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-rw-r--r--tools/lib/h5diff_dset.c1701
1 files changed, 983 insertions, 718 deletions
diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c
index d7c5639..b5c3290 100644
--- a/tools/lib/h5diff_dset.c
+++ b/tools/lib/h5diff_dset.c
@@ -1,17 +1,14 @@
/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
-* Copyright by The HDF Group. *
-* Copyright by the Board of Trustees of the University of Illinois. *
-* All rights reserved. *
-* *
-* This file is part of HDF5. The full HDF5 copyright notice, including *
-* terms governing use, modification, and redistribution, is contained in *
-* the files COPYING and Copyright.html. COPYING can be found at the root *
-* of the source code distribution tree; Copyright.html can be found at the *
-* root level of an installed copy of the electronic HDF5 document set and *
-* is linked from the top-level documents page. It can also be found at *
-* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
-* access to either file, you may request a copy from help@hdfgroup.org. *
-* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the COPYING file, which can be found at the root of the source code *
+ * distribution tree, or in https://www.hdfgroup.org/licenses. *
+ * If you do not have access to either file, you may request a copy from *
+ * help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
#include "H5private.h"
#include "h5tools.h"
@@ -19,946 +16,1214 @@
#include "h5diff.h"
#include "ph5diff.h"
-
/*-------------------------------------------------------------------------
-* Function: diff_dataset
-*
-* Purpose: check for comparable datasets and read into a compatible
-* memory type
-*
-* Return: Number of differences found
-*
-* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
-*
-* Date: May 9, 2003
-*
-*-------------------------------------------------------------------------
-*/
-hsize_t diff_dataset( hid_t file1_id,
- hid_t file2_id,
- const char *obj1_name,
- const char *obj2_name,
- diff_opt_t *options)
+ * Function: diff_dataset
+ *
+ * Purpose: check for comparable datasets and read into a compatible
+ * memory type
+ *
+ * Return: Number of differences found
+ *-------------------------------------------------------------------------
+ */
+hsize_t
+diff_dataset(hid_t file1_id, hid_t file2_id, const char *obj1_name, const char *obj2_name, diff_opt_t *opts)
{
- hid_t did1 = -1;
- hid_t did2 = -1;
- hid_t dcpl1 = -1;
- hid_t dcpl2 = -1;
- hsize_t nfound = 0;
-
+ int status = -1;
+ hid_t did1 = H5I_INVALID_HID;
+ hid_t did2 = H5I_INVALID_HID;
+ hid_t dcpl1 = H5I_INVALID_HID;
+ hid_t dcpl2 = H5I_INVALID_HID;
+ hsize_t nfound = 0;
+ diff_opt_t diff_opts;
+ diff_err_t ret_value = opts->err_stat;
+
+ H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
+ diff_opts = *opts;
+ diff_opts.obj_name[0] = NULL;
+ diff_opts.obj_name[1] = NULL;
+
+ H5TOOLS_DEBUG("obj_names: %s - %s", obj1_name, obj2_name);
/*-------------------------------------------------------------------------
- * open the handles
- *-------------------------------------------------------------------------
- */
- /* disable error reporting */
- H5E_BEGIN_TRY
- {
- /* Open the datasets */
- if((did1 = H5Dopen2(file1_id, obj1_name, H5P_DEFAULT)) < 0)
- {
- parallel_print("Cannot open dataset <%s>\n", obj1_name);
- goto error;
- }
- if((did2 = H5Dopen2(file2_id, obj2_name, H5P_DEFAULT)) < 0)
- {
- parallel_print("Cannot open dataset <%s>\n", obj2_name);
- goto error;
- }
- /* enable error reporting */
- } H5E_END_TRY;
-
-
- if((dcpl1 = H5Dget_create_plist(did1)) < 0)
- goto error;
- if((dcpl2 = H5Dget_create_plist(did2)) < 0)
- {
- goto error;
+ * open the handles
+ *-------------------------------------------------------------------------
+ */
+ /* Open the datasets */
+ if ((did1 = H5Dopen2(file1_id, obj1_name, H5P_DEFAULT)) < 0) {
+ parallel_print("Cannot open dataset <%s>\n", obj1_name);
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 first dataset failed");
+ }
+ if ((did2 = H5Dopen2(file2_id, obj2_name, H5P_DEFAULT)) < 0) {
+ parallel_print("Cannot open dataset <%s>\n", obj2_name);
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dopen2 second dataset failed");
}
+ if ((dcpl1 = H5Dget_create_plist(did1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist first dataset failed");
+ if ((dcpl2 = H5Dget_create_plist(did2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist second dataset failed");
+
/*-------------------------------------------------------------------------
- * check if the dataset creation property list has filters that
- * are not registered in the current configuration
- * 1) the external filters GZIP and SZIP might not be available
- * 2) the internal filters might be turned off
- *-------------------------------------------------------------------------
- */
- if ((h5tools_canreadf((options->m_verbose?obj1_name:NULL),dcpl1)==1) &&
- (h5tools_canreadf((options->m_verbose?obj2_name:NULL),dcpl2)==1))
- {
- nfound=diff_datasetid(did1,
- did2,
- obj1_name,
- obj2_name,
- options);
+ * check if the dataset creation property list has filters that
+ * are not registered in the current configuration
+ * 1) the external filters GZIP and SZIP might not be available
+ * 2) the internal filters might be turned off
+ *-------------------------------------------------------------------------
+ */
+ H5TOOLS_DEBUG("h5tools_canreadf then diff_datasetid");
+ if ((status = h5tools_canreadf((opts->mode_verbose ? obj1_name : NULL), dcpl1) == 1) &&
+ (status = h5tools_canreadf((opts->mode_verbose ? obj2_name : NULL), dcpl2) == 1))
+ nfound = diff_datasetid(did1, did2, obj1_name, obj2_name, &diff_opts);
+ else if (status < 0) {
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "h5tools_canreadf failed");
+ }
+ else {
+ ret_value = 1;
+ diff_opts.not_cmp = 1;
}
- /*-------------------------------------------------------------------------
- * close
- *-------------------------------------------------------------------------
- */
- /* disable error reporting */
- H5E_BEGIN_TRY {
- H5Pclose(dcpl1);
- H5Pclose(dcpl2);
- H5Dclose(did1);
- H5Dclose(did2);
- /* enable error reporting */
- } H5E_END_TRY;
-
- return nfound;
+done:
+ opts->print_header = diff_opts.print_header;
+ opts->not_cmp = diff_opts.not_cmp;
+ opts->err_stat = diff_opts.err_stat | ret_value;
-error:
- options->err_stat=1;
/* disable error reporting */
- H5E_BEGIN_TRY {
+ H5E_BEGIN_TRY
+ {
H5Pclose(dcpl1);
H5Pclose(dcpl2);
H5Dclose(did1);
H5Dclose(did2);
/* enable error reporting */
- } H5E_END_TRY;
+ }
+ H5E_END_TRY;
+ H5TOOLS_ENDDEBUG(":%d - errstat:%d", nfound, opts->err_stat);
return nfound;
}
/*-------------------------------------------------------------------------
-* Function: diff_datasetid
-*
-* Purpose: check for comparable datasets and read into a compatible
-* memory type
-*
-* Return: Number of differences found
-*
-* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
-*
-* Date: May 9, 2003
-*
-* Modifications:
-*
-*
-* October 2006: Read by hyperslabs for big datasets.
-*
-* A threshold of H5TOOLS_MALLOCSIZE (128 MB) is the limit upon which I/O hyperslab is done
-* i.e., if the memory needed to read a dataset is greater than this limit,
-* then hyperslab I/O is done instead of one operation I/O
-* For each dataset, the memory needed is calculated according to
-*
-* memory needed = number of elements * size of each element
-*
-* if the memory needed is lower than H5TOOLS_MALLOCSIZE, then the following operations
-* are done
-*
-* H5Dread( input_dataset1 )
-* H5Dread( input_dataset2 )
-*
-* with all elements in the datasets selected. If the memory needed is greater than
-* H5TOOLS_MALLOCSIZE, then the following operations are done instead:
-*
-* a strip mine is defined for each dimension k (a strip mine is defined as a
-* hyperslab whose size is memory manageable) according to the formula
-*
-* (1) strip_mine_size[k ] = MIN(dimension[k ], H5TOOLS_BUFSIZE / size of memory type)
-*
-* where H5TOOLS_BUFSIZE is a constant currently defined as 1MB. This formula assures
-* that for small datasets (small relative to the H5TOOLS_BUFSIZE constant), the strip
-* mine size k is simply defined as its dimension k, but for larger datasets the
-* hyperslab size is still memory manageable.
-* a cycle is done until the number of elements in the dataset is reached. In each
-* iteration, two parameters are defined for the function H5Sselect_hyperslab,
-* the start and size of each hyperslab, according to
-*
-* (2) hyperslab_size [k] = MIN(dimension[k] - hyperslab_offset[k], strip_mine_size [k])
-*
-* where hyperslab_offset [k] is initially set to zero, and later incremented in
-* hyperslab_size[k] offsets. The reason for the operation
-*
-* dimension[k] - hyperslab_offset[k]
-*
-* in (2) is that, when using the strip mine size, it assures that the "remaining" part
-* of the dataset that does not fill an entire strip mine is processed.
-*
-*-------------------------------------------------------------------------
-*/
-hsize_t diff_datasetid( hid_t did1,
- hid_t did2,
- const char *obj1_name,
- const char *obj2_name,
- diff_opt_t *options)
+ * Function: diff_datasetid
+ *
+ * Purpose: check for comparable datasets and read into a compatible
+ * memory type
+ *
+ * Return: Number of differences found
+ *
+ * October 2006: Read by hyperslabs for big datasets.
+ *
+ * A threshold of H5TOOLS_MALLOCSIZE (128 MB) is the limit upon which I/O hyperslab is done
+ * i.e., if the memory needed to read a dataset is greater than this limit,
+ * then hyperslab I/O is done instead of one operation I/O
+ * For each dataset, the memory needed is calculated according to
+ *
+ * memory needed = number of elements * size of each element
+ *
+ * if the memory needed is lower than H5TOOLS_MALLOCSIZE, then the following operations
+ * are done
+ *
+ * H5Dread( input_dataset1 )
+ * H5Dread( input_dataset2 )
+ *
+ * with all elements in the datasets selected. If the memory needed is greater than
+ * H5TOOLS_MALLOCSIZE, then the following operations are done instead:
+ *
+ * a strip mine is defined for each dimension k (a strip mine is defined as a
+ * hyperslab whose size is memory manageable) according to the formula
+ *
+ * (1) strip_mine_size[k ] = MIN(dimension[k ], H5TOOLS_BUFSIZE / size of memory type)
+ *
+ * where H5TOOLS_BUFSIZE is a constant currently defined as 1MB. This formula assures
+ * that for small datasets (small relative to the H5TOOLS_BUFSIZE constant), the strip
+ * mine size k is simply defined as its dimension k, but for larger datasets the
+ * hyperslab size is still memory manageable.
+ * a cycle is done until the number of elements in the dataset is reached. In each
+ * iteration, two parameters are defined for the function H5Sselect_hyperslab,
+ * the start and size of each hyperslab, according to
+ *
+ * (2) hyperslab_size [k] = MIN(dimension[k] - hyperslab_offset[k], strip_mine_size [k])
+ *
+ * where hyperslab_offset [k] is initially set to zero, and later incremented in
+ * hyperslab_size[k] offsets. The reason for the operation
+ *
+ * dimension[k] - hyperslab_offset[k]
+ *
+ * in (2) is that, when using the strip mine size, it assures that the "remaining" part
+ * of the dataset that does not fill an entire strip mine is processed.
+ *
+ *-------------------------------------------------------------------------
+ */
+hsize_t
+diff_datasetid(hid_t did1, hid_t did2, const char *obj1_name, const char *obj2_name, diff_opt_t *opts)
{
- hid_t sid1=-1;
- hid_t sid2=-1;
- hid_t f_tid1=-1;
- hid_t f_tid2=-1;
- hid_t m_tid1=-1;
- hid_t m_tid2=-1;
- size_t m_size1;
- size_t m_size2;
- H5T_sign_t sign1;
- H5T_sign_t sign2;
- int rank1;
- int rank2;
- hsize_t nelmts1;
- hsize_t nelmts2;
- hsize_t dims1[H5S_MAX_RANK];
- hsize_t dims2[H5S_MAX_RANK];
- hsize_t maxdim1[H5S_MAX_RANK];
- hsize_t maxdim2[H5S_MAX_RANK];
- const char *name1=NULL; /* relative names */
- const char *name2=NULL;
- hsize_t storage_size1;
- hsize_t storage_size2;
- hsize_t nfound=0; /* number of differences found */
- int can_compare=1; /* do diff or not */
- void *buf1=NULL;
- void *buf2=NULL;
- void *sm_buf1=NULL;
- void *sm_buf2=NULL;
- hid_t sm_space; /*stripmine data space */
- size_t need; /* bytes needed for malloc */
- int i;
- unsigned int vl_data = 0; /*contains VL datatypes */
-
- h5difftrace("diff_datasetid start\n");
+ hid_t sid1 = H5I_INVALID_HID;
+ hid_t sid2 = H5I_INVALID_HID;
+ hid_t f_tid1 = H5I_INVALID_HID;
+ hid_t f_tid2 = H5I_INVALID_HID;
+ hid_t m_tid1 = H5I_INVALID_HID;
+ hid_t m_tid2 = H5I_INVALID_HID;
+ hid_t dcpl1 = H5I_INVALID_HID;
+ hid_t dcpl2 = H5I_INVALID_HID;
+ H5D_layout_t stl1 = -1;
+ H5D_layout_t stl2 = -1;
+ size_t m_size1;
+ size_t m_size2;
+ H5T_sign_t sign1;
+ H5T_sign_t sign2;
+ int rank1;
+ int rank2;
+ hsize_t nelmts1;
+ hsize_t nelmts2;
+ hsize_t dims1[H5S_MAX_RANK];
+ hsize_t dims2[H5S_MAX_RANK];
+ hsize_t maxdim1[H5S_MAX_RANK];
+ hsize_t maxdim2[H5S_MAX_RANK];
+ hsize_t storage_size1;
+ hsize_t storage_size2;
+ hsize_t nfound = 0; /* number of differences found */
+ int can_compare = 1; /* do diff or not */
+ void *buf1 = NULL;
+ void *buf2 = NULL;
+ void *sm_buf1 = NULL;
+ void *sm_buf2 = NULL;
+ hid_t sm_space1 = H5I_INVALID_HID; /*stripmine data space */
+ hid_t sm_space2 = H5I_INVALID_HID; /*stripmine data space */
+ size_t need; /* bytes needed for malloc */
+ int i, j;
+ unsigned int vl_data1 = 0; /*contains VL datatypes */
+ unsigned int vl_data2 = 0; /*contains VL datatypes */
+ diff_err_t ret_value = opts->err_stat;
+
+ H5TOOLS_START_DEBUG(" - errstat:%d", opts->err_stat);
/* Get the dataspace handle */
- if ( (sid1 = H5Dget_space(did1)) < 0 )
- goto error;
+ if ((sid1 = H5Dget_space(did1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_space failed");
/* Get rank */
- if ( (rank1 = H5Sget_simple_extent_ndims(sid1)) < 0 )
- goto error;
+ if ((rank1 = H5Sget_simple_extent_ndims(sid1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_ndims failed");
/* Get the dataspace handle */
- if ( (sid2 = H5Dget_space(did2)) < 0 )
- goto error;
+ if ((sid2 = H5Dget_space(did2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_space failed");
/* Get rank */
- if ( (rank2 = H5Sget_simple_extent_ndims(sid2)) < 0 )
- goto error;
+ if ((rank2 = H5Sget_simple_extent_ndims(sid2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_ndims failed");
/* Get dimensions */
- if ( H5Sget_simple_extent_dims(sid1,dims1,maxdim1) < 0 )
- goto error;
+ if (H5Sget_simple_extent_dims(sid1, dims1, maxdim1) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims failed");
/* Get dimensions */
- if ( H5Sget_simple_extent_dims(sid2,dims2,maxdim2) < 0 )
- {
- goto error;
- }
+ if (H5Sget_simple_extent_dims(sid2, dims2, maxdim2) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_simple_extent_dims failed");
+ H5TOOLS_DEBUG("rank: %ld - %ld", rank1, rank2);
/*-------------------------------------------------------------------------
- * get the file data type
- *-------------------------------------------------------------------------
- */
+ * get the file data type
+ *-------------------------------------------------------------------------
+ */
/* Get the data type */
- if ( (f_tid1 = H5Dget_type(did1)) < 0 )
- goto error;
+ if ((f_tid1 = H5Dget_type(did1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_type failed");
/* Get the data type */
- if ( (f_tid2 = H5Dget_type(did2)) < 0 )
- {
- goto error;
- }
+ if ((f_tid2 = H5Dget_type(did2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_type failed");
/*-------------------------------------------------------------------------
- * check for empty datasets
- *-------------------------------------------------------------------------
- */
- h5difftrace("check for empty datasets\n");
+ * get the storage layout type
+ *-------------------------------------------------------------------------
+ */
+ if ((dcpl1 = H5Dget_create_plist(did1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist failed");
+ if ((stl1 = H5Pget_layout(dcpl1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Pget_layout failed");
+ H5Pclose(dcpl1);
+
+ if ((dcpl2 = H5Dget_create_plist(did2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dget_create_plist failed");
+ if ((stl2 = H5Pget_layout(dcpl2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Pget_layout failed");
+ H5Pclose(dcpl2);
+
+ /*-------------------------------------------------------------------------
+ * check for empty datasets
+ *-------------------------------------------------------------------------
+ */
+ H5TOOLS_DEBUG("check for empty datasets");
- storage_size1=H5Dget_storage_size(did1);
- storage_size2=H5Dget_storage_size(did2);
+ storage_size1 = H5Dget_storage_size(did1);
+ storage_size2 = H5Dget_storage_size(did2);
+ H5TOOLS_DEBUG("storage size: %ld - %ld", storage_size1, storage_size2);
- if (storage_size1==0 || storage_size2==0)
- {
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- parallel_print("Not comparable: <%s> or <%s> is an empty dataset\n", obj1_name, obj2_name);
- can_compare=0;
- options->not_cmp=1;
+ if (storage_size1 == 0 || storage_size2 == 0) {
+ if (stl1 == H5D_VIRTUAL || stl2 == H5D_VIRTUAL) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && obj1_name && obj2_name)
+ parallel_print("Warning: <%s> or <%s> is a virtual dataset\n", obj1_name, obj2_name);
+ }
+ else {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && obj1_name && obj2_name)
+ parallel_print("Not comparable: <%s> or <%s> is an empty dataset\n", obj1_name, obj2_name);
+ can_compare = 0;
+ opts->not_cmp = 1;
+ }
}
- /*-------------------------------------------------------------------------
- * check for comparable TYPE and SPACE
- *-------------------------------------------------------------------------
- */
-
- if (diff_can_type(f_tid1,
- f_tid2,
- rank1,
- rank2,
- dims1,
- dims2,
- maxdim1,
- maxdim2,
- obj1_name,
- obj2_name,
- options,
- 0)!=1)
- {
- can_compare=0;
+ H5TOOLS_DEBUG("obj_names: %s - %s", obj1_name, obj2_name);
+ opts->obj_name[0] = NULL;
+ if (obj1_name) {
+ j = (int)HDstrlen(obj1_name);
+ H5TOOLS_DEBUG("obj1_name: %s - %d", obj1_name, j);
+ if (j > 0) {
+ opts->obj_name[0] = (char *)HDmalloc((size_t)j + 1);
+ HDstrncpy(opts->obj_name[0], obj1_name, (size_t)j + 1);
+ }
}
+ opts->obj_name[1] = NULL;
+ if (obj2_name) {
+ j = (int)HDstrlen(obj2_name);
+ H5TOOLS_DEBUG("obj2_name: %s - %d", obj2_name, j);
+ if (j > 0) {
+ opts->obj_name[1] = (char *)HDmalloc((size_t)j + 1);
+ HDstrncpy(opts->obj_name[1], obj2_name, (size_t)j + 1);
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * check for comparable TYPE and SPACE
+ *-------------------------------------------------------------------------
+ */
+ if (diff_can_type(f_tid1, f_tid2, rank1, rank2, dims1, dims2, maxdim1, maxdim2, opts, 0) != 1)
+ can_compare = 0;
+ H5TOOLS_DEBUG("diff_can_type returned errstat:%d", opts->err_stat);
+
/*-------------------------------------------------------------------------
- * memory type and sizes
- *-------------------------------------------------------------------------
- */
- h5difftrace("check for memory type and sizes\n");
- if ((m_tid1=h5tools_get_native_type(f_tid1)) < 0)
- goto error;
+ * memory type and sizes
+ *-------------------------------------------------------------------------
+ */
+ H5TOOLS_DEBUG("check for memory type and sizes");
+ if (H5Tget_class(f_tid1) == H5T_REFERENCE) {
+ if ((m_tid1 = H5Tcopy(H5T_STD_REF)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) first ftype failed");
+ }
+ else {
+ if ((m_tid1 = H5Tget_native_type(f_tid1, H5T_DIR_DEFAULT)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type first ftype failed");
+ }
- if ((m_tid2=h5tools_get_native_type(f_tid2)) < 0)
- goto error;
+ if (H5Tget_class(f_tid2) == H5T_REFERENCE) {
+ if ((m_tid2 = H5Tcopy(H5T_STD_REF)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tcopy(H5T_STD_REF) second ftype failed");
+ }
+ else {
+ if ((m_tid2 = H5Tget_native_type(f_tid2, H5T_DIR_DEFAULT)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Tget_native_type second ftype failed");
+ }
- m_size1 = H5Tget_size( m_tid1 );
- m_size2 = H5Tget_size( m_tid2 );
+ m_size1 = H5Tget_size(m_tid1);
+ m_size2 = H5Tget_size(m_tid2);
+ H5TOOLS_DEBUG("type size: %ld - %ld", m_size1, m_size2);
/*-------------------------------------------------------------------------
- * check for different signed/unsigned types
- *-------------------------------------------------------------------------
- */
- if (can_compare)
- {
- h5difftrace("can_compare for sign\n");
- sign1=H5Tget_sign(m_tid1);
- sign2=H5Tget_sign(m_tid2);
- if ( sign1 != sign2 )
- {
- h5difftrace("sign1 != sign2\n");
- if ((options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
+ * check for different signed/unsigned types
+ *-------------------------------------------------------------------------
+ */
+ if (can_compare) {
+ H5TOOLS_DEBUG("can_compare for sign");
+ sign1 = H5Tget_sign(m_tid1);
+ sign2 = H5Tget_sign(m_tid2);
+ if (sign1 != sign2) {
+ H5TOOLS_DEBUG("sign1 != sign2");
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && obj1_name && obj2_name) {
parallel_print("Not comparable: <%s> has sign %s ", obj1_name, get_sign(sign1));
parallel_print("and <%s> has sign %s\n", obj2_name, get_sign(sign2));
}
-
- can_compare=0;
- options->not_cmp=1;
+
+ can_compare = 0;
+ opts->not_cmp = 1;
}
+ H5TOOLS_DEBUG("can_compare for sign - can_compare=%d opts->not_cmp=%d", can_compare, opts->not_cmp);
}
/* Check if type is either VLEN-data or VLEN-string to reclaim any
- * VLEN memory buffer later */
- if( TRUE == h5tools_detect_vlen(m_tid1) )
- vl_data = TRUE;
+ * VLEN memory buffer later
+ */
+ if (TRUE == h5tools_detect_vlen(m_tid1))
+ vl_data1 = TRUE;
+ if (TRUE == h5tools_detect_vlen(m_tid2))
+ vl_data2 = TRUE;
+ H5TOOLS_DEBUG("h5tools_detect_vlen %d:%d - errstat:%d", vl_data1, vl_data2, opts->err_stat);
/*------------------------------------------------------------------------
- * only attempt to compare if possible
- *-------------------------------------------------------------------------
- */
- if(can_compare) /* it is possible to compare */
- {
- h5difftrace("can_compare attempt\n");
+ * only attempt to compare if possible
+ *-------------------------------------------------------------------------
+ */
+ if (can_compare) { /* it is possible to compare */
+ H5T_class_t tclass = H5Tget_class(f_tid1);
+ H5TOOLS_DEBUG("can_compare attempt");
/*-----------------------------------------------------------------
- * get number of elements
- *------------------------------------------------------------------
- */
+ * get number of elements
+ *------------------------------------------------------------------
+ */
nelmts1 = 1;
- for(i = 0; i < rank1; i++)
+ for (i = 0; i < rank1; i++)
nelmts1 *= dims1[i];
nelmts2 = 1;
- for(i = 0; i < rank2; i++)
+ for (i = 0; i < rank2; i++)
nelmts2 *= dims2[i];
- HDassert(nelmts1 == nelmts2);
-
- /*-----------------------------------------------------------------
- * "upgrade" the smaller memory size
- *------------------------------------------------------------------
- */
- h5difftrace("upgrade the smaller memory size?\n");
-
- if (FAIL == match_up_memsize (f_tid1, f_tid2,
- &m_tid1, &m_tid2,
- &m_size1, &m_size2))
- goto error;
+ H5TOOLS_DEBUG("nelmts: %ld - %ld", nelmts1, nelmts2);
+ if (tclass != H5T_ARRAY) {
+ /*-----------------------------------------------------------------
+ * "upgrade" the smaller memory size
+ *------------------------------------------------------------------
+ */
+ H5TOOLS_DEBUG("NOT H5T_ARRAY, upgrade the smaller memory size?");
+ if (FAIL == match_up_memsize(f_tid1, f_tid2, &m_tid1, &m_tid2, &m_size1, &m_size2))
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "match_up_memsize failed");
+ H5TOOLS_DEBUG("m_size: %ld - %ld", m_size1, m_size2);
+ opts->rank = rank1;
+ for (i = 0; i < rank1; i++)
+ opts->dims[i] = dims1[i];
+ opts->m_size = m_size1;
+ opts->m_tid = m_tid1;
+ opts->nelmts = nelmts1;
+ need = (size_t)(nelmts1 * m_size1); /* bytes needed */
+ }
+ else {
+ H5TOOLS_DEBUG("Array dims: %d - %d", dims1[0], dims2[0]);
+ /* Compare the smallest array, but create the largest buffer */
+ if (m_size1 <= m_size2) {
+ opts->rank = rank1;
+ for (i = 0; i < rank1; i++)
+ opts->dims[i] = dims1[i];
+ opts->m_size = m_size1;
+ opts->m_tid = m_tid1;
+ opts->nelmts = nelmts1;
+ need = (size_t)(nelmts2 * m_size2); /* bytes needed */
+ }
+ else {
+ opts->rank = rank2;
+ for (i = 0; i < rank2; i++)
+ opts->dims[i] = dims2[i];
+ opts->m_size = m_size2;
+ opts->m_tid = m_tid2;
+ opts->nelmts = nelmts2;
+ need = (size_t)(nelmts1 * m_size1); /* bytes needed */
+ }
+ }
+ opts->hs_nelmts = opts->nelmts;
+ H5TOOLS_DEBUG("need: %ld", need);
/* print names */
- if(obj1_name)
- name1 = diff_basename(obj1_name);
- if(obj2_name)
- name2 = diff_basename(obj2_name);
-
-
+ H5TOOLS_DEBUG("obj_names: %s - %s", obj1_name, obj2_name);
+
+ if (opts->obj_name[0] != NULL)
+ HDfree(opts->obj_name[0]);
+ opts->obj_name[0] = NULL;
+ if (opts->obj_name[1] != NULL)
+ HDfree(opts->obj_name[1]);
+ opts->obj_name[1] = NULL;
+
+ if (obj1_name)
+ opts->obj_name[0] = HDstrdup(diff_basename(obj1_name));
+ if (obj2_name)
+ opts->obj_name[1] = HDstrdup(diff_basename(obj2_name));
+ H5TOOLS_DEBUG("obj_names: %s - %s", opts->obj_name[0], opts->obj_name[1]);
+
+ H5TOOLS_DEBUG("read/compare");
/*----------------------------------------------------------------
- * read/compare
- *-----------------------------------------------------------------
- */
- need = (size_t)(nelmts1 * m_size1); /* bytes needed */
- if(need < H5TOOLS_MALLOCSIZE) {
+ * read/compare
+ *-----------------------------------------------------------------
+ */
+ if (need < H5TOOLS_MALLOCSIZE) {
buf1 = HDmalloc(need);
buf2 = HDmalloc(need);
} /* end if */
- if(buf1 != NULL && buf2 != NULL) {
- h5difftrace("buf1 != NULL && buf2 != NULL\n");
- if(H5Dread(did1, m_tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1) < 0)
- goto error;
- if(H5Dread(did2, m_tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2) < 0)
- goto error;
+ /* Assume entire data space to be printed */
+ init_acc_pos((unsigned)opts->rank, opts->dims, opts->acc, opts->pos, opts->p_min_idx);
+
+ for (i = 0; i < opts->rank; i++) {
+ opts->p_max_idx[i] = opts->dims[i];
+ }
+
+ if (buf1 != NULL && buf2 != NULL && opts->sset[0] == NULL && opts->sset[1] == NULL) {
+ H5TOOLS_DEBUG("buf1 != NULL && buf2 != NULL");
+ H5TOOLS_DEBUG("H5Dread did1");
+ if (H5Dread(did1, m_tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed");
+ H5TOOLS_DEBUG("H5Dread did2");
+ if (H5Dread(did2, m_tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed");
+
+ /* initialize the current stripmine position; this is necessary to print the array indices */
+ for (j = 0; j < opts->rank; j++)
+ opts->sm_pos[j] = (hsize_t)0;
/* array diff */
- nfound = diff_array(buf1, buf2, nelmts1, (hsize_t)0, rank1, dims1,
- options, name1, name2, m_tid1, did1, did2);
+ nfound = diff_array(buf1, buf2, opts, did1, did2);
+ H5TOOLS_DEBUG("diff_array ret nfound:%d - errstat:%d", nfound, opts->err_stat);
/* reclaim any VL memory, if necessary */
- if(vl_data) {
- H5Dvlen_reclaim(m_tid1, sid1, H5P_DEFAULT, buf1);
- H5Dvlen_reclaim(m_tid2, sid2, H5P_DEFAULT, buf2);
- } /* end if */
- } /* end if */
- else /* possibly not enough memory, read/compare by hyperslabs */
- {
- size_t p_type_nbytes = m_size1; /*size of memory type */
- hsize_t p_nelmts = nelmts1; /*total selected elmts */
- hsize_t elmtno; /*counter */
- int carry; /*counter carry value */
+ H5TOOLS_DEBUG("check vl_data1:%d", vl_data1);
+ if (vl_data1)
+ H5Treclaim(m_tid1, sid1, H5P_DEFAULT, buf1);
+ H5TOOLS_DEBUG("check vl_data2:%d", vl_data2);
+ if (vl_data2)
+ H5Treclaim(m_tid2, sid2, H5P_DEFAULT, buf2);
+ if (buf1 != NULL) {
+ HDfree(buf1);
+ buf1 = NULL;
+ }
+ if (buf2 != NULL) {
+ HDfree(buf2);
+ buf2 = NULL;
+ }
+ } /* end if */
+ else { /* possibly not enough memory, read/compare by hyperslabs */
+ hsize_t elmtno; /* counter */
+ int carry; /* counter carry value */
/* stripmine info */
- hsize_t sm_size[H5S_MAX_RANK]; /*stripmine size */
- hsize_t sm_nbytes; /*bytes per stripmine */
- hsize_t sm_nelmts; /*elements per stripmine*/
+ hsize_t sm_size[H5S_MAX_RANK]; /* stripmine size */
+ hsize_t sm_block[H5S_MAX_RANK]; /* stripmine block size */
+ hsize_t sm_nbytes; /* bytes per stripmine */
+ hsize_t sm_nelmts1; /* elements per stripmine */
+ hsize_t sm_nelmts2; /* elements per stripmine */
+ hssize_t ssm_nelmts; /* elements temp */
/* hyperslab info */
- hsize_t hs_offset[H5S_MAX_RANK]; /*starting offset */
- hsize_t hs_size[H5S_MAX_RANK]; /*size this pass */
- hsize_t hs_nelmts; /*elements in request */
- hsize_t zero[8]; /*vector of zeros */
+ hsize_t hs_offset1[H5S_MAX_RANK]; /* starting offset */
+ hsize_t hs_count1[H5S_MAX_RANK]; /* number of blocks */
+ hsize_t hs_block1[H5S_MAX_RANK]; /* size of blocks */
+ hsize_t hs_stride1[H5S_MAX_RANK]; /* stride */
+ hsize_t hs_size1[H5S_MAX_RANK]; /* size this pass */
+ hsize_t hs_offset2[H5S_MAX_RANK]; /* starting offset */
+ hsize_t hs_count2[H5S_MAX_RANK]; /* number of blocks */
+ hsize_t hs_block2[H5S_MAX_RANK]; /* size of blocks */
+ hsize_t hs_stride2[H5S_MAX_RANK]; /* stride */
+ hsize_t hs_size2[H5S_MAX_RANK]; /* size this pass */
+ hsize_t hs_nelmts1 = 0; /* elements in request */
+ hsize_t hs_nelmts2 = 0; /* elements in request */
+ hsize_t zero[8]; /* vector of zeros */
+ hsize_t low[H5S_MAX_RANK]; /* low bound of hyperslab */
+ hsize_t high[H5S_MAX_RANK]; /* higher bound of hyperslab */
+
+ H5TOOLS_DEBUG("reclaim any VL memory and free unused buffers");
+ if (buf1 != NULL) {
+ /* reclaim any VL memory, if necessary */
+ if (vl_data1)
+ H5Treclaim(m_tid1, sid1, H5P_DEFAULT, buf1);
+ HDfree(buf1);
+ buf1 = NULL;
+ }
+ if (buf2 != NULL) {
+ /* reclaim any VL memory, if necessary */
+ if (vl_data2)
+ H5Treclaim(m_tid2, sid2, H5P_DEFAULT, buf2);
+ HDfree(buf2);
+ buf2 = NULL;
+ }
+
+ /* the stripmine loop */
+ HDmemset(hs_offset1, 0, sizeof hs_offset1);
+ HDmemset(hs_stride1, 0, sizeof hs_stride1);
+ HDmemset(hs_count1, 0, sizeof hs_count1);
+ HDmemset(hs_block1, 0, sizeof hs_block1);
+ HDmemset(hs_size1, 0, sizeof hs_size1);
+ HDmemset(hs_offset2, 0, sizeof hs_offset2);
+ HDmemset(hs_stride2, 0, sizeof hs_stride2);
+ HDmemset(hs_count2, 0, sizeof hs_count2);
+ HDmemset(hs_block2, 0, sizeof hs_block2);
+ HDmemset(hs_size2, 0, sizeof hs_size2);
+ HDmemset(zero, 0, sizeof zero);
+
+ /* if subsetting was requested - initialize the subsetting variables */
+ H5TOOLS_DEBUG("compare by hyperslabs: opts->nelmts=%ld - opts->m_size=%ld", opts->nelmts,
+ opts->m_size);
+ if (opts->sset[0] != NULL) {
+ H5TOOLS_DEBUG("opts->sset[0] != NULL");
+
+ /* Check for valid settings - default if not specified */
+ if (!opts->sset[0]->start.data || !opts->sset[0]->stride.data || !opts->sset[0]->count.data ||
+ !opts->sset[0]->block.data) {
+ /* they didn't specify a ``stride'' or ``block''. default to 1 in all
+ * dimensions */
+ if (!opts->sset[0]->start.data) {
+ /* default to (0, 0, ...) for the start coord */
+ opts->sset[0]->start.data = (hsize_t *)HDcalloc((size_t)rank1, sizeof(hsize_t));
+ opts->sset[0]->start.len = (unsigned)rank1;
+ }
+
+ if (!opts->sset[0]->stride.data) {
+ opts->sset[0]->stride.data = (hsize_t *)HDcalloc((size_t)rank1, sizeof(hsize_t));
+ opts->sset[0]->stride.len = (unsigned)rank1;
+ for (i = 0; i < rank1; i++)
+ opts->sset[0]->stride.data[i] = 1;
+ }
+
+ if (!opts->sset[0]->count.data) {
+ opts->sset[0]->count.data = (hsize_t *)HDcalloc((size_t)rank1, sizeof(hsize_t));
+ opts->sset[0]->count.len = (unsigned)rank1;
+ for (i = 0; i < rank1; i++)
+ opts->sset[0]->count.data[i] = 1;
+ }
+
+ if (!opts->sset[0]->block.data) {
+ opts->sset[0]->block.data = (hsize_t *)HDcalloc((size_t)rank1, sizeof(hsize_t));
+ opts->sset[0]->block.len = (unsigned)rank1;
+ for (i = 0; i < rank1; i++)
+ opts->sset[0]->block.data[i] = 1;
+ }
+
+ /*-------------------------------------------------------------------------
+ * check for block overlap
+ *-------------------------------------------------------------------------
+ */
+ for (i = 0; i < rank1; i++) {
+ if (opts->sset[0]->count.data[i] > 1) {
+ if (opts->sset[0]->stride.data[i] < opts->sset[0]->block.data[i]) {
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "wrong subset selection[0]; blocks overlap");
+ } /* end if */
+ } /* end if */
+ } /* end for */
+ }
+
+ /* Reset the total number of elements to the subset from the command */
+ opts->nelmts = 1;
+ for (i = 0; i < rank1; i++) {
+ hs_offset1[i] = opts->sset[0]->start.data[i];
+ hs_stride1[i] = opts->sset[0]->stride.data[i];
+ hs_count1[i] = opts->sset[0]->count.data[i];
+ hs_block1[i] = opts->sset[0]->block.data[i];
+ opts->nelmts *= hs_count1[i] * hs_block1[i];
+ hs_size1[i] = 0;
+ H5TOOLS_DEBUG("[%d]hs_offset1:%ld, hs_stride1:%ld, hs_count1:%ld, hs_block1:%ld", i,
+ hs_offset1[i], hs_stride1[i], hs_count1[i], hs_block1[i]);
+ }
+ }
+ if (opts->sset[1] != NULL) {
+ H5TOOLS_DEBUG("opts->sset[1] != NULL");
+
+ /* Check for valid settings - default if not specified */
+ if (!opts->sset[1]->start.data || !opts->sset[1]->stride.data || !opts->sset[1]->count.data ||
+ !opts->sset[1]->block.data) {
+ /* they didn't specify a ``stride'' or ``block''. default to 1 in all
+ * dimensions */
+ if (!opts->sset[1]->start.data) {
+ /* default to (0, 0, ...) for the start coord */
+ opts->sset[1]->start.data = (hsize_t *)HDcalloc((size_t)rank2, sizeof(hsize_t));
+ opts->sset[1]->start.len = (unsigned)rank2;
+ }
+
+ if (!opts->sset[1]->stride.data) {
+ opts->sset[1]->stride.data = (hsize_t *)HDcalloc((size_t)rank2, sizeof(hsize_t));
+ opts->sset[1]->stride.len = (unsigned)rank2;
+ for (i = 0; i < rank2; i++)
+ opts->sset[1]->stride.data[i] = 1;
+ }
+
+ if (!opts->sset[1]->count.data) {
+ opts->sset[1]->count.data = (hsize_t *)HDcalloc((size_t)rank2, sizeof(hsize_t));
+ opts->sset[1]->count.len = (unsigned)rank2;
+ for (i = 0; i < rank2; i++)
+ opts->sset[1]->count.data[i] = 1;
+ }
+
+ if (!opts->sset[1]->block.data) {
+ opts->sset[1]->block.data = (hsize_t *)HDcalloc((size_t)rank2, sizeof(hsize_t));
+ opts->sset[1]->block.len = (unsigned)rank2;
+ for (i = 0; i < rank2; i++)
+ opts->sset[1]->block.data[i] = 1;
+ }
+
+ /*-------------------------------------------------------------------------
+ * check for block overlap
+ *-------------------------------------------------------------------------
+ */
+ for (i = 0; i < rank2; i++) {
+ if (opts->sset[1]->count.data[i] > 1) {
+ if (opts->sset[1]->stride.data[i] < opts->sset[1]->block.data[i]) {
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "wrong subset selection[1]; blocks overlap");
+ } /* end if */
+ } /* end if */
+ } /* end for */
+ }
+
+ for (i = 0; i < rank2; i++) {
+ hs_offset2[i] = opts->sset[1]->start.data[i];
+ hs_stride2[i] = opts->sset[1]->stride.data[i];
+ hs_count2[i] = opts->sset[1]->count.data[i];
+ hs_block2[i] = opts->sset[1]->block.data[i];
+ hs_size2[i] = 0;
+ H5TOOLS_DEBUG("[%d]hs_offset2:%ld, hs_stride2:%ld, hs_count2:%ld, hs_block2:%ld", i,
+ hs_offset2[i], hs_stride2[i], hs_count2[i], hs_block2[i]);
+ }
+ }
/*
* determine the strip mine size and allocate a buffer. The strip mine is
* a hyperslab whose size is manageable.
*/
- sm_nbytes = p_type_nbytes;
-
- for(i = rank1; i > 0; --i) {
- hsize_t size = H5TOOLS_BUFSIZE / sm_nbytes;
-
- if(size == 0) /* datum size > H5TOOLS_BUFSIZE */
- size = 1;
- sm_size[i - 1] = MIN(dims1[i - 1], size);
- sm_nbytes *= sm_size[i - 1];
- HDassert(sm_nbytes > 0);
- } /* end for */
-
- /* malloc return code should be verified.
- * If fail, need to handle the error.
- * This else branch should be recoded as a separate function.
- * Note that there are many "goto error" within this branch
- * that fails to address freeing other objects created here.
- * E.g., sm_space.
- */
- sm_buf1 = HDmalloc((size_t)sm_nbytes);
- HDassert(sm_buf1);
- sm_buf2 = HDmalloc((size_t)sm_nbytes);
- HDassert(sm_buf2);
+ sm_nbytes = opts->m_size;
+ if (opts->rank > 0) {
+ for (i = opts->rank; i > 0; --i) {
+ hsize_t size = H5TOOLS_BUFSIZE / sm_nbytes;
+ if (size == 0) /* datum size > H5TOOLS_BUFSIZE */
+ size = 1;
+ H5TOOLS_DEBUG("opts->dims[%d]: %ld - size: %ld", i - 1, opts->dims[i - 1], size);
+ if (opts->sset[1] != NULL) {
+ sm_size[i - 1] = MIN(hs_block1[i - 1] * hs_count1[i - 1], size);
+ sm_block[i - 1] = MIN(hs_block1[i - 1], sm_size[i - 1]);
+ }
+ else {
+ sm_size[i - 1] = MIN(opts->dims[i - 1], size);
+ sm_block[i - 1] = sm_size[i - 1];
+ }
+ H5TOOLS_DEBUG("sm_size[%d]: %ld - sm_block:%ld", i - 1, sm_size[i - 1], sm_block[i - 1]);
+ sm_nbytes *= sm_size[i - 1];
+ H5TOOLS_DEBUG("sm_nbytes: %ld", sm_nbytes);
+ }
+ }
- sm_nelmts = sm_nbytes / p_type_nbytes;
- sm_space = H5Screate_simple(1, &sm_nelmts, NULL);
+ H5TOOLS_DEBUG("opts->nelmts: %ld", opts->nelmts);
+ for (elmtno = 0; elmtno < opts->nelmts; elmtno += opts->hs_nelmts) {
+ H5TOOLS_DEBUG("elmtno: %ld - hs_nelmts1: %ld", elmtno, hs_nelmts1);
- /* the stripmine loop */
- HDmemset(hs_offset, 0, sizeof hs_offset);
- HDmemset(zero, 0, sizeof zero);
+ if (NULL == (sm_buf1 = (unsigned char *)HDmalloc((size_t)sm_nbytes)))
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Could not allocate buffer for strip-mine");
+ if (NULL == (sm_buf2 = (unsigned char *)HDmalloc((size_t)sm_nbytes)))
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "Could not allocate buffer for strip-mine");
- for(elmtno = 0; elmtno < p_nelmts; elmtno += hs_nelmts) {
/* calculate the hyperslab size */
- if(rank1 > 0) {
- for(i = 0, hs_nelmts = 1; i < rank1; i++) {
- hs_size[i] = MIN(dims1[i] - hs_offset[i], sm_size[i]);
- hs_nelmts *= hs_size[i];
- } /* end for */
- if(H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0)
- goto error;
- if(H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset, NULL, hs_size, NULL) < 0)
- goto error;
- if(H5Sselect_hyperslab(sm_space, H5S_SELECT_SET, zero, NULL, &hs_nelmts, NULL) < 0)
- goto error;
- } /* end if */
+ /* initialize subset */
+ if (opts->rank > 0) {
+ if (opts->sset[0] != NULL) {
+ H5TOOLS_DEBUG("sset1 has data");
+ /* calculate the potential number of elements */
+ for (i = 0; i < rank1; i++) {
+ H5TOOLS_DEBUG("[%d]opts->dims: %ld - hs_offset1: %ld - sm_block: %ld", i,
+ opts->dims[i], hs_offset1[i], sm_block[i]);
+ hs_size1[i] = MIN(opts->dims[i] - hs_offset1[i], sm_block[i]);
+ H5TOOLS_DEBUG("hs_size1[%d]: %ld", i, hs_size1[i]);
+ }
+ if (H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset1, hs_stride1, hs_count1,
+ hs_size1) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab sid1 failed");
+ }
+ else {
+ for (i = 0, hs_nelmts1 = 1; i < rank1; i++) {
+ H5TOOLS_DEBUG("[%d]opts->dims: %ld - hs_offset1: %ld - sm_block: %ld", i,
+ opts->dims[i], hs_offset1[i], sm_block[i]);
+ hs_size1[i] = MIN(opts->dims[i] - hs_offset1[i], sm_block[i]);
+ H5TOOLS_DEBUG("hs_size1[%d]: %ld", i, hs_size1[i]);
+ hs_nelmts1 *= hs_size1[i];
+ H5TOOLS_DEBUG("hs_nelmts1:%ld *= hs_size1[%d]: %ld", hs_nelmts1, i, hs_size1[i]);
+ }
+ if (H5Sselect_hyperslab(sid1, H5S_SELECT_SET, hs_offset1, NULL, hs_size1, NULL) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab sid1 failed");
+ }
+
+ if ((ssm_nelmts = H5Sget_select_npoints(sid1)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_select_npoints failed");
+ sm_nelmts1 = (hsize_t)ssm_nelmts;
+ H5TOOLS_DEBUG("sm_nelmts1: %ld", sm_nelmts1);
+ hs_nelmts1 = sm_nelmts1;
+
+ if ((sm_space1 = H5Screate_simple(1, &sm_nelmts1, NULL)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Screate_simple failed");
+
+ if (H5Sselect_hyperslab(sm_space1, H5S_SELECT_SET, zero, NULL, &sm_nelmts1, NULL) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab failed");
+
+ if (opts->sset[1] != NULL) {
+ H5TOOLS_DEBUG("sset2 has data");
+ for (i = 0; i < rank2; i++) {
+ H5TOOLS_DEBUG("[%d]opts->dims: %ld - hs_offset2: %ld - sm_block: %ld", i,
+ opts->dims[i], hs_offset2[i], sm_block[i]);
+ hs_size2[i] = MIN(opts->dims[i] - hs_offset2[i], sm_block[i]);
+ H5TOOLS_DEBUG("hs_size2[%d]: %ld", i, hs_size2[i]);
+ }
+ if (H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset2, hs_stride2, hs_count2,
+ hs_size2) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab sid2 failed");
+ }
+ else {
+ for (i = 0, hs_nelmts2 = 1; i < rank2; i++) {
+ H5TOOLS_DEBUG("[%d]opts->dims: %ld - hs_offset2: %ld - sm_block: %ld", i,
+ opts->dims[i], hs_offset2[i], sm_block[i]);
+ hs_size2[i] = MIN(opts->dims[i] - hs_offset2[i], sm_block[i]);
+ H5TOOLS_DEBUG("hs_size2[%d]: %ld", i, hs_size2[i]);
+ hs_nelmts2 *= hs_size2[i];
+ H5TOOLS_DEBUG("hs_nelmts2:%ld *= hs_size2[%d]: %ld", hs_nelmts2, i, hs_size2[i]);
+ }
+ if (H5Sselect_hyperslab(sid2, H5S_SELECT_SET, hs_offset2, NULL, hs_size2, NULL) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab sid2 failed");
+ }
+
+ if ((ssm_nelmts = H5Sget_select_npoints(sid2)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_select_npoints failed");
+ sm_nelmts2 = (hsize_t)ssm_nelmts;
+ H5TOOLS_DEBUG("sm_nelmts2: %ld", sm_nelmts2);
+ hs_nelmts2 = sm_nelmts2;
+
+ if ((sm_space2 = H5Screate_simple(1, &sm_nelmts2, NULL)) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Screate_simple failed");
+
+ if (H5Sselect_hyperslab(sm_space2, H5S_SELECT_SET, zero, NULL, &sm_nelmts2, NULL) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sselect_hyperslab failed");
+ }
else
- hs_nelmts = 1;
-
- if(H5Dread(did1,m_tid1,sm_space,sid1,H5P_DEFAULT,sm_buf1) < 0)
- goto error;
- if(H5Dread(did2,m_tid2,sm_space,sid2,H5P_DEFAULT,sm_buf2) < 0)
- goto error;
+ hs_nelmts1 = 1;
+ opts->hs_nelmts = hs_nelmts1;
+ H5TOOLS_DEBUG("hs_nelmts: %ld", opts->hs_nelmts);
+
+ /* read the data */
+ if (H5Dread(did1, m_tid1, sm_space1, sid1, H5P_DEFAULT, sm_buf1) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed");
+ if (H5Dread(did2, m_tid2, sm_space2, sid2, H5P_DEFAULT, sm_buf2) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Dread failed");
+
+ /* print array indices. get the lower bound of the hyperslab and calculate
+ the element position at the start of hyperslab */
+ if (H5Sget_select_bounds(sid1, low, high) < 0)
+ H5TOOLS_GOTO_ERROR(H5DIFF_ERR, "H5Sget_select_bounds failed");
+ /* initialize the current stripmine position; this is necessary to print the array indices */
+ for (j = 0; j < opts->rank; j++)
+ opts->sm_pos[j] = low[j];
+
+ /* Assume entire data space to be printed */
+ init_acc_pos((unsigned)opts->rank, opts->dims, opts->acc, opts->pos, opts->p_min_idx);
/* get array differences. in the case of hyperslab read, increment the number of differences
- found in each hyperslab and pass the position at the beggining for printing */
- nfound += diff_array(sm_buf1, sm_buf2, hs_nelmts, elmtno, rank1,
- dims1, options, name1, name2, m_tid1, did1, did2);
-
- /* reclaim any VL memory, if necessary */
- if(vl_data) {
- H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf1);
- H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf2);
- } /* end if */
+ found in each hyperslab and pass the position at the beginning for printing */
+ nfound += diff_array(sm_buf1, sm_buf2, opts, did1, did2);
+
+ if (sm_buf1 != NULL) {
+ /* reclaim any VL memory, if necessary */
+ if (vl_data1)
+ H5Treclaim(m_tid1, sm_space1, H5P_DEFAULT, sm_buf1);
+ HDfree(sm_buf1);
+ sm_buf1 = NULL;
+ }
+ if (sm_buf2 != NULL) {
+ /* reclaim any VL memory, if necessary */
+ if (vl_data2)
+ H5Treclaim(m_tid2, sm_space2, H5P_DEFAULT, sm_buf2);
+ HDfree(sm_buf2);
+ sm_buf2 = NULL;
+ }
+
+ H5Sclose(sm_space1);
+ H5Sclose(sm_space2);
/* calculate the next hyperslab offset */
- for(i = rank1, carry = 1; i > 0 && carry; --i) {
- hs_offset[i - 1] += hs_size[i - 1];
- if(hs_offset[i - 1] == dims1[i - 1])
- hs_offset[i - 1] = 0;
+ for (i = opts->rank, carry = 1; i > 0 && carry; --i) {
+ if (opts->sset[0] != NULL) {
+ H5TOOLS_DEBUG("[%d]hs_size1:%ld - hs_block1:%ld - hs_stride1:%ld", i - 1,
+ hs_size1[i - 1], hs_block1[i - 1], hs_stride1[i - 1]);
+ if (hs_size1[i - 1] >= hs_block1[i - 1]) {
+ hs_offset1[i - 1] += hs_size1[i - 1];
+ }
+ else {
+ hs_offset1[i - 1] += hs_stride1[i - 1];
+ }
+ }
+ else
+ hs_offset1[i - 1] += hs_size1[i - 1];
+ H5TOOLS_DEBUG("[%d]hs_offset1:%ld - opts->dims:%ld", i - 1, hs_offset1[i - 1],
+ opts->dims[i - 1]);
+ if (hs_offset1[i - 1] >= opts->dims[i - 1])
+ hs_offset1[i - 1] = 0;
else
carry = 0;
- } /* i */
- } /* elmtno */
-
- H5Sclose(sm_space);
- } /* hyperslab read */
+ H5TOOLS_DEBUG("[%d]hs_offset1:%ld", i - 1, hs_offset1[i - 1]);
+ if (opts->sset[1] != NULL) {
+ H5TOOLS_DEBUG("[%d]hs_size2:%ld - hs_block2:%ld - hs_stride2:%ld", i - 1,
+ hs_size2[i - 1], hs_block2[i - 1], hs_stride2[i - 1]);
+ if (hs_size2[i - 1] >= hs_block2[i - 1]) {
+ hs_offset2[i - 1] += hs_size2[i - 1];
+ }
+ else {
+ hs_offset2[i - 1] += hs_stride2[i - 1];
+ }
+ }
+ else
+ hs_offset2[i - 1] += hs_size2[i - 1];
+ H5TOOLS_DEBUG("[%d]hs_offset2:%ld - opts->dims:%ld", i - 1, hs_offset2[i - 1],
+ opts->dims[i - 1]);
+ if (hs_offset2[i - 1] >= opts->dims[i - 1])
+ hs_offset2[i - 1] = 0;
+ H5TOOLS_DEBUG("[%d]hs_offset2:%ld", i - 1, hs_offset2[i - 1]);
+ }
+ } /* elmtno for loop */
+ } /* hyperslab read */
+ H5TOOLS_DEBUG("can compare complete");
} /*can_compare*/
-
/*-------------------------------------------------------------------------
* close
*-------------------------------------------------------------------------
*/
- h5difftrace("compare attributes?\n");
- /* free */
- if(buf1 != NULL) {
- HDfree(buf1);
- buf1 = NULL;
- } /* end if */
- if(buf2 != NULL) {
- HDfree(buf2);
- buf2 = NULL;
- } /* end if */
- if(sm_buf1 != NULL) {
- HDfree(sm_buf1);
- sm_buf1 = NULL;
- } /* end if */
- if(sm_buf2 != NULL) {
- HDfree(sm_buf2);
- sm_buf2 = NULL;
- } /* end if */
-
- H5E_BEGIN_TRY {
- H5Sclose(sid1);
- H5Sclose(sid2);
- H5Tclose(f_tid1);
- H5Tclose(f_tid2);
- H5Tclose(m_tid1);
- H5Tclose(m_tid2);
- } H5E_END_TRY;
- h5difftrace("diff_datasetid finish\n");
-
- return nfound;
-
-error:
- options->err_stat=1;
+done:
+ opts->err_stat = opts->err_stat | ret_value;
+ H5TOOLS_DEBUG("free names - errstat:%d", opts->err_stat);
/* free */
- if (buf1!=NULL)
- {
+ if (opts->obj_name[0] != NULL)
+ HDfree(opts->obj_name[0]);
+ opts->obj_name[0] = NULL;
+ if (opts->obj_name[1] != NULL)
+ HDfree(opts->obj_name[1]);
+ opts->obj_name[1] = NULL;
+
+ H5TOOLS_DEBUG("reclaim any VL memory");
+ if (buf1 != NULL) {
/* reclaim any VL memory, if necessary */
- if(vl_data)
- H5Dvlen_reclaim(m_tid1, sid1, H5P_DEFAULT, buf1);
+ if (vl_data1)
+ H5Treclaim(m_tid1, sid1, H5P_DEFAULT, buf1);
HDfree(buf1);
- buf1=NULL;
+ buf1 = NULL;
}
- if (buf2!=NULL)
- {
+ if (buf2 != NULL) {
/* reclaim any VL memory, if necessary */
- if(vl_data)
- H5Dvlen_reclaim(m_tid2, sid2, H5P_DEFAULT, buf2);
+ if (vl_data2)
+ H5Treclaim(m_tid2, sid2, H5P_DEFAULT, buf2);
HDfree(buf2);
- buf2=NULL;
+ buf2 = NULL;
}
- if (sm_buf1!=NULL)
- {
+ H5TOOLS_DEBUG("reclaim any stripmine VL memory");
+ if (sm_buf1 != NULL) {
/* reclaim any VL memory, if necessary */
- if(vl_data)
- H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf1);
+ if (vl_data1)
+ H5Treclaim(m_tid1, sm_space1, H5P_DEFAULT, sm_buf1);
HDfree(sm_buf1);
- sm_buf1=NULL;
+ sm_buf1 = NULL;
}
- if (sm_buf2!=NULL)
- {
+ if (sm_buf2 != NULL) {
/* reclaim any VL memory, if necessary */
- if(vl_data)
- H5Dvlen_reclaim(m_tid1, sm_space, H5P_DEFAULT, sm_buf2);
+ if (vl_data2)
+ H5Treclaim(m_tid2, sm_space2, H5P_DEFAULT, sm_buf2);
HDfree(sm_buf2);
- sm_buf2=NULL;
+ sm_buf2 = NULL;
}
+ H5TOOLS_DEBUG("close ids");
/* disable error reporting */
- H5E_BEGIN_TRY {
+ H5E_BEGIN_TRY
+ {
H5Sclose(sid1);
H5Sclose(sid2);
+ H5Sclose(sm_space1);
+ H5Sclose(sm_space2);
+ H5Pclose(dcpl1);
+ H5Pclose(dcpl2);
H5Tclose(f_tid1);
H5Tclose(f_tid2);
H5Tclose(m_tid1);
H5Tclose(m_tid2);
/* enable error reporting */
- } H5E_END_TRY;
- h5difftrace("diff_datasetid errored\n");
+ }
+ H5E_END_TRY;
+ H5TOOLS_ENDDEBUG(": %d with nfound:%d", ret_value, nfound);
return nfound;
}
/*-------------------------------------------------------------------------
-* Function: diff_can_type
-*
-* Purpose: check for comparable TYPE and SPACE
-*
-* Return:
-* 1, can compare
-* 0, cannot compare
-* -1, error
-*
-* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
-*
-* Date: November 3, 2003
-*
-*-------------------------------------------------------------------------
-*/
-
-int diff_can_type( hid_t f_tid1, /* file data type */
- hid_t f_tid2, /* file data type */
- int rank1,
- int rank2,
- hsize_t *dims1,
- hsize_t *dims2,
- hsize_t *maxdim1,
- hsize_t *maxdim2,
- const char *obj1_name,
- const char *obj2_name,
- diff_opt_t *options,
- int is_compound)
+ * Function: diff_can_type
+ *
+ * Purpose: check for comparable TYPE and SPACE
+ *
+ * Return:
+ * 1, can compare
+ * 0, cannot compare
+ * -1, error
+ *-------------------------------------------------------------------------
+ */
+
+int
+diff_can_type(hid_t f_tid1, hid_t f_tid2, int rank1, int rank2, hsize_t *dims1, hsize_t *dims2,
+ hsize_t *maxdim1, hsize_t *maxdim2, diff_opt_t *opts, int is_compound)
{
-
-
- H5T_class_t tclass1;
- H5T_class_t tclass2;
- int maxdim_diff=0; /* maximum dimensions are different */
- int dim_diff=0; /* current dimensions are different */
- int i;
- int can_compare = 1; /* return value */
-
+ H5T_class_t tclass1;
+ H5T_class_t tclass2;
+ int maxdim_diff = 0; /* maximum dimensions are different */
+ int dim_diff = 0; /* current dimensions are different */
+ int i;
+ int ret_value = 1;
+
+ H5TOOLS_START_DEBUG(" ");
/*-------------------------------------------------------------------------
- * check for the same class
- *-------------------------------------------------------------------------
- */
-
- if ((tclass1=H5Tget_class(f_tid1)) < 0)
- return -1;
-
- if ((tclass2=H5Tget_class(f_tid2)) < 0)
- return -1;
-
- if ( tclass1 != tclass2 )
- {
-
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
-
- if ( is_compound )
- {
-
+ * check for the same class
+ *-------------------------------------------------------------------------
+ */
+ if ((tclass1 = H5Tget_class(f_tid1)) < 0)
+ H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_class first object failed");
+ if ((tclass2 = H5Tget_class(f_tid2)) < 0)
+ H5TOOLS_GOTO_ERROR(FAIL, "H5Tget_class second object failed");
+
+ H5TOOLS_DEBUG("obj_names: %s - %s", opts->obj_name[0], opts->obj_name[1]);
+ if (tclass1 != tclass2) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1]) {
+ if (is_compound) {
parallel_print("Not comparable: <%s> has a class %s and <%s> has a class %s\n",
- obj1_name, get_class(tclass1),
- obj2_name, get_class(tclass2) );
-
+ opts->obj_name[0], get_class(tclass1), opts->obj_name[1], get_class(tclass2));
}
-
- else
-
- {
-
+ else {
parallel_print("Not comparable: <%s> is of class %s and <%s> is of class %s\n",
- obj1_name, get_class(tclass1),
- obj2_name, get_class(tclass2) );
-
+ opts->obj_name[0], get_class(tclass1), opts->obj_name[1], get_class(tclass2));
}
-
}
-
- can_compare = 0;
- options->not_cmp = 1;
- return can_compare;
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
}
/*-------------------------------------------------------------------------
- * check for non supported classes
- *-------------------------------------------------------------------------
- */
+ * check for non supported classes
+ *-------------------------------------------------------------------------
+ */
+ switch (tclass1) {
+ case H5T_TIME:
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1]) {
+ parallel_print("Not comparable: <%s> and <%s> are of class %s\n", opts->obj_name[0],
+ opts->obj_name[1], get_class(tclass2));
+ } /* end if */
- HDassert(tclass1==tclass2);
- switch (tclass1)
- {
- case H5T_INTEGER:
- case H5T_FLOAT:
- case H5T_COMPOUND:
- case H5T_STRING:
- case H5T_ARRAY:
- case H5T_BITFIELD:
- case H5T_OPAQUE:
- case H5T_ENUM:
- case H5T_VLEN:
- case H5T_REFERENCE:
-
- break;
-
- default: /*H5T_TIME */
-
-
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
- parallel_print("Not comparable: <%s> and <%s> are of class %s\n",
- obj1_name,obj2_name,get_class(tclass2) );
- }
- can_compare = 0;
- options->not_cmp = 1;
- return can_compare;
- }
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
+ break;
+
+ case H5T_INTEGER:
+ case H5T_FLOAT:
+ case H5T_COMPOUND:
+ case H5T_STRING:
+ case H5T_ARRAY:
+ case H5T_BITFIELD:
+ case H5T_OPAQUE:
+ case H5T_ENUM:
+ case H5T_VLEN:
+ case H5T_REFERENCE:
+ case H5T_NO_CLASS:
+ case H5T_NCLASSES:
+ default:
+ H5TOOLS_DEBUG("class - %s", get_class(tclass1));
+ break;
+ } /* end switch */
/*-------------------------------------------------------------------------
- * check for equal file datatype; warning only
- *-------------------------------------------------------------------------
- */
-
- if ( (H5Tequal(f_tid1, f_tid2)==0) &&
- (options->m_verbose) && obj1_name && obj2_name)
- {
-
+ * check for equal file datatype; warning only
+ *-------------------------------------------------------------------------
+ */
+ if ((H5Tequal(f_tid1, f_tid2) == 0) && (opts->mode_verbose) && opts->obj_name[0] && opts->obj_name[1]) {
H5T_class_t cl = H5Tget_class(f_tid1);
-
parallel_print("Warning: different storage datatype\n");
- if ( cl == H5T_INTEGER || cl == H5T_FLOAT )
- {
- parallel_print("<%s> has file datatype ", obj1_name);
+ if (cl == H5T_INTEGER || cl == H5T_FLOAT) {
+ parallel_print("<%s> has file datatype ", opts->obj_name[0]);
print_type(f_tid1);
parallel_print("\n");
- parallel_print("<%s> has file datatype ", obj2_name);
+ parallel_print("<%s> has file datatype ", opts->obj_name[1]);
print_type(f_tid2);
parallel_print("\n");
}
-
-
-
}
/*-------------------------------------------------------------------------
- * check for the same rank
- *-------------------------------------------------------------------------
- */
-
-
- if ( rank1 != rank2 )
- {
-
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
- parallel_print("Not comparable: <%s> has rank %d, dimensions ", obj1_name, rank1);
- print_dimensions(rank1,dims1);
+ * check for the same rank
+ *-------------------------------------------------------------------------
+ */
+ if (rank1 != rank2) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1]) {
+ parallel_print("Not comparable: <%s> has rank %d, dimensions ", opts->obj_name[0], rank1);
+ print_dimensions(rank1, dims1);
parallel_print(", max dimensions ");
- print_dimensions(rank1,maxdim1);
- parallel_print("\n" );
- parallel_print("and <%s> has rank %d, dimensions ", obj2_name, rank2);
- print_dimensions(rank2,dims2);
+ print_dimensions(rank1, maxdim1);
+ parallel_print("\n");
+ parallel_print("and <%s> has rank %d, dimensions ", opts->obj_name[1], rank2);
+ print_dimensions(rank2, dims2);
parallel_print(", max dimensions ");
- print_dimensions(rank2,maxdim2);
+ print_dimensions(rank2, maxdim2);
parallel_print("\n");
}
- can_compare = 0;
- options->not_cmp = 1;
- return can_compare;
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
}
/*-------------------------------------------------------------------------
- * check for different dimensions
- *-------------------------------------------------------------------------
- */
-
- HDassert(rank1==rank2);
- for ( i=0; i<rank1; i++)
- {
- if (maxdim1 && maxdim2)
- {
- if ( maxdim1[i] != maxdim2[i] )
- maxdim_diff=1;
+ * check for different dimensions
+ *-------------------------------------------------------------------------
+ */
+ for (i = 0; i < rank1; i++) {
+ if (maxdim1 && maxdim2) {
+ if (maxdim1[i] != maxdim2[i])
+ maxdim_diff = 1;
}
- if ( dims1[i] != dims2[i] )
- dim_diff=1;
+ if (dims1[i] != dims2[i])
+ dim_diff = 1;
}
/*-------------------------------------------------------------------------
- * current dimensions
- *-------------------------------------------------------------------------
- */
-
- if (dim_diff==1)
- {
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
- parallel_print("Not comparable: <%s> has rank %d, dimensions ", obj1_name, rank1);
- print_dimensions(rank1,dims1);
- if (maxdim1 && maxdim2)
- {
+ * current dimensions
+ *-------------------------------------------------------------------------
+ */
+ if (dim_diff == 1) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1]) {
+ parallel_print("Not comparable: <%s> has rank %d, dimensions ", opts->obj_name[0], rank1);
+ print_dimensions(rank1, dims1);
+ if (maxdim1 && maxdim2) {
parallel_print(", max dimensions ");
- print_dimensions(rank1,maxdim1);
- parallel_print("\n" );
- parallel_print("and <%s> has rank %d, dimensions ", obj2_name, rank2);
- print_dimensions(rank2,dims2);
+ print_dimensions(rank1, maxdim1);
+ parallel_print("\n");
+ parallel_print("and <%s> has rank %d, dimensions ", opts->obj_name[1], rank2);
+ print_dimensions(rank2, dims2);
parallel_print(", max dimensions ");
- print_dimensions(rank2,maxdim2);
+ print_dimensions(rank2, maxdim2);
parallel_print("\n");
}
}
-
- can_compare = 0;
- options->not_cmp = 1;
- return can_compare;
-
-
-
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
}
/*-------------------------------------------------------------------------
- * maximum dimensions; just give a warning
- *-------------------------------------------------------------------------
- */
- if (maxdim1 && maxdim2 && maxdim_diff==1 && obj1_name )
- {
- if (options->m_verbose) {
- parallel_print( "Warning: different maximum dimensions\n");
- parallel_print("<%s> has max dimensions ", obj1_name);
- print_dimensions(rank1,maxdim1);
+ * maximum dimensions; just give a warning
+ *-------------------------------------------------------------------------
+ */
+ if (maxdim1 && maxdim2 && maxdim_diff == 1 && opts->obj_name[0]) {
+ if (opts->mode_verbose) {
+ parallel_print("Warning: different maximum dimensions\n");
+ parallel_print("<%s> has max dimensions ", opts->obj_name[0]);
+ print_dimensions(rank1, maxdim1);
parallel_print("\n");
- parallel_print("<%s> has max dimensions ", obj2_name);
- print_dimensions(rank2,maxdim2);
+ parallel_print("<%s> has max dimensions ", opts->obj_name[1]);
+ print_dimensions(rank2, maxdim2);
parallel_print("\n");
}
}
+ if (tclass1 == H5T_STRING) {
+ htri_t vstrtype1 = -1;
+ htri_t vstrtype2 = -1;
+ H5TOOLS_DEBUG(" - H5T_STRING");
- if ( tclass1 == H5T_COMPOUND )
- {
+ vstrtype1 = H5Tis_variable_str(f_tid1);
+ vstrtype2 = H5Tis_variable_str(f_tid2);
+
+ /* no compare if either one but not both are variable string type */
+ if (vstrtype1 != vstrtype2) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1])
+ parallel_print("Not comparable: <%s> or <%s> is of mixed string type\n", opts->obj_name[0],
+ opts->obj_name[1]);
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
+ }
+ }
+
+ if (tclass1 == H5T_COMPOUND) {
int nmembs1;
int nmembs2;
int j;
- hid_t memb_type1;
- hid_t memb_type2;
+ hid_t memb_type1 = H5I_INVALID_HID;
+ hid_t memb_type2 = H5I_INVALID_HID;
+ H5TOOLS_DEBUG(" - H5T_COMPOUND");
nmembs1 = H5Tget_nmembers(f_tid1);
nmembs2 = H5Tget_nmembers(f_tid2);
- if ( nmembs1 != nmembs2 )
- {
-
- if ( (options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
- {
- parallel_print("Not comparable: <%s> has %d members ", obj1_name, nmembs1);
- parallel_print("<%s> has %d members ", obj2_name, nmembs2);
+ if (nmembs1 != nmembs2) {
+ if ((opts->mode_verbose || opts->mode_list_not_cmp) && opts->obj_name[0] && opts->obj_name[1]) {
+ parallel_print("Not comparable: <%s> has %d members ", opts->obj_name[0], nmembs1);
+ parallel_print("<%s> has %d members ", opts->obj_name[1], nmembs2);
parallel_print("\n");
}
- can_compare = 0;
- options->not_cmp = 1;
- return can_compare;
+ opts->not_cmp = 1;
+ H5TOOLS_GOTO_DONE(0);
}
- for (j = 0; j < nmembs1; j++)
- {
+ for (j = 0; j < nmembs1; j++) {
memb_type1 = H5Tget_member_type(f_tid1, (unsigned)j);
memb_type2 = H5Tget_member_type(f_tid2, (unsigned)j);
- if (diff_can_type(memb_type1,
- memb_type2,
- rank1,
- rank2,
- dims1,
- dims2,
- maxdim1,
- maxdim2,
- obj1_name,
- obj2_name,
- options,
- 1)!=1)
- {
- can_compare = 0;
- options->not_cmp = 1;
+ if (diff_can_type(memb_type1, memb_type2, rank1, rank2, dims1, dims2, maxdim1, maxdim2, opts,
+ 1) != 1) {
+ opts->not_cmp = 1;
H5Tclose(memb_type1);
H5Tclose(memb_type2);
- return can_compare;
+ H5TOOLS_GOTO_DONE(0);
}
-
H5Tclose(memb_type1);
H5Tclose(memb_type2);
-
}
-
-
-
-
-
}
+done:
+ if (ret_value < 0)
+ opts->err_stat = H5DIFF_ERR;
-
-
-
-
- return can_compare;
+ H5TOOLS_ENDDEBUG(" - %d", ret_value);
+ return ret_value;
}
-
-
-
+#if defined(H5DIFF_DEBUG_UNUSED)
+/* this function is not currently used, but could be useful */
/*-------------------------------------------------------------------------
-* Function: print_sizes
-*
-* Purpose: Print datatype sizes
-*
-*-------------------------------------------------------------------------
-*/
-#if defined (H5DIFF_DEBUG)
-void print_sizes( const char *obj1,
- const char *obj2,
- hid_t f_tid1,
- hid_t f_tid2,
- hid_t m_tid1,
- hid_t m_tid2 )
+ * Function: print_sizes
+ *
+ * Purpose: Print datatype sizes
+ *-------------------------------------------------------------------------
+ */
+void print_sizes(const char *obj1, const char *obj2, hid_t f_tid1, hid_t f_tid2, hid_t m_tid1, hid_t m_tid2);
+
+void
+print_sizes(const char *obj1, const char *obj2, hid_t f_tid1, hid_t f_tid2, hid_t m_tid1, hid_t m_tid2)
{
- size_t f_size1, f_size2; /* size of type in file */
- size_t m_size1, m_size2; /* size of type in memory */
+ size_t f_size1, f_size2; /* size of type in file */
+ size_t m_size1, m_size2; /* size of type in memory */
- f_size1 = H5Tget_size( f_tid1 );
- f_size2 = H5Tget_size( f_tid2 );
- m_size1 = H5Tget_size( m_tid1 );
- m_size2 = H5Tget_size( m_tid2 );
+ f_size1 = H5Tget_size(f_tid1);
+ f_size2 = H5Tget_size(f_tid2);
+ m_size1 = H5Tget_size(m_tid1);
+ m_size2 = H5Tget_size(m_tid2);
parallel_print("\n");
parallel_print("------------------\n");
- parallel_print("sizeof(char) %u\n", sizeof(char) );
- parallel_print("sizeof(short) %u\n", sizeof(short) );
- parallel_print("sizeof(int) %u\n", sizeof(int) );
- parallel_print("sizeof(long) %u\n", sizeof(long) );
+ parallel_print("sizeof(char) %u\n", sizeof(char));
+ parallel_print("sizeof(short) %u\n", sizeof(short));
+ parallel_print("sizeof(int) %u\n", sizeof(int));
+ parallel_print("sizeof(long) %u\n", sizeof(long));
parallel_print("<%s> ------------------\n", obj1);
parallel_print("type on file ");
print_type(f_tid1);
parallel_print("\n");
- parallel_print("size on file %u\n", f_size1 );
+ parallel_print("size on file %u\n", f_size1);
parallel_print("type on memory ");
print_type(m_tid1);
parallel_print("\n");
- parallel_print("size on memory %u\n", m_size1 );
+ parallel_print("size on memory %u\n", m_size1);
parallel_print("<%s> ------------------\n", obj2);
parallel_print("type on file ");
print_type(f_tid2);
parallel_print("\n");
- parallel_print("size on file %u\n", f_size2 );
+ parallel_print("size on file %u\n", f_size2);
parallel_print("type on memory ");
print_type(m_tid2);
parallel_print("\n");
- parallel_print("size on memory %u\n", m_size2 );
+ parallel_print("size on memory %u\n", m_size2);
parallel_print("\n");
}
#endif /* H5DIFF_DEBUG */