1; /* Number of dimensions in the array field */
s1_t s1[10];
hid_t s1_tid; /* File datatype identifier */
@@ -1604,6 +1659,8 @@ void test_nestcomp(void){
hsize_t dim[] = {10}; /* Dataspace dimensions */
char datasetname[] = "ArrayOfStructures";
+
+
/*
* Initialize the data
*/
@@ -1637,8 +1694,10 @@ void test_nestcomp(void){
char_id = H5Tcopy(H5T_C_S1);
H5Tset_strpad(char_id, H5T_STR_NULLTERM);
H5Tinsert(cmp_tid, "char_name", HOFFSET(cmp_t, a), char_id);
- H5Tinsert_array(cmp_tid, "array_name", HOFFSET(cmp_t, b), ndims,
- array_dims, NULL, H5T_NATIVE_FLOAT);
+
+ array_dt=H5Tarray_create(H5T_NATIVE_FLOAT,ndims,array_dims,NULL);
+ H5Tinsert(cmp_tid, "array_name", HOFFSET(cmp_t, b), array_dt);
+ H5Tclose(array_dt);
s1_tid = H5Tcreate (H5T_COMPOUND, sizeof(s1_t));
H5Tinsert(s1_tid, "a_name", HOFFSET(s1_t, a), H5T_NATIVE_INT);
@@ -1666,9 +1725,6 @@ void test_nestcomp(void){
H5Sclose(space);
H5Dclose(dataset);
H5Fclose(file);
-
-
-
}
void test_opaque(void) {