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-rw-r--r--tools/src/h5jam/h5unjam.c201
1 files changed, 87 insertions, 114 deletions
diff --git a/tools/src/h5jam/h5unjam.c b/tools/src/h5jam/h5unjam.c
index b48e2c1..d02cada 100644
--- a/tools/src/h5jam/h5unjam.c
+++ b/tools/src/h5jam/h5unjam.c
@@ -21,34 +21,28 @@
#define COPY_BUF_SIZE 1024
-hsize_t write_pad( int , hsize_t );
-hsize_t compute_pad( hsize_t );
-herr_t copy_to_file( FILE *, FILE * , ssize_t, ssize_t );
+hsize_t write_pad(int, hsize_t);
+hsize_t compute_pad(hsize_t);
+herr_t copy_to_file(FILE *, FILE *, ssize_t, ssize_t);
-int do_delete = FALSE;
+int do_delete = FALSE;
char *output_file = NULL;
-char *input_file = NULL;
-char *ub_file = NULL;
+char *input_file = NULL;
+char *ub_file = NULL;
/*
* Command-line options: The user can specify short or long-named
* parameters. The long-named ones can be partially spelled. When
* adding more, make sure that they don't clash with each other.
*/
-static const char *s_opts = "hu:i:o:d:V";
+static const char * s_opts = "hu:i:o:d:V";
static struct long_options l_opts[] = {
- { "help", no_arg, 'h' },
- { "hel", no_arg, 'h' },
- {"i", require_arg, 'i'}, /* input file */
- {"u", require_arg, 'u'}, /* user block file */
- {"o", require_arg, 'o'}, /* output file */
- {"delete", no_arg, 'd'}, /* delete ub */
- {"delet", no_arg, 'd'},
- {"dele", no_arg, 'd'},
- {"del", no_arg, 'd'},
- {"de", no_arg, 'd'},
- { NULL, 0, '\0' }
-};
+ {"help", no_arg, 'h'}, {"hel", no_arg, 'h'}, {"i", require_arg, 'i'}, /* input file */
+ {"u", require_arg, 'u'}, /* user block file */
+ {"o", require_arg, 'o'}, /* output file */
+ {"delete", no_arg, 'd'}, /* delete ub */
+ {"delet", no_arg, 'd'}, {"dele", no_arg, 'd'}, {"del", no_arg, 'd'},
+ {"de", no_arg, 'd'}, {NULL, 0, '\0'}};
/*-------------------------------------------------------------------------
* Function: usage
@@ -62,55 +56,34 @@ static void
usage(const char *prog)
{
HDfflush(stdout);
- HDfprintf(stdout,
- "usage: %s -i <in_file.h5> [-o <out_file.h5> ] [-u <out_user_file> | --delete]\n", prog);
+ HDfprintf(stdout, "usage: %s -i <in_file.h5> [-o <out_file.h5> ] [-u <out_user_file> | --delete]\n",
+ prog);
HDfprintf(stdout, "\n");
- HDfprintf(stdout,
- "Splits user file and HDF5 file into two files: user block data and HDF5 data.\n");
+ HDfprintf(stdout, "Splits user file and HDF5 file into two files: user block data and HDF5 data.\n");
HDfprintf(stdout, "\n");
- HDfprintf(stdout,
- "OPTIONS\n");
- HDfprintf(stdout,
- " -i in_file.h5 Specifies the HDF5 as input. If the input HDF5 file\n");
- HDfprintf(stdout,
- " contains no user block, exit with an error message.\n");
- HDfprintf(stdout,
- " -o out_file.h5 Specifies output HDF5 file without a user block.\n");
- HDfprintf(stdout,
- " If not specified, the user block will be removed from the\n");
- HDfprintf(stdout,
- " input HDF5 file.\n");
- HDfprintf(stdout,
- " -u out_user_file\n");
- HDfprintf(stdout,
- " Specifies the output file containing the data from the\n");
- HDfprintf(stdout,
- " user block.\n");
- HDfprintf(stdout,
- " Cannot be used with --delete option.\n");
- HDfprintf(stdout,
- " --delete Remove the user block from the input HDF5 file. The content\n");
- HDfprintf(stdout,
- " of the user block is discarded.\n");
- HDfprintf(stdout,
- " Cannot be used with the -u option.\n");
+ HDfprintf(stdout, "OPTIONS\n");
+ HDfprintf(stdout, " -i in_file.h5 Specifies the HDF5 as input. If the input HDF5 file\n");
+ HDfprintf(stdout, " contains no user block, exit with an error message.\n");
+ HDfprintf(stdout, " -o out_file.h5 Specifies output HDF5 file without a user block.\n");
+ HDfprintf(stdout, " If not specified, the user block will be removed from the\n");
+ HDfprintf(stdout, " input HDF5 file.\n");
+ HDfprintf(stdout, " -u out_user_file\n");
+ HDfprintf(stdout, " Specifies the output file containing the data from the\n");
+ HDfprintf(stdout, " user block.\n");
+ HDfprintf(stdout, " Cannot be used with --delete option.\n");
+ HDfprintf(stdout, " --delete Remove the user block from the input HDF5 file. The content\n");
+ HDfprintf(stdout, " of the user block is discarded.\n");
+ HDfprintf(stdout, " Cannot be used with the -u option.\n");
HDfprintf(stdout, "\n");
- HDfprintf(stdout,
- " -h Prints a usage message and exits.\n");
- HDfprintf(stdout,
- " -V Prints the HDF5 library version and exits.\n");
+ HDfprintf(stdout, " -h Prints a usage message and exits.\n");
+ HDfprintf(stdout, " -V Prints the HDF5 library version and exits.\n");
HDfprintf(stdout, "\n");
- HDfprintf(stdout,
- " If neither --delete nor -u is specified, the user block from the input file\n");
- HDfprintf(stdout,
- " will be displayed to stdout.\n");
+ HDfprintf(stdout, " If neither --delete nor -u is specified, the user block from the input file\n");
+ HDfprintf(stdout, " will be displayed to stdout.\n");
HDfprintf(stdout, "\n");
- HDfprintf(stdout,
- "Exit Status:\n");
- HDfprintf(stdout,
- " 0 Succeeded.\n");
- HDfprintf(stdout,
- " >0 An error occurred.\n");
+ HDfprintf(stdout, "Exit Status:\n");
+ HDfprintf(stdout, " 0 Succeeded.\n");
+ HDfprintf(stdout, " >0 An error occurred.\n");
}
/*-------------------------------------------------------------------------
@@ -127,9 +100,9 @@ parse_command_line(int argc, const char *argv[])
{
int opt = FALSE;
- /* parse command line options */
+ /* parse command line options */
while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF) {
- switch((char)opt) {
+ switch ((char)opt) {
case 'o':
output_file = HDstrdup(opt_arg);
if (output_file)
@@ -140,7 +113,8 @@ parse_command_line(int argc, const char *argv[])
input_file = HDstrdup(opt_arg);
if (input_file)
h5tools_set_input_file(input_file, 1);
- break;;
+ break;
+ ;
case 'u':
ub_file = HDstrdup(opt_arg);
@@ -160,7 +134,7 @@ parse_command_line(int argc, const char *argv[])
goto done;
case 'V':
- print_version (h5tools_getprogname());
+ print_version(h5tools_getprogname());
h5tools_setstatus(EXIT_SUCCESS);
goto done;
@@ -175,11 +149,11 @@ parse_command_line(int argc, const char *argv[])
return EXIT_SUCCESS;
done:
- if(input_file)
+ if (input_file)
HDfree(input_file);
- if(output_file)
+ if (output_file)
HDfree(output_file);
- if(ub_file)
+ if (ub_file)
HDfree(ub_file);
return EXIT_FAILURE;
@@ -188,8 +162,8 @@ done:
static void
leave(int ret)
{
- h5tools_close();
- HDexit(ret);
+ h5tools_close();
+ HDexit(ret);
}
/*-------------------------------------------------------------------------
@@ -204,14 +178,14 @@ leave(int ret)
int
main(int argc, const char *argv[])
{
- hid_t ifile = H5I_INVALID_HID;
- hid_t plist = H5I_INVALID_HID;
- off_t fsize;
- hsize_t usize;
- htri_t testval;
- herr_t status;
- int res;
- h5_stat_t sbuf;
+ hid_t ifile = H5I_INVALID_HID;
+ hid_t plist = H5I_INVALID_HID;
+ off_t fsize;
+ hsize_t usize;
+ htri_t testval;
+ herr_t status;
+ int res;
+ h5_stat_t sbuf;
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
@@ -219,7 +193,7 @@ main(int argc, const char *argv[])
/* Initialize h5tools lib */
h5tools_init();
- if(EXIT_FAILURE == parse_command_line(argc, argv))
+ if (EXIT_FAILURE == parse_command_line(argc, argv))
goto done;
/* enable error reporting if command line option */
@@ -237,12 +211,12 @@ main(int argc, const char *argv[])
if (testval <= 0) {
error_msg("Input HDF5 file \"%s\" is not HDF\n", input_file);
- help_ref_msg (stderr);
+ help_ref_msg(stderr);
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
- ifile = H5Fopen(input_file, H5F_ACC_RDONLY , H5P_DEFAULT);
+ ifile = H5Fopen(input_file, H5F_ACC_RDONLY, H5P_DEFAULT);
if (ifile < 0) {
error_msg("Can't open input HDF5 file \"%s\"\n", input_file);
@@ -257,7 +231,7 @@ main(int argc, const char *argv[])
goto done;
}
- status = H5Pget_userblock(plist, & usize);
+ status = H5Pget_userblock(plist, &usize);
if (status < 0) {
error_msg("Can't get user block for file \"%s\"\n", input_file);
h5tools_setstatus(EXIT_FAILURE);
@@ -268,14 +242,14 @@ main(int argc, const char *argv[])
H5Fclose(ifile);
if (usize == 0) {
- /* no user block to remove: message? */
+ /* no user block to remove: message? */
error_msg("\"%s\" has no user block: no change to file\n", input_file);
h5tools_setstatus(EXIT_SUCCESS);
goto done;
}
res = HDfstat(HDfileno(rawinstream), &sbuf);
- if(res < 0) {
+ if (res < 0) {
error_msg("Can't stat file \"%s\"\n", input_file);
h5tools_setstatus(EXIT_FAILURE);
goto done;
@@ -290,14 +264,14 @@ main(int argc, const char *argv[])
}
if (output_file == NULL) {
- error_msg("unable to open output HDF5 file \"%s\"\n", input_file);
- h5tools_setstatus(EXIT_FAILURE);
- goto done;
+ error_msg("unable to open output HDF5 file \"%s\"\n", input_file);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
/* copy from 0 to 'usize - 1' into ufid */
if (!do_delete) {
- if(copy_to_file(rawinstream, rawoutstream, 0, (ssize_t) usize) < 0) {
+ if (copy_to_file(rawinstream, rawoutstream, 0, (ssize_t)usize) < 0) {
error_msg("unable to copy user block to output file \"%s\"\n", ub_file);
h5tools_setstatus(EXIT_FAILURE);
goto done;
@@ -306,20 +280,20 @@ main(int argc, const char *argv[])
/* copy from usize to end of file into h5fid,
* starting at end of user block if present */
- if(copy_to_file(rawinstream, rawdatastream, (ssize_t) usize, (ssize_t)(fsize - (ssize_t)usize)) < 0) {
+ if (copy_to_file(rawinstream, rawdatastream, (ssize_t)usize, (ssize_t)(fsize - (ssize_t)usize)) < 0) {
error_msg("unable to copy hdf5 data to output file \"%s\"\n", output_file);
h5tools_setstatus(EXIT_FAILURE);
goto done;
}
done:
- if(input_file)
+ if (input_file)
HDfree(input_file);
- if(output_file)
+ if (output_file)
HDfree(output_file);
- if(ub_file) {
+ if (ub_file) {
HDfree(ub_file);
}
@@ -334,17 +308,17 @@ done:
*-------------------------------------------------------------------------
*/
herr_t
-copy_to_file( FILE *infid, FILE *ofid, ssize_t _where, ssize_t show_much )
+copy_to_file(FILE *infid, FILE *ofid, ssize_t _where, ssize_t show_much)
{
static char buf[COPY_BUF_SIZE];
- size_t how_much;
- off_t where = (off_t)_where;
- off_t to;
- off_t from;
- herr_t ret_value = 0;
+ size_t how_much;
+ off_t where = (off_t)_where;
+ off_t to;
+ off_t from;
+ herr_t ret_value = 0;
/* nothing to copy */
- if(show_much <= 0)
+ if (show_much <= 0)
goto done;
how_much = (size_t)show_much;
@@ -352,27 +326,27 @@ copy_to_file( FILE *infid, FILE *ofid, ssize_t _where, ssize_t show_much )
HDfseek(infid, 0L, 0);
from = where;
- to = 0;
- while(how_much > 0) {
- size_t bytes_in = 0; /* # of bytes to read */
- size_t bytes_read = 0; /* # of bytes actually read */
- size_t bytes_wrote = 0; /* # of bytes written */
+ to = 0;
+ while (how_much > 0) {
+ size_t bytes_in = 0; /* # of bytes to read */
+ size_t bytes_read = 0; /* # of bytes actually read */
+ size_t bytes_wrote = 0; /* # of bytes written */
if (how_much > COPY_BUF_SIZE)
bytes_in = COPY_BUF_SIZE;
else
bytes_in = how_much;
- /* Seek to correct position in input file */
+ /* Seek to correct position in input file */
HDfseek(infid, from, SEEK_SET);
/* Read data to buffer */
bytes_read = HDfread(buf, (size_t)1, bytes_in, infid);
- if(0 == bytes_read && HDferror(infid)) {
+ if (0 == bytes_read && HDferror(infid)) {
ret_value = -1;
goto done;
} /* end if */
- if(0 == bytes_read && HDfeof(infid)) {
+ if (0 == bytes_read && HDfeof(infid)) {
goto done;
} /* end if */
@@ -384,15 +358,14 @@ copy_to_file( FILE *infid, FILE *ofid, ssize_t _where, ssize_t show_much )
from += (off_t)bytes_read;
to += (off_t)bytes_read;
- /* Write nchars bytes to output file */
+ /* Write nchars bytes to output file */
bytes_wrote = HDfwrite(buf, (size_t)1, bytes_read, ofid);
- if(bytes_wrote != bytes_read || (0 == bytes_wrote && HDferror(ofid))) { /* error */
+ if (bytes_wrote != bytes_read || (0 == bytes_wrote && HDferror(ofid))) { /* error */
ret_value = -1;
goto done;
} /* end if */
- } /* end while */
+ } /* end while */
done:
return ret_value;
-} /* end copy_to_file */
-
+} /* end copy_to_file */