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-rw-r--r--tools/lib/CMakeLists.txt1
-rw-r--r--tools/lib/Makefile.in186
-rw-r--r--tools/lib/h5diff.c337
-rw-r--r--tools/lib/h5diff.h31
-rw-r--r--tools/lib/h5diff_array.c45
-rw-r--r--tools/lib/h5diff_attr.c8
-rw-r--r--tools/lib/h5diff_dset.c35
-rw-r--r--tools/lib/h5diff_util.c42
-rw-r--r--tools/lib/h5tools.c251
-rw-r--r--tools/lib/h5tools_utils.c2
-rw-r--r--tools/lib/h5tools_utils.h2
-rw-r--r--tools/lib/h5trav.c25
-rw-r--r--tools/lib/h5trav.h2
13 files changed, 398 insertions, 569 deletions
diff --git a/tools/lib/CMakeLists.txt b/tools/lib/CMakeLists.txt
index 6d48d5f..21420ce 100644
--- a/tools/lib/CMakeLists.txt
+++ b/tools/lib/CMakeLists.txt
@@ -40,6 +40,7 @@ H5_SET_LIB_OPTIONS (
HDF5_TOOLS_LIB_NAME_RELEASE
HDF5_TOOLS_LIB_NAME_DEBUG
)
+#SET_TARGET_PROPERTIES (hdf5_tools PROPERTIES COMPILE_DEFINITIONS H5DIFF_DEBUG)
SET_TARGET_PROPERTIES (hdf5_tools PROPERTIES FOLDER libraries/tools)
##############################################################################
diff --git a/tools/lib/Makefile.in b/tools/lib/Makefile.in
index beeb42f..6a76e1d 100644
--- a/tools/lib/Makefile.in
+++ b/tools/lib/Makefile.in
@@ -1,9 +1,8 @@
-# Makefile.in generated by automake 1.11.1 from Makefile.am.
+# Makefile.in generated by automake 1.12.3 from Makefile.am.
# @configure_input@
-# Copyright (C) 1994, 1995, 1996, 1997, 1998, 1999, 2000, 2001, 2002,
-# 2003, 2004, 2005, 2006, 2007, 2008, 2009 Free Software Foundation,
-# Inc.
+# Copyright (C) 1994-2012 Free Software Foundation, Inc.
+
# This Makefile.in is free software; the Free Software Foundation
# gives unlimited permission to copy and/or distribute it,
# with or without modifications, as long as this notice is preserved.
@@ -33,6 +32,23 @@
#
VPATH = @srcdir@
+am__make_dryrun = \
+ { \
+ am__dry=no; \
+ case $$MAKEFLAGS in \
+ *\\[\ \ ]*) \
+ echo 'am--echo: ; @echo "AM" OK' | $(MAKE) -f - 2>/dev/null \
+ | grep '^AM OK$$' >/dev/null || am__dry=yes;; \
+ *) \
+ for am__flg in $$MAKEFLAGS; do \
+ case $$am__flg in \
+ *=*|--*) ;; \
+ *n*) am__dry=yes; break;; \
+ esac; \
+ done;; \
+ esac; \
+ test $$am__dry = yes; \
+ }
pkgdatadir = $(datadir)/@PACKAGE@
pkgincludedir = $(includedir)/@PACKAGE@
pkglibdir = $(libdir)/@PACKAGE@
@@ -52,13 +68,14 @@ POST_UNINSTALL = :
build_triplet = @build@
host_triplet = @host@
DIST_COMMON = $(srcdir)/Makefile.am $(srcdir)/Makefile.in \
+ $(top_srcdir)/bin/depcomp $(top_srcdir)/bin/mkinstalldirs \
$(top_srcdir)/config/commence.am \
$(top_srcdir)/config/conclude.am
check_PROGRAMS = $(am__EXEEXT_1)
-TESTS = $(check_PROGRAMS)
+TESTS = $(am__EXEEXT_1)
subdir = tools/lib
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
-am__aclocal_m4_deps = $(top_srcdir)/configure.in
+am__aclocal_m4_deps = $(top_srcdir)/configure.ac
am__configure_deps = $(am__aclocal_m4_deps) $(CONFIGURE_DEPENDENCIES) \
$(ACLOCAL_M4)
mkinstalldirs = $(SHELL) $(top_srcdir)/bin/mkinstalldirs
@@ -72,10 +89,23 @@ am_libh5tools_la_OBJECTS = h5tools.lo h5tools_dump.lo h5tools_str.lo \
h5diff_dset.lo h5diff_util.lo h5trav.lo h5tools_filters.lo \
h5tools_ref.lo h5tools_type.lo
libh5tools_la_OBJECTS = $(am_libh5tools_la_OBJECTS)
-AM_V_lt = $(am__v_lt_$(V))
-am__v_lt_ = $(am__v_lt_$(AM_DEFAULT_VERBOSITY))
+AM_V_lt = $(am__v_lt_@AM_V@)
+am__v_lt_ = $(am__v_lt_@AM_DEFAULT_V@)
am__v_lt_0 = --silent
+am__v_lt_1 =
am__EXEEXT_1 =
+AM_V_P = $(am__v_P_@AM_V@)
+am__v_P_ = $(am__v_P_@AM_DEFAULT_V@)
+am__v_P_0 = false
+am__v_P_1 = :
+AM_V_GEN = $(am__v_GEN_@AM_V@)
+am__v_GEN_ = $(am__v_GEN_@AM_DEFAULT_V@)
+am__v_GEN_0 = @echo " GEN " $@;
+am__v_GEN_1 =
+AM_V_at = $(am__v_at_@AM_V@)
+am__v_at_ = $(am__v_at_@AM_DEFAULT_V@)
+am__v_at_0 = @
+am__v_at_1 =
DEFAULT_INCLUDES = -I.@am__isrc@ -I$(top_builddir)/src
depcomp = $(SHELL) $(top_srcdir)/bin/depcomp
am__depfiles_maybe = depfiles
@@ -86,30 +116,33 @@ LTCOMPILE = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
$(LIBTOOLFLAGS) --mode=compile $(CC) $(DEFS) \
$(DEFAULT_INCLUDES) $(INCLUDES) $(AM_CPPFLAGS) $(CPPFLAGS) \
$(AM_CFLAGS) $(CFLAGS)
-AM_V_CC = $(am__v_CC_$(V))
-am__v_CC_ = $(am__v_CC_$(AM_DEFAULT_VERBOSITY))
-am__v_CC_0 = @echo " CC " $@;
-AM_V_at = $(am__v_at_$(V))
-am__v_at_ = $(am__v_at_$(AM_DEFAULT_VERBOSITY))
-am__v_at_0 = @
+AM_V_CC = $(am__v_CC_@AM_V@)
+am__v_CC_ = $(am__v_CC_@AM_DEFAULT_V@)
+am__v_CC_0 = @echo " CC " $@;
+am__v_CC_1 =
CCLD = $(CC)
LINK = $(LIBTOOL) $(AM_V_lt) --tag=CC $(AM_LIBTOOLFLAGS) \
$(LIBTOOLFLAGS) --mode=link $(CCLD) $(AM_CFLAGS) $(CFLAGS) \
$(AM_LDFLAGS) $(LDFLAGS) -o $@
-AM_V_CCLD = $(am__v_CCLD_$(V))
-am__v_CCLD_ = $(am__v_CCLD_$(AM_DEFAULT_VERBOSITY))
-am__v_CCLD_0 = @echo " CCLD " $@;
-AM_V_GEN = $(am__v_GEN_$(V))
-am__v_GEN_ = $(am__v_GEN_$(AM_DEFAULT_VERBOSITY))
-am__v_GEN_0 = @echo " GEN " $@;
+AM_V_CCLD = $(am__v_CCLD_@AM_V@)
+am__v_CCLD_ = $(am__v_CCLD_@AM_DEFAULT_V@)
+am__v_CCLD_0 = @echo " CCLD " $@;
+am__v_CCLD_1 =
SOURCES = $(libh5tools_la_SOURCES)
DIST_SOURCES = $(libh5tools_la_SOURCES)
+am__can_run_installinfo = \
+ case $$AM_UPDATE_INFO_DIR in \
+ n|no|NO) false;; \
+ *) (install-info --version) >/dev/null 2>&1;; \
+ esac
ETAGS = etags
CTAGS = ctags
-am__tty_colors = \
-red=; grn=; lgn=; blu=; std=
+am__tty_colors_dummy = \
+ mgn= red= grn= lgn= blu= brg= std=; \
+ am__color_tests=no
+am__tty_colors = $(am__tty_colors_dummy)
DISTFILES = $(DIST_COMMON) $(DIST_SOURCES) $(TEXINFOS) $(EXTRA_DIST)
-ACLOCAL = /home1/packages/automake/automake-1.9.6/bin/aclocal-1.9 -I /afs/ncsa/projects/hdf/packages/libtool_1.5.14/Linux_2.4/share/aclocal
+ACLOCAL = @ACLOCAL@
ADD_PARALLEL_FILES = @ADD_PARALLEL_FILES@
AMTAR = @AMTAR@
@@ -127,12 +160,9 @@ AM_LDFLAGS = @AM_LDFLAGS@ @H5_LDFLAGS@
AM_MAKEFLAGS = @AM_MAKEFLAGS@
AR = @AR@
AS = @AS@
-
-# Set the paths for AFS installs of autotools for Linux machines
-# Ideally, these tools should never be needed during the build.
-AUTOCONF = /home1/packages/autoconf/autoconf-2.60/bin/autoconf
-AUTOHEADER = /home1/packages/autoconf/autoconf-2.60/bin/autoheader
-AUTOMAKE = /home1/packages/automake/automake-1.9.6/bin/automake-1.9
+AUTOCONF = @AUTOCONF@
+AUTOHEADER = @AUTOHEADER@
+AUTOMAKE = @AUTOMAKE@
AWK = @AWK@
BYTESEX = @BYTESEX@
CC = @CC@
@@ -419,6 +449,10 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \
PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \
$(EXTRA_PROG)
+chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST)
+TEST_EXTENSIONS = .sh
+SH_LOG_COMPILER = $(SHELL)
+AM_SH_LOG_FLAGS =
TEST_PROG_CHKEXE = $(TEST_PROG:=.chkexe_)
TEST_PROG_PARA_CHKEXE = $(TEST_PROG_PARA:=.chkexe_)
TEST_SCRIPT_CHKSH = $(TEST_SCRIPT:=.chkexe_)
@@ -448,6 +482,7 @@ Makefile: $(srcdir)/Makefile.in $(top_builddir)/config.status
echo ' cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe)'; \
cd $(top_builddir) && $(SHELL) ./config.status $(subdir)/$@ $(am__depfiles_maybe);; \
esac;
+$(top_srcdir)/config/commence.am $(top_srcdir)/config/conclude.am:
$(top_builddir)/config.status: $(top_srcdir)/configure $(CONFIG_STATUS_DEPENDENCIES)
cd $(top_builddir) && $(MAKE) $(AM_MAKEFLAGS) am--refresh
@@ -460,13 +495,15 @@ $(am__aclocal_m4_deps):
clean-noinstLTLIBRARIES:
-test -z "$(noinst_LTLIBRARIES)" || rm -f $(noinst_LTLIBRARIES)
- @list='$(noinst_LTLIBRARIES)'; for p in $$list; do \
- dir="`echo $$p | sed -e 's|/[^/]*$$||'`"; \
- test "$$dir" != "$$p" || dir=.; \
- echo "rm -f \"$${dir}/so_locations\""; \
- rm -f "$${dir}/so_locations"; \
- done
-libh5tools.la: $(libh5tools_la_OBJECTS) $(libh5tools_la_DEPENDENCIES)
+ @list='$(noinst_LTLIBRARIES)'; \
+ locs=`for p in $$list; do echo $$p; done | \
+ sed 's|^[^/]*$$|.|; s|/[^/]*$$||; s|$$|/so_locations|' | \
+ sort -u`; \
+ test -z "$$locs" || { \
+ echo rm -f $${locs}; \
+ rm -f $${locs}; \
+ }
+libh5tools.la: $(libh5tools_la_OBJECTS) $(libh5tools_la_DEPENDENCIES) $(EXTRA_libh5tools_la_DEPENDENCIES)
$(AM_V_CCLD)$(LINK) $(libh5tools_la_OBJECTS) $(libh5tools_la_LIBADD) $(LIBS)
clean-checkPROGRAMS:
@@ -501,26 +538,23 @@ distclean-compile:
.c.o:
@am__fastdepCC_TRUE@ $(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
@am__fastdepCC_TRUE@ $(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
-@am__fastdepCC_FALSE@ $(AM_V_CC) @AM_BACKSLASH@
-@AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@ $(AM_V_CC)source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@ DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-@am__fastdepCC_FALSE@ $(COMPILE) -c $<
+@am__fastdepCC_FALSE@ $(AM_V_CC@am__nodep@)$(COMPILE) -c $<
.c.obj:
@am__fastdepCC_TRUE@ $(AM_V_CC)$(COMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ `$(CYGPATH_W) '$<'`
@am__fastdepCC_TRUE@ $(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Po
-@am__fastdepCC_FALSE@ $(AM_V_CC) @AM_BACKSLASH@
-@AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@ $(AM_V_CC)source='$<' object='$@' libtool=no @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@ DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-@am__fastdepCC_FALSE@ $(COMPILE) -c `$(CYGPATH_W) '$<'`
+@am__fastdepCC_FALSE@ $(AM_V_CC@am__nodep@)$(COMPILE) -c `$(CYGPATH_W) '$<'`
.c.lo:
@am__fastdepCC_TRUE@ $(AM_V_CC)$(LTCOMPILE) -MT $@ -MD -MP -MF $(DEPDIR)/$*.Tpo -c -o $@ $<
@am__fastdepCC_TRUE@ $(AM_V_at)$(am__mv) $(DEPDIR)/$*.Tpo $(DEPDIR)/$*.Plo
-@am__fastdepCC_FALSE@ $(AM_V_CC) @AM_BACKSLASH@
-@AMDEP_TRUE@@am__fastdepCC_FALSE@ source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
+@AMDEP_TRUE@@am__fastdepCC_FALSE@ $(AM_V_CC)source='$<' object='$@' libtool=yes @AMDEPBACKSLASH@
@AMDEP_TRUE@@am__fastdepCC_FALSE@ DEPDIR=$(DEPDIR) $(CCDEPMODE) $(depcomp) @AMDEPBACKSLASH@
-@am__fastdepCC_FALSE@ $(LTCOMPILE) -c -o $@ $<
+@am__fastdepCC_FALSE@ $(AM_V_CC@am__nodep@)$(LTCOMPILE) -c -o $@ $<
mostlyclean-libtool:
-rm -f *.lo
@@ -577,6 +611,20 @@ GTAGS:
&& $(am__cd) $(top_srcdir) \
&& gtags -i $(GTAGS_ARGS) "$$here"
+cscopelist: $(HEADERS) $(SOURCES) $(LISP)
+ list='$(SOURCES) $(HEADERS) $(LISP)'; \
+ case "$(srcdir)" in \
+ [\\/]* | ?:[\\/]*) sdir="$(srcdir)" ;; \
+ *) sdir=$(subdir)/$(srcdir) ;; \
+ esac; \
+ for i in $$list; do \
+ if test -f "$$i"; then \
+ echo "$(subdir)/$$i"; \
+ else \
+ echo "$$sdir/$$i"; \
+ fi; \
+ done >> $(top_builddir)/cscope.files
+
distclean-tags:
-rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags
@@ -626,10 +674,15 @@ install-am: all-am
installcheck: installcheck-am
install-strip:
- $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
- install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
- `test -z '$(STRIP)' || \
- echo "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'"` install
+ if test -z '$(STRIP)'; then \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ install; \
+ else \
+ $(MAKE) $(AM_MAKEFLAGS) INSTALL_PROGRAM="$(INSTALL_STRIP_PROGRAM)" \
+ install_sh_PROGRAM="$(INSTALL_STRIP_PROGRAM)" INSTALL_STRIP_FLAG=-s \
+ "INSTALL_PROGRAM_ENV=STRIPPROG='$(STRIP)'" install; \
+ fi
mostlyclean-generic:
clean-generic:
@@ -716,17 +769,18 @@ uninstall-am:
.PHONY: CTAGS GTAGS all all-am all-local check check-TESTS check-am \
clean clean-checkPROGRAMS clean-generic clean-libtool \
- clean-noinstLTLIBRARIES ctags distclean distclean-compile \
- distclean-generic distclean-libtool distclean-tags distdir dvi \
- dvi-am html html-am info info-am install install-am \
- install-data install-data-am install-dvi install-dvi-am \
- install-exec install-exec-am install-html install-html-am \
- install-info install-info-am install-man install-pdf \
- install-pdf-am install-ps install-ps-am install-strip \
- installcheck installcheck-am installdirs maintainer-clean \
- maintainer-clean-generic mostlyclean mostlyclean-compile \
- mostlyclean-generic mostlyclean-libtool mostlyclean-local pdf \
- pdf-am ps ps-am tags uninstall uninstall-am
+ clean-noinstLTLIBRARIES cscopelist ctags distclean \
+ distclean-compile distclean-generic distclean-libtool \
+ distclean-tags distdir dvi dvi-am html html-am info info-am \
+ install install-am install-data install-data-am install-dvi \
+ install-dvi-am install-exec install-exec-am install-html \
+ install-html-am install-info install-info-am install-man \
+ install-pdf install-pdf-am install-ps install-ps-am \
+ install-strip installcheck installcheck-am installdirs \
+ maintainer-clean maintainer-clean-generic mostlyclean \
+ mostlyclean-compile mostlyclean-generic mostlyclean-libtool \
+ mostlyclean-local pdf pdf-am ps ps-am tags uninstall \
+ uninstall-am
# List all build rules defined by HDF5 Makefiles as "PHONY" targets here.
@@ -744,7 +798,7 @@ help:
# build files in this directory.
build-lib: $(LIB)
build-progs: $(LIB) $(PROGS)
-build-tests: $(LIB) $(PROGS) $(TESTS)
+build-tests: $(LIB) $(PROGS) $(chk_TESTS)
# General rule for recursive building targets.
# BUILT_SOURCES contain targets that need to be built before anything else
@@ -770,7 +824,7 @@ check-clean ::
# Tell Automake to build tests when the user types `make all' (this is
# not its default behavior). Also build EXTRA_LIB and EXTRA_PROG since
# Automake won't build them automatically, either.
-all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(TESTS)
+all-local: $(EXTRA_LIB) $(EXTRA_PROG) $(chk_TESTS)
# make install-doc doesn't do anything outside of doc directory, but
# Makefiles should recognize it.
@@ -794,7 +848,7 @@ check-install: installcheck
# Set HDF5_Make_Ignore to a non-blank string to ignore errors inside the loop.
# The timestamps give a rough idea how much time the tests use.
#
-# Note that targets in TESTS (defined above) will be built when the user
+# Note that targets in chk_TESTS (defined above) will be built when the user
# types 'make tests' or 'make check', but only programs in TEST_PROG,
# TEST_PROG_PARA, or TEST_SCRIPT will actually be executed.
check-TESTS: test
@@ -804,7 +858,7 @@ test _test:
@$(MAKE) build-check-p
# Actual execution of check-s.
-build-check-s: $(LIB) $(PROGS) $(TESTS)
+build-check-s: $(LIB) $(PROGS) $(chk_TESTS)
@if test -n "$(TEST_PROG)$(TEST_SCRIPT)"; then \
echo "===Serial tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
fi
@@ -894,7 +948,7 @@ $(TEST_SCRIPT_CHKSH) $(TEST_SCRIPT_PARA_CHKSH) dummysh.chkexe_:
fi
# Actual execution of check-p.
-build-check-p: $(LIB) $(PROGS) $(TESTS)
+build-check-p: $(LIB) $(PROGS) $(chk_TESTS)
@if test -n "$(TEST_PROG_PARA)$(TEST_SCRIPT_PARA)"; then \
echo "===Parallel tests in `echo ${PWD} | sed -e s:.*/::` begin `date`==="; \
fi
@@ -924,7 +978,7 @@ build-check-p: $(LIB) $(PROGS) $(TESTS)
fi
# Run test with different Virtual File Driver
-check-vfd: $(LIB) $(PROGS) $(TESTS)
+check-vfd: $(LIB) $(PROGS) $(chk_TESTS)
@for vfd in $(VFD_LIST) dummy; do \
if test $$vfd != dummy; then \
echo "============================"; \
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c
index bcd63f1..f2eb3ab 100644
--- a/tools/lib/h5diff.c
+++ b/tools/lib/h5diff.c
@@ -21,23 +21,6 @@
#include "h5diff.h"
#include "ph5diff.h"
-/*
- * Debug printf macros. The prefix allows output filtering by test scripts.
- */
-#ifdef H5DIFF_DEBUG
-#define h5diffdebug(x) HDfprintf(stderr, "h5diff debug: " x)
-#define h5diffdebug2(x1, x2) HDfprintf(stderr, "h5diff debug: " x1, x2)
-#define h5diffdebug3(x1, x2, x3) HDfprintf(stderr, "h5diff debug: " x1, x2, x3)
-#define h5diffdebug4(x1, x2, x3, x4) HDfprintf(stderr, "h5diff debug: " x1, x2, x3, x4)
-#define h5diffdebug5(x1, x2, x3, x4, x5) HDfprintf(stderr, "h5diff debug: " x1, x2, x3, x4, x5)
-#else
-#define h5diffdebug(x)
-#define h5diffdebug2(x1, x2)
-#define h5diffdebug3(x1, x2, x3)
-#define h5diffdebug4(x1, x2, x3, x4)
-#define h5diffdebug5(x1, x2, x3, x4, x5)
-#endif
-
/*-------------------------------------------------------------------------
* Function: print_objname
@@ -369,6 +352,7 @@ static void build_match_list (const char *objname1, trav_info_t *info1, const ch
trav_table_t *table;
size_t idx;
+ h5difftrace("build_match_list start\n");
/* init */
trav_table_init( &table );
@@ -378,6 +362,7 @@ static void build_match_list (const char *objname1, trav_info_t *info1, const ch
* All the objects belong to given groups are the cadidates.
* So prepare to compare paths without the group names.
*/
+
/* if obj1 is not root */
if (HDstrcmp (objname1,"/") != 0)
path1_offset = HDstrlen(objname1);
@@ -390,7 +375,6 @@ static void build_match_list (const char *objname1, trav_info_t *info1, const ch
*/
while(curr1 < info1->nused && curr2 < info2->nused)
{
-
path1_lp = (info1->paths[curr1].path) + path1_offset;
path2_lp = (info2->paths[curr2].path) + path2_offset;
type1_l = info1->paths[curr1].type;
@@ -399,7 +383,8 @@ static void build_match_list (const char *objname1, trav_info_t *info1, const ch
/* criteria is string compare */
cmp = HDstrcmp(path1_lp, path2_lp);
- if(cmp == 0) {
+ if(cmp == 0)
+ {
if(!is_exclude_path(path1_lp, type1_l, options))
{
infile[0] = 1;
@@ -470,29 +455,9 @@ static void build_match_list (const char *objname1, trav_info_t *info1, const ch
} /* end while */
free_exclude_path_list (options);
- /*------------------------------------------------------
- * print the list
- */
- if(options->m_verbose)
- {
- parallel_print("\n");
- /* if given objects is group under root */
- if (HDstrcmp (objname1,"/") || HDstrcmp (objname2,"/"))
- parallel_print("group1 group2\n");
- else
- parallel_print("file1 file2\n");
- parallel_print("---------------------------------------\n");
- for(i = 0; i < table->nobjs; i++)
- {
- char c1, c2;
- c1 = (table->objs[i].flags[0]) ? 'x' : ' ';
- c2 = (table->objs[i].flags[1]) ? 'x' : ' ';
- parallel_print("%5c %6c %-15s\n", c1, c2, table->objs[i].name);
- } /* end for */
- parallel_print ("\n");
- } /* end if */
*table_out = table;
+ h5difftrace("build_match_list finish\n");
}
@@ -653,6 +618,7 @@ hsize_t h5diff(const char *fname1,
int l_ret2 = -1;
const char * obj1fullname = NULL;
const char * obj2fullname = NULL;
+ int both_objs_grp = 0;
/* init to group type */
h5trav_type_t obj1type = H5TRAV_TYPE_GROUP;
h5trav_type_t obj2type = H5TRAV_TYPE_GROUP;
@@ -675,6 +641,7 @@ hsize_t h5diff(const char *fname1,
/* list for common objects */
trav_table_t *match_list = NULL;
+ h5difftrace("h5diff start\n");
/* init filenames */
HDmemset(filenames, 0, MAX_FILENAME * 2);
/* init link info struct */
@@ -723,6 +690,7 @@ hsize_t h5diff(const char *fname1,
trav_info_init(fname1, file1_id, &info1_obj);
trav_info_init(fname2, file2_id, &info2_obj);
+ h5difftrace("trav_info_init initialized\n");
/* if any object is specified */
if (objname1)
{
@@ -751,6 +719,7 @@ hsize_t h5diff(const char *fname1,
/*----------------------------------------------------------
* check if obj1 is root, group, single object or symlink
*/
+ h5difftrace("h5diff check if obj1 is root, group, single object or symlink\n");
if(!HDstrcmp((char *)obj1fullname, "/"))
{
obj1type = H5TRAV_TYPE_GROUP;
@@ -778,6 +747,7 @@ hsize_t h5diff(const char *fname1,
*/
if(src_linfo1.type == H5L_TYPE_HARD)
{
+ int idx = 0;
/* optional data pass */
info1_obj->opts = (diff_opt_t*)options;
@@ -789,6 +759,9 @@ hsize_t h5diff(const char *fname1,
}
obj1type = oinfo1.type;
trav_info_add(info1_obj, obj1fullname, obj1type);
+ idx = info1_obj->nused - 1;
+ info1_obj->paths[idx].objno = oinfo1.addr;
+ info1_obj->paths[idx].fileno = oinfo1.fileno;
}
else if (src_linfo1.type == H5L_TYPE_SOFT)
{
@@ -805,6 +778,7 @@ hsize_t h5diff(const char *fname1,
/*----------------------------------------------------------
* check if obj2 is root, group, single object or symlink
*/
+ h5difftrace("h5diff check if obj2 is root, group, single object or symlink\n");
if(!HDstrcmp(obj2fullname, "/"))
{
obj2type = H5TRAV_TYPE_GROUP;
@@ -832,6 +806,7 @@ hsize_t h5diff(const char *fname1,
*/
if(src_linfo2.type == H5L_TYPE_HARD)
{
+ int idx = 0;
/* optional data pass */
info2_obj->opts = (diff_opt_t*)options;
@@ -843,6 +818,9 @@ hsize_t h5diff(const char *fname1,
}
obj2type = oinfo2.type;
trav_info_add(info2_obj, obj2fullname, obj2type);
+ idx = info2_obj->nused - 1;
+ info2_obj->paths[idx].objno = oinfo2.addr;
+ info2_obj->paths[idx].fileno = oinfo2.fileno;
}
else if (src_linfo2.type == H5L_TYPE_SOFT)
{
@@ -859,11 +837,14 @@ hsize_t h5diff(const char *fname1,
/* if no object specified */
else
{
+ h5difftrace("h5diff no object specified\n");
/* set root group */
obj1fullname = (char*)HDcalloc(2, sizeof(char));
HDstrcat((char *)obj1fullname, "/");
+ obj1type = H5TRAV_TYPE_GROUP;
obj2fullname = (char*)HDcalloc(2, sizeof(char));
HDstrcat((char *)obj2fullname, "/");
+ obj2type = H5TRAV_TYPE_GROUP;
}
@@ -883,9 +864,11 @@ hsize_t h5diff(const char *fname1,
/*-------------------------------
* check symbolic link (object1)
*/
+ h5difftrace("h5diff check symbolic link (object1)\n");
/* dangling link */
if (l_ret1 == 0)
{
+ h5difftrace("h5diff ... dangling link\n");
if (options->no_dangle_links)
{
/* treat dangling link is error */
@@ -913,15 +896,27 @@ hsize_t h5diff(const char *fname1,
goto out;
}
else if(l_ret1 != 2) /* symbolic link */
+ {
obj1type = trg_linfo1.trg_type;
+ h5difftrace("h5diff ... ... trg_linfo1.trg_type == H5L_TYPE_HARD\n");
+ if (info1_lp != NULL) {
+ int idx = info1_lp->nused - 1;
+ h5difftrace("h5diff ... ... ... info1_obj not null\n");
+ info1_lp->paths[idx].type = trg_linfo1.trg_type;
+ info1_lp->paths[idx].objno = trg_linfo1.objno;
+ info1_lp->paths[idx].fileno = trg_linfo1.fileno;
+ }
+ h5difftrace("h5diff check symbolic link (object1) finished\n");
+ }
/*-------------------------------
* check symbolic link (object2)
*/
-
+ h5difftrace("h5diff check symbolic link (object2)\n");
/* dangling link */
if (l_ret2 == 0)
{
+ h5difftrace("h5diff ... dangling link\n");
if (options->no_dangle_links)
{
/* treat dangling link is error */
@@ -949,11 +944,21 @@ hsize_t h5diff(const char *fname1,
goto out;
}
else if(l_ret2 != 2) /* symbolic link */
+ {
obj2type = trg_linfo2.trg_type;
+ if (info2_lp != NULL) {
+ int idx = info2_lp->nused - 1;
+ h5difftrace("h5diff ... ... ... info2_obj not null\n");
+ info2_lp->paths[idx].type = trg_linfo2.trg_type;
+ info2_lp->paths[idx].objno = trg_linfo2.objno;
+ info2_lp->paths[idx].fileno = trg_linfo2.fileno;
+ }
+ h5difftrace("h5diff check symbolic link (object1) finished\n");
+ }
} /* end of if follow symlinks */
/*
- * If verbose options is not used, don't need to traverse thorugh the list
+ * If verbose options is not used, don't need to traverse through the list
* of objects in the group to display objects information,
* So use h5tools_is_obj_same() to improve performance by skipping
* comparing details of same objects.
@@ -961,26 +966,26 @@ hsize_t h5diff(const char *fname1,
if(!(options->m_verbose || options->m_report))
{
+ h5difftrace("h5diff NOT (options->m_verbose || options->m_report)\n");
/* if no danglink links */
if ( l_ret1 > 0 && l_ret2 > 0 )
- if (h5tools_is_obj_same(file1_id,obj1fullname,file2_id,obj2fullname)!=0)
+ if (h5tools_is_obj_same(file1_id, obj1fullname, file2_id, obj2fullname)!=0)
goto out;
}
-
- /* if both obj1 and obj2 are group */
- if (obj1type == H5TRAV_TYPE_GROUP && obj2type == H5TRAV_TYPE_GROUP)
+ both_objs_grp = (obj1type == H5TRAV_TYPE_GROUP && obj2type == H5TRAV_TYPE_GROUP);
+ if (both_objs_grp)
{
-
- /*
- * traverse group1
+ h5difftrace("h5diff both_objs_grp TRUE\n");
+ /*
+ * traverse group1
*/
trav_info_init(fname1, file1_id, &info1_grp);
/* optional data pass */
info1_grp->opts = (diff_opt_t*)options;
- if(h5trav_visit(file1_id,obj1fullname,TRUE,TRUE,
- trav_grp_objs,trav_grp_symlinks, info1_grp) < 0)
+ if(h5trav_visit(file1_id, obj1fullname, TRUE, TRUE,
+ trav_grp_objs, trav_grp_symlinks, info1_grp) < 0)
{
parallel_print("Error: Could not get file contents\n");
options->err_stat = 1;
@@ -988,59 +993,71 @@ hsize_t h5diff(const char *fname1,
}
info1_lp = info1_grp;
- /*
- * traverse group2
+ /*
+ * traverse group2
*/
trav_info_init(fname2, file2_id, &info2_grp);
/* optional data pass */
info2_grp->opts = (diff_opt_t*)options;
- if(h5trav_visit(file2_id,obj2fullname,TRUE,TRUE,
- trav_grp_objs,trav_grp_symlinks, info2_grp) < 0)
+ if(h5trav_visit(file2_id, obj2fullname, TRUE, TRUE,
+ trav_grp_objs, trav_grp_symlinks, info2_grp) < 0)
{
parallel_print("Error: Could not get file contents\n");
options->err_stat = 1;
goto out;
} /* end if */
info2_lp = info2_grp;
-
+ }
#ifdef H5_HAVE_PARALLEL
- if(g_Parallel)
+ if(g_Parallel)
+ {
+ if((HDstrlen(fname1) > MAX_FILENAME) || (HDstrlen(fname2) > MAX_FILENAME))
{
- if((HDstrlen(fname1) > MAX_FILENAME) ||
- (HDstrlen(fname2) > MAX_FILENAME))
- {
- HDfprintf(stderr, "The parallel diff only supports path names up to %d characters\n", MAX_FILENAME);
- MPI_Abort(MPI_COMM_WORLD, 0);
- } /* end if */
+ HDfprintf(stderr, "The parallel diff only supports path names up to %d characters\n", MAX_FILENAME);
+ MPI_Abort(MPI_COMM_WORLD, 0);
+ } /* end if */
- HDstrcpy(filenames[0], fname1);
- HDstrcpy(filenames[1], fname2);
+ HDstrcpy(filenames[0], fname1);
+ HDstrcpy(filenames[1], fname2);
- /* Alert the worker tasks that there's going to be work. */
- for(i = 1; i < g_nTasks; i++)
- MPI_Send(filenames, (MAX_FILENAME * 2), MPI_CHAR, i, MPI_TAG_PARALLEL, MPI_COMM_WORLD);
- } /* end if */
-#endif
- build_match_list (obj1fullname, info1_lp, obj2fullname, info2_lp,
- &match_list, options);
- nfound = diff_match(file1_id, obj1fullname, info1_lp,
- file2_id, obj2fullname, info2_lp,
- match_list, options);
- }
- else
- {
-#ifdef H5_HAVE_PARALLEL
- if(g_Parallel)
- /* Only single object diff, parallel workers won't be needed */
- phdiff_dismiss_workers();
+ /* Alert the worker tasks that there's going to be work. */
+ for(i = 1; i < g_nTasks; i++)
+ MPI_Send(filenames, (MAX_FILENAME * 2), MPI_CHAR, i, MPI_TAG_PARALLEL, MPI_COMM_WORLD);
+ } /* end if */
#endif
- nfound = diff_compare(file1_id, fname1, obj1fullname, info1_lp,
- file2_id, fname2, obj2fullname, info2_lp,
- options);
+ /* process the objects */
+ build_match_list (obj1fullname, info1_lp, obj2fullname, info2_lp,
+ &match_list, options);
+ if (both_objs_grp)
+ {
+ /*------------------------------------------------------
+ * print the list
+ */
+ if(options->m_verbose)
+ {
+ parallel_print("\n");
+ /* if given objects is group under root */
+ if (HDstrcmp (obj1fullname,"/") || HDstrcmp (obj2fullname,"/"))
+ parallel_print("group1 group2\n");
+ else
+ parallel_print("file1 file2\n");
+ parallel_print("---------------------------------------\n");
+ for(i = 0; i < match_list->nobjs; i++)
+ {
+ char c1, c2;
+ c1 = (match_list->objs[i].flags[0]) ? 'x' : ' ';
+ c2 = (match_list->objs[i].flags[1]) ? 'x' : ' ';
+ parallel_print("%5c %6c %-15s\n", c1, c2, match_list->objs[i].name);
+ } /* end for */
+ parallel_print ("\n");
+ } /* end if */
}
+ nfound = diff_match(file1_id, obj1fullname, info1_lp,
+ file2_id, obj2fullname, info2_lp,
+ match_list, options);
out:
#ifdef H5_HAVE_PARALLEL
@@ -1077,6 +1094,7 @@ out:
H5Fclose(file1_id);
H5Fclose(file2_id);
} H5E_END_TRY;
+ h5difftrace("h5diff finish\n");
return nfound;
}
@@ -1125,6 +1143,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
size_t idx2 = 0;
+ h5difftrace("diff_match start\n");
/*
* if not root, prepare object name to be pre-appended to group path to
* make full path
@@ -1142,7 +1161,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
*-------------------------------------------------------------------------
*/
- /* not valid compare nused when --exclude-path option is used */
+ /* not valid compare used when --exclude-path option is used */
if (!options->exclude_path)
{
/* number of different objects */
@@ -1222,7 +1241,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
{
int workerFound = 0;
- h5diffdebug("beginning of big else block\n");
+ h5difftrace("Beginning of big else block\n");
/* We're in parallel mode */
/* Since the data type of diff value is hsize_t which can
* be arbitary large such that there is no MPI type that
@@ -1247,7 +1266,6 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
args.argdata.type[1] = info2->paths[idx2].type;
args.argdata.is_same_trgobj = table->objs[i].is_same_trgobj;
- h5diffdebug2("busyTasks=%d\n", busyTasks);
/* if there are any outstanding print requests, let's handle one. */
if(busyTasks > 0)
{
@@ -1319,7 +1337,6 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
} /* end if */
} /* end for */
- h5diffdebug2("workerfound is %d \n", workerFound);
if(!workerFound)
{
/* if they were all busy, we've got to wait for one free up
@@ -1395,7 +1412,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
HDfree (obj2_fullpath);
} /* end if */
} /* end for */
- h5diffdebug("done with for loop\n");
+ h5difftrace("done with for loop\n");
#ifdef H5_HAVE_PARALLEL
if(g_Parallel)
@@ -1411,14 +1428,6 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
options->not_cmp = options->not_cmp | nFoundbyWorker.not_cmp;
busyTasks--;
} /* end if */
- else if(Status.MPI_TAG == MPI_TAG_TOK_RETURN)
- {
- MPI_Recv(&nFoundbyWorker, sizeof(nFoundbyWorker), MPI_BYTE, Status.MPI_SOURCE, MPI_TAG_DONE, MPI_COMM_WORLD, &Status);
- nfound += nFoundbyWorker.nfound;
- options->not_cmp = options->not_cmp | nFoundbyWorker.not_cmp;
- busyTasks--;
- havePrintToken = 1;
- } /* end else-if */
else if(Status.MPI_TAG == MPI_TAG_TOK_REQUEST)
{
MPI_Recv(NULL, 0, MPI_BYTE, Status.MPI_SOURCE, MPI_TAG_TOK_REQUEST, MPI_COMM_WORLD, &Status);
@@ -1490,7 +1499,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
/* Print any final data waiting in our queue */
print_incoming_data();
} /* end if */
- h5diffdebug("done with if block\n");
+ h5difftrace("done with if block\n");
HDfree(workerTasks);
}
@@ -1499,130 +1508,7 @@ hsize_t diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1,
/* free table */
if (table)
trav_table_free(table);
-
- return nfound;
-}
-
-
-/*-------------------------------------------------------------------------
- * Function: diff_compare
- *
- * Purpose: get objects from list, and check for the same type
- *
- * Return: Number of differences found
- *
- * Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
- * Date: May 9, 2003
- *
- * Programmer: Jonathan Kim
- * - add following links feature (Feb 11,2010)
- *-------------------------------------------------------------------------
- */
-
-hsize_t diff_compare(hid_t file1_id,
- const char *file1_name,
- const char *obj1_name,
- trav_info_t *info1,
- hid_t file2_id,
- const char *file2_name,
- const char *obj2_name,
- trav_info_t *info2,
- diff_opt_t *options)
-{
- int f1 = 0;
- int f2 = 0;
- hsize_t nfound = 0;
- ssize_t i,j;
- int l_ret;
- int is_dangle_link1 = 0;
- int is_dangle_link2 = 0;
- const char *obj1name = obj1_name;
- const char *obj2name = obj2_name;
- diff_args_t argdata;
-
- /* local variables for diff() */
- h5trav_type_t obj1type, obj2type;
-
- /* to get link info */
- h5tool_link_info_t linkinfo1;
- h5tool_link_info_t linkinfo2;
-
- /* init link info struct */
- HDmemset(&linkinfo1, 0, sizeof(h5tool_link_info_t));
- HDmemset(&linkinfo2, 0, sizeof(h5tool_link_info_t));
-
- i = h5trav_getindex (info1, obj1name);
- j = h5trav_getindex (info2, obj2name);
-
- if (i == -1)
- {
- parallel_print ("Object <%s> could not be found in <%s>\n", obj1name,
- file1_name);
- f1 = 1;
- }
- if (j == -1)
- {
- parallel_print ("Object <%s> could not be found in <%s>\n", obj2name,
- file2_name);
- f2 = 1;
- }
- if (f1 || f2)
- {
- options->err_stat = 1;
- return 0;
- }
- /* use the name with "/" first, as obtained by iterator function */
- obj1name = info1->paths[i].path;
- obj2name = info2->paths[j].path;
-
- obj1type = info1->paths[i].type;
- obj2type = info2->paths[j].type;
-
- /* Set argdata to pass other args into diff() */
- argdata.type[0] = obj1type;
- argdata.type[1] = obj2type;
- argdata.is_same_trgobj = 0;
-
- nfound = diff(file1_id, obj1name,
- file2_id, obj2name,
- options, &argdata);
-
-out:
- /*-------------------------------
- * handle dangling link(s) */
- /* both obj1 and obj2 are dangling links */
- if(is_dangle_link1 && is_dangle_link2)
- {
- if(print_objname(options, nfound))
- {
- do_print_objname("dangling link", obj1name, obj2name, options);
- print_found(nfound);
- }
- }
- /* obj1 is dangling link */
- else if (is_dangle_link1)
- {
- if(options->m_verbose)
- parallel_print("obj1 <%s> is a dangling link.\n", obj1name);
- nfound++;
- if(print_objname(options, nfound))
- print_found(nfound);
- }
- /* obj2 is dangling link */
- else if (is_dangle_link2)
- {
- if(options->m_verbose)
- parallel_print("obj2 <%s> is a dangling link.\n", obj2name);
- nfound++;
- if(print_objname(options, nfound))
- print_found(nfound);
- }
-
- /* free link info buffer */
- if (linkinfo1.trg_path)
- HDfree((char *)linkinfo1.trg_path);
- if (linkinfo2.trg_path)
- HDfree((char *)linkinfo2.trg_path);
+ h5difftrace("diff_match finish\n");
return nfound;
}
@@ -1672,11 +1558,12 @@ hsize_t diff(hid_t file1_id,
hsize_t nfound = 0;
h5trav_type_t object_type;
-
/* to get link info */
h5tool_link_info_t linkinfo1;
h5tool_link_info_t linkinfo2;
+ h5difftrace("diff start\n");
+
/*init link info struct */
HDmemset(&linkinfo1,0,sizeof(h5tool_link_info_t));
HDmemset(&linkinfo2,0,sizeof(h5tool_link_info_t));
@@ -1776,6 +1663,7 @@ hsize_t diff(hid_t file1_id,
*/
if (argdata->is_same_trgobj)
{
+ h5difftrace("argdata->is_same_trgobj\n");
is_hard_link = (object_type == H5TRAV_TYPE_DATASET ||
object_type == H5TRAV_TYPE_NAMED_DATATYPE ||
object_type == H5TRAV_TYPE_GROUP);
@@ -2061,6 +1949,7 @@ out2:
H5Tclose(grp2_id);
/* enable error reporting */
} H5E_END_TRY;
+ h5difftrace("diff finish\n");
return nfound;
}
diff --git a/tools/lib/h5diff.h b/tools/lib/h5diff.h
index 6985b68..2530805 100644
--- a/tools/lib/h5diff.h
+++ b/tools/lib/h5diff.h
@@ -19,6 +19,23 @@
#include "hdf5.h"
#include "h5trav.h"
+/*
+ * Debug printf macros. The prefix allows output filtering by test scripts.
+ */
+#ifdef H5DIFF_DEBUG
+#define h5difftrace(x) HDfprintf(stderr, "h5diff debug: " x)
+#define h5diffdebug2(x1, x2) HDfprintf(stderr, "h5diff debug: " x1, x2)
+#define h5diffdebug3(x1, x2, x3) HDfprintf(stderr, "h5diff debug: " x1, x2, x3)
+#define h5diffdebug4(x1, x2, x3, x4) HDfprintf(stderr, "h5diff debug: " x1, x2, x3, x4)
+#define h5diffdebug5(x1, x2, x3, x4, x5) HDfprintf(stderr, "h5diff debug: " x1, x2, x3, x4, x5)
+#else
+#define h5difftrace(x)
+#define h5diffdebug2(x1, x2)
+#define h5diffdebug3(x1, x2, x3)
+#define h5diffdebug4(x1, x2, x3, x4)
+#define h5diffdebug5(x1, x2, x3, x4, x5)
+#endif
+
#define MAX_FILENAME 1024
/*-------------------------------------------------------------------------
@@ -118,15 +135,6 @@ hsize_t diff_datasetid( hid_t dset1_id,
const char *obj2_name,
diff_opt_t *options);
-hsize_t diff_compare( hid_t file1_id,
- const char *file1_name,
- const char *obj1_name,
- trav_info_t *info1,
- hid_t file2_id,
- const char *file2_name,
- const char *obj2_name,
- trav_info_t *info2,
- diff_opt_t *options );
hsize_t diff_match( hid_t file1_id, const char *grp1, trav_info_t *info1,
hid_t file2_id, const char *grp2, trav_info_t *info2,
@@ -172,6 +180,7 @@ hsize_t diff_attr(hid_t loc1_id,
*-------------------------------------------------------------------------
*/
+/* in h5diff_util.c */
void print_found(hsize_t nfound);
void print_type(hid_t type);
const char* diff_basename(const char *name);
@@ -179,6 +188,10 @@ const char* get_type(h5trav_type_t type);
const char* get_class(H5T_class_t tclass);
const char* get_sign(H5T_sign_t sign);
void print_dimensions (int rank, hsize_t *dims);
+herr_t match_up_memsize (hid_t f_tid1_id, hid_t f_tid2_id,
+ hid_t *m_tid1, hid_t *m_tid2,
+ size_t *m_size1, size_t *m_size2);
+/* in h5diff.c */
int print_objname(diff_opt_t *options, hsize_t nfound);
void do_print_objname (const char *OBJ, const char *path1, const char *path2, diff_opt_t * opts);
void do_print_attrname (const char *attr, const char *path1, const char *path2);
diff --git a/tools/lib/h5diff_array.c b/tools/lib/h5diff_array.c
index 604a825..1e7f88b 100644
--- a/tools/lib/h5diff_array.c
+++ b/tools/lib/h5diff_array.c
@@ -230,6 +230,7 @@ hsize_t diff_array( void *_mem1,
mcomp_t members;
H5T_class_t type_class;
+ h5difftrace("diff_array start\n");
/* get the size. */
size = H5Tget_size( m_type );
type_class = H5Tget_class(m_type);
@@ -344,6 +345,7 @@ hsize_t diff_array( void *_mem1,
} /* i */
close_member_types(&members);
} /* switch */
+ h5difftrace("diff_array finish\n");
return nfound;
}
@@ -423,6 +425,7 @@ hsize_t diff_datum(void *_mem1,
double per;
int both_zero;
+ h5difftrace("diff_datum start\n");
type_size = H5Tget_size( m_type );
type_class = H5Tget_class(m_type);
@@ -2537,6 +2540,7 @@ hsize_t diff_datum(void *_mem1,
break; /* H5T_FLOAT class */
} /* switch */
+ h5difftrace("diff_datum finish\n");
return nfound;
}
@@ -2822,6 +2826,7 @@ hsize_t character_compare(unsigned char *mem1,
HDmemcpy(&temp1_uchar, mem1, sizeof(unsigned char));
HDmemcpy(&temp2_uchar, mem2, sizeof(unsigned char));
+ h5difftrace("character_compare start\n");
if (temp1_uchar != temp2_uchar)
{
@@ -2836,6 +2841,7 @@ hsize_t character_compare(unsigned char *mem1,
}
nfound++;
}
+ h5difftrace("character_compare finish\n");
return nfound;
}
@@ -2872,6 +2878,7 @@ hsize_t character_compare_opt(unsigned char *mem1,
HDmemcpy(&temp1_uchar, mem1, sizeof(unsigned char));
HDmemcpy(&temp2_uchar, mem2, sizeof(unsigned char));
+ h5difftrace("character_compare_opt start\n");
/* -d and !-p */
if (options->d && !options->p)
@@ -2927,6 +2934,7 @@ hsize_t character_compare_opt(unsigned char *mem1,
}
nfound++;
}
+ h5difftrace("character_compare_opt finish\n");
return nfound;
@@ -2965,6 +2973,7 @@ hsize_t diff_float(unsigned char *mem1,
int isnan1=0;
int isnan2=0;
+ h5difftrace("diff_float start\n");
/*-------------------------------------------------------------------------
* -d and !-p
@@ -3202,6 +3211,7 @@ hsize_t diff_float(unsigned char *mem1,
}
+ h5difftrace("diff_float finish\n");
return nfound;
}
@@ -3239,6 +3249,7 @@ hsize_t diff_double(unsigned char *mem1,
int isnan1=0;
int isnan2=0;
+ h5difftrace("diff_double start\n");
/*-------------------------------------------------------------------------
* -d and !-p
*-------------------------------------------------------------------------
@@ -3479,6 +3490,7 @@ hsize_t diff_double(unsigned char *mem1,
}
+ h5difftrace("diff_double finish\n");
return nfound;
}
@@ -3521,6 +3533,7 @@ hsize_t diff_ldouble(unsigned char *mem1,
int isnan1=0;
int isnan2=0;
+ h5difftrace("diff_ldouble start\n");
/*-------------------------------------------------------------------------
* -d and !-p
@@ -3762,6 +3775,7 @@ hsize_t diff_ldouble(unsigned char *mem1,
}
+ h5difftrace("diff_ldouble finish\n");
return nfound;
}
@@ -3802,6 +3816,7 @@ hsize_t diff_schar(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_schar start\n");
/* -d and !-p */
if (options->d && !options->p)
@@ -3943,6 +3958,7 @@ hsize_t diff_schar(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_schar finish\n");
return nfound;
}
@@ -3979,6 +3995,7 @@ hsize_t diff_uchar(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_uchar start\n");
/* -d and !-p */
if (options->d && !options->p)
@@ -4121,6 +4138,7 @@ hsize_t diff_uchar(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_uchar finish\n");
return nfound;
}
@@ -4155,6 +4173,7 @@ hsize_t diff_short(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_short start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -4298,6 +4317,7 @@ hsize_t diff_short(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_short finish\n");
return nfound;
}
@@ -4333,6 +4353,7 @@ hsize_t diff_ushort(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_ushort start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -4476,6 +4497,7 @@ hsize_t diff_ushort(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_ushort finish\n");
return nfound;
}
@@ -4512,6 +4534,7 @@ hsize_t diff_int(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_int start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -4655,6 +4678,7 @@ hsize_t diff_int(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_int finish\n");
return nfound;
}
@@ -4691,6 +4715,7 @@ hsize_t diff_uint(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_uint start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -4832,6 +4857,7 @@ hsize_t diff_uint(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_uint finish\n");
return nfound;
}
@@ -4868,6 +4894,7 @@ hsize_t diff_long(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_long start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -5014,6 +5041,7 @@ hsize_t diff_long(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_long finish\n");
return nfound;
}
@@ -5051,6 +5079,7 @@ hsize_t diff_ulong(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_ulong start\n");
/* -d and !-p */
if (options->d && !options->p)
@@ -5198,6 +5227,7 @@ hsize_t diff_ulong(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_ulong finish\n");
return nfound;
}
@@ -5234,6 +5264,7 @@ hsize_t diff_llong(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_llong start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -5371,6 +5402,7 @@ hsize_t diff_llong(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_llong finish\n");
return nfound;
}
@@ -5408,6 +5440,7 @@ hsize_t diff_ullong(unsigned char *mem1,
double per;
int both_zero;
+ h5difftrace("diff_ullong start\n");
/* -d and !-p */
if (options->d && !options->p)
{
@@ -5549,6 +5582,7 @@ hsize_t diff_ullong(unsigned char *mem1,
} /* nelmts */
}
+ h5difftrace("diff_ullong finish\n");
return nfound;
}
@@ -5575,6 +5609,7 @@ int ull2float(unsigned long long ull_value, float *f_value)
size_t src_size;
size_t dst_size;
+ h5difftrace("ull2float start\n");
if((dxpl_id = H5Pcreate(H5P_DATASET_XFER))<0)
return -1;
@@ -5592,6 +5627,7 @@ int ull2float(unsigned long long ull_value, float *f_value)
if(buf)
HDfree(buf);
+ h5difftrace("ull2float finish\n");
return 0;
@@ -5601,6 +5637,7 @@ error:
} H5E_END_TRY;
if(buf)
HDfree(buf);
+ h5difftrace("ull2float errored\n");
return -1;
}
@@ -5620,6 +5657,7 @@ error:
static
hbool_t equal_double(double value, double expected, diff_opt_t *options)
{
+ h5difftrace("equal_double start\n");
if ( options->do_nans )
{
@@ -5656,6 +5694,7 @@ hbool_t equal_double(double value, double expected, diff_opt_t *options)
if ( ABS( (value-expected) ) < DBL_EPSILON)
return TRUE;
}
+ h5difftrace("equal_double finish\n");
return FALSE;
}
@@ -5673,6 +5712,7 @@ hbool_t equal_double(double value, double expected, diff_opt_t *options)
static
hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *options)
{
+ h5difftrace("equal_ldouble start\n");
if ( options->do_nans )
{
@@ -5709,6 +5749,7 @@ hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *optio
if ( ABS( (value-expected) ) < DBL_EPSILON)
return TRUE;
}
+ h5difftrace("equal_ldouble finish\n");
return FALSE;
}
@@ -5730,6 +5771,7 @@ hbool_t equal_ldouble(long double value, long double expected, diff_opt_t *optio
static
hbool_t equal_float(float value, float expected, diff_opt_t *options)
{
+ h5difftrace("equal_float start\n");
if ( options->do_nans )
{
@@ -5766,6 +5808,7 @@ hbool_t equal_float(float value, float expected, diff_opt_t *options)
if ( ABS( (value-expected) ) < FLT_EPSILON)
return TRUE;
}
+ h5difftrace("equal_float finish\n");
return FALSE;
@@ -5795,6 +5838,7 @@ my_isnan(dtype_t type, void *val)
int retval = 0;
char s[256];
+ h5difftrace("my_isnan start\n");
if (FLT_FLOAT==type)
{
float x;
@@ -5893,6 +5937,7 @@ my_isnan(dtype_t type, void *val)
}
}
#endif /*H5_VMS*/
+ h5difftrace("my_isnan finish\n");
return retval;
}
diff --git a/tools/lib/h5diff_attr.c b/tools/lib/h5diff_attr.c
index 85cd01f..144159a 100644
--- a/tools/lib/h5diff_attr.c
+++ b/tools/lib/h5diff_attr.c
@@ -405,6 +405,14 @@ hsize_t diff_attr(hid_t loc1_id,
continue;
}
+ /*-----------------------------------------------------------------
+ * "upgrade" the smaller memory size
+ *------------------------------------------------------------------
+ */
+ if (FAIL == match_up_memsize (ftype1_id, ftype2_id,
+ &mtype1_id, &mtype2_id,
+ &msize1, &msize2))
+ goto error;
/*---------------------------------------------------------------------
* read
diff --git a/tools/lib/h5diff_dset.c b/tools/lib/h5diff_dset.c
index c1ed429..f9c7d1c 100644
--- a/tools/lib/h5diff_dset.c
+++ b/tools/lib/h5diff_dset.c
@@ -218,6 +218,7 @@ hsize_t diff_datasetid( hid_t did1,
int i;
unsigned int vl_data = 0; /*contains VL datatypes */
+ h5difftrace("diff_datasetid start\n");
/* Get the dataspace handle */
if ( (sid1 = H5Dget_space(did1)) < 0 )
goto error;
@@ -263,6 +264,7 @@ hsize_t diff_datasetid( hid_t did1,
* check for empty datasets
*-------------------------------------------------------------------------
*/
+ h5difftrace("check for empty datasets\n");
storage_size1=H5Dget_storage_size(did1);
storage_size2=H5Dget_storage_size(did2);
@@ -300,6 +302,7 @@ hsize_t diff_datasetid( hid_t did1,
* memory type and sizes
*-------------------------------------------------------------------------
*/
+ h5difftrace("check for memory type and sizes\n");
if ((m_tid1=h5tools_get_native_type(f_tid1)) < 0)
goto error;
@@ -315,10 +318,12 @@ hsize_t diff_datasetid( hid_t did1,
*/
if (can_compare)
{
+ h5difftrace("can_compare for sign\n");
sign1=H5Tget_sign(m_tid1);
sign2=H5Tget_sign(m_tid2);
if ( sign1 != sign2 )
{
+ h5difftrace("sign1 != sign2\n");
if ((options->m_verbose||options->m_list_not_cmp) && obj1_name && obj2_name)
{
parallel_print("Not comparable: <%s> has sign %s ", obj1_name, get_sign(sign1));
@@ -341,6 +346,7 @@ hsize_t diff_datasetid( hid_t did1,
*/
if(can_compare) /* it is possible to compare */
{
+ h5difftrace("can_compare attempt\n");
/*-----------------------------------------------------------------
* get number of elements
@@ -360,26 +366,12 @@ hsize_t diff_datasetid( hid_t did1,
* "upgrade" the smaller memory size
*------------------------------------------------------------------
*/
+ h5difftrace("upgrade the smaller memory size?\n");
- if(m_size1 != m_size2) {
- if(m_size1 < m_size2) {
- H5Tclose(m_tid1);
-
- if((m_tid1 = h5tools_get_native_type(f_tid2)) < 0)
- goto error;
-
- m_size1 = H5Tget_size(m_tid1);
- } /* end if */
- else {
- H5Tclose(m_tid2);
-
- if((m_tid2 = h5tools_get_native_type(f_tid1)) < 0)
- goto error;
-
- m_size2 = H5Tget_size(m_tid2);
- } /* end else */
- } /* end if */
- HDassert(m_size1 == m_size2);
+ if (FAIL == match_up_memsize (f_tid1, f_tid2,
+ &m_tid1, &m_tid2,
+ &m_size1, &m_size2))
+ goto error;
/* print names */
if(obj1_name)
@@ -399,6 +391,7 @@ hsize_t diff_datasetid( hid_t did1,
} /* end if */
if(buf1 != NULL && buf2 != NULL) {
+ h5difftrace("buf1 != NULL && buf2 != NULL\n");
if(H5Dread(did1, m_tid1, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf1) < 0)
goto error;
if(H5Dread(did2, m_tid2, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf2) < 0)
@@ -519,6 +512,7 @@ hsize_t diff_datasetid( hid_t did1,
* the if condition refers to cases when the dataset is a referenced object
*-------------------------------------------------------------------------
*/
+ h5difftrace("compare attributes?\n");
if(obj1_name)
nfound += diff_attr(did1,did2,obj1_name,obj2_name,options);
@@ -526,6 +520,7 @@ hsize_t diff_datasetid( hid_t did1,
* close
*-------------------------------------------------------------------------
*/
+ h5difftrace("compare attributes?\n");
/* free */
if(buf1 != NULL) {
@@ -553,6 +548,7 @@ hsize_t diff_datasetid( hid_t did1,
H5Tclose(m_tid1);
H5Tclose(m_tid2);
} H5E_END_TRY;
+ h5difftrace("diff_datasetid finish\n");
return nfound;
@@ -603,6 +599,7 @@ error:
H5Tclose(m_tid2);
/* enable error reporting */
} H5E_END_TRY;
+ h5difftrace("diff_datasetid errored\n");
return nfound;
}
diff --git a/tools/lib/h5diff_util.c b/tools/lib/h5diff_util.c
index 0d476b6..aefd641 100644
--- a/tools/lib/h5diff_util.c
+++ b/tools/lib/h5diff_util.c
@@ -311,4 +311,46 @@ void print_found(hsize_t nfound)
}
+/*-----------------------------------------------------------------
+ * Function: match_up_memsize
+ *
+ * Purpose: match smaller memory size up to bigger memory size
+ *------------------------------------------------------------------
+ */
+herr_t match_up_memsize (hid_t f_tid1_id, hid_t f_tid2_id,
+ hid_t *m_tid1, hid_t *m_tid2,
+ size_t *m_size1, size_t *m_size2)
+{
+ herr_t ret = SUCCEED;
+
+ if( (*m_size1) != (*m_size2) )
+ {
+ if( (*m_size1) < (*m_size2) )
+ {
+ H5Tclose( *m_tid1 );
+
+ if(( (*m_tid1) = h5tools_get_native_type(f_tid2_id)) < 0)
+ {
+ ret = FAIL;
+ goto out;
+ }
+
+ *m_size1 = H5Tget_size( *m_tid1 );
+ } /* end if */
+ else {
+ H5Tclose(*m_tid2);
+ if(( (*m_tid2) = h5tools_get_native_type(f_tid1_id)) < 0)
+ {
+ ret = FAIL;
+ goto out;
+ }
+
+ *m_size2 = H5Tget_size(*m_tid2);
+ } /* end else */
+ } /* end if */
+ HDassert( (*m_size1) == (*m_size2) );
+
+out:
+ return ret;
+}
diff --git a/tools/lib/h5tools.c b/tools/lib/h5tools.c
index 495aca1..7b6098d 100644
--- a/tools/lib/h5tools.c
+++ b/tools/lib/h5tools.c
@@ -1072,256 +1072,6 @@ init_acc_pos(h5tools_context_t *ctx, hsize_t *dims)
* Failure: FAIL
*-------------------------------------------------------------------------
*/
-
-#ifdef DEBUG_H5DUMP_BIN
-int
-render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem)
-{
- HERR_INIT(int, SUCCEED)
- unsigned char *mem = (unsigned char*)_mem;
- size_t size; /* datum size */
- float tempfloat;
- double tempdouble;
- unsigned long long tempullong;
- long long templlong;
- unsigned long tempulong;
- long templong;
- unsigned int tempuint;
- int tempint;
- unsigned short tempushort;
- short tempshort;
- unsigned char tempuchar;
- char tempschar;
-#if H5_SIZEOF_LONG_DOUBLE !=0
- long double templdouble;
-#endif
- static char fmt_llong[8], fmt_ullong[8];
- if (!fmt_llong[0]) {
- HDsprintf(fmt_llong, "%%%sd", H5_PRINTF_LL_WIDTH);
- HDsprintf(fmt_ullong, "%%%su", H5_PRINTF_LL_WIDTH);
- }
-
- if((size = H5Tget_size(tid)) == 0)
- H5E_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed");
-
- if (H5Tequal(tid, H5T_NATIVE_FLOAT)) {
- HDmemcpy(&tempfloat, mem, sizeof(float));
- HDfprintf(stream, "%g ", tempfloat);
- }
- else if (H5Tequal(tid, H5T_NATIVE_DOUBLE)) {
- HDmemcpy(&tempdouble, mem, sizeof(double));
- HDfprintf(stream, "%g ", tempdouble);
- }
-#if H5_SIZEOF_LONG_DOUBLE !=0
- else if (H5Tequal(tid, H5T_NATIVE_LDOUBLE)) {
- HDmemcpy(&templdouble, mem, sizeof(long double));
- HDfprintf(stream, "%Lf ", templdouble);
- }
-#endif
- else if (H5T_STRING == H5Tget_class(tid)) {
- unsigned int i;
- H5T_str_t pad;
- char *s;
-
- pad = H5Tget_strpad(tid);
-
- if (H5Tis_variable_str(tid)) {
- s = *(char**) mem;
- if (s != NULL)
- size = HDstrlen(s);
- }
- else {
- s = (char *) mem;
- if((size = H5Tget_size(tid)) == 0)
- H5E_THROW(FAIL, H5E_tools_min_id_g, "H5Tget_size failed");
- }
- for (i = 0; i < size && (s[i] || pad != H5T_STR_NULLTERM); i++) {
- HDmemcpy(&tempuchar, &s[i], sizeof(unsigned char));
- HDfprintf(stream, "%d", tempuchar);
- } /* i */
- }
- else if (H5Tequal(tid, H5T_NATIVE_INT)) {
- HDmemcpy(&tempint, mem, sizeof(int));
- HDfprintf(stream, "%d ", tempint);
- }
- else if (H5Tequal(tid, H5T_NATIVE_UINT)) {
- HDmemcpy(&tempuint, mem, sizeof(unsigned int));
- HDfprintf(stream, "%u ", tempuint);
- }
- else if (H5Tequal(tid, H5T_NATIVE_SCHAR)) {
- HDmemcpy(&tempschar, mem, sizeof(char));
- HDfprintf(stream, "%d ", tempschar);
- }
- else if (H5Tequal(tid, H5T_NATIVE_UCHAR)) {
- HDmemcpy(&tempuchar, mem, sizeof(unsigned char));
- HDfprintf(stream, "%u ", tempuchar);
- }
- else if (H5Tequal(tid, H5T_NATIVE_SHORT)) {
- HDmemcpy(&tempshort, mem, sizeof(short));
- HDfprintf(stream, "%d ", tempshort);
- }
- else if (H5Tequal(tid, H5T_NATIVE_USHORT)) {
- HDmemcpy(&tempushort, mem, sizeof(unsigned short));
- HDfprintf(stream, "%u ", tempushort);
- }
- else if (H5Tequal(tid, H5T_NATIVE_LONG)) {
- HDmemcpy(&templong, mem, sizeof(long));
- HDfprintf(stream, "%ld ", templong);
- }
- else if (H5Tequal(tid, H5T_NATIVE_ULONG)) {
- HDmemcpy(&tempulong, mem, sizeof(unsigned long));
- HDfprintf(stream, "%lu ", tempulong);
- }
- else if (H5Tequal(tid, H5T_NATIVE_LLONG)) {
- HDmemcpy(&templlong, mem, sizeof(long long));
- HDfprintf(stream, fmt_llong, templlong);
- }
- else if (H5Tequal(tid, H5T_NATIVE_ULLONG)) {
- HDmemcpy(&tempullong, mem, sizeof(unsigned long long));
- HDfprintf(stream, fmt_ullong, tempullong);
- }
- else if (H5Tequal(tid, H5T_NATIVE_HSSIZE)) {
- if (sizeof(hssize_t) == sizeof(int)) {
- HDmemcpy(&tempint, mem, sizeof(int));
- HDfprintf(stream, "%d ", tempint);
- }
- else if (sizeof(hssize_t) == sizeof(long)) {
- HDmemcpy(&templong, mem, sizeof(long));
- HDfprintf(stream, "%ld ", templong);
- }
- else {
- HDmemcpy(&templlong, mem, sizeof(long long));
- HDfprintf(stream, fmt_llong, templlong);
- }
- }
- else if (H5Tequal(tid, H5T_NATIVE_HSIZE)) {
- if (sizeof(hsize_t) == sizeof(int)) {
- HDmemcpy(&tempuint, mem, sizeof(unsigned int));
- HDfprintf(stream, "%u ", tempuint);
- }
- else if (sizeof(hsize_t) == sizeof(long)) {
- HDmemcpy(&tempulong, mem, sizeof(unsigned long));
- HDfprintf(stream, "%lu ", tempulong);
- }
- else {
- HDmemcpy(&tempullong, mem, sizeof(unsigned long long));
- HDfprintf(stream, fmt_ullong, tempullong);
- }
- }
- else if (H5Tget_class(tid) == H5T_COMPOUND) {
- unsigned j;
- hid_t memb;
- unsigned nmembs;
- size_t offset;
-
- nmembs = H5Tget_nmembers(tid);
-
- for (j = 0; j < nmembs; j++) {
- offset = H5Tget_member_offset(tid, j);
- memb = H5Tget_member_type(tid, j);
-
- if (render_bin_output(stream, container, memb, mem + offset) < 0)
- return FAIL;
-
- H5Tclose(memb);
- }
- }
- else if (H5Tget_class(tid) == H5T_ENUM) {
- unsigned int i;
- if (1 == size) {
- HDfprintf(stream, "0x%02x", mem[0]);
- }
- else {
- for (i = 0; i < size; i++) {
- HDfprintf(stream, "%s%02x", i?":":"", mem[i]);
- } /*i*/
- }/*else 1 */
- }
- else if (H5Tget_class(tid) == H5T_ARRAY) {
- int k, ndims;
- hsize_t i, dims[H5S_MAX_RANK], temp_nelmts, nelmts;
- hid_t memb;
-
- /* get the array's base datatype for each element */
- memb = H5Tget_super(tid);
- size = H5Tget_size(memb);
- ndims = H5Tget_array_ndims(tid);
- H5Tget_array_dims2(tid, dims);
- HDassert(ndims >= 1 && ndims <= H5S_MAX_RANK);
-
- /* calculate the number of array elements */
- for (k = 0, nelmts = 1; k < ndims; k++) {
- temp_nelmts = nelmts;
- temp_nelmts *= dims[k];
- nelmts = (size_t) temp_nelmts;
- }
-
- /* dump the array element */
- for (i = 0; i < nelmts; i++) {
- if (render_bin_output(stream, container, memb, mem + i * size) < 0)
- H5E_THROW(FAIL, H5E_tools_min_id_g, "render_bin_output failed");
- }
-
- H5Tclose(memb);
- }
- else if (H5Tget_class(tid) == H5T_VLEN) {
- unsigned int i;
- hsize_t nelmts;
- hid_t memb;
-
- /* get the VL sequences's base datatype for each element */
- memb = H5Tget_super(tid);
- size = H5Tget_size(memb);
-
- /* Get the number of sequence elements */
- nelmts = ((hvl_t *) mem)->len;
-
- for (i = 0; i < nelmts; i++) {
- /* dump the array element */
- if (render_bin_output(stream, container, memb, ((char *) (((hvl_t *) mem)->p)) + i * size) < 0)
- H5E_THROW(FAIL, H5E_tools_min_id_g, "render_bin_output failed");
- }
- H5Tclose(memb);
- }
- else if (H5Tequal(tid, H5T_STD_REF_DSETREG)) {
- if (region_output) {
- /* region data */
- hid_t region_id, region_space;
- H5S_sel_type region_type;
-
- region_id = H5Rdereference2(container, H5P_DEFAULT, H5R_DATASET_REGION, mem);
- if (region_id >= 0) {
- region_space = H5Rget_region(container, H5R_DATASET_REGION, mem);
- if (region_space >= 0) {
- region_type = H5Sget_select_type(region_space);
- if(region_type == H5S_SEL_POINTS)
- render_bin_output_region_points(region_space, region_id, stream, container);
- else
- render_bin_output_region_blocks(region_space, region_id, stream, container);
- H5Sclose(region_space);
- } /* end if (region_space >= 0) */
- H5Dclose(region_id);
- } /* end if (region_id >= 0) */
- } /* end if (region_output... */
- }
- else if (H5Tequal(tid, H5T_STD_REF_OBJ)) {
- }
- else {
- size_t i;
- if (1 == size) {
- HDfprintf(stream, "0x%02x", mem[0]);
- }
- else {
- for (i = 0; i < size; i++) {
- HDfprintf(stream, "%s%02x", i?":":"", mem[i]);
- } /*i*/
- }/*else 1 */
- }
-
-CATCH
- return ret_value;
-}
-#else
int
render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t block_nelmts)
{
@@ -1504,7 +1254,6 @@ render_bin_output(FILE *stream, hid_t container, hid_t tid, void *_mem, hsize_t
CATCH
return ret_value;
}
-#endif
/*-------------------------------------------------------------------------
* Audience: Public
diff --git a/tools/lib/h5tools_utils.c b/tools/lib/h5tools_utils.c
index 11ab5f3..79322bc 100644
--- a/tools/lib/h5tools_utils.c
+++ b/tools/lib/h5tools_utils.c
@@ -852,6 +852,8 @@ H5tools_get_symlink_info(hid_t file_id, const char * linkpath, h5tool_link_info_
/* set target obj type to return */
link_info->trg_type = trg_oinfo.type;
+ link_info->objno = trg_oinfo.addr;
+ link_info->fileno = trg_oinfo.fileno;
} /* end if */
else
link_info->trg_type = H5O_TYPE_UNKNOWN;
diff --git a/tools/lib/h5tools_utils.h b/tools/lib/h5tools_utils.h
index f30974a..10c643d 100644
--- a/tools/lib/h5tools_utils.h
+++ b/tools/lib/h5tools_utils.h
@@ -161,6 +161,8 @@ typedef struct {
H5O_type_t trg_type; /* OUT: target type */
const char *trg_path; /* OUT: target obj path. This must be freed
* when used with H5tools_get_symlink_info() */
+ haddr_t objno; /* OUT: target object address */
+ unsigned long fileno; /* OUT: File number that target object is located in */
H5L_info_t linfo; /* OUT: link info */
h5tool_opt_t opt; /* IN: options */
} h5tool_link_info_t;
diff --git a/tools/lib/h5trav.c b/tools/lib/h5trav.c
index 0215c46..8455360 100644
--- a/tools/lib/h5trav.c
+++ b/tools/lib/h5trav.c
@@ -354,6 +354,31 @@ trav_info_add(trav_info_t *info, const char *path, h5trav_type_t obj_type)
info->paths[idx].objno = HADDR_UNDEF;
} /* end trav_info_add() */
+
+/*-------------------------------------------------------------------------
+ * Function: trav_fileinfo_add
+ *
+ * Purpose: Add a file addr & fileno to info struct
+ *
+ * Return: void
+ *
+ *-------------------------------------------------------------------------
+ */
+void
+trav_fileinfo_add(trav_info_t *info, hid_t loc_id)
+{
+ H5O_info_t oinfo;
+ size_t idx = info->nused - 1;
+
+ if ( info->paths[idx].path && HDstrcmp(info->paths[idx].path, "."))
+ H5Oget_info_by_name(loc_id, info->paths[idx].path, &oinfo, H5P_DEFAULT);
+ else
+ H5Oget_info(loc_id, &oinfo);
+
+ info->paths[idx].objno = oinfo.addr;
+ info->paths[idx].fileno = oinfo.fileno;
+} /* end trav_fileinfo_add() */
+
/*-------------------------------------------------------------------------
* Function: trav_info_visit_obj
diff --git a/tools/lib/h5trav.h b/tools/lib/h5trav.h
index c416cf8..3548c6b 100644
--- a/tools/lib/h5trav.h
+++ b/tools/lib/h5trav.h
@@ -177,6 +177,8 @@ H5TOOLS_DLL void trav_info_free(trav_info_t *info);
H5TOOLS_DLL void trav_info_add(trav_info_t *info, const char *path, h5trav_type_t obj_type);
+H5TOOLS_DLL void trav_fileinfo_add(trav_info_t *info, hid_t loc_id);
+
/*-------------------------------------------------------------------------
* table private functions
*-------------------------------------------------------------------------
generated by cgit v0.12 at 2025-09-15 02:39:44 (GMT)