diff options
Diffstat (limited to 'tools/src/h5dump')
-rw-r--r-- | tools/src/h5dump/CMakeLists.txt | 17 | ||||
-rw-r--r-- | tools/src/h5dump/Makefile.in | 2 | ||||
-rw-r--r-- | tools/src/h5dump/h5dump.c | 2 | ||||
-rw-r--r-- | tools/src/h5dump/h5dump_ddl.c | 12 | ||||
-rw-r--r-- | tools/src/h5dump/h5dump_xml.c | 10 |
5 files changed, 21 insertions, 22 deletions
diff --git a/tools/src/h5dump/CMakeLists.txt b/tools/src/h5dump/CMakeLists.txt index 1133218..25166c7 100644 --- a/tools/src/h5dump/CMakeLists.txt +++ b/tools/src/h5dump/CMakeLists.txt @@ -1,10 +1,5 @@ cmake_minimum_required (VERSION 3.10) -PROJECT (HDF5_TOOLS_SRC_H5DUMP) - -#----------------------------------------------------------------------------- -# Setup include Directories -#----------------------------------------------------------------------------- -INCLUDE_DIRECTORIES (${HDF5_TOOLS_DIR}/lib) +project (HDF5_TOOLS_SRC_H5DUMP C) # -------------------------------------------------------------------- # Add the h5dump executables @@ -14,8 +9,9 @@ add_executable (h5dump ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.c ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.c ) -TARGET_C_PROPERTIES (h5dump STATIC " " " ") -target_link_libraries (h5dump ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) +target_include_directories(h5dump PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") +TARGET_C_PROPERTIES (h5dump STATIC) +target_link_libraries (h5dump PRIVATE ${HDF5_TOOLS_LIB_TARGET} ${HDF5_LIB_TARGET}) set_target_properties (h5dump PROPERTIES FOLDER tools) set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5dump") @@ -27,8 +23,9 @@ if (BUILD_SHARED_LIBS) ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_ddl.c ${HDF5_TOOLS_SRC_H5DUMP_SOURCE_DIR}/h5dump_xml.c ) - TARGET_C_PROPERTIES (h5dump-shared SHARED " " " ") - target_link_libraries (h5dump-shared ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) + target_include_directories(h5dump-shared PRIVATE "${HDF5_TOOLS_DIR}/lib;${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (h5dump-shared SHARED) + target_link_libraries (h5dump-shared PRIVATE ${HDF5_TOOLS_LIBSH_TARGET} ${HDF5_LIBSH_TARGET}) set_target_properties (h5dump-shared PROPERTIES FOLDER tools) set_global_variable (HDF5_UTILS_TO_EXPORT "${HDF5_UTILS_TO_EXPORT};h5dump-shared") diff --git a/tools/src/h5dump/Makefile.in b/tools/src/h5dump/Makefile.in index 5c7ff6e..c15a857 100644 --- a/tools/src/h5dump/Makefile.in +++ b/tools/src/h5dump/Makefile.in @@ -538,6 +538,7 @@ JAVA_PATH_NAME = @JAVA_PATH_NAME@ JAVA_VERSION = @JAVA_VERSION@ JNIFLAGS = @JNIFLAGS@ JUNIT = @JUNIT@ +LARGE_PARALLEL_IO = @LARGE_PARALLEL_IO@ LD = @LD@ LDFLAGS = @LDFLAGS@ LIBOBJS = @LIBOBJS@ @@ -585,6 +586,7 @@ PAC_FORTRAN_NATIVE_REAL_KIND = @PAC_FORTRAN_NATIVE_REAL_KIND@ PAC_FORTRAN_NATIVE_REAL_SIZEOF = @PAC_FORTRAN_NATIVE_REAL_SIZEOF@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ +PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ diff --git a/tools/src/h5dump/h5dump.c b/tools/src/h5dump/h5dump.c index 25e4858..a5f0369 100644 --- a/tools/src/h5dump/h5dump.c +++ b/tools/src/h5dump/h5dump.c @@ -1482,7 +1482,7 @@ main(int argc, const char *argv[]) } /* Get object info for root group */ - if(H5Oget_info_by_name(fid, "/", &oi, H5P_DEFAULT) < 0) { + if(H5Oget_info_by_name2(fid, "/", &oi, H5O_INFO_BASIC, H5P_DEFAULT) < 0) { error_msg("internal error (file %s:line %d)\n", __FILE__, __LINE__); h5tools_setstatus(EXIT_FAILURE); goto done; diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c index 6646626..5c47abd 100644 --- a/tools/src/h5dump/h5dump_ddl.c +++ b/tools/src/h5dump/h5dump_ddl.c @@ -229,7 +229,7 @@ dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ATTR H5O_info_t oinfo; /* Stat the object */ - if(H5Oget_info_by_name(group, name, &oinfo, H5P_DEFAULT) < 0) { + if(H5Oget_info_by_name2(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) { error_msg("unable to get object information for \"%s\"\n", name); h5tools_setstatus(EXIT_FAILURE); ret = FAIL; @@ -706,7 +706,7 @@ dump_named_datatype(hid_t tid, const char *name) h5tools_dump_header_format->datatypeblockbegin); h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0); - H5Oget_info(tid, &oinfo); + H5Oget_info2(tid, &oinfo, H5O_INFO_BASIC); /* Must check for uniqueness of all objects if we've traversed an elink, * otherwise only check if the reference count > 1. @@ -876,7 +876,7 @@ dump_group(hid_t gid, const char *name) h5tools_dump_comment(rawoutstream, outputformat, &ctx, gid); - H5Oget_info(gid, &oinfo); + H5Oget_info2(gid, &oinfo, H5O_INFO_BASIC); /* Must check for uniqueness of all objects if we've traversed an elink, * otherwise only check if the reference count > 1. @@ -1512,7 +1512,7 @@ handle_paths(hid_t fid, const char *path_name, void H5_ATTR_UNUSED * data, int H handle_udata.fid = fid; handle_udata.op_name = path_name; - if(h5trav_visit(fid, "/", TRUE, TRUE, obj_search, lnk_search, &handle_udata) < 0) { + if(h5trav_visit(fid, "/", TRUE, TRUE, obj_search, lnk_search, &handle_udata, H5O_INFO_BASIC) < 0) { error_msg("error traversing information\n"); h5tools_setstatus(EXIT_FAILURE); } @@ -1800,7 +1800,7 @@ handle_datasets(hid_t fid, const char *dset, void *data, int pe, const char *dis } /* end if */ - H5Oget_info(dsetid, &oinfo); + H5Oget_info2(dsetid, &oinfo, H5O_INFO_BASIC); if(oinfo.rc > 1 || hit_elink) { obj_t *found_obj; /* Found object */ @@ -2101,7 +2101,7 @@ dump_extlink(hid_t group, const char *linkname, const char *objname) goto fail; /* Get object info */ - if (H5Oget_info(oid, &oi) < 0) { + if (H5Oget_info2(oid, &oi, H5O_INFO_BASIC) < 0) { H5Oclose(oid); goto fail; } diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c index 4e13df3..e399d8f 100644 --- a/tools/src/h5dump/h5dump_xml.c +++ b/tools/src/h5dump/h5dump_xml.c @@ -180,7 +180,7 @@ xml_dump_all_cb(hid_t group, const char *name, const H5L_info_t *linfo, void H5_ H5O_info_t oinfo; /* Stat the object */ - if(H5Oget_info_by_name(group, name, &oinfo, H5P_DEFAULT) < 0) { + if(H5Oget_info_by_name2(group, name, &oinfo, H5O_INFO_BASIC, H5P_DEFAULT) < 0) { error_msg("unable to get object information for \"%s\"\n", name); h5tools_setstatus(EXIT_FAILURE); ret = FAIL; @@ -881,7 +881,7 @@ xml_print_datatype(hid_t type, unsigned in_group) obj_t *found_obj; /* Found object */ /* detect a shared datatype, output only once */ - H5Oget_info(type, &oinfo); + H5Oget_info2(type, &oinfo, H5O_INFO_BASIC); found_obj = search_obj(type_table, oinfo.addr); if(found_obj) { @@ -1534,7 +1534,7 @@ xml_dump_datatype(hid_t type) obj_t *found_obj; /* Found object */ /* Datatype is a shared or named datatype */ - H5Oget_info(type, &oinfo); + H5Oget_info2(type, &oinfo, H5O_INFO_BASIC); found_obj = search_obj(type_table, oinfo.addr); if(found_obj) { @@ -2362,7 +2362,7 @@ xml_dump_named_datatype(hid_t type, const char *name) h5tools_render_element(rawoutstream, outputformat, &ctx, &buffer, &curr_pos, (size_t)outputformat->line_ncols, (hsize_t)0, (hsize_t)0); /* Check uniqueness of named datatype */ - H5Oget_info(type, &oinfo); + H5Oget_info2(type, &oinfo, H5O_INFO_BASIC); if(oinfo.rc > 1) { obj_t *found_obj; /* Found object */ @@ -2548,7 +2548,7 @@ xml_dump_group(hid_t gid, const char *name) } } - H5Oget_info(gid, &oinfo); + H5Oget_info2(gid, &oinfo, H5O_INFO_BASIC); if(oinfo.rc > 1) { obj_t *found_obj; /* Found object */ |