diff options
Diffstat (limited to 'tools/h5repack/h5repack_copy.c')
| -rw-r--r-- | tools/h5repack/h5repack_copy.c | 102 |
1 files changed, 65 insertions, 37 deletions
diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c index a49b2f7..312f085 100644 --- a/tools/h5repack/h5repack_copy.c +++ b/tools/h5repack/h5repack_copy.c @@ -76,15 +76,16 @@ int copy_objects(const char* fnamein, hid_t fidin; hid_t fidout = -1; trav_table_t *travt = NULL; - hsize_t ub_size = 0; /* Size of user block */ - hid_t fapl = H5P_DEFAULT; /* File access property list ID */ - hid_t fcpl = H5P_DEFAULT; /* File creation property list ID */ + hsize_t ub_size = 0; /* size of user block */ + hid_t fcpl = H5P_DEFAULT; /* file creation property list ID */ + hid_t fapl = H5P_DEFAULT; /* file access property list ID */ /*------------------------------------------------------------------------- - * open the files + * open input file *------------------------------------------------------------------------- */ - if((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0) { + if((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0) + { error_msg(progname, "<%s>: %s\n", fnamein, H5FOPENERROR ); goto out; } @@ -92,50 +93,63 @@ int copy_objects(const char* fnamein, /* get user block size */ { hid_t fcpl_in; /* file creation property list ID for input file */ - - if((fcpl_in = H5Fget_create_plist(fidin)) < 0) { + + if((fcpl_in = H5Fget_create_plist(fidin)) < 0) + { error_msg(progname, "failed to retrieve file creation property list\n"); goto out; - } /* end if */ - - if(H5Pget_userblock(fcpl_in, &ub_size) < 0) { + } + + if(H5Pget_userblock(fcpl_in, &ub_size) < 0) + { error_msg(progname, "failed to retrieve userblock size\n"); goto out; - } /* end if */ - - if(H5Pclose(fcpl_in) < 0) { + } + + if(H5Pclose(fcpl_in) < 0) + { error_msg(progname, "failed to close property list\n"); goto out; - } /* end if */ - } /* end block */ + } + } /* Check if we need to create a non-default file creation property list */ - if(options->latest || ub_size > 0) { + if(options->latest || ub_size > 0) + { /* Create file creation property list */ - if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) { + if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) + { error_msg(progname, "fail to create a file creation property list\n"); goto out; - } /* end if */ + } if(ub_size > 0) - if(H5Pset_userblock(fcpl, ub_size) < 0) { + { + if(H5Pset_userblock(fcpl, ub_size) < 0) + { error_msg(progname, "failed to set non-default userblock size\n"); goto out; - } /* end if */ + } + } - if(options->latest) { + if(options->latest) + { unsigned i = 0, nindex = 0, mesg_type_flags[5], min_mesg_sizes[5]; /* Adjust group creation parameters for root group */ /* (So that it is created in "dense storage" form) */ - if(H5Pset_link_phase_change(fcpl, (unsigned)options->grp_compact, (unsigned)options->grp_indexed) < 0) { + if(H5Pset_link_phase_change(fcpl, (unsigned)options->grp_compact, (unsigned)options->grp_indexed) < 0) + { error_msg(progname, "fail to adjust group creation parameters for root group\n"); goto out; - } /* end if */ + } - for(i = 0; i < 5; i++) { - if(options->msg_size[i] > 0) { - switch(i) { + for(i = 0; i < 5; i++) + { + if(options->msg_size[i] > 0) + { + switch(i) + { case 0: mesg_type_flags[nindex] = H5O_SHMESG_SDSPACE_FLAG; break; @@ -162,14 +176,17 @@ int copy_objects(const char* fnamein, } /* end if */ } /* end for */ - if(nindex > 0) { - if(H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0) { + if(nindex > 0) + { + if(H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0) + { error_msg(progname, "fail to set the number of shared object header message indexes\n"); goto out; - } /* end if */ + } /* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipleline, 4=attribute */ - for(i = 0; i < (nindex - 1); i++) { + for(i = 0; i < (nindex - 1); i++) + { if(H5Pset_shared_mesg_index(fcpl, i, mesg_type_flags[i], min_mesg_sizes[i]) < 0) { error_msg(progname, "fail to configure the specified shared object header message index\n"); goto out; @@ -178,12 +195,14 @@ int copy_objects(const char* fnamein, } /* if (nindex>0) */ /* Create file access property list */ - if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) { + if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) + { error_msg(progname, "Could not create file access property list\n"); goto out; } /* end if */ - if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) { + if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) + { error_msg(progname, "Could not set property for using latest version of the format\n"); goto out; } /* end if */ @@ -249,7 +268,7 @@ int copy_objects(const char* fnamein, if ( options->alignment > 0 ) { - /* either use the FCPL already created or create a new one */ + /* either use the FAPL already created or create a new one */ if (fapl != H5P_DEFAULT) { @@ -313,7 +332,10 @@ int copy_objects(const char* fnamein, } } - + /*------------------------------------------------------------------------- + * get list of objects + *------------------------------------------------------------------------- + */ /* init table */ trav_table_init(&travt); @@ -326,7 +348,8 @@ int copy_objects(const char* fnamein, * do the copy *------------------------------------------------------------------------- */ - if(do_copy_objects(fidin, fidout, travt, options) < 0) { + if(do_copy_objects(fidin, fidout, travt, options) < 0) + { error_msg(progname, "<%s>: Could not copy data to: %s\n", fnamein, fnameout); goto out; } /* end if */ @@ -383,7 +406,8 @@ int copy_objects(const char* fnamein, */ out: - H5E_BEGIN_TRY { + H5E_BEGIN_TRY + { H5Pclose(fapl); H5Pclose(fcpl); H5Fclose(fidin); @@ -582,7 +606,11 @@ int do_copy_objects(hid_t fidin, has_filter = 0; req_filter = 0; - /* check if filters were requested */ + /* check if global filters were requested */ + if ( options->n_filter_g ) + req_filter = 1; + + /* check if filters were requested for individual objects */ for( u = 0; u < options->op_tbl->nelems; u++) { int k; |