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-rw-r--r--tools/src/h5jam/CMakeLists.txt2
-rw-r--r--tools/src/h5jam/Makefile.in62
-rw-r--r--tools/src/h5jam/h5jam.c88
-rw-r--r--tools/src/h5jam/h5unjam.c24
4 files changed, 97 insertions, 79 deletions
diff --git a/tools/src/h5jam/CMakeLists.txt b/tools/src/h5jam/CMakeLists.txt
index f430417..69d4c4d 100644
--- a/tools/src/h5jam/CMakeLists.txt
+++ b/tools/src/h5jam/CMakeLists.txt
@@ -1,4 +1,4 @@
-cmake_minimum_required (VERSION 3.10)
+cmake_minimum_required (VERSION 3.12)
project (HDF5_TOOLS_SRC_H5JAM C)
# --------------------------------------------------------------------
diff --git a/tools/src/h5jam/Makefile.in b/tools/src/h5jam/Makefile.in
index f16372a..9e6c6dc 100644
--- a/tools/src/h5jam/Makefile.in
+++ b/tools/src/h5jam/Makefile.in
@@ -423,15 +423,15 @@ AMTAR = @AMTAR@
# H5_CFLAGS holds flags that should be used when building hdf5,
# but which should not be exported to h5cc for building other programs.
-# AM_CFLAGS is an automake construct which should be used by Makefiles
+# AM_CFLAGS is an automake construct which should be used by Makefiles
# instead of CFLAGS, as CFLAGS is reserved solely for the user to define.
# This applies to FCFLAGS, CXXFLAGS, CPPFLAGS, and LDFLAGS as well.
-AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@
+AM_CFLAGS = @AM_CFLAGS@ @H5_CFLAGS@ @H5_ECFLAGS@
# Include src and tools/lib directories
AM_CPPFLAGS = @AM_CPPFLAGS@ @H5_CPPFLAGS@ -I$(top_srcdir)/src \
-I$(top_srcdir)/tools/lib
-AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@
+AM_CXXFLAGS = @AM_CXXFLAGS@ @H5_CXXFLAGS@ @H5_ECXXFLAGS@
AM_DEFAULT_VERBOSITY = @AM_DEFAULT_VERBOSITY@
AM_FCFLAGS = @AM_FCFLAGS@ @H5_FCFLAGS@
AM_JAVACFLAGS = @AM_JAVACFLAGS@
@@ -451,6 +451,7 @@ CC = @CC@
CCDEPMODE = @CCDEPMODE@
CC_VERSION = @CC_VERSION@
CFLAGS = @CFLAGS@
+CLANG_SANITIZE_CHECKS = @CLANG_SANITIZE_CHECKS@
CODESTACK = @CODESTACK@
CONFIG_DATE = @CONFIG_DATE@
CONFIG_MODE = @CONFIG_MODE@
@@ -467,6 +468,7 @@ DEFAULT_API_VERSION = @DEFAULT_API_VERSION@
DEFS = @DEFS@
DEPDIR = @DEPDIR@
DEPRECATED_SYMBOLS = @DEPRECATED_SYMBOLS@
+DESIRED_FILE_LOCKING = @DESIRED_FILE_LOCKING@
DEV_WARNINGS = @DEV_WARNINGS@
DIRECT_VFD = @DIRECT_VFD@
DLLTOOL = @DLLTOOL@
@@ -503,8 +505,11 @@ H5_CFLAGS = @H5_CFLAGS@
H5_CLASSPATH = @H5_CLASSPATH@
H5_CPPFLAGS = @H5_CPPFLAGS@
H5_CXXFLAGS = @H5_CXXFLAGS@
+H5_ECFLAGS = @H5_ECFLAGS@
+H5_ECXXFLAGS = @H5_ECXXFLAGS@
H5_FCFLAGS = @H5_FCFLAGS@
H5_FORTRAN_SHARED = @H5_FORTRAN_SHARED@
+H5_IS_DARWIN = @H5_IS_DARWIN@
H5_JAVACFLAGS = @H5_JAVACFLAGS@
H5_JAVAFLAGS = @H5_JAVAFLAGS@
H5_JNIFLAGS = @H5_JNIFLAGS@
@@ -527,6 +532,7 @@ HL = @HL@
HL_FOR = @HL_FOR@
HSIZE_T = @HSIZE_T@
HSSIZE_T = @HSSIZE_T@
+IGNORE_DISABLED_FILE_LOCKS = @IGNORE_DISABLED_FILE_LOCKS@
INSTALL = @INSTALL@
INSTALL_DATA = @INSTALL_DATA@
INSTALL_PROGRAM = @INSTALL_PROGRAM@
@@ -563,6 +569,7 @@ MAINT = @MAINT@
MAKEINFO = @MAKEINFO@
MANIFEST_TOOL = @MANIFEST_TOOL@
MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@
+MIRROR_VFD = @MIRROR_VFD@
MKDIR_P = @MKDIR_P@
MPE = @MPE@
NM = @NM@
@@ -622,6 +629,7 @@ TIME = @TIME@
TR = @TR@
TRACE_API = @TRACE_API@
UNAME_INFO = @UNAME_INFO@
+USE_FILE_LOCKING = @USE_FILE_LOCKING@
USE_FILTER_DEFLATE = @USE_FILTER_DEFLATE@
USE_FILTER_SZIP = @USE_FILTER_SZIP@
USINGMEMCHECKER = @USINGMEMCHECKER@
@@ -657,6 +665,7 @@ docdir = $(exec_prefix)/doc
dvidir = @dvidir@
enable_shared = @enable_shared@
enable_static = @enable_static@
+examplesdir = @examplesdir@
exec_prefix = @exec_prefix@
fortran_linux_linker_option = @fortran_linux_linker_option@
host = @host@
@@ -713,15 +722,15 @@ LIBH5_HL = $(top_builddir)/hl/src/libhdf5_hl.la
LIBH5F_HL = $(top_builddir)/hl/fortran/src/libhdf5hl_fortran.la
LIBH5CPP_HL = $(top_builddir)/hl/c++/src/libhdf5_hl_cpp.la
-# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below
-# has been removed. According to the official description of DESTDIR by Gnu at
-# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is
-# prepended to the normal and complete install path that it precedes for the
-# purpose of installing in a temporary directory which is useful for building
-# rpms and other packages. The '/' after ${DESTDIR} will be followed by another
-# '/' at the beginning of the normal install path. When DESTDIR is empty the
-# path then begins with '//', which is incorrect and causes problems at least for
-# Cygwin.
+# Note that in svn revision 19400 the '/' after DESTDIR in H5* variables below
+# has been removed. According to the official description of DESTDIR by Gnu at
+# http://www.gnu.org/prep/standards/html_node/DESTDIR.html, DESTDIR is
+# prepended to the normal and complete install path that it precedes for the
+# purpose of installing in a temporary directory which is useful for building
+# rpms and other packages. The '/' after ${DESTDIR} will be followed by another
+# '/' at the beginning of the normal install path. When DESTDIR is empty the
+# path then begins with '//', which is incorrect and causes problems at least for
+# Cygwin.
# Scripts used to build examples
# If only shared libraries have been installed, have h5cc build examples with
@@ -760,7 +769,7 @@ LIB = $(lib_LIBRARIES) $(lib_LTLIBRARIES) $(noinst_LIBRARIES) \
PROGS = $(bin_PROGRAMS) $(bin_SCRIPTS) $(noinst_PROGRAMS) $(noinst_SCRIPTS) \
$(EXTRA_PROG)
-chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST)
+chk_TESTS = $(check_PROGRAMS) $(check_SCRIPTS) $(EXTRA_TEST)
TEST_EXTENSIONS = .sh
SH_LOG_COMPILER = $(SHELL)
AM_SH_LOG_FLAGS =
@@ -1362,28 +1371,37 @@ $(TEST_PROG_CHKEXE) $(TEST_PROG_PARA_CHKEXE) dummy.chkexe_:
echo "============================" > $${log}; \
fi; \
if test "X$(FORTRAN_API)" = "Xyes"; then \
- echo "Fortran API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Fortran API: Testing $${tname} $(TEST_FLAGS)"; \
if test -n "$(REALTIMEOUTPUT)"; then \
- echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" | tee -a $${log}; \
+ echo "Fortran API: Test log for $${tname} $(TEST_FLAGS)" | tee -a $${log}; \
else \
- echo "Fortran API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ echo "Fortran API: Test log for $${tname} $(TEST_FLAGS)" >> $${log}; \
fi; \
elif test "X$(CXX_API)" = "Xyes"; then \
- echo "C++ API: Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "C++ API: Testing $${tname} $(TEST_FLAGS)"; \
if test -n "$(REALTIMEOUTPUT)"; then \
- echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" | tee -a $${log};\
+ echo "C++ API: Test log for $${tname} $(TEST_FLAGS)" | tee -a $${log};\
else \
- echo "C++ API: $(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log};\
+ echo "C++ API: Test log for $${tname} $(TEST_FLAGS)" >> $${log};\
fi; \
else \
- echo "Testing $(HDF5_DRIVER) $${tname} $(TEST_FLAGS)"; \
+ echo "Testing: $${tname} $(TEST_FLAGS)"; \
if test -n "$(REALTIMEOUTPUT)"; then \
- echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" | tee -a $${log}; \
+ echo "Test log for $${tname} $(TEST_FLAGS)" | tee -a $${log}; \
else \
- echo "$(HDF5_DRIVER) $${tname} $(TEST_FLAGS) Test Log" >> $${log}; \
+ echo "Test log for $${tname} $(TEST_FLAGS)" >> $${log}; \
fi; \
fi; \
if test -n "$(REALTIMEOUTPUT)"; then \
+ if test -n "$(HDF5_DRIVER)"; then \
+ echo "Virtual file driver (VFD): $(HDF5_DRIVER)" | tee -a $${log}; \
+ fi; \
+ else \
+ if test -n "$(HDF5_DRIVER)"; then \
+ echo "Virtual file driver (VFD): $(HDF5_DRIVER)" >> $${log}; \
+ fi; \
+ fi; \
+ if test -n "$(REALTIMEOUTPUT)"; then \
echo "============================" | tee -a $${log}; \
else \
echo "============================" >> $${log}; \
diff --git a/tools/src/h5jam/h5jam.c b/tools/src/h5jam/h5jam.c
index 4f3e7a4..56ed66b 100644
--- a/tools/src/h5jam/h5jam.c
+++ b/tools/src/h5jam/h5jam.c
@@ -120,13 +120,6 @@ usage (const char *prog)
static void
leave(int ret)
{
- if (ub_file)
- HDfree (ub_file);
- if (input_file)
- HDfree (input_file);
- if (output_file)
- HDfree (output_file);
-
h5tools_close();
HDexit(ret);
@@ -148,7 +141,7 @@ parse_command_line (int argc, const char *argv[])
int opt = FALSE;
/* parse command line options */
- while ((opt = get_option (argc, argv, s_opts, l_opts)) != EOF)
+ while ((opt = get_option(argc, argv, s_opts, l_opts)) != EOF)
{
switch ((char) opt)
{
@@ -195,10 +188,8 @@ main (int argc, const char *argv[])
int ufid = -1;
int h5fid = -1;
int ofid = -1;
- void *edata;
- H5E_auto2_t func;
- hid_t ifile = -1;
- hid_t plist = -1;
+ hid_t ifile = H5I_INVALID_HID;
+ hid_t plist = H5I_INVALID_HID;
herr_t status;
htri_t testval;
hsize_t usize;
@@ -214,20 +205,20 @@ main (int argc, const char *argv[])
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
- /* Disable error reporting */
- H5Eget_auto2(H5E_DEFAULT, &func, &edata);
- H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
-
/* Initialize h5tools lib */
h5tools_init();
parse_command_line(argc, argv);
+ /* enable error reporting if command line option */
+ h5tools_error_report();
+
if (ub_file == NULL) {
/* no user block */
error_msg("missing argument for -u <user_file>.\n");
help_ref_msg(stderr);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
testval = H5Fis_hdf5 (ub_file);
@@ -235,13 +226,15 @@ main (int argc, const char *argv[])
if (testval > 0) {
error_msg("-u <user_file> cannot be HDF5 file, but it appears to be an HDF5 file.\n");
help_ref_msg(stderr);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
if (input_file == NULL) {
error_msg("missing argument for -i <HDF5 file>.\n");
help_ref_msg(stderr);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
testval = H5Fis_hdf5 (input_file);
@@ -249,45 +242,49 @@ main (int argc, const char *argv[])
if (testval <= 0) {
error_msg("Input HDF5 file \"%s\" is not HDF5 format.\n", input_file);
help_ref_msg(stderr);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
ifile = H5Fopen(input_file, H5F_ACC_RDONLY, H5P_DEFAULT);
if (ifile < 0) {
error_msg("Can't open input HDF5 file \"%s\"\n", input_file);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
plist = H5Fget_create_plist(ifile);
if (plist < 0) {
error_msg("Can't get file creation plist for file \"%s\"\n", input_file);
- H5Fclose(ifile);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
status = H5Pget_userblock(plist, &usize);
if (status < 0) {
error_msg("Can't get user block for file \"%s\"\n", input_file);
- H5Pclose(plist);
- H5Fclose(ifile);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
H5Pclose(plist);
+ plist = H5I_INVALID_HID;
H5Fclose(ifile);
+ ifile = H5I_INVALID_HID;
ufid = HDopen(ub_file, O_RDONLY);
if(ufid < 0) {
error_msg("unable to open user block file \"%s\"\n", ub_file);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
res = HDfstat(ufid, &sbuf);
if(res < 0) {
error_msg("Can't stat file \"%s\"\n", ub_file);
- HDclose (ufid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
fsize = (off_t)sbuf.st_size;
@@ -295,16 +292,15 @@ main (int argc, const char *argv[])
h5fid = HDopen(input_file, O_RDONLY);
if(h5fid < 0) {
error_msg("unable to open HDF5 file for read \"%s\"\n", input_file);
- HDclose (ufid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
res = HDfstat(h5fid, &sbuf2);
if(res < 0) {
error_msg("Can't stat file \"%s\"\n", input_file);
- HDclose (h5fid);
- HDclose (ufid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
h5fsize = (hsize_t)sbuf2.st_size;
@@ -314,9 +310,8 @@ main (int argc, const char *argv[])
if (ofid < 0) {
error_msg("unable to open output file \"%s\"\n", output_file);
- HDclose (h5fid);
- HDclose (ufid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
}
else {
@@ -324,9 +319,8 @@ main (int argc, const char *argv[])
if (ofid < 0) {
error_msg("unable to create output file \"%s\"\n", output_file);
- HDclose (h5fid);
- HDclose (ufid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
}
}
@@ -365,12 +359,11 @@ main (int argc, const char *argv[])
/* pad the ub */
if(write_pad(ofid, where, &where) < 0) {
error_msg("Can't pad file \"%s\"\n", output_file);
- HDclose (h5fid);
- HDclose (ufid);
- HDclose (ofid);
- leave (EXIT_FAILURE);
+ h5tools_setstatus(EXIT_FAILURE);
+ goto done;
} /* end if */
+done:
if(ub_file)
HDfree(ub_file);
if(input_file)
@@ -378,6 +371,11 @@ main (int argc, const char *argv[])
if(output_file)
HDfree(output_file);
+ if(plist >= 0)
+ H5Pclose(plist);
+ if(ifile >= 0)
+ H5Fclose(ifile);
+
if(ufid >= 0)
HDclose(ufid);
if(h5fid >= 0)
@@ -385,7 +383,7 @@ main (int argc, const char *argv[])
if(ofid >= 0)
HDclose(ofid);
- return h5tools_getstatus();
+ leave(h5tools_getstatus());
}
/*-------------------------------------------------------------------------
diff --git a/tools/src/h5jam/h5unjam.c b/tools/src/h5jam/h5unjam.c
index ffe2aca..c6bf498 100644
--- a/tools/src/h5jam/h5unjam.c
+++ b/tools/src/h5jam/h5unjam.c
@@ -185,6 +185,13 @@ done:
return EXIT_FAILURE;
}
+static void
+leave(int ret)
+{
+ h5tools_close();
+ HDexit(ret);
+}
+
/*-------------------------------------------------------------------------
* Function: main
*
@@ -197,10 +204,8 @@ done:
int
main(int argc, const char *argv[])
{
- void *edata;
- H5E_auto2_t func;
- hid_t ifile = -1;
- hid_t plist = -1;
+ hid_t ifile = H5I_INVALID_HID;
+ hid_t plist = H5I_INVALID_HID;
off_t fsize;
hsize_t usize;
htri_t testval;
@@ -211,16 +216,15 @@ main(int argc, const char *argv[])
h5tools_setprogname(PROGRAMNAME);
h5tools_setstatus(EXIT_SUCCESS);
- /* Disable error reporting */
- H5Eget_auto2(H5E_DEFAULT, &func, &edata);
- H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
-
/* Initialize h5tools lib */
h5tools_init();
if(EXIT_FAILURE == parse_command_line(argc, argv))
goto done;
+ /* enable error reporting if command line option */
+ h5tools_error_report();
+
if (input_file == NULL) {
/* no user block */
error_msg("missing argument for HDF5 file input.\n");
@@ -319,9 +323,7 @@ done:
HDfree(ub_file);
}
- h5tools_close();
-
- return h5tools_getstatus();
+ leave(h5tools_getstatus());
}
/*-------------------------------------------------------------------------
generated by cgit v0.12 at 2024-08-22 05:54:15 (GMT)