diff options
Diffstat (limited to 'tools/src/h5ls/h5ls.c')
| -rw-r--r-- | tools/src/h5ls/h5ls.c | 1227 |
1 files changed, 629 insertions, 598 deletions
diff --git a/tools/src/h5ls/h5ls.c b/tools/src/h5ls/h5ls.c index 0a641eb..9ebd4d5 100644 --- a/tools/src/h5ls/h5ls.c +++ b/tools/src/h5ls/h5ls.c @@ -16,7 +16,6 @@ * Monday, March 23, 1998 */ - /* * We include the private header file so we can get to the uniform * programming environment it declares. Other than that, h5ls only calls @@ -31,111 +30,112 @@ /* Name of tool */ #define PROGRAMNAME "h5ls" -#define NAME_BUF_SIZE 2048 +#define NAME_BUF_SIZE 2048 /* * Alternative formating for data dumped by H5LS * * This table only affects H5LS output. */ -static h5tool_format_t ls_dataformat = { - 0, /*raw */ - - "", /*fmt_raw */ - "%d", /*fmt_int */ - "%u", /*fmt_uint */ - "%hhd", /*fmt_schar */ - "%u", /*fmt_uchar */ - "%d", /*fmt_short */ - "%u", /*fmt_ushort */ - "%ld", /*fmt_long */ - "%lu", /*fmt_ulong */ - NULL, /*fmt_llong */ - NULL, /*fmt_ullong */ - "%g", /*fmt_double */ - "%g", /*fmt_float */ - - 0, /*ascii */ - 0, /*str_locale */ - 0, /*str_repeat */ - - "[", /*arr_pre */ - ",", /*arr_sep */ - "]", /*arr_suf */ - 1, /*arr_linebreak */ - - "", /*cmpd_name */ - ",", /*cmpd_sep */ - "{", /*cmpd_pre */ - "}", /*cmpd_suf */ - "", /*cmpd_end */ - NULL, /* cmpd_listv */ - - ",", /*vlen_sep */ - "(", /*vlen_pre */ - ")", /*vlen_suf */ - "", /*vlen_end */ - - "%s", /*elmt_fmt */ - ",", /*elmt_suf1 */ - " ", /*elmt_suf2 */ - - HSIZE_T_FORMAT, /*idx_n_fmt */ - ",", /*idx_sep */ - "(%s)", /*idx_fmt */ - - 65535, /*line_ncols *//*standard default columns */ - 0, /*line_per_line */ - "", /*line_pre */ - "%s", /*line_1st */ - "%s", /*line_cont */ - "", /*line_suf */ - "", /*line_sep */ - 1, /*line_multi_new */ - " ", /*line_indent */ - - 0, /*skip_first */ - - 0, /*obj_hidefileno */ - "-%lu:%" PRIuHADDR, /*obj_format */ - - 0, /*dset_hidefileno */ - "DSET-%s ", /*dset_format */ - "%sBlk%lu: ", /*dset_blockformat_pre */ - "%sPt%lu: ", /*dset_ptformat_pre */ - "%s", /*dset_ptformat */ - 1, /*array indices */ - 1 /*escape non printable characters */ +static h5tool_format_t ls_dataformat = { + 0, /*raw */ + + "", /*fmt_raw */ + "%d", /*fmt_int */ + "%u", /*fmt_uint */ + "%hhd", /*fmt_schar */ + "%u", /*fmt_uchar */ + "%d", /*fmt_short */ + "%u", /*fmt_ushort */ + "%ld", /*fmt_long */ + "%lu", /*fmt_ulong */ + NULL, /*fmt_llong */ + NULL, /*fmt_ullong */ + "%g", /*fmt_double */ + "%g", /*fmt_float */ + + 0, /*ascii */ + 0, /*str_locale */ + 0, /*str_repeat */ + + "[", /*arr_pre */ + ",", /*arr_sep */ + "]", /*arr_suf */ + 1, /*arr_linebreak */ + + "", /*cmpd_name */ + ",", /*cmpd_sep */ + "{", /*cmpd_pre */ + "}", /*cmpd_suf */ + "", /*cmpd_end */ + NULL, /* cmpd_listv */ + + ",", /*vlen_sep */ + "(", /*vlen_pre */ + ")", /*vlen_suf */ + "", /*vlen_end */ + + "%s", /*elmt_fmt */ + ",", /*elmt_suf1 */ + " ", /*elmt_suf2 */ + + HSIZE_T_FORMAT, /*idx_n_fmt */ + ",", /*idx_sep */ + "(%s)", /*idx_fmt */ + + 65535, + /*line_ncols */ /*standard default columns */ + 0, /*line_per_line */ + "", /*line_pre */ + "%s", /*line_1st */ + "%s", /*line_cont */ + "", /*line_suf */ + "", /*line_sep */ + 1, /*line_multi_new */ + " ", /*line_indent */ + + 0, /*skip_first */ + + 0, /*obj_hidefileno */ + "-%lu:%" PRIuHADDR, /*obj_format */ + + 0, /*dset_hidefileno */ + "DSET-%s ", /*dset_format */ + "%sBlk%lu: ", /*dset_blockformat_pre */ + "%sPt%lu: ", /*dset_ptformat_pre */ + "%s", /*dset_ptformat */ + 1, /*array indices */ + 1 /*escape non printable characters */ }; /* Struct to pass through to visitors */ typedef struct { - const char *fname; /* Filename */ - hid_t fid; /* File ID */ - hid_t gid; /* Group ID */ - hbool_t symlink_target; /* Whether this is the target of an symbolic link */ - symlink_trav_t *symlink_list; /* List of visited symbolic links */ - size_t base_len; /* Length of base path name, if not root */ - size_t name_start; /* # of leading characters to strip off path names on output */ -}iter_t; + const char * fname; /* Filename */ + hid_t fid; /* File ID */ + hid_t gid; /* Group ID */ + hbool_t symlink_target; /* Whether this is the target of an symbolic link */ + symlink_trav_t *symlink_list; /* List of visited symbolic links */ + size_t base_len; /* Length of base path name, if not root */ + size_t name_start; /* # of leading characters to strip off path names on output */ +} iter_t; /* Command-line switches */ -static int verbose_g = 0; /* lots of extra output */ -static int width_g = 80; /* output width in characters */ -static hbool_t address_g = FALSE; /* print raw data addresses */ -static hbool_t data_g = FALSE; /* display dataset values? */ -static hbool_t label_g = FALSE; /* label compound values? */ -static hbool_t string_g = FALSE; /* print 1-byte numbers as ASCII? */ -static hbool_t fullname_g = FALSE; /* print full path names */ -static hbool_t recursive_g = FALSE; /* recursive descent listing */ -static hbool_t follow_symlink_g = FALSE; /* follow symbolic links */ -static hbool_t no_dangling_link_g = FALSE; /* treat dangling link is error */ -static hbool_t follow_elink_g = FALSE; /* follow external links */ -static hbool_t grp_literal_g = FALSE; /* list group, not contents */ -static hbool_t hexdump_g = FALSE; /* show data as raw hexadecimal */ -static hbool_t simple_output_g = FALSE; /* make output more machine-readable */ -static hbool_t show_file_name_g = FALSE; /* show file name for full names */ -static hbool_t no_line_wrap_g = FALSE; /* show data content without line wrap */ -static hbool_t display_root_g = FALSE; /* show root group in output? */ +static int verbose_g = 0; /* lots of extra output */ +static int width_g = 80; /* output width in characters */ +static hbool_t address_g = FALSE; /* print raw data addresses */ +static hbool_t data_g = FALSE; /* display dataset values? */ +static hbool_t label_g = FALSE; /* label compound values? */ +static hbool_t string_g = FALSE; /* print 1-byte numbers as ASCII? */ +static hbool_t fullname_g = FALSE; /* print full path names */ +static hbool_t recursive_g = FALSE; /* recursive descent listing */ +static hbool_t follow_symlink_g = FALSE; /* follow symbolic links */ +static hbool_t no_dangling_link_g = FALSE; /* treat dangling link is error */ +static hbool_t follow_elink_g = FALSE; /* follow external links */ +static hbool_t grp_literal_g = FALSE; /* list group, not contents */ +static hbool_t hexdump_g = FALSE; /* show data as raw hexadecimal */ +static hbool_t simple_output_g = FALSE; /* make output more machine-readable */ +static hbool_t show_file_name_g = FALSE; /* show file name for full names */ +static hbool_t no_line_wrap_g = FALSE; /* show data content without line wrap */ +static hbool_t display_root_g = FALSE; /* show root group in output? */ /* Information about how to display each type of object */ static struct dispatch_t { @@ -146,17 +146,17 @@ static struct dispatch_t { herr_t (*list2)(hid_t obj, const char *name); } dispatch_g[H5O_TYPE_NTYPES]; -#define DISPATCH(TYPE, NAME, LIST1, LIST2) { \ - dispatch_g[TYPE].name = (NAME); \ - dispatch_g[TYPE].list1 = (LIST1); \ - dispatch_g[TYPE].list2 = (LIST2); \ -} +#define DISPATCH(TYPE, NAME, LIST1, LIST2) \ + { \ + dispatch_g[TYPE].name = (NAME); \ + dispatch_g[TYPE].list1 = (LIST1); \ + dispatch_g[TYPE].list2 = (LIST2); \ + } -static void print_type(h5tools_str_t *buffer, hid_t type, int ind); +static void print_type(h5tools_str_t *buffer, hid_t type, int ind); static hbool_t print_int_type(h5tools_str_t *buffer, hid_t type, int ind); static hbool_t print_float_type(h5tools_str_t *buffer, hid_t type, int ind); -static herr_t visit_obj(hid_t file, const char *oname, iter_t *iter); - +static herr_t visit_obj(hid_t file, const char *oname, iter_t *iter); /*------------------------------------------------------------------------- * Function: usage @@ -167,36 +167,46 @@ static herr_t visit_obj(hid_t file, const char *oname, iter_t *iter); *------------------------------------------------------------------------- */ static void -usage (void) +usage(void) { FLUSHSTREAM(rawoutstream); PRINTVALSTREAM(rawoutstream, "usage: h5ls [OPTIONS] file[/OBJECT] [file[/[OBJECT]...]\n"); PRINTVALSTREAM(rawoutstream, " OPTIONS\n"); PRINTVALSTREAM(rawoutstream, " -h, -?, --help Print a usage message and exit\n"); - PRINTVALSTREAM(rawoutstream, " -a, --address Print raw data address. If dataset is contiguous, address\n"); - PRINTVALSTREAM(rawoutstream, " is offset in file of beginning of raw data. If chunked,\n"); - PRINTVALSTREAM(rawoutstream, " returned list of addresses indicates offset of each chunk.\n"); + PRINTVALSTREAM(rawoutstream, + " -a, --address Print raw data address. If dataset is contiguous, address\n"); + PRINTVALSTREAM(rawoutstream, + " is offset in file of beginning of raw data. If chunked,\n"); + PRINTVALSTREAM(rawoutstream, + " returned list of addresses indicates offset of each chunk.\n"); PRINTVALSTREAM(rawoutstream, " Must be used with -v, --verbose option.\n"); PRINTVALSTREAM(rawoutstream, " Provides no information for non-dataset objects.\n"); PRINTVALSTREAM(rawoutstream, " -d, --data Print the values of datasets\n"); PRINTVALSTREAM(rawoutstream, " --enable-error-stack\n"); - PRINTVALSTREAM(rawoutstream, " Prints messages from the HDF5 error stack as they occur.\n"); + PRINTVALSTREAM(rawoutstream, + " Prints messages from the HDF5 error stack as they occur.\n"); PRINTVALSTREAM(rawoutstream, " --follow-symlinks\n"); - PRINTVALSTREAM(rawoutstream, " Follow symbolic links (soft links and external links)\n"); + PRINTVALSTREAM(rawoutstream, + " Follow symbolic links (soft links and external links)\n"); PRINTVALSTREAM(rawoutstream, " to display target object information.\n"); PRINTVALSTREAM(rawoutstream, " Without this option, h5ls identifies a symbolic link\n"); PRINTVALSTREAM(rawoutstream, " as a soft link or external link and prints the value\n"); - PRINTVALSTREAM(rawoutstream, " assigned to the symbolic link; it does not provide any\n"); + PRINTVALSTREAM(rawoutstream, + " assigned to the symbolic link; it does not provide any\n"); PRINTVALSTREAM(rawoutstream, " information regarding the target object or determine\n"); PRINTVALSTREAM(rawoutstream, " whether the link is a dangling link.\n"); PRINTVALSTREAM(rawoutstream, " --no-dangling-links\n"); PRINTVALSTREAM(rawoutstream, " Must be used with --follow-symlinks option;\n"); - PRINTVALSTREAM(rawoutstream, " otherwise, h5ls shows error message and returns an exit\n"); + PRINTVALSTREAM(rawoutstream, + " otherwise, h5ls shows error message and returns an exit\n"); PRINTVALSTREAM(rawoutstream, " code of 1.\n"); - PRINTVALSTREAM(rawoutstream, " Check for any symbolic links (soft links or external links)\n"); - PRINTVALSTREAM(rawoutstream, " that do not resolve to an existing object (dataset, group,\n"); + PRINTVALSTREAM(rawoutstream, + " Check for any symbolic links (soft links or external links)\n"); + PRINTVALSTREAM(rawoutstream, + " that do not resolve to an existing object (dataset, group,\n"); PRINTVALSTREAM(rawoutstream, " or named datatype).\n"); - PRINTVALSTREAM(rawoutstream, " If any dangling link is found, this situation is treated\n"); + PRINTVALSTREAM(rawoutstream, + " If any dangling link is found, this situation is treated\n"); PRINTVALSTREAM(rawoutstream, " as an error and h5ls returns an exit code of 1.\n"); PRINTVALSTREAM(rawoutstream, " -f, --full Print full path names instead of base names\n"); PRINTVALSTREAM(rawoutstream, " -g, --group Show information about a group, not its contents\n"); @@ -209,20 +219,26 @@ usage (void) PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n"); PRINTVALSTREAM(rawoutstream, " --vfd=DRIVER Use the specified virtual file driver\n"); PRINTVALSTREAM(rawoutstream, " -x, --hexdump Show raw data in hexadecimal format\n"); - PRINTVALSTREAM(rawoutstream, " --s3-cred=C Supply S3 authentication information to \"ros3\" vfd.\n"); - PRINTVALSTREAM(rawoutstream, " Accepts tuple of \"(<aws-region>,<access-id>,<access-key>)\".\n"); - PRINTVALSTREAM(rawoutstream, " If absent or C->\"(,,)\", defaults to no-authentication.\n"); + PRINTVALSTREAM(rawoutstream, + " --s3-cred=C Supply S3 authentication information to \"ros3\" vfd.\n"); + PRINTVALSTREAM(rawoutstream, + " Accepts tuple of \"(<aws-region>,<access-id>,<access-key>)\".\n"); + PRINTVALSTREAM(rawoutstream, + " If absent or C->\"(,,)\", defaults to no-authentication.\n"); PRINTVALSTREAM(rawoutstream, " Has no effect if vfd flag not set to \"ros3\".\n"); PRINTVALSTREAM(rawoutstream, " --hdfs-attrs=A Supply configuration information to Hadoop VFD.\n"); PRINTVALSTREAM(rawoutstream, " Accepts tuple of (<namenode name>,<namenode port>,\n"); PRINTVALSTREAM(rawoutstream, " ...<kerberos cache path>,<username>,<buffer size>)\n"); - PRINTVALSTREAM(rawoutstream, " If absent or A == '(,,,,)', all default values are used.\n"); + PRINTVALSTREAM(rawoutstream, + " If absent or A == '(,,,,)', all default values are used.\n"); PRINTVALSTREAM(rawoutstream, " Has no effect if vfd flag is not 'hdfs'.\n"); - PRINTVALSTREAM(rawoutstream, " --vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, + " --vol-value Value (ID) of the VOL connector to use for opening the\n"); PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, " --vol-name Name of the VOL connector to use for opening the\n"); PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, + " --vol-info VOL-specific info to pass to the VOL connector used for\n"); PRINTVALSTREAM(rawoutstream, " opening the HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " file/OBJECT\n"); @@ -233,7 +249,8 @@ usage (void) PRINTVALSTREAM(rawoutstream, " \"%%05d\" to open a file family.\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " Deprecated Options\n"); - PRINTVALSTREAM(rawoutstream, " The following options have been removed in HDF5 1.12. Use the indicated\n"); + PRINTVALSTREAM(rawoutstream, + " The following options have been removed in HDF5 1.12. Use the indicated\n"); PRINTVALSTREAM(rawoutstream, " replacement option in all work.\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " -E or --external Follow external links.\n"); @@ -242,7 +259,6 @@ usage (void) PRINTVALSTREAM(rawoutstream, " Replaced by --enable-error-stack.\n"); } - /*------------------------------------------------------------------------- * Function: print_string * @@ -255,7 +271,7 @@ usage (void) static int print_string(h5tools_str_t *buffer, const char *s, hbool_t escape_spaces) { - int nprint=0; + int nprint = 0; for (/*void*/; s && *s; s++) { switch (*s) { @@ -314,7 +330,7 @@ print_string(h5tools_str_t *buffer, const char *s, hbool_t escape_spaces) } else { if (buffer) - h5tools_str_append(buffer, "\\%03o", *((const unsigned char*)s)); + h5tools_str_append(buffer, "\\%03o", *((const unsigned char *)s)); nprint += 4; } break; @@ -323,7 +339,6 @@ print_string(h5tools_str_t *buffer, const char *s, hbool_t escape_spaces) return nprint; } - /*------------------------------------------------------------------------- * Function: print_obj_name * @@ -336,9 +351,9 @@ print_string(h5tools_str_t *buffer, const char *s, hbool_t escape_spaces) static int print_obj_name(h5tools_str_t *buffer, const iter_t *iter, const char *oname, const char *s) { - static char fullname[NAME_BUF_SIZE]; /* Buffer for file and/or object name */ - const char *name = fullname; /* Pointer to buffer for printing */ - int n; + static char fullname[NAME_BUF_SIZE]; /* Buffer for file and/or object name */ + const char *name = fullname; /* Pointer to buffer for printing */ + int n; if (show_file_name_g) HDsnprintf(fullname, sizeof(fullname), "%s/%s", iter->fname, oname + iter->name_start); @@ -349,7 +364,7 @@ print_obj_name(h5tools_str_t *buffer, const iter_t *iter, const char *oname, con if (fullname_g) n = print_string(buffer, name, TRUE); else { - const char *last_sep; /* The location of the last group separator */ + const char *last_sep; /* The location of the last group separator */ /* Find the last component of the path name */ if (NULL == (last_sep = HDstrrchr(name, '/'))) @@ -364,7 +379,6 @@ print_obj_name(h5tools_str_t *buffer, const iter_t *iter, const char *oname, con return TRUE; } - /*------------------------------------------------------------------------- * Function: print_native_type * @@ -414,7 +428,7 @@ print_native_type(h5tools_str_t *buffer, hid_t type, int ind) else if (H5Tequal(type, H5T_NATIVE_DOUBLE) == TRUE) { h5tools_str_append(buffer, "native double"); } -#if H5_SIZEOF_LONG_DOUBLE !=0 +#if H5_SIZEOF_LONG_DOUBLE != 0 else if (H5Tequal(type, H5T_NATIVE_LDOUBLE) == TRUE) { h5tools_str_append(buffer, "native long double"); } @@ -525,7 +539,6 @@ print_native_type(h5tools_str_t *buffer, hid_t type, int ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_ieee_type * @@ -556,7 +569,6 @@ print_ieee_type(h5tools_str_t *buffer, hid_t type, int ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_precision * @@ -570,22 +582,22 @@ print_ieee_type(h5tools_str_t *buffer, hid_t type, int ind) static void print_precision(h5tools_str_t *buffer, hid_t type, int ind) { - size_t prec; /* precision */ - H5T_pad_t plsb, pmsb; /* lsb and msb padding */ - const char *plsb_s=NULL; /* lsb padding string */ - const char *pmsb_s=NULL; /* msb padding string */ - size_t nbits; /* number of bits */ + size_t prec; /* precision */ + H5T_pad_t plsb, pmsb; /* lsb and msb padding */ + const char *plsb_s = NULL; /* lsb padding string */ + const char *pmsb_s = NULL; /* msb padding string */ + size_t nbits; /* number of bits */ /* If the precision is less than the total size then show the precision * and offset on the following line. Also display the padding * information. */ if (8 * H5Tget_size(type) != (prec = H5Tget_precision(type))) { - h5tools_str_append(buffer, "\n%*s(%lu bit%s of precision beginning at bit %lu)", - ind, "", (unsigned long)prec, 1 == prec ? "" : "s", (unsigned long)H5Tget_offset(type)); + h5tools_str_append(buffer, "\n%*s(%lu bit%s of precision beginning at bit %lu)", ind, "", + (unsigned long)prec, 1 == prec ? "" : "s", (unsigned long)H5Tget_offset(type)); H5Tget_pad(type, &plsb, &pmsb); if (H5Tget_offset(type) > 0) { - switch(plsb) { + switch (plsb) { case H5T_PAD_ZERO: plsb_s = "zero"; break; @@ -604,7 +616,7 @@ print_precision(h5tools_str_t *buffer, hid_t type, int ind) } } if ((unsigned)H5Tget_offset(type) + prec < 8 * H5Tget_size(type)) { - switch(pmsb) { + switch (pmsb) { case H5T_PAD_ZERO: pmsb_s = "zero"; break; @@ -626,20 +638,21 @@ print_precision(h5tools_str_t *buffer, hid_t type, int ind) h5tools_str_append(buffer, "\n%*s(", ind, ""); if (plsb_s) { nbits = (unsigned)H5Tget_offset(type); - h5tools_str_append(buffer, "%lu %s bit%s at bit 0", (unsigned long)nbits, plsb_s, 1 == nbits ? "" : "s"); + h5tools_str_append(buffer, "%lu %s bit%s at bit 0", (unsigned long)nbits, plsb_s, + 1 == nbits ? "" : "s"); } if (plsb_s && pmsb_s) h5tools_str_append(buffer, ", "); if (pmsb_s) { nbits = (8 * H5Tget_size(type)) - ((unsigned)H5Tget_offset(type) + prec); - h5tools_str_append(buffer, "%lu %s bit%s at bit %lu", (unsigned long)nbits, pmsb_s, 1 == nbits ? "" : "s", (unsigned long)(8 * H5Tget_size(type) - nbits)); + h5tools_str_append(buffer, "%lu %s bit%s at bit %lu", (unsigned long)nbits, pmsb_s, + 1 == nbits ? "" : "s", (unsigned long)(8 * H5Tget_size(type) - nbits)); } h5tools_str_append(buffer, ")"); } } } - /*------------------------------------------------------------------------- * Function: print_int_type * @@ -655,10 +668,10 @@ print_precision(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_int_type(h5tools_str_t *buffer, hid_t type, int ind) { - H5T_order_t order; /* byte order value */ - const char *order_s = NULL; /* byte order string */ - H5T_sign_t sign; /* sign scheme value */ - const char *sign_s = NULL; /* sign scheme string */ + H5T_order_t order; /* byte order value */ + const char *order_s = NULL; /* byte order string */ + H5T_sign_t sign; /* sign scheme value */ + const char *sign_s = NULL; /* sign scheme string */ if (H5T_INTEGER != H5Tget_class(type)) return FALSE; @@ -701,12 +714,12 @@ print_int_type(h5tools_str_t *buffer, hid_t type, int ind) /* Print size, order, and sign on first line, precision and padding * information on the subsequent lines */ - h5tools_str_append(buffer, "%lu-bit%s%s integer", (unsigned long)(8*H5Tget_size(type)), order_s, sign_s); + h5tools_str_append(buffer, "%lu-bit%s%s integer", (unsigned long)(8 * H5Tget_size(type)), order_s, + sign_s); print_precision(buffer, type, ind); return TRUE; } - /*------------------------------------------------------------------------- * Function: print_float_type * @@ -720,15 +733,15 @@ static hbool_t print_float_type(h5tools_str_t *buffer, hid_t type, int ind) { H5T_order_t order; /* byte order value */ - const char *order_s=NULL; /* byte order string */ + const char *order_s = NULL; /* byte order string */ size_t spos; /* sign bit position */ size_t esize, epos; /* exponent size and position */ size_t msize, mpos; /* significand size and position */ size_t ebias; /* exponent bias */ H5T_norm_t norm; /* significand normalization */ - const char *norm_s=NULL; /* normalization string */ + const char *norm_s = NULL; /* normalization string */ H5T_pad_t pad; /* internal padding value */ - const char *pad_s=NULL; /* internal padding string */ + const char *pad_s = NULL; /* internal padding string */ if (H5T_FLOAT != H5Tget_class(type)) return FALSE; @@ -755,13 +768,13 @@ print_float_type(h5tools_str_t *buffer, hid_t type, int ind) /* Print size and byte order on first line, precision and padding on * subsequent lines. */ - h5tools_str_append(buffer, "%lu-bit%s floating-point", (unsigned long)(8*H5Tget_size(type)), order_s); + h5tools_str_append(buffer, "%lu-bit%s floating-point", (unsigned long)(8 * H5Tget_size(type)), order_s); print_precision(buffer, type, ind); /* Print sizes, locations, and other information about each field */ - H5Tget_fields (type, &spos, &epos, &esize, &mpos, &msize); + H5Tget_fields(type, &spos, &epos, &esize, &mpos, &msize); ebias = H5Tget_ebias(type); - norm = H5Tget_norm(type); + norm = H5Tget_norm(type); switch (norm) { case H5T_NORM_IMPLIED: norm_s = ", msb implied"; @@ -775,14 +788,14 @@ print_float_type(h5tools_str_t *buffer, hid_t type, int ind) case H5T_NORM_ERROR: norm_s = ", unknown normalization"; break; - default: - ; - break; + default:; + break; } - h5tools_str_append(buffer, "\n%*s(significant for %lu bit%s at bit %lu%s)", ind, "", - (unsigned long)msize, 1==msize?"":"s", (unsigned long)mpos, norm_s); - h5tools_str_append(buffer, "\n%*s(exponent for %lu bit%s at bit %lu, bias is 0x%lx)", - ind, "", (unsigned long)esize, 1==esize?"":"s", (unsigned long)epos, (unsigned long)ebias); + h5tools_str_append(buffer, "\n%*s(significant for %lu bit%s at bit %lu%s)", ind, "", (unsigned long)msize, + 1 == msize ? "" : "s", (unsigned long)mpos, norm_s); + h5tools_str_append(buffer, "\n%*s(exponent for %lu bit%s at bit %lu, bias is 0x%lx)", ind, "", + (unsigned long)esize, 1 == esize ? "" : "s", (unsigned long)epos, + (unsigned long)ebias); h5tools_str_append(buffer, "\n%*s(sign bit at %lu)", ind, "", (unsigned long)spos); /* Display internal padding */ @@ -802,16 +815,14 @@ print_float_type(h5tools_str_t *buffer, hid_t type, int ind) case H5T_NPAD: pad_s = "unknown"; break; - default: - ; - break; + default:; + break; } h5tools_str_append(buffer, "\n%*s(internal padding bits are %s)", ind, "", pad_s); } return TRUE; } - /*------------------------------------------------------------------------- * Function: print_cmpd_type * @@ -824,39 +835,39 @@ print_float_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_cmpd_type(h5tools_str_t *buffer, hid_t type, int ind) { - char *name = NULL; /* member name */ - size_t size; /* total size of type in bytes */ - hid_t subtype; /* member data type */ - int nmembs; /* number of members */ - int n; /* miscellaneous counters */ - unsigned i; /* miscellaneous counters */ - - if(H5T_COMPOUND != H5Tget_class(type)) + char * name = NULL; /* member name */ + size_t size; /* total size of type in bytes */ + hid_t subtype; /* member data type */ + int nmembs; /* number of members */ + int n; /* miscellaneous counters */ + unsigned i; /* miscellaneous counters */ + + if (H5T_COMPOUND != H5Tget_class(type)) return FALSE; - if((nmembs = H5Tget_nmembers(type)) < 0) + if ((nmembs = H5Tget_nmembers(type)) < 0) return FALSE; h5tools_str_append(buffer, "struct {"); for (i = 0; i < (unsigned)nmembs; i++) { /* Name and offset */ name = H5Tget_member_name(type, i); - h5tools_str_append(buffer, "\n%*s\"", ind+4, ""); + h5tools_str_append(buffer, "\n%*s\"", ind + 4, ""); n = print_string(buffer, name, FALSE); - h5tools_str_append(buffer, "\"%*s +%-4lu ", MAX(0, 16-n), "", (unsigned long)H5Tget_member_offset(type, i)); + h5tools_str_append(buffer, "\"%*s +%-4lu ", MAX(0, 16 - n), "", + (unsigned long)H5Tget_member_offset(type, i)); H5free_memory(name); /* Member's type */ subtype = H5Tget_member_type(type, i); - print_type(buffer, subtype, ind+4); + print_type(buffer, subtype, ind + 4); H5Tclose(subtype); } size = H5Tget_size(type); - h5tools_str_append(buffer, "\n%*s} %lu byte%s", ind, "", (unsigned long)size, 1==size?"":"s"); + h5tools_str_append(buffer, "\n%*s} %lu byte%s", ind, "", (unsigned long)size, 1 == size ? "" : "s"); return TRUE; } - /*------------------------------------------------------------------------- * Function: print_enum_type * @@ -869,8 +880,8 @@ print_cmpd_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) { - int nmembs; /* number of members */ - hid_t super; /* enum base integer type */ + int nmembs; /* number of members */ + hid_t super; /* enum base integer type */ if (H5T_ENUM != H5Tget_class(type)) return FALSE; @@ -883,11 +894,11 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) h5tools_str_append(buffer, " {"); if (nmembs > 0) { - char **name; /* member names */ - unsigned char *value; /* value array */ - hid_t native = H5I_INVALID_HID; /* native integer data type */ - size_t dst_size; /* destination value type size */ - unsigned i; /* miscellaneous counters */ + char ** name; /* member names */ + unsigned char *value; /* value array */ + hid_t native = H5I_INVALID_HID; /* native integer data type */ + size_t dst_size; /* destination value type size */ + unsigned i; /* miscellaneous counters */ /* Determine what data type to use for the native values. To simplify * things we entertain three possibilities: @@ -905,7 +916,7 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) dst_size = H5Tget_size(type); /* Get the names and raw values of all members */ - name = (char **)HDcalloc((size_t)nmembs, sizeof(char *)); + name = (char **)HDcalloc((size_t)nmembs, sizeof(char *)); value = (unsigned char *)HDcalloc((size_t)nmembs, MAX(H5Tget_size(type), dst_size)); for (i = 0; i < (unsigned)nmembs; i++) { name[i] = H5Tget_member_name(type, i); @@ -930,10 +941,10 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) /* Print members */ for (i = 0; i < (unsigned)nmembs; i++) { - unsigned char *copy; /* a pointer to value array */ - int nchars; /* number of output characters */ + unsigned char *copy; /* a pointer to value array */ + int nchars; /* number of output characters */ - h5tools_str_append(buffer, "\n%*s", ind+4, ""); + h5tools_str_append(buffer, "\n%*s", ind + 4, ""); nchars = print_string(buffer, name[i], TRUE); h5tools_str_append(buffer, "%*s = ", MAX(0, 16 - nchars), ""); @@ -942,30 +953,30 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) h5tools_str_append(buffer, "0x"); for (j = 0; j < dst_size; j++) - h5tools_str_append(buffer, "%02x", value[i*dst_size+j]); + h5tools_str_append(buffer, "%02x", value[i * dst_size + j]); } else if (H5T_SGN_NONE == H5Tget_sign(native)) { /*On SGI Altix(cobalt), wrong values were printed out with "value+i*dst_size" *strangely, unless use another pointer "copy".*/ copy = value + i * dst_size; - h5tools_str_append(buffer, HSIZE_T_FORMAT, *((unsigned long long*)((void*)copy))); + h5tools_str_append(buffer, HSIZE_T_FORMAT, *((unsigned long long *)((void *)copy))); } else { /*On SGI Altix(cobalt), wrong values were printed out with "value+i*dst_size" *strangely, unless use another pointer "copy".*/ copy = value + i * dst_size; - h5tools_str_append(buffer, "%lld", *((long long*)((void*)copy))); + h5tools_str_append(buffer, "%lld", *((long long *)((void *)copy))); } } /* Release resources */ - for(i = 0; i < (unsigned)nmembs; i++) + for (i = 0; i < (unsigned)nmembs; i++) H5free_memory(name[i]); HDfree(name); HDfree(value); } else - h5tools_str_append(buffer, "\n%*s <empty>", ind+4, ""); + h5tools_str_append(buffer, "\n%*s <empty>", ind + 4, ""); h5tools_str_append(buffer, "\n%*s}", ind, ""); @@ -974,7 +985,6 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_string_type * @@ -987,10 +997,10 @@ print_enum_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_string_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) { - H5T_str_t pad; - const char *pad_s=NULL; + H5T_str_t pad; + const char *pad_s = NULL; H5T_cset_t cset; - const char *cset_s=NULL; + const char *cset_s = NULL; if (H5T_STRING != H5Tget_class(type)) return FALSE; @@ -1023,9 +1033,8 @@ print_string_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) case H5T_STR_ERROR: pad_s = "unknown-format"; break; - default: - ; - break; + default:; + break; } /* Character set */ @@ -1054,9 +1063,8 @@ print_string_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) case H5T_CSET_ERROR: cset_s = "unknown-character-set"; break; - default: - ; - break; + default:; + break; } if (H5Tis_variable_str(type)) { @@ -1069,7 +1077,6 @@ print_string_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_reference_type * @@ -1101,7 +1108,6 @@ print_reference_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_opaque_type * @@ -1114,7 +1120,7 @@ print_reference_type(h5tools_str_t *buffer, hid_t type, int H5_ATTR_UNUSED ind) static hbool_t print_opaque_type(h5tools_str_t *buffer, hid_t type, int ind) { - char *tag; + char * tag; size_t size; if (H5T_OPAQUE != H5Tget_class(type)) @@ -1131,7 +1137,6 @@ print_opaque_type(h5tools_str_t *buffer, hid_t type, int ind) return TRUE; } - /*------------------------------------------------------------------------- * Function: print_vlen_type * @@ -1144,7 +1149,7 @@ print_opaque_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_vlen_type(h5tools_str_t *buffer, hid_t type, int ind) { - hid_t super; + hid_t super; if (H5T_VLEN != H5Tget_class(type)) return FALSE; @@ -1156,7 +1161,6 @@ print_vlen_type(h5tools_str_t *buffer, hid_t type, int ind) return TRUE; } - /*--------------------------------------------------------------------------- * Purpose: Print information about an array type * @@ -1167,9 +1171,9 @@ print_vlen_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_array_type(h5tools_str_t *buffer, hid_t type, int ind) { - hid_t super; - int ndims, i; - hsize_t *dims=NULL; + hid_t super; + int ndims, i; + hsize_t *dims = NULL; if (H5T_ARRAY != H5Tget_class(type)) return FALSE; @@ -1180,7 +1184,7 @@ print_array_type(h5tools_str_t *buffer, hid_t type, int ind) /* Print dimensions */ for (i = 0; i < ndims; i++) - h5tools_str_append(buffer, "%s" HSIZE_T_FORMAT , i?",":"[", dims[i]); + h5tools_str_append(buffer, "%s" HSIZE_T_FORMAT, i ? "," : "[", dims[i]); h5tools_str_append(buffer, "]"); HDfree(dims); @@ -1188,16 +1192,14 @@ print_array_type(h5tools_str_t *buffer, hid_t type, int ind) else h5tools_str_append(buffer, " [SCALAR]\n", rawoutstream); - /* Print parent type */ h5tools_str_append(buffer, " "); super = H5Tget_super(type); - print_type(buffer, super, ind+4); + print_type(buffer, super, ind + 4); H5Tclose(super); return TRUE; } - /*------------------------------------------------------------------------- * Function: print_bitfield_type * @@ -1210,12 +1212,12 @@ print_array_type(h5tools_str_t *buffer, hid_t type, int ind) static hbool_t print_bitfield_type(h5tools_str_t *buffer, hid_t type, int ind) { - H5T_order_t order; /* byte order value */ - const char *order_s = NULL; /* byte order string */ + H5T_order_t order; /* byte order value */ + const char *order_s = NULL; /* byte order string */ if (H5T_BITFIELD != H5Tget_class(type)) return FALSE; - if (H5Tget_size(type)>1) { + if (H5Tget_size(type) > 1) { order = H5Tget_order(type); if (H5T_ORDER_LE == order) { order_s = " little-endian"; @@ -1234,12 +1236,11 @@ print_bitfield_type(h5tools_str_t *buffer, hid_t type, int ind) order_s = ""; } - h5tools_str_append(buffer, "%lu-bit%s bitfield", (unsigned long)(8*H5Tget_size(type)), order_s); + h5tools_str_append(buffer, "%lu-bit%s bitfield", (unsigned long)(8 * H5Tget_size(type)), order_s); print_precision(buffer, type, ind); return TRUE; } - /*------------------------------------------------------------------------- * Function: print_type * @@ -1256,11 +1257,11 @@ print_bitfield_type(h5tools_str_t *buffer, hid_t type, int ind) static void print_type(h5tools_str_t *buffer, hid_t type, int ind) { - H5T_class_t data_class = H5Tget_class(type); + H5T_class_t data_class = H5Tget_class(type); /* Bad data type */ if (type < 0) { - h5tools_str_append(buffer,"<ERROR>"); + h5tools_str_append(buffer, "<ERROR>"); return; } @@ -1273,29 +1274,25 @@ print_type(h5tools_str_t *buffer, hid_t type, int ind) H5Otoken_to_str(type, &oi.token, &type_string); - h5tools_str_append(buffer,"shared-%lu:%s", oi.fileno, type_string); + h5tools_str_append(buffer, "shared-%lu:%s", oi.fileno, type_string); H5free_memory(type_string); } /* end if */ else - h5tools_str_append(buffer,"shared "); + h5tools_str_append(buffer, "shared "); } /* end if */ /* Print the type */ - if (print_native_type(buffer, type, ind) || - print_ieee_type(buffer, type, ind) || - print_cmpd_type(buffer, type, ind) || - print_enum_type(buffer, type, ind) || - print_string_type(buffer, type, ind) || - print_reference_type(buffer, type, ind) || - print_vlen_type(buffer, type, ind) || - print_array_type(buffer, type, ind) || - print_opaque_type(buffer, type, ind) || - print_bitfield_type(buffer, type, ind)) + if (print_native_type(buffer, type, ind) || print_ieee_type(buffer, type, ind) || + print_cmpd_type(buffer, type, ind) || print_enum_type(buffer, type, ind) || + print_string_type(buffer, type, ind) || print_reference_type(buffer, type, ind) || + print_vlen_type(buffer, type, ind) || print_array_type(buffer, type, ind) || + print_opaque_type(buffer, type, ind) || print_bitfield_type(buffer, type, ind)) return; /* Unknown type */ - h5tools_str_append(buffer,"%lu-byte class-%u unknown", (unsigned long)H5Tget_size(type), (unsigned)data_class); + h5tools_str_append(buffer, "%lu-byte class-%u unknown", (unsigned long)H5Tget_size(type), + (unsigned)data_class); } /*------------------------------------------------------------------------- @@ -1309,37 +1306,37 @@ print_type(h5tools_str_t *buffer, hid_t type, int ind) static void dump_dataset_values(hid_t dset) { - hid_t f_type = H5I_INVALID_HID; - hid_t space = H5I_INVALID_HID; - hsize_t total_size[H5S_MAX_RANK]; - int ndims; - char string_prefix[64]; - static char fmt_double[16]; - static char fmt_float[16]; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t outputformat; - h5tool_format_t *info = &ls_dataformat; - H5R_ref_t *ref_buf = NULL; + hid_t f_type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; + hsize_t total_size[H5S_MAX_RANK]; + int ndims; + char string_prefix[64]; + static char fmt_double[16]; + static char fmt_float[16]; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t outputformat; + h5tool_format_t * info = &ls_dataformat; + H5R_ref_t * ref_buf = NULL; H5TOOLS_START_DEBUG(""); f_type = H5Dget_type(dset); - space = H5Dget_space(dset); + space = H5Dget_space(dset); HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); - outputformat = *info; - outputformat.line_1st = NULL; - outputformat.idx_fmt = ""; + outputformat = *info; + outputformat.line_1st = NULL; + outputformat.idx_fmt = ""; if (simple_output_g) { - outputformat.idx_fmt = ""; - outputformat.line_per_line = 1; + outputformat.idx_fmt = ""; + outputformat.line_per_line = 1; outputformat.line_multi_new = 0; - outputformat.line_pre = " "; - outputformat.line_cont = " "; + outputformat.line_pre = " "; + outputformat.line_cont = " "; outputformat.arr_pre = ""; outputformat.arr_suf = ""; @@ -1354,9 +1351,8 @@ dump_dataset_values(hid_t dset) if (label_g) outputformat.cmpd_name = "%s="; - outputformat.elmt_suf1 = " "; + outputformat.elmt_suf1 = " "; outputformat.str_locale = ESCAPE_HTML; - } else { if (no_line_wrap_g) { @@ -1367,8 +1363,8 @@ dump_dataset_values(hid_t dset) } if (label_g) outputformat.cmpd_name = "%s="; - outputformat.line_pre = " %s "; - outputformat.line_cont = " %s "; + outputformat.line_pre = " %s "; + outputformat.line_cont = " %s "; outputformat.str_repeat = 8; outputformat.arr_pre = NULL; @@ -1399,7 +1395,7 @@ dump_dataset_values(hid_t dset) else if (string_g && H5Tget_size(f_type) == 1 && (H5Tget_class(f_type) == H5T_INTEGER)) { /* Print 1-byte integer data as an ASCI character string instead of * integers if the `-s' or `--string' command-line option was given. */ - outputformat.ascii = TRUE; + outputformat.ascii = TRUE; outputformat.elmt_suf1 = ""; outputformat.elmt_suf2 = ""; HDsnprintf(string_prefix, sizeof(string_prefix), "%s\"", outputformat.line_pre); @@ -1409,18 +1405,20 @@ dump_dataset_values(hid_t dset) info = &outputformat; ctx.indent_level = 1; - ctx.cur_column = (size_t)curr_pos; + ctx.cur_column = (size_t)curr_pos; /* Print all the values. */ h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Data:\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, + (hsize_t)0); ctx.need_prefix = TRUE; - ctx.cur_column = (size_t)curr_pos; + ctx.cur_column = (size_t)curr_pos; if (H5Tget_class(f_type) == H5T_REFERENCE) { H5TOOLS_DEBUG("reference class type"); - if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && !H5Tequal(f_type, H5T_STD_REF_OBJ)) { + if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && + !H5Tequal(f_type, H5T_STD_REF_OBJ)) { H5TOOLS_GOTO_DONE_NO_RET(); } @@ -1433,9 +1431,10 @@ dump_dataset_values(hid_t dset) ctx.need_prefix = TRUE; - if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) { + if (NULL != + (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) { H5TOOLS_DEBUG("H5Dread reference read"); - if(H5Dread(dset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf) < 0) { + if (H5Dread(dset, H5T_STD_REF, H5S_ALL, H5S_ALL, H5P_DEFAULT, ref_buf) < 0) { HDfree(ref_buf); H5TOOLS_INFO("H5Dread reference failed"); H5TOOLS_GOTO_DONE_NO_RET(); @@ -1450,7 +1449,8 @@ dump_dataset_values(hid_t dset) if (h5tools_dump_dset(rawoutstream, info, &ctx, dset) < 0) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Unable to print data."); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); } } done: @@ -1464,7 +1464,6 @@ done: H5TOOLS_ENDDEBUG(""); } - /*------------------------------------------------------------------------- * Function: dump_attribute_values * @@ -1476,37 +1475,37 @@ done: static void dump_attribute_values(hid_t attr) { - hid_t f_type = H5I_INVALID_HID; - hid_t space = H5I_INVALID_HID; - hsize_t total_size[H5S_MAX_RANK]; - int ndims; - char string_prefix[64]; - static char fmt_double[16]; - static char fmt_float[16]; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t outputformat; - h5tool_format_t *info = &ls_dataformat; - H5R_ref_t *ref_buf = NULL; + hid_t f_type = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; + hsize_t total_size[H5S_MAX_RANK]; + int ndims; + char string_prefix[64]; + static char fmt_double[16]; + static char fmt_float[16]; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t outputformat; + h5tool_format_t * info = &ls_dataformat; + H5R_ref_t * ref_buf = NULL; H5TOOLS_START_DEBUG(""); f_type = H5Aget_type(attr); - space = H5Aget_space(attr); + space = H5Aget_space(attr); HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); - outputformat = *info; - outputformat.line_1st = NULL; - outputformat.idx_fmt = ""; + outputformat = *info; + outputformat.line_1st = NULL; + outputformat.idx_fmt = ""; if (simple_output_g) { - outputformat.idx_fmt = ""; - outputformat.line_per_line = 1; + outputformat.idx_fmt = ""; + outputformat.line_per_line = 1; outputformat.line_multi_new = 0; - outputformat.line_pre = " "; - outputformat.line_cont = " "; + outputformat.line_pre = " "; + outputformat.line_cont = " "; outputformat.arr_pre = ""; outputformat.arr_suf = ""; @@ -1521,9 +1520,8 @@ dump_attribute_values(hid_t attr) if (label_g) outputformat.cmpd_name = "%s="; - outputformat.elmt_suf1 = " "; + outputformat.elmt_suf1 = " "; outputformat.str_locale = ESCAPE_HTML; - } else { if (no_line_wrap_g) { @@ -1534,8 +1532,8 @@ dump_attribute_values(hid_t attr) } if (label_g) outputformat.cmpd_name = "%s="; - outputformat.line_pre = " %s "; - outputformat.line_cont = " %s "; + outputformat.line_pre = " %s "; + outputformat.line_cont = " %s "; outputformat.str_repeat = 8; outputformat.arr_pre = NULL; @@ -1566,7 +1564,7 @@ dump_attribute_values(hid_t attr) else if (string_g && H5Tget_size(f_type) == 1 && (H5Tget_class(f_type) == H5T_INTEGER)) { /* Print 1-byte integer data as an ASCI character string instead of * integers if the `-s' or `--string' command-line option was given. */ - outputformat.ascii = TRUE; + outputformat.ascii = TRUE; outputformat.elmt_suf1 = ""; outputformat.elmt_suf2 = ""; HDsnprintf(string_prefix, sizeof(string_prefix), "%s\"", outputformat.line_pre); @@ -1576,19 +1574,21 @@ dump_attribute_values(hid_t attr) info = &outputformat; ctx.indent_level = 2; - ctx.cur_column = (size_t)curr_pos; + ctx.cur_column = (size_t)curr_pos; /* Print all the values. */ h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Data:\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, + (hsize_t)0); ctx.need_prefix = TRUE; - ctx.cur_column = (size_t)curr_pos; + ctx.cur_column = (size_t)curr_pos; if (H5Tget_class(f_type) == H5T_REFERENCE) { H5TOOLS_DEBUG("reference class type"); - if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && !H5Tequal(f_type, H5T_STD_REF_OBJ)) { + if (!H5Tequal(f_type, H5T_STD_REF) && !H5Tequal(f_type, H5T_STD_REF_DSETREG) && + !H5Tequal(f_type, H5T_STD_REF_OBJ)) { H5TOOLS_GOTO_DONE_NO_RET(); } @@ -1601,9 +1601,10 @@ dump_attribute_values(hid_t attr) ctx.need_prefix = TRUE; - if (NULL != (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) { + if (NULL != + (ref_buf = (H5R_ref_t *)HDcalloc(MAX(sizeof(unsigned), sizeof(H5R_ref_t)), (size_t)ndims))) { H5TOOLS_DEBUG("H5Aread reference read"); - if(H5Aread(attr, H5T_STD_REF, ref_buf) < 0) { + if (H5Aread(attr, H5T_STD_REF, ref_buf) < 0) { HDfree(ref_buf); H5TOOLS_INFO("H5Aread reference failed"); H5TOOLS_GOTO_DONE_NO_RET(); @@ -1622,7 +1623,8 @@ dump_attribute_values(hid_t attr) if (h5tools_dump_mem(rawoutstream, info, &ctx, attr) < 0) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Unable to print data."); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); } ctx.indent_level--; H5TOOLS_DEBUG("Attribute data read complete"); @@ -1649,20 +1651,20 @@ done: */ static herr_t list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ainfo, - void H5_ATTR_UNUSED *op_data) + void H5_ATTR_UNUSED *op_data) { - hid_t attr = H5I_INVALID_HID; - hid_t space = H5I_INVALID_HID; - hid_t type = H5I_INVALID_HID; - hsize_t size[H5S_MAX_RANK]; - hsize_t nelmts = 1; - int ndims; - int i; - H5S_class_t space_type; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + hid_t attr = H5I_INVALID_HID; + hid_t space = H5I_INVALID_HID; + hid_t type = H5I_INVALID_HID; + hsize_t size[H5S_MAX_RANK]; + hsize_t nelmts = 1; + int ndims; + int i; + H5S_class_t space_type; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; H5TOOLS_START_DEBUG(""); @@ -1670,7 +1672,7 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain HDmemset(&buffer, 0, sizeof(h5tools_str_t)); ctx.indent_level = 2; - ctx.cur_column = (size_t)curr_pos; + ctx.cur_column = (size_t)curr_pos; h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " Attribute: "); @@ -1680,41 +1682,45 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain H5TOOLS_DEBUG("Attribute name:%s", attr_name); if ((attr = H5Aopen(obj, attr_name, H5P_DEFAULT)) >= 0) { space = H5Aget_space(attr); - type = H5Aget_type(attr); + type = H5Aget_type(attr); /* Data space */ - ndims = H5Sget_simple_extent_dims(space, size, NULL); + ndims = H5Sget_simple_extent_dims(space, size, NULL); space_type = H5Sget_simple_extent_type(space); H5TOOLS_DEBUG("Attribute ndims:%d", ndims); - switch(space_type) { + switch (space_type) { case H5S_SCALAR: /* scalar dataspace */ h5tools_str_append(&buffer, " scalar\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); break; case H5S_SIMPLE: /* simple dataspace */ h5tools_str_append(&buffer, " {"); for (i = 0; i < ndims; i++) { - h5tools_str_append(&buffer, "%s" HSIZE_T_FORMAT, i?", ":"", size[i]); + h5tools_str_append(&buffer, "%s" HSIZE_T_FORMAT, i ? ", " : "", size[i]); nelmts *= size[i]; } h5tools_str_append(&buffer, "}\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); break; case H5S_NULL: /* null dataspace */ h5tools_str_append(&buffer, " null\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); break; case H5S_NO_CLASS: default: /* Unknown dataspace type */ h5tools_str_append(&buffer, " unknown\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); break; } /* end switch */ @@ -1723,7 +1729,8 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain h5tools_str_append(&buffer, " %-10s ", "Type:"); print_type(&buffer, type, 15); h5tools_str_append(&buffer, "\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); H5Sclose(space); H5Tclose(type); @@ -1743,7 +1750,6 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain return 0; } - /*------------------------------------------------------------------------- * Function: dataset_list1 * @@ -1759,16 +1765,16 @@ list_attr(hid_t obj, const char *attr_name, const H5A_info_t H5_ATTR_UNUSED *ain static herr_t dataset_list1(hid_t dset) { - hsize_t cur_size[H5S_MAX_RANK]; /* current dataset dimensions */ - hsize_t max_size[H5S_MAX_RANK]; /* maximum dataset dimensions */ - hid_t space; /* data space */ - int ndims; /* dimensionality */ - H5S_class_t space_type; /* type of dataspace */ - int i; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + hsize_t cur_size[H5S_MAX_RANK]; /* current dataset dimensions */ + hsize_t max_size[H5S_MAX_RANK]; /* maximum dataset dimensions */ + hid_t space; /* data space */ + int ndims; /* dimensionality */ + H5S_class_t space_type; /* type of dataspace */ + int i; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1777,17 +1783,17 @@ dataset_list1(hid_t dset) /* Information that goes on the same row as the name. The name has * already been printed. */ - space = H5Dget_space(dset); + space = H5Dget_space(dset); space_type = H5Sget_simple_extent_type(space); - ndims = H5Sget_simple_extent_dims(space, cur_size, max_size); + ndims = H5Sget_simple_extent_dims(space, cur_size, max_size); h5tools_str_append(&buffer, " {"); for (i = 0; i < ndims; i++) { - h5tools_str_append(&buffer, "%s"HSIZE_T_FORMAT, i?", ":"", cur_size[i]); - if (max_size[i]==H5S_UNLIMITED) { + h5tools_str_append(&buffer, "%s" HSIZE_T_FORMAT, i ? ", " : "", cur_size[i]); + if (max_size[i] == H5S_UNLIMITED) { h5tools_str_append(&buffer, "/%s", "Inf"); } else if (max_size[i] != cur_size[i] || verbose_g > 0) { - h5tools_str_append(&buffer, "/"HSIZE_T_FORMAT, max_size[i]); + h5tools_str_append(&buffer, "/" HSIZE_T_FORMAT, max_size[i]); } } if (space_type == H5S_SCALAR) @@ -1795,15 +1801,15 @@ dataset_list1(hid_t dset) else if (space_type == H5S_NULL) h5tools_str_append(&buffer, "NULL"); h5tools_str_append(&buffer, "}"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); - H5Sclose (space); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, + (hsize_t)0); + H5Sclose(space); h5tools_str_close(&buffer); return 0; } - /*------------------------------------------------------------------------- * Function: dataset_list2 * @@ -1817,30 +1823,30 @@ dataset_list1(hid_t dset) static herr_t dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) { - hid_t dcpl; /* dataset creation property list */ - hid_t type; /* data type of dataset */ - hid_t space; /* data space of dataset */ - int nf; /* number of filters */ - unsigned filt_flags; /* filter flags */ - H5Z_filter_t filt_id; /* filter identification number */ - unsigned cd_values[20]; /* filter client data values */ - size_t cd_nelmts; /* filter client number of values */ - size_t cd_num; /* filter client data counter */ - char f_name[256]; /* filter/file name */ - char s[64]; /* temporary string buffer */ - off_t f_offset; /* offset in external file */ - hsize_t f_size; /* bytes used in external file */ - hsize_t total, used; /* total size or offset */ - int ndims; /* dimensionality */ - int n, max_len; /* max extern file name length */ - double utilization; /* percent utilization of storage */ - H5T_class_t tclass; /* datatype class identifier */ - int i; - H5D_layout_t stl; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + hid_t dcpl; /* dataset creation property list */ + hid_t type; /* data type of dataset */ + hid_t space; /* data space of dataset */ + int nf; /* number of filters */ + unsigned filt_flags; /* filter flags */ + H5Z_filter_t filt_id; /* filter identification number */ + unsigned cd_values[20]; /* filter client data values */ + size_t cd_nelmts; /* filter client number of values */ + size_t cd_num; /* filter client data counter */ + char f_name[256]; /* filter/file name */ + char s[64]; /* temporary string buffer */ + off_t f_offset; /* offset in external file */ + hsize_t f_size; /* bytes used in external file */ + hsize_t total, used; /* total size or offset */ + int ndims; /* dimensionality */ + int n, max_len; /* max extern file name length */ + double utilization; /* percent utilization of storage */ + H5T_class_t tclass; /* datatype class identifier */ + int i; + H5D_layout_t stl; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -1848,26 +1854,24 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) h5tools_str_reset(&buffer); if (verbose_g > 0) { - dcpl = H5Dget_create_plist(dset); + dcpl = H5Dget_create_plist(dset); space = H5Dget_space(dset); - type = H5Dget_type(dset); + type = H5Dget_type(dset); stl = H5Pget_layout(dcpl); switch (stl) { - case H5D_CHUNKED: - { - hsize_t chsize[64]; /* chunk size in elements */ - - ndims = H5Pget_chunk(dcpl, (int)NELMTS(chsize), chsize/*out*/); - h5tools_str_append(&buffer, " %-10s {", "Chunks:"); - total = H5Tget_size(type); - for (i = 0; i < ndims; i++) { - h5tools_str_append(&buffer, "%s"HSIZE_T_FORMAT, i?", ":"", chsize[i]); - total *= chsize[i]; - } - h5tools_str_append(&buffer, "} "HSIZE_T_FORMAT" bytes\n", total); + case H5D_CHUNKED: { + hsize_t chsize[64]; /* chunk size in elements */ + + ndims = H5Pget_chunk(dcpl, (int)NELMTS(chsize), chsize /*out*/); + h5tools_str_append(&buffer, " %-10s {", "Chunks:"); + total = H5Tget_size(type); + for (i = 0; i < ndims; i++) { + h5tools_str_append(&buffer, "%s" HSIZE_T_FORMAT, i ? ", " : "", chsize[i]); + total *= chsize[i]; } - break; + h5tools_str_append(&buffer, "} " HSIZE_T_FORMAT " bytes\n", total); + } break; case H5D_COMPACT: break; case H5D_CONTIGUOUS: @@ -1876,64 +1880,72 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) for (i = 0, max_len = 0; i < nf; i++) { if (H5Pget_external(dcpl, (unsigned)i, sizeof(f_name), f_name, NULL, NULL) < 0) continue; - n = print_string(NULL, f_name, TRUE); + n = print_string(NULL, f_name, TRUE); max_len = MAX(max_len, n); } /* end for */ - h5tools_str_append(&buffer, " %-10s %d external file%s\n", "Extern:", nf, 1==nf?"":"s"); - h5tools_str_append(&buffer, " %4s %10s %10s %10s %s\n", "ID", "DSet-Addr", "File-Addr", "Bytes", "File"); - h5tools_str_append(&buffer, " %4s %10s %10s %10s ", "----", "----------", "----------", "----------"); + h5tools_str_append(&buffer, " %-10s %d external file%s\n", "Extern:", nf, + 1 == nf ? "" : "s"); + h5tools_str_append(&buffer, " %4s %10s %10s %10s %s\n", "ID", "DSet-Addr", + "File-Addr", "Bytes", "File"); + h5tools_str_append(&buffer, " %4s %10s %10s %10s ", "----", "----------", + "----------", "----------"); for (i = 0; i < max_len; i++) h5tools_str_append(&buffer, "-"); h5tools_str_append(&buffer, "\n"); - for (i = 0, total=0; i < nf; i++) { - if (H5Pget_external(dcpl, (unsigned)i, sizeof(f_name), f_name, &f_offset, &f_size)<0) { - h5tools_str_append(&buffer, " #%03d %10"H5_PRINTF_LL_WIDTH"u %10s %10s ***ERROR*** %s\n", - i, total, "", "", i+1<nf?"Following addresses are incorrect":""); + for (i = 0, total = 0; i < nf; i++) { + if (H5Pget_external(dcpl, (unsigned)i, sizeof(f_name), f_name, &f_offset, &f_size) < + 0) { + h5tools_str_append( + &buffer, + " #%03d %10" H5_PRINTF_LL_WIDTH "u %10s %10s ***ERROR*** %s\n", i, + total, "", "", i + 1 < nf ? "Following addresses are incorrect" : ""); } else if (H5S_UNLIMITED == f_size) { - h5tools_str_append(&buffer, " #%03d %10"H5_PRINTF_LL_WIDTH"u %10"H5_PRINTF_LL_WIDTH"u %10s ", - i, total, (hsize_t)f_offset, "INF"); + h5tools_str_append(&buffer, + " #%03d %10" H5_PRINTF_LL_WIDTH + "u %10" H5_PRINTF_LL_WIDTH "u %10s ", + i, total, (hsize_t)f_offset, "INF"); print_string(&buffer, f_name, TRUE); } else { - h5tools_str_append(&buffer, " #%03d %10" PRIuHSIZE " %10" PRIuHSIZE " %10" PRIuHSIZE " ", - i, total, (hsize_t)f_offset, f_size); + h5tools_str_append( + &buffer, " #%03d %10" PRIuHSIZE " %10" PRIuHSIZE " %10" PRIuHSIZE " ", + i, total, (hsize_t)f_offset, f_size); print_string(&buffer, f_name, TRUE); } h5tools_str_append(&buffer, "\n"); total += f_size; } - h5tools_str_append(&buffer, " %4s %10s %10s %10s ", "----", "----------", "----------", "----------"); + h5tools_str_append(&buffer, " %4s %10s %10s %10s ", "----", "----------", + "----------", "----------"); for (i = 0; i < max_len; i++) h5tools_str_append(&buffer, "-"); h5tools_str_append(&buffer, "\n"); } /* end if */ break; - case H5D_VIRTUAL: - { - char dset_name[256]; /* Dataset name */ - size_t vmaps; + case H5D_VIRTUAL: { + char dset_name[256]; /* Dataset name */ + size_t vmaps; - H5Pget_virtual_count(dcpl, &vmaps); + H5Pget_virtual_count(dcpl, &vmaps); - if (vmaps) { - size_t next; + if (vmaps) { + size_t next; - h5tools_str_append(&buffer, " %-10s {%ld} Source {\n", "Maps:", vmaps); - for (next = 0; next < (unsigned) vmaps; next++) { - H5Pget_virtual_filename(dcpl, next, f_name, sizeof(f_name)); - H5Pget_virtual_dsetname(dcpl, next, dset_name, sizeof(dset_name)); - h5tools_str_append(&buffer, " %-10s ", " "); - print_string(&buffer, f_name, TRUE); - h5tools_str_append(&buffer, " "); - print_string(&buffer, dset_name, TRUE); - h5tools_str_append(&buffer, "\n"); - } - h5tools_str_append(&buffer, " %-10s}\n", " "); + h5tools_str_append(&buffer, " %-10s {%ld} Source {\n", "Maps:", vmaps); + for (next = 0; next < (unsigned)vmaps; next++) { + H5Pget_virtual_filename(dcpl, next, f_name, sizeof(f_name)); + H5Pget_virtual_dsetname(dcpl, next, dset_name, sizeof(dset_name)); + h5tools_str_append(&buffer, " %-10s ", " "); + print_string(&buffer, f_name, TRUE); + h5tools_str_append(&buffer, " "); + print_string(&buffer, dset_name, TRUE); + h5tools_str_append(&buffer, "\n"); } + h5tools_str_append(&buffer, " %-10s}\n", " "); } - break; + } break; case H5D_LAYOUT_ERROR: case H5D_NLAYOUTS: @@ -1942,41 +1954,43 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) break; } /* Print total raw storage size */ - total = (hsize_t)H5Sget_simple_extent_npoints(space) * H5Tget_size(type); - used = H5Dget_storage_size(dset); + total = (hsize_t)H5Sget_simple_extent_npoints(space) * H5Tget_size(type); + used = H5Dget_storage_size(dset); tclass = H5Tget_class(type); h5tools_str_append(&buffer, " %-10s ", "Storage:"); switch (tclass) { - case H5T_VLEN: - h5tools_str_append(&buffer, "information not available"); - break; - - case H5T_REFERENCE: - if (H5Tequal(dset, H5T_STD_REF)) { - h5tools_str_append(&buffer, "reference information not available"); - } - else if (H5Tequal(dset, H5T_STD_REF_DSETREG)) { + case H5T_VLEN: h5tools_str_append(&buffer, "information not available"); - } - break; + break; - case H5T_NO_CLASS: - case H5T_INTEGER: - case H5T_FLOAT: - case H5T_TIME: - case H5T_STRING: - case H5T_BITFIELD: - case H5T_OPAQUE: - case H5T_COMPOUND: - case H5T_ENUM: - case H5T_ARRAY: - case H5T_NCLASSES: - default: - h5tools_str_append(&buffer, HSIZE_T_FORMAT" logical byte%s, "HSIZE_T_FORMAT" allocated byte%s", total, 1==total?"":"s", used, 1==used?"":"s"); - if (used > 0) { - utilization = ((double)total * (double)100.0f) / (double)used; - h5tools_str_append(&buffer, ", %1.2f%% utilization", utilization); - } + case H5T_REFERENCE: + if (H5Tequal(dset, H5T_STD_REF)) { + h5tools_str_append(&buffer, "reference information not available"); + } + else if (H5Tequal(dset, H5T_STD_REF_DSETREG)) { + h5tools_str_append(&buffer, "information not available"); + } + break; + + case H5T_NO_CLASS: + case H5T_INTEGER: + case H5T_FLOAT: + case H5T_TIME: + case H5T_STRING: + case H5T_BITFIELD: + case H5T_OPAQUE: + case H5T_COMPOUND: + case H5T_ENUM: + case H5T_ARRAY: + case H5T_NCLASSES: + default: + h5tools_str_append(&buffer, + HSIZE_T_FORMAT " logical byte%s, " HSIZE_T_FORMAT " allocated byte%s", + total, 1 == total ? "" : "s", used, 1 == used ? "" : "s"); + if (used > 0) { + utilization = ((double)total * (double)100.0f) / (double)used; + h5tools_str_append(&buffer, ", %1.2f%% utilization", utilization); + } } h5tools_str_append(&buffer, "\n"); @@ -1985,23 +1999,27 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) if ((nf = H5Pget_nfilters(dcpl)) > 0) { for (i = 0; i < nf; i++) { cd_nelmts = NELMTS(cd_values); - filt_id = H5Pget_filter2(dcpl, (unsigned)i, &filt_flags, &cd_nelmts, cd_values, sizeof(f_name), f_name, NULL); + filt_id = H5Pget_filter2(dcpl, (unsigned)i, &filt_flags, &cd_nelmts, cd_values, + sizeof(f_name), f_name, NULL); f_name[sizeof(f_name) - 1] = '\0'; HDsnprintf(s, sizeof(s), "Filter-%d:", i); - h5tools_str_append(&buffer, " %-10s %s-%u %s {", s, (f_name[0] ? f_name : "method"), (unsigned)filt_id, ((filt_flags & H5Z_FLAG_OPTIONAL) ? "OPT" : "")); + h5tools_str_append(&buffer, " %-10s %s-%u %s {", s, (f_name[0] ? f_name : "method"), + (unsigned)filt_id, ((filt_flags & H5Z_FLAG_OPTIONAL) ? "OPT" : "")); for (cd_num = 0; cd_num < cd_nelmts; cd_num++) h5tools_str_append(&buffer, "%s%u", (cd_num ? ", " : ""), cd_values[cd_num]); h5tools_str_append(&buffer, "}\n"); } /* end for */ - } /* end if */ - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + } /* end if */ + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); /* Print data type */ h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " %-10s ", "Type:"); print_type(&buffer, type, 15); h5tools_str_append(&buffer, "\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); /* Print address information */ if (address_g) @@ -2021,7 +2039,6 @@ dataset_list2(hid_t dset, const char H5_ATTR_UNUSED *name) return 0; } /* end dataset_list2() */ - /*------------------------------------------------------------------------- * Function: datatype_list2 * @@ -2036,10 +2053,10 @@ static herr_t datatype_list2(hid_t type, const char H5_ATTR_UNUSED *name) { if (verbose_g > 0) { - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2049,14 +2066,14 @@ datatype_list2(hid_t type, const char H5_ATTR_UNUSED *name) h5tools_str_append(&buffer, " %-10s ", "Type:"); print_type(&buffer, type, 15); h5tools_str_append(&buffer, "\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); h5tools_str_close(&buffer); } return 0; } - /*------------------------------------------------------------------------- * Function: list_obj * @@ -2069,12 +2086,12 @@ datatype_list2(hid_t type, const char H5_ATTR_UNUSED *name) static herr_t list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, void *_iter) { - H5O_type_t obj_type = oinfo->type; /* Type of the object */ - iter_t *iter = (iter_t*)_iter; - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + H5O_type_t obj_type = oinfo->type; /* Type of the object */ + iter_t * iter = (iter_t *)_iter; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; H5TOOLS_START_DEBUG(""); @@ -2097,7 +2114,8 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi h5tools_str_append(&buffer, "{"); if (obj_type >= 0 && dispatch_g[obj_type].name) h5tools_str_append(&buffer, "%s", dispatch_g[obj_type].name); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, + (hsize_t)0); /* Check if we've seen this object before */ if (first_seen) { @@ -2107,10 +2125,11 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi if (!iter->symlink_target) { h5tools_str_append(&buffer, "\n"); } - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); } /* end if */ else { - hid_t obj_id = H5I_INVALID_HID; /* ID of object opened */ + hid_t obj_id = H5I_INVALID_HID; /* ID of object opened */ /* Open the object. Not all objects can be opened. If this is the case * then return right away. @@ -2119,7 +2138,8 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi if (obj_type >= 0 && (obj_id = H5Oopen(iter->fid, name, H5P_DEFAULT)) < 0) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " *ERROR*\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); goto done; } /* end if */ @@ -2130,17 +2150,18 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi if (!iter->symlink_target || (verbose_g > 0)) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, "\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); } /* Show detailed information about the object, beginning with information * which is common to all objects. */ if (verbose_g > 0) { - size_t buf_size = 0; - char* comment = NULL; - char* obj_tok_str = NULL; + size_t buf_size = 0; + char * comment = NULL; + char * obj_tok_str = NULL; ssize_t cmt_bufsize = -1; - hbool_t supported = FALSE; + hbool_t supported = FALSE; /* Display attributes */ H5TOOLS_DEBUG("Display attributes"); @@ -2153,16 +2174,17 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " %-10s %lu:%s\n", "Location:", oinfo->fileno, obj_tok_str); h5tools_str_append(&buffer, " %-10s %u\n", "Links:", (unsigned)oinfo->rc); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); H5free_memory(obj_tok_str); /* Modification time */ if (oinfo->mtime > 0) { - char buf[256]; + char buf[256]; struct tm *tm; - if(simple_output_g) + if (simple_output_g) tm = HDgmtime(&(oinfo->mtime)); else tm = HDlocaltime(&(oinfo->mtime)); @@ -2170,9 +2192,10 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi HDstrftime(buf, sizeof(buf), "%Y-%m-%d %H:%M:%S %Z", tm); h5tools_str_reset(&buffer); h5tools_str_append(&buffer, " %-10s %s\n", "Modified:", buf); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, + (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); } /* end if */ - } /* end if */ + } /* end if */ /* Only emit comments if the VOL connector supports that */ H5VLquery_optional(obj_id, H5VL_SUBCLS_OBJECT, H5VL_NATIVE_OBJECT_GET_COMMENT, &supported); @@ -2186,7 +2209,8 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi * H5Oget_comment again with the correct value. */ if (cmt_bufsize > 0) { - comment = (char *)HDmalloc((size_t)cmt_bufsize + 1); /* new_size including null terminator */ + comment = + (char *)HDmalloc((size_t)cmt_bufsize + 1); /* new_size including null terminator */ if (comment) { cmt_bufsize = H5Oget_comment(obj_id, comment, (size_t)cmt_bufsize); if (cmt_bufsize > 0) { @@ -2195,7 +2219,8 @@ list_obj(const char *name, const H5O_info2_t *oinfo, const char *first_seen, voi h5tools_str_append(&buffer, " %-10s \"", "Comment:"); print_string(&buffer, comment, FALSE); h5tools_str_append(&buffer, "\"\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, + (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); } /* end if */ HDfree(comment); } @@ -2216,7 +2241,8 @@ done: if (iter->symlink_target) { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, "}\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); iter->symlink_target = FALSE; } h5tools_str_close(&buffer); @@ -2226,7 +2252,6 @@ done: return 0; } /* end list_obj() */ - /*------------------------------------------------------------------------- * Function: list_lnk * @@ -2239,14 +2264,14 @@ done: static herr_t list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) { - char *buf = NULL; - iter_t *iter = (iter_t*)_iter; - int ret; - hsize_t curr_pos = 0; /* total data element position */ - h5tool_link_info_t lnk_info; - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + char * buf = NULL; + iter_t * iter = (iter_t *)_iter; + int ret; + hsize_t curr_pos = 0; /* total data element position */ + h5tool_link_info_t lnk_info; + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2258,17 +2283,17 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) /* if verbose, make H5tools_get_symlink_info() display more */ if (verbose_g) - lnk_info.opt.msg_mode=1; + lnk_info.opt.msg_mode = 1; /* Print the link's name, either full name or base name */ print_obj_name(&buffer, iter, name, ""); - switch(linfo->type) { + switch (linfo->type) { case H5L_TYPE_SOFT: ret = H5tools_get_symlink_info(iter->fid, name, &lnk_info, follow_symlink_g); /* lnk_info.trg_path is malloced in H5tools_get_symlink_info() * so it will be freed via buf later */ - buf = (char*)lnk_info.trg_path; + buf = (char *)lnk_info.trg_path; /* error */ if (ret < 0) goto done; @@ -2279,7 +2304,8 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) h5tools_str_append(&buffer, "Soft Link {"); h5tools_str_append(&buffer, buf); h5tools_str_append(&buffer, "}"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); if (follow_symlink_g) { hbool_t orig_grp_literal = grp_literal_g; h5tools_str_reset(&buffer); @@ -2288,10 +2314,12 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) /* Check if we have already seen this softlink */ if (symlink_is_visited(iter->symlink_list, linfo->type, NULL, buf)) { h5tools_str_append(&buffer, "{Already Visited}\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, + (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); goto done; } - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); /* Add this link to the list of seen softlinks */ if (symlink_visit_add(iter->symlink_list, linfo->type, NULL, buf) < 0) @@ -2316,21 +2344,21 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) else { h5tools_str_reset(&buffer); h5tools_str_append(&buffer, "\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); } break; - case H5L_TYPE_EXTERNAL: - { + case H5L_TYPE_EXTERNAL: { const char *filename; const char *path; - hbool_t follow_link = follow_symlink_g || follow_elink_g; + hbool_t follow_link = follow_symlink_g || follow_elink_g; ret = H5tools_get_symlink_info(iter->fid, name, &lnk_info, follow_link); /* lnk_info.trg_path is malloced in H5tools_get_symlink_info() * so it will be freed via buf later */ - buf = (char*)lnk_info.trg_path; + buf = (char *)lnk_info.trg_path; /* error */ if (ret < 0) goto done; @@ -2344,11 +2372,12 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) h5tools_str_append(&buffer, "External Link {"); h5tools_str_append(&buffer, filename); h5tools_str_append(&buffer, "/"); - if(*path != '/') + if (*path != '/') h5tools_str_append(&buffer, "/"); h5tools_str_append(&buffer, path); h5tools_str_append(&buffer, "}"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); /* Recurse through the external link */ /* keep the follow_elink_g for backward compatibility with -E */ @@ -2360,10 +2389,12 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) /* Check if we have already seen this elink */ if (symlink_is_visited(iter->symlink_list, linfo->type, filename, path)) { h5tools_str_append(&buffer, "{Already Visited}\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, + (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); goto done; } - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); /* Add this link to the list of seen elinks */ if (symlink_visit_add(iter->symlink_list, linfo->type, filename, path) < 0) { @@ -2389,15 +2420,15 @@ list_lnk(const char *name, const H5L_info2_t *linfo, void *_iter) } else PRINTVALSTREAM(rawoutstream, "\n"); - } - break; + } break; case H5L_TYPE_ERROR: case H5L_TYPE_HARD: case H5L_TYPE_MAX: default: h5tools_str_append(&buffer, "UD Link {cannot follow UD links}\n"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); break; } /* end switch */ @@ -2409,7 +2440,6 @@ done: return 0; } /* end list_lnk() */ - /*------------------------------------------------------------------------- * Function: visit_obj * @@ -2422,12 +2452,12 @@ done: static herr_t visit_obj(hid_t file, const char *oname, iter_t *iter) { - int retval = 0; - H5O_info2_t oi; /* Information for object */ - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + int retval = 0; + H5O_info2_t oi; /* Information for object */ + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); @@ -2435,14 +2465,15 @@ visit_obj(hid_t file, const char *oname, iter_t *iter) h5tools_str_reset(&buffer); /* Retrieve info for object to list */ - if (H5Oget_info_by_name3(file, oname, &oi, H5O_INFO_BASIC|H5O_INFO_TIME, H5P_DEFAULT) < 0) { + if (H5Oget_info_by_name3(file, oname, &oi, H5O_INFO_BASIC | H5O_INFO_TIME, H5P_DEFAULT) < 0) { if (iter->symlink_target) { h5tools_str_append(&buffer, "{**NOT FOUND**}\n"); iter->symlink_target = FALSE; } else print_obj_name(&buffer, iter, oname, "**NOT FOUND**"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); retval = -1; goto done; } /* end if */ @@ -2452,18 +2483,20 @@ visit_obj(hid_t file, const char *oname, iter_t *iter) /* Get ID for group */ if (!iter->symlink_target && (iter->gid = H5Gopen2(file, oname, H5P_DEFAULT)) < 0) { h5tools_str_append(&buffer, "%s: unable to open '%s' as group\n", iter->fname, oname); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); - goto done; /* Previously "continue", when this code was in main(). - * We don't "continue" here in order to close the file - * and free the file name properly. */ - } /* end if */ + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); + goto done; /* Previously "continue", when this code was in main(). + * We don't "continue" here in order to close the file + * and free the file name properly. */ + } /* end if */ /* Delay specifying the name start point so the original object name is * displayed if it is a link or non-group object */ iter->name_start = iter->base_len; /* Specified name is a group. List the complete contents of the group. */ - h5trav_visit(file, oname, (hbool_t) (display_root_g || iter->symlink_target), recursive_g, list_obj, list_lnk, iter, H5O_INFO_BASIC|H5O_INFO_TIME); + h5trav_visit(file, oname, (hbool_t)(display_root_g || iter->symlink_target), recursive_g, list_obj, + list_lnk, iter, H5O_INFO_BASIC | H5O_INFO_TIME); /* Close group */ if (!iter->symlink_target) @@ -2483,7 +2516,6 @@ done: return retval; } - /*------------------------------------------------------------------------- * Function: get_width * @@ -2499,7 +2531,7 @@ done: static int get_width(void) { - int width = 80; /*the default */ + int width = 80; /*the default */ char *s; /* Try to get it from the COLUMNS environment variable first since it's @@ -2539,14 +2571,14 @@ get_width(void) { /* Unix with ioctl(TIOCGWINSZ) */ struct winsize w; - if (ioctl(2, (int)TIOCGWINSZ, &w)>=0 && w.ws_col>0) + if (ioctl(2, (int)TIOCGWINSZ, &w) >= 0 && w.ws_col > 0) width = w.ws_col; } #elif defined(H5_HAVE_TIOCGETD) && defined(H5_HAVE_IOCTL) { /* Unix with ioctl(TIOCGETD) */ struct uwdata w; - if (ioctl(2, WIOCGETD, &w)>=0 && w.uw_width>0) + if (ioctl(2, WIOCGETD, &w) >= 0 && w.uw_width > 0) width = w.uw_width / w.uw_hs; } #endif @@ -2577,7 +2609,8 @@ is_valid_args(void) } if (no_dangling_link_g && !follow_symlink_g) { - HDfprintf(rawerrorstream, "Error: --no-dangling-links must be used along with --follow-symlinks option!\n\n"); + HDfprintf(rawerrorstream, + "Error: --no-dangling-links must be used along with --follow-symlinks option!\n\n"); ret = FALSE; goto out; } @@ -2586,7 +2619,6 @@ out: return ret; } - /*------------------------------------------------------------------------- * Function: leave * @@ -2603,7 +2635,6 @@ leave(int ret) HDexit(ret); } - /*------------------------------------------------------------------------- * Function: main * @@ -2616,17 +2647,17 @@ leave(int ret) int main(int argc, const char *argv[]) { - hid_t file_id = H5I_INVALID_HID; - char *fname = NULL, *oname = NULL, *x; - const char *s = NULL; - char *rest; - int argno; - static char root_name[] = "/"; - char drivername[50]; - const char *preferred_driver = NULL; - int err_exit = 0; - hid_t fapl_id = H5P_DEFAULT; - hbool_t custom_vol_fapl = FALSE; + hid_t file_id = H5I_INVALID_HID; + char * fname = NULL, *oname = NULL, *x; + const char * s = NULL; + char * rest; + int argno; + static char root_name[] = "/"; + char drivername[50]; + const char * preferred_driver = NULL; + int err_exit = 0; + hid_t fapl_id = H5P_DEFAULT; + hbool_t custom_vol_fapl = FALSE; h5tools_vol_info_t vol_info; #ifdef H5_HAVE_ROS3_VFD @@ -2683,12 +2714,12 @@ main(int argc, const char *argv[]) else if (!HDstrcmp(argv[argno], "--address")) { address_g = TRUE; } - else if(!HDstrcmp(argv[argno], "--data")) { + else if (!HDstrcmp(argv[argno], "--data")) { data_g = TRUE; } else if (!HDstrcmp(argv[argno], "--enable-error-stack")) { enable_error_stack = 1; - /* deprecated --errors */ + /* deprecated --errors */ } else if (!HDstrcmp(argv[argno], "--errors")) { enable_error_stack = 1; @@ -2713,7 +2744,7 @@ main(int argc, const char *argv[]) } else if (!HDstrcmp(argv[argno], "--recursive")) { recursive_g = TRUE; - fullname_g = TRUE; + fullname_g = TRUE; } else if (!HDstrcmp(argv[argno], "--simple")) { simple_output_g = TRUE; @@ -2722,23 +2753,23 @@ main(int argc, const char *argv[]) string_g = TRUE; } else if (!HDstrncmp(argv[argno], "--vfd=", (size_t)6)) { - preferred_driver = argv[argno]+6; + preferred_driver = argv[argno] + 6; } else if (!HDstrncmp(argv[argno], "--vol-value=", (size_t)12)) { - vol_info.type = VOL_BY_VALUE; - vol_info.u.value = (H5VL_class_value_t)HDatoi(argv[argno]+12); - custom_vol_fapl = TRUE; + vol_info.type = VOL_BY_VALUE; + vol_info.u.value = (H5VL_class_value_t)HDatoi(argv[argno] + 12); + custom_vol_fapl = TRUE; } else if (!HDstrncmp(argv[argno], "--vol-name=", (size_t)11)) { - vol_info.type = VOL_BY_NAME; - vol_info.u.name = argv[argno]+11; + vol_info.type = VOL_BY_NAME; + vol_info.u.name = argv[argno] + 11; custom_vol_fapl = TRUE; } else if (!HDstrncmp(argv[argno], "--vol-info=", (size_t)11)) { - vol_info.info_string = argv[argno]+11; + vol_info.info_string = argv[argno] + 11; } else if (!HDstrncmp(argv[argno], "--width=", (size_t)8)) { - width_g = (int)HDstrtol(argv[argno]+8, &rest, 0); + width_g = (int)HDstrtol(argv[argno] + 8, &rest, 0); if (0 == width_g) no_line_wrap_g = TRUE; @@ -2784,14 +2815,13 @@ main(int argc, const char *argv[]) } width_g = (int)HDstrtol(s, &rest, 0); - if(0 == width_g) { + if (0 == width_g) { no_line_wrap_g = TRUE; } - else if(width_g < 0 || *rest) { + else if (width_g < 0 || *rest) { usage(); leave(EXIT_FAILURE); } - } else if (!HDstrncmp(argv[argno], "--s3-cred=", (size_t)10)) { #ifdef H5_HAVE_ROS3_VFD @@ -2799,7 +2829,8 @@ main(int argc, const char *argv[]) start = strchr(argv[argno], '='); if (start == NULL) { - HDfprintf(rawerrorstream, "Error: Unable to parse null credentials tuple\n" + HDfprintf(rawerrorstream, + "Error: Unable to parse null credentials tuple\n" " For anonymous access, omit \"--s3-cred\" and use only \"--vfd=ros3\"\n\n"); usage(); leave(EXIT_FAILURE); @@ -2821,8 +2852,8 @@ main(int argc, const char *argv[]) #ifdef H5_HAVE_LIBHDFS char const *start = NULL; - start = argv[argno]+13; /* should never segfault: worst case of */ - if (*start != '(') { /* null-termintor after '='. */ + start = argv[argno] + 13; /* should never segfault: worst case of */ + if (*start != '(') { /* null-termintor after '='. */ usage(); leave(EXIT_FAILURE); } @@ -2838,10 +2869,10 @@ main(int argc, const char *argv[]) leave(EXIT_FAILURE); #endif } - else if('-'!=argv[argno][1]) { + else if ('-' != argv[argno][1]) { /* Single-letter switches */ - for(s = argv[argno] + 1; *s; s++) { - switch(*s) { + for (s = argv[argno] + 1; *s; s++) { + switch (*s) { case '?': case 'h': /* --help */ usage(); @@ -2879,7 +2910,7 @@ main(int argc, const char *argv[]) case 'r': /* --recursive */ recursive_g = TRUE; - fullname_g = TRUE; + fullname_g = TRUE; break; case 'S': /* --simple */ @@ -2907,7 +2938,7 @@ main(int argc, const char *argv[]) usage(); leave(EXIT_FAILURE); } /* end switch */ - } /* end for */ + } /* end for */ } else { HDfprintf(stderr, "Unknown argument: %s\n", argv[argno]); @@ -2943,8 +2974,8 @@ main(int argc, const char *argv[]) if (preferred_driver) { h5tools_vfd_info_t vfd_info; - vfd_info.info = NULL; - vfd_info.name = preferred_driver; + vfd_info.info = NULL; + vfd_info.name = preferred_driver; if (!HDstrcmp(preferred_driver, drivernames[ROS3_VFD_IDX])) { #ifdef H5_HAVE_ROS3_VFD @@ -2981,29 +3012,29 @@ main(int argc, const char *argv[]) * chops off the last component. If we reach the beginning of the name * then there must have been something wrong with the file (perhaps it * doesn't exist). */ - show_file_name_g = (argc-argno > 1); /*show file names if more than one*/ - while(argno < argc) { - H5L_info2_t li; - iter_t iter; + show_file_name_g = (argc - argno > 1); /*show file names if more than one*/ + while (argno < argc) { + H5L_info2_t li; + iter_t iter; symlink_trav_t symlink_list; - size_t u; + size_t u; - fname = HDstrdup(argv[argno++]); - oname = NULL; + fname = HDstrdup(argv[argno++]); + oname = NULL; file_id = H5I_INVALID_HID; while (fname && *fname) { - file_id = h5tools_fopen(fname, H5F_ACC_RDONLY, fapl_id, - (fapl_id == H5P_DEFAULT) ? FALSE : TRUE, drivername, sizeof drivername); + file_id = h5tools_fopen(fname, H5F_ACC_RDONLY, fapl_id, (fapl_id == H5P_DEFAULT) ? FALSE : TRUE, + drivername, sizeof drivername); if (file_id >= 0) { if (verbose_g) PRINTSTREAM(rawoutstream, "Opened \"%s\" with %s driver.\n", fname, drivername); break; /*success*/ - } /* end if */ + } /* end if */ /* Shorten the file name; lengthen the object name */ - x = oname; + x = oname; oname = HDstrrchr(fname, '/'); if (x) *x = '/'; @@ -3013,7 +3044,7 @@ main(int argc, const char *argv[]) } /* end while */ if (file_id < 0) { - HDfprintf(rawerrorstream, "%s: unable to open file\n", argv[argno-1]); + HDfprintf(rawerrorstream, "%s: unable to open file\n", argv[argno - 1]); HDfree(fname); err_exit = 1; continue; @@ -3021,9 +3052,9 @@ main(int argc, const char *argv[]) if (oname) { /* Always use absolute paths to avoid confusion, keep track of where * to begin path name output */ - *oname = '/'; + *oname = '/'; iter.base_len = HDstrlen(oname); - iter.base_len -= oname[iter.base_len-1] == '/'; + iter.base_len -= oname[iter.base_len - 1] == '/'; x = oname; if (NULL == (oname = HDstrdup(oname))) { HDfprintf(rawerrorstream, "memory allocation failed\n"); @@ -3038,42 +3069,43 @@ main(int argc, const char *argv[]) oname = root_name; if (recursive_g) display_root_g = TRUE; - iter.base_len = 0; + iter.base_len = 0; iter.name_start = 0; /* Use x to remember if we have allocated space in oname */ x = NULL; } /* end if */ /* Remember the file information for later */ - iter.fname = fname; - iter.fid = file_id; - iter.gid = H5I_INVALID_HID; - iter.symlink_target = FALSE; - iter.symlink_list = &symlink_list; + iter.fname = fname; + iter.fid = file_id; + iter.gid = H5I_INVALID_HID; + iter.symlink_target = FALSE; + iter.symlink_list = &symlink_list; iter.symlink_list->dangle_link = FALSE; /* Initialize list of visited symbolic links */ symlink_list.nused = symlink_list.nalloc = 0; - symlink_list.objs = NULL; + symlink_list.objs = NULL; /* Check for root group as object name */ if (HDstrcmp(oname, root_name)) { /* Check the type of link given */ if (H5Lget_info2(file_id, oname, &li, H5P_DEFAULT) < 0) { - hsize_t curr_pos = 0; /* total data element position */ - h5tools_str_t buffer; /* string into which to render */ - h5tools_context_t ctx; /* print context */ - h5tool_format_t *info = &ls_dataformat; + hsize_t curr_pos = 0; /* total data element position */ + h5tools_str_t buffer; /* string into which to render */ + h5tools_context_t ctx; /* print context */ + h5tool_format_t * info = &ls_dataformat; HDmemset(&ctx, 0, sizeof(ctx)); HDmemset(&buffer, 0, sizeof(h5tools_str_t)); h5tools_str_reset(&buffer); print_obj_name(&buffer, &iter, oname, "**NOT FOUND**"); - h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, (hsize_t)0, (hsize_t)0); + h5tools_render_element(rawoutstream, info, &ctx, &buffer, &curr_pos, (size_t)info->line_ncols, + (hsize_t)0, (hsize_t)0); leave(EXIT_FAILURE); } /* end if */ - } /* end if */ + } /* end if */ else li.type = H5L_TYPE_HARD; @@ -3119,4 +3151,3 @@ main(int argc, const char *argv[]) else leave(EXIT_SUCCESS); } /* end main() */ - |