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Diffstat (limited to 'tools/h5repack/h5repack_refs.c')
-rw-r--r--tools/h5repack/h5repack_refs.c151
1 files changed, 77 insertions, 74 deletions
diff --git a/tools/h5repack/h5repack_refs.c b/tools/h5repack/h5repack_refs.c
index 3f99704..b2755c2 100644
--- a/tools/h5repack/h5repack_refs.c
+++ b/tools/h5repack/h5repack_refs.c
@@ -50,6 +50,7 @@ int do_copy_refobjs(hid_t fidin,
trav_table_t *travt,
pack_opt_t *options) /* repack options */
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t grp_in = (-1); /* read group ID */
hid_t grp_out = (-1); /* write group ID */
hid_t dset_in = (-1); /* read dataset ID */
@@ -85,18 +86,18 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((grp_out = H5Gopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if((grp_in = H5Gopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gopen2 failed");
if(copy_refs_attr(grp_in, grp_out, options, travt, fidout) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_refs_attr failed");
if(H5Gclose(grp_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
if(H5Gclose(grp_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Gclose failed");
/*-------------------------------------------------------------------------
* check for hard links
@@ -113,26 +114,26 @@ int do_copy_refobjs(hid_t fidin,
*/
case H5TRAV_TYPE_DATASET:
if((dset_in = H5Dopen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
if((space_id = H5Dget_space(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_space failed");
if((ftype_id = H5Dget_type(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_type failed");
if((dcpl_id = H5Dget_create_plist(dset_in)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dget_create_plist failed");
if((rank = H5Sget_simple_extent_ndims(space_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_ndims failed");
if(H5Sget_simple_extent_dims(space_id, dims, NULL) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
nelmts = 1;
for(k = 0; k < rank; k++)
nelmts *= dims[k];
if((mtype_id = h5tools_get_native_type(ftype_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_get_native_type failed");
if((msize = H5Tget_size(mtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
/*-------------------------------------------------------------------------
* check if the dataset creation property list has filters that
@@ -168,15 +169,15 @@ int do_copy_refobjs(hid_t fidin,
buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf==NULL) {
printf("cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed");
refbuf = (hobj_ref_t*) HDcalloc((unsigned)nelmts, msize);
if(refbuf == NULL){
printf("cannot allocate memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(u = 0; u < nelmts; u++) {
H5E_BEGIN_TRY {
@@ -190,7 +191,7 @@ int do_copy_refobjs(hid_t fidin,
if((refname = MapIdToName(refobj_id, travt)) != NULL) {
/* create the reference, -1 parameter for objects */
if(H5Rcreate(&refbuf[u], fidout, refname, H5R_OBJECT, (hid_t)-1) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
if(options->verbose)
{
printf(FORMAT_OBJ,"dset",travt->objs[i].name );
@@ -208,10 +209,10 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
if(nelmts)
if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dwrite failed");
if(buf)
HDfree(buf);
@@ -222,7 +223,7 @@ int do_copy_refobjs(hid_t fidin,
* copy attrs
*----------------------------------------------------*/
if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
} /*H5T_STD_REF_OBJ*/
/*-------------------------------------------------------------------------
@@ -245,10 +246,10 @@ int do_copy_refobjs(hid_t fidin,
buf = (hdset_reg_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf == NULL) {
printf("cannot read into memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Dread(dset_in, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dread failed");
/*-------------------------------------------------------------------------
* create output
@@ -257,7 +258,7 @@ int do_copy_refobjs(hid_t fidin,
refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
if(refbuf == NULL) {
printf("cannot allocate memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(u = 0; u < nelmts; u++) {
@@ -273,13 +274,13 @@ int do_copy_refobjs(hid_t fidin,
hid_t region_id; /* region id of the referenced dataset */
if((region_id = H5Rget_region(dset_in, H5R_DATASET_REGION, &buf[u])) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_region failed");
/* create the reference, we need the space_id */
if(H5Rcreate(&refbuf[u], fidout, refname, H5R_DATASET_REGION, region_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
if(H5Sclose(region_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(options->verbose)
{
@@ -300,10 +301,10 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if((dset_out = H5Dcreate2(fidout, travt->objs[i].name, mtype_id, space_id, H5P_DEFAULT, dcpl_id, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dcreate2 failed");
if(nelmts)
if(H5Dwrite(dset_out, mtype_id, H5S_ALL, H5S_ALL, H5P_DEFAULT, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dwrite failed");
if(buf)
HDfree(buf);
@@ -314,7 +315,7 @@ int do_copy_refobjs(hid_t fidin,
* copy attrs
*----------------------------------------------------*/
if(copy_attr(dset_in, dset_out, &named_dt_head, travt, options) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_attr failed");
} /* H5T_STD_REF_DSETREG */
/*-------------------------------------------------------------------------
* not references, open previously created object in 1st traversal
@@ -322,7 +323,7 @@ int do_copy_refobjs(hid_t fidin,
*/
else {
if((dset_out = H5Dopen2(fidout, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dopen2 failed");
} /* end else */
HDassert(dset_out != FAIL);
@@ -332,7 +333,7 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if(copy_refs_attr(dset_in, dset_out, options, travt, fidout) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "copy_refs_attr failed");
/*-------------------------------------------------------------------------
* check for hard links
@@ -343,7 +344,7 @@ int do_copy_refobjs(hid_t fidin,
H5Lcreate_hard(fidout, travt->objs[i].name, H5L_SAME_LOC, travt->objs[i].links[j].new_name, H5P_DEFAULT, H5P_DEFAULT);
if(H5Dclose(dset_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
} /*can_read*/
/*-------------------------------------------------------------------------
@@ -351,15 +352,15 @@ int do_copy_refobjs(hid_t fidin,
*-------------------------------------------------------------------------
*/
if(H5Tclose(ftype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Tclose(mtype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Pclose(dcpl_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Pclose failed");
if(H5Sclose(space_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(H5Dclose(dset_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Dclose failed");
break;
/*-------------------------------------------------------------------------
@@ -368,9 +369,9 @@ int do_copy_refobjs(hid_t fidin,
*/
case H5TRAV_TYPE_NAMED_DATATYPE:
if((type_in = H5Topen2(fidin, travt->objs[i].name, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Topen2 failed");
if(H5Tclose(type_in) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
break;
/*-------------------------------------------------------------------------
@@ -383,7 +384,7 @@ int do_copy_refobjs(hid_t fidin,
case H5TRAV_TYPE_UNKNOWN:
case H5TRAV_TYPE_UDLINK:
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5TRAV invalid type");
default:
break;
@@ -398,7 +399,7 @@ int do_copy_refobjs(hid_t fidin,
return 0;
-error:
+done:
H5E_BEGIN_TRY {
H5Gclose(grp_in);
H5Gclose(grp_out);
@@ -450,6 +451,7 @@ static int copy_refs_attr(hid_t loc_in,
hid_t fidout /* for saving references */
)
{
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
hid_t attr_id = -1; /* attr ID */
hid_t attr_out = -1; /* attr ID */
hid_t space_id = -1; /* space ID */
@@ -473,26 +475,26 @@ static int copy_refs_attr(hid_t loc_in,
if(H5Oget_info(loc_in, &oinfo) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Oget_info failed");
for(u = 0; u < (unsigned)oinfo.num_attrs; u++) {
is_ref = is_ref_vlen = is_ref_array = is_ref_comp = 0;
/* open attribute */
if((attr_id = H5Aopen_by_idx(loc_in, ".", H5_INDEX_CRT_ORDER, H5_ITER_INC, (hsize_t)u, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aopen_by_idx failed");
/* get the file datatype */
if((ftype_id = H5Aget_type(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_type failed");
type_class = H5Tget_class(ftype_id);
if((mtype_id = h5tools_get_native_type(ftype_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "h5tools_get_native_type failed");
if((msize = H5Tget_size(mtype_id)) == 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_size failed");
is_ref = (type_class == H5T_REFERENCE);
@@ -516,7 +518,7 @@ static int copy_refs_attr(hid_t loc_in,
int nmembers = H5Tget_nmembers(ftype_id) ;
if (nmembers < 1)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tget_nmembers failed");
ref_comp_index = (int *)HDmalloc(nmembers*sizeof (int));
ref_comp_size = (size_t *)HDmalloc(nmembers*sizeof(ref_comp_size));
@@ -560,15 +562,15 @@ static int copy_refs_attr(hid_t loc_in,
/* get name */
if(H5Aget_name(attr_id, 255, name) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_name failed");
/* get the dataspace handle */
if((space_id = H5Aget_space(attr_id)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aget_space failed");
/* get dimensions */
if((rank = H5Sget_simple_extent_dims(space_id, dims, NULL)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sget_simple_extent_dims failed");
/*-------------------------------------------------------------------------
@@ -597,7 +599,7 @@ static int copy_refs_attr(hid_t loc_in,
}
if((attr_out = H5Acreate2(loc_out, name, ftype_id, space_id, H5P_DEFAULT, H5P_DEFAULT)) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Acreate2 failed");
if (nelmts>0) {
/* handle object references */
@@ -605,15 +607,15 @@ static int copy_refs_attr(hid_t loc_in,
buf = (hobj_ref_t *)HDmalloc((unsigned)(nelmts * msize));
if(buf == NULL) {
printf("cannot read into memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
refbuf = (hobj_ref_t *)HDcalloc((unsigned)nelmts, msize);
if(refbuf == NULL) {
printf("cannot allocate memory\n");
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(i = 0; i < (unsigned)nelmts; i++) {
@@ -629,10 +631,10 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL) {
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
/*-------------------------------------------------------------------------
* create output
@@ -641,7 +643,7 @@ static int copy_refs_attr(hid_t loc_in,
refbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)nelmts); /*init to zero */
if(refbuf == NULL) {
printf( "cannot allocate memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDcalloc failed");
} /* end if */
for(i = 0; i < (unsigned)nelmts; i++) {
@@ -659,11 +661,11 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL) {
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
if (H5R_OBJ_REF_BUF_SIZE==msize) {
hobj_ref_t ref_out;
@@ -700,11 +702,11 @@ static int copy_refs_attr(hid_t loc_in,
if(buf == NULL)
{
printf( "cannot read into memory\n" );
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "HDmalloc failed");
} /* end if */
if(H5Aread(attr_id, mtype_id, buf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aread failed");
for (i=0; i<(unsigned)nelmts; i++) {
for (j=0; j<(unsigned)ref_comp_field_n; j++) {
@@ -727,7 +729,7 @@ static int copy_refs_attr(hid_t loc_in,
} /* else if (is_ref_comp) */
if(H5Awrite(attr_out, mtype_id, refbuf) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Awrite failed");
if (is_ref_vlen && buf)
H5Dvlen_reclaim (mtype_id, space_id, H5P_DEFAULT, buf);
@@ -757,25 +759,25 @@ static int copy_refs_attr(hid_t loc_in,
}
if(H5Aclose(attr_out) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
/*-------------------------------------------------------------------------
* close
*-------------------------------------------------------------------------
*/
if(H5Tclose(ftype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Tclose(mtype_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Tclose failed");
if(H5Sclose(space_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Sclose failed");
if(H5Aclose(attr_id) < 0)
- goto error;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Aclose failed");
} /* for(u = 0; u < (unsigned)oinfo.num_attrs; u++) */
return 0;
-error:
+done:
if(refbuf)
HDfree(refbuf);
if(buf)
@@ -845,28 +847,29 @@ out:
static herr_t update_ref_value(hid_t obj_id, H5R_type_t ref_type, void *ref_in,
hid_t fid_out, void *ref_out, trav_table_t *travt)
{
- herr_t ret = -1;
+ int ret_value = 0; /*no need to LEAVE() on ERROR: HERR_INIT(int, SUCCEED) */
+ herr_t ret = -1;
const char* ref_obj_name;
hid_t space_id=-1, ref_obj_id=-1;
ref_obj_id = H5Rdereference2(obj_id, H5P_DEFAULT, ref_type, ref_in);
if (ref_obj_id<0)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rdereference2 failed");
ref_obj_name = MapIdToName(ref_obj_id, travt);
if (ref_obj_name == NULL)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "MapIdToName failed");
if (ref_type == H5R_DATASET_REGION) {
space_id = H5Rget_region(obj_id, H5R_DATASET_REGION, ref_in);
if (space_id < 0)
- goto done;
- }
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rget_region failed");
+ }
ret = H5Rcreate(ref_out, fid_out, ref_obj_name, ref_type, space_id);
if (ret < 0)
- goto done;
+ HGOTO_ERROR(H5E_tools_g, H5E_tools_min_id_g, "H5Rcreate failed");
ret = 0;
generated by cgit v0.12 at 2024-11-01 23:35:06 (GMT)