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-rw-r--r--tools/h5repack/h5repack_copy.c102
-rw-r--r--tools/h5repack/h5repack_main.c4
2 files changed, 67 insertions, 39 deletions
diff --git a/tools/h5repack/h5repack_copy.c b/tools/h5repack/h5repack_copy.c
index a49b2f7..312f085 100644
--- a/tools/h5repack/h5repack_copy.c
+++ b/tools/h5repack/h5repack_copy.c
@@ -76,15 +76,16 @@ int copy_objects(const char* fnamein,
hid_t fidin;
hid_t fidout = -1;
trav_table_t *travt = NULL;
- hsize_t ub_size = 0; /* Size of user block */
- hid_t fapl = H5P_DEFAULT; /* File access property list ID */
- hid_t fcpl = H5P_DEFAULT; /* File creation property list ID */
+ hsize_t ub_size = 0; /* size of user block */
+ hid_t fcpl = H5P_DEFAULT; /* file creation property list ID */
+ hid_t fapl = H5P_DEFAULT; /* file access property list ID */
/*-------------------------------------------------------------------------
- * open the files
+ * open input file
*-------------------------------------------------------------------------
*/
- if((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0) {
+ if((fidin = h5tools_fopen(fnamein, H5F_ACC_RDONLY, H5P_DEFAULT, NULL, NULL, (size_t)0)) < 0)
+ {
error_msg(progname, "<%s>: %s\n", fnamein, H5FOPENERROR );
goto out;
}
@@ -92,50 +93,63 @@ int copy_objects(const char* fnamein,
/* get user block size */
{
hid_t fcpl_in; /* file creation property list ID for input file */
-
- if((fcpl_in = H5Fget_create_plist(fidin)) < 0) {
+
+ if((fcpl_in = H5Fget_create_plist(fidin)) < 0)
+ {
error_msg(progname, "failed to retrieve file creation property list\n");
goto out;
- } /* end if */
-
- if(H5Pget_userblock(fcpl_in, &ub_size) < 0) {
+ }
+
+ if(H5Pget_userblock(fcpl_in, &ub_size) < 0)
+ {
error_msg(progname, "failed to retrieve userblock size\n");
goto out;
- } /* end if */
-
- if(H5Pclose(fcpl_in) < 0) {
+ }
+
+ if(H5Pclose(fcpl_in) < 0)
+ {
error_msg(progname, "failed to close property list\n");
goto out;
- } /* end if */
- } /* end block */
+ }
+ }
/* Check if we need to create a non-default file creation property list */
- if(options->latest || ub_size > 0) {
+ if(options->latest || ub_size > 0)
+ {
/* Create file creation property list */
- if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) {
+ if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0)
+ {
error_msg(progname, "fail to create a file creation property list\n");
goto out;
- } /* end if */
+ }
if(ub_size > 0)
- if(H5Pset_userblock(fcpl, ub_size) < 0) {
+ {
+ if(H5Pset_userblock(fcpl, ub_size) < 0)
+ {
error_msg(progname, "failed to set non-default userblock size\n");
goto out;
- } /* end if */
+ }
+ }
- if(options->latest) {
+ if(options->latest)
+ {
unsigned i = 0, nindex = 0, mesg_type_flags[5], min_mesg_sizes[5];
/* Adjust group creation parameters for root group */
/* (So that it is created in "dense storage" form) */
- if(H5Pset_link_phase_change(fcpl, (unsigned)options->grp_compact, (unsigned)options->grp_indexed) < 0) {
+ if(H5Pset_link_phase_change(fcpl, (unsigned)options->grp_compact, (unsigned)options->grp_indexed) < 0)
+ {
error_msg(progname, "fail to adjust group creation parameters for root group\n");
goto out;
- } /* end if */
+ }
- for(i = 0; i < 5; i++) {
- if(options->msg_size[i] > 0) {
- switch(i) {
+ for(i = 0; i < 5; i++)
+ {
+ if(options->msg_size[i] > 0)
+ {
+ switch(i)
+ {
case 0:
mesg_type_flags[nindex] = H5O_SHMESG_SDSPACE_FLAG;
break;
@@ -162,14 +176,17 @@ int copy_objects(const char* fnamein,
} /* end if */
} /* end for */
- if(nindex > 0) {
- if(H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0) {
+ if(nindex > 0)
+ {
+ if(H5Pset_shared_mesg_nindexes(fcpl, nindex) < 0)
+ {
error_msg(progname, "fail to set the number of shared object header message indexes\n");
goto out;
- } /* end if */
+ }
/* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipleline, 4=attribute */
- for(i = 0; i < (nindex - 1); i++) {
+ for(i = 0; i < (nindex - 1); i++)
+ {
if(H5Pset_shared_mesg_index(fcpl, i, mesg_type_flags[i], min_mesg_sizes[i]) < 0) {
error_msg(progname, "fail to configure the specified shared object header message index\n");
goto out;
@@ -178,12 +195,14 @@ int copy_objects(const char* fnamein,
} /* if (nindex>0) */
/* Create file access property list */
- if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0)
+ {
error_msg(progname, "Could not create file access property list\n");
goto out;
} /* end if */
- if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) {
+ if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0)
+ {
error_msg(progname, "Could not set property for using latest version of the format\n");
goto out;
} /* end if */
@@ -249,7 +268,7 @@ int copy_objects(const char* fnamein,
if ( options->alignment > 0 )
{
- /* either use the FCPL already created or create a new one */
+ /* either use the FAPL already created or create a new one */
if (fapl != H5P_DEFAULT)
{
@@ -313,7 +332,10 @@ int copy_objects(const char* fnamein,
}
}
-
+ /*-------------------------------------------------------------------------
+ * get list of objects
+ *-------------------------------------------------------------------------
+ */
/* init table */
trav_table_init(&travt);
@@ -326,7 +348,8 @@ int copy_objects(const char* fnamein,
* do the copy
*-------------------------------------------------------------------------
*/
- if(do_copy_objects(fidin, fidout, travt, options) < 0) {
+ if(do_copy_objects(fidin, fidout, travt, options) < 0)
+ {
error_msg(progname, "<%s>: Could not copy data to: %s\n", fnamein, fnameout);
goto out;
} /* end if */
@@ -383,7 +406,8 @@ int copy_objects(const char* fnamein,
*/
out:
- H5E_BEGIN_TRY {
+ H5E_BEGIN_TRY
+ {
H5Pclose(fapl);
H5Pclose(fcpl);
H5Fclose(fidin);
@@ -582,7 +606,11 @@ int do_copy_objects(hid_t fidin,
has_filter = 0;
req_filter = 0;
- /* check if filters were requested */
+ /* check if global filters were requested */
+ if ( options->n_filter_g )
+ req_filter = 1;
+
+ /* check if filters were requested for individual objects */
for( u = 0; u < options->op_tbl->nelems; u++)
{
int k;
diff --git a/tools/h5repack/h5repack_main.c b/tools/h5repack/h5repack_main.c
index 1ec8e88..27e59ae 100644
--- a/tools/h5repack/h5repack_main.c
+++ b/tools/h5repack/h5repack_main.c
@@ -95,8 +95,8 @@ static struct long_options l_opts[] = {
*/
int main(int argc, const char **argv)
{
- const char *infile = NULL;
- const char *outfile = NULL;
+ const char *infile = NULL;
+ const char *outfile = NULL;
pack_opt_t options; /*the global options */
int ret=-1;
int i;
generated by cgit v0.12 at 2024-11-18 11:20:28 (GMT)