diff options
Diffstat (limited to 'tools/src/h5repack/h5repack_main.c')
| -rw-r--r-- | tools/src/h5repack/h5repack_main.c | 410 |
1 files changed, 226 insertions, 184 deletions
diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c index cf0c611..c38dd66 100644 --- a/tools/src/h5repack/h5repack_main.c +++ b/tools/src/h5repack/h5repack_main.c @@ -18,60 +18,57 @@ /* Name of tool */ #define PROGRAMNAME "h5repack" -static int parse_command_line(int argc, const char **argv, pack_opt_t* options); +static int parse_command_line(int argc, const char **argv, pack_opt_t *options); static void leave(int ret) H5_ATTR_NORETURN; - /* module-scoped variables */ -static int has_i = 0; -static int has_o = 0; -const char *infile = NULL; +static int has_i = 0; +static int has_o = 0; +const char *infile = NULL; const char *outfile = NULL; /* * Command-line options: The user can specify short or long-named * parameters. */ -static const char *s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW1:2:3:4:5:6:"; -static struct long_options l_opts[] = { - { "alignment", require_arg, 'a' }, - { "block", require_arg, 'b' }, - { "compact", require_arg, 'c' }, - { "indexed", require_arg, 'd' }, - { "file", require_arg, 'e' }, - { "filter", require_arg, 'f' }, - { "help", no_arg, 'h' }, - { "infile", require_arg, 'i' }, /* for backward compability */ - { "low", require_arg, 'j' }, - { "high", require_arg, 'k' }, - { "layout", require_arg, 'l' }, - { "minimum", require_arg, 'm' }, - { "native", no_arg, 'n' }, - { "outfile", require_arg, 'o' }, /* for backward compability */ - { "sort_by", require_arg, 'q' }, - { "ssize", require_arg, 's' }, - { "threshold", require_arg, 't' }, - { "ublock", require_arg, 'u' }, - { "verbose", no_arg, 'v' }, - { "sort_order", require_arg, 'z' }, - { "enable-error-stack", no_arg, 'E' }, - { "fs_pagesize", require_arg, 'G' }, - { "latest", no_arg, 'L' }, - { "metadata_block_size", require_arg, 'M' }, - { "fs_persist", require_arg, 'P' }, - { "fs_strategy", require_arg, 'S' }, - { "fs_threshold", require_arg, 'T' }, - { "version", no_arg, 'V' }, - { "merge", no_arg, 'X' }, - { "prune", no_arg, 'W' }, - { "src-vol-value", require_arg, '1' }, - { "src-vol-name", require_arg, '2' }, - { "src-vol-info", require_arg, '3' }, - { "dst-vol-value", require_arg, '4' }, - { "dst-vol-name", require_arg, '5' }, - { "dst-vol-info", require_arg, '6' }, - { NULL, 0, '\0' } -}; +static const char * s_opts = "a:b:c:d:e:f:hi:j:k:l:m:no:q:s:t:u:vz:EG:LM:P:S:T:VXW1:2:3:4:5:6:"; +static struct long_options l_opts[] = {{"alignment", require_arg, 'a'}, + {"block", require_arg, 'b'}, + {"compact", require_arg, 'c'}, + {"indexed", require_arg, 'd'}, + {"file", require_arg, 'e'}, + {"filter", require_arg, 'f'}, + {"help", no_arg, 'h'}, + {"infile", require_arg, 'i'}, /* for backward compability */ + {"low", require_arg, 'j'}, + {"high", require_arg, 'k'}, + {"layout", require_arg, 'l'}, + {"minimum", require_arg, 'm'}, + {"native", no_arg, 'n'}, + {"outfile", require_arg, 'o'}, /* for backward compability */ + {"sort_by", require_arg, 'q'}, + {"ssize", require_arg, 's'}, + {"threshold", require_arg, 't'}, + {"ublock", require_arg, 'u'}, + {"verbose", no_arg, 'v'}, + {"sort_order", require_arg, 'z'}, + {"enable-error-stack", no_arg, 'E'}, + {"fs_pagesize", require_arg, 'G'}, + {"latest", no_arg, 'L'}, + {"metadata_block_size", require_arg, 'M'}, + {"fs_persist", require_arg, 'P'}, + {"fs_strategy", require_arg, 'S'}, + {"fs_threshold", require_arg, 'T'}, + {"version", no_arg, 'V'}, + {"merge", no_arg, 'X'}, + {"prune", no_arg, 'W'}, + {"src-vol-value", require_arg, '1'}, + {"src-vol-name", require_arg, '2'}, + {"src-vol-info", require_arg, '3'}, + {"dst-vol-value", require_arg, '4'}, + {"dst-vol-name", require_arg, '5'}, + {"dst-vol-info", require_arg, '6'}, + {NULL, 0, '\0'}}; /*------------------------------------------------------------------------- * Function: usage @@ -82,7 +79,9 @@ static struct long_options l_opts[] = { * *------------------------------------------------------------------------- */ -static void usage(const char *prog) { +static void +usage(const char *prog) +{ FLUSHSTREAM(rawoutstream); PRINTSTREAM(rawoutstream, "usage: %s [OPTIONS] file1 file2\n", prog); PRINTVALSTREAM(rawoutstream, " file1 Input HDF5 File\n"); @@ -92,105 +91,140 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " -v, --verbose Verbose mode, print object information\n"); PRINTVALSTREAM(rawoutstream, " -V, --version Print version number and exit\n"); PRINTVALSTREAM(rawoutstream, " -n, --native Use a native HDF5 type when repacking\n"); - PRINTVALSTREAM(rawoutstream, " --enable-error-stack Prints messages from the HDF5 error stack as they\n"); + PRINTVALSTREAM(rawoutstream, + " --enable-error-stack Prints messages from the HDF5 error stack as they\n"); PRINTVALSTREAM(rawoutstream, " occur\n"); - PRINTVALSTREAM(rawoutstream, " --src-vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, + " --src-vol-value Value (ID) of the VOL connector to use for opening the\n"); PRINTVALSTREAM(rawoutstream, " input HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --src-vol-name Name of the VOL connector to use for opening the input\n"); + PRINTVALSTREAM(rawoutstream, + " --src-vol-name Name of the VOL connector to use for opening the input\n"); PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --src-vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, + " --src-vol-info VOL-specific info to pass to the VOL connector used for\n"); PRINTVALSTREAM(rawoutstream, " opening the input HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --dst-vol-value Value (ID) of the VOL connector to use for opening the\n"); + PRINTVALSTREAM(rawoutstream, + " --dst-vol-value Value (ID) of the VOL connector to use for opening the\n"); PRINTVALSTREAM(rawoutstream, " output HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --dst-vol-name Name of the VOL connector to use for opening the output\n"); + PRINTVALSTREAM(rawoutstream, + " --dst-vol-name Name of the VOL connector to use for opening the output\n"); PRINTVALSTREAM(rawoutstream, " HDF5 file specified\n"); - PRINTVALSTREAM(rawoutstream, " --dst-vol-info VOL-specific info to pass to the VOL connector used for\n"); + PRINTVALSTREAM(rawoutstream, + " --dst-vol-info VOL-specific info to pass to the VOL connector used for\n"); PRINTVALSTREAM(rawoutstream, " opening the output HDF5 file specified\n"); PRINTVALSTREAM(rawoutstream, " -L, --latest Use latest version of file format\n"); - PRINTVALSTREAM(rawoutstream, " This option will take precedence over the options\n"); + PRINTVALSTREAM(rawoutstream, + " This option will take precedence over the options\n"); PRINTVALSTREAM(rawoutstream, " --low and --high\n"); - PRINTVALSTREAM(rawoutstream, " --low=BOUND The low bound for library release versions to use\n"); + PRINTVALSTREAM(rawoutstream, + " --low=BOUND The low bound for library release versions to use\n"); PRINTVALSTREAM(rawoutstream, " when creating objects in the file\n"); PRINTVALSTREAM(rawoutstream, " (default is H5F_LIBVER_EARLIEST)\n"); - PRINTVALSTREAM(rawoutstream, " --high=BOUND The high bound for library release versions to use\n"); + PRINTVALSTREAM(rawoutstream, + " --high=BOUND The high bound for library release versions to use\n"); PRINTVALSTREAM(rawoutstream, " when creating objects in the file\n"); PRINTVALSTREAM(rawoutstream, " (default is H5F_LIBVER_LATEST)\n"); - PRINTVALSTREAM(rawoutstream, " --merge Follow external soft link recursively and merge data\n"); - PRINTVALSTREAM(rawoutstream, " --prune Do not follow external soft links and remove link\n"); - PRINTVALSTREAM(rawoutstream, " --merge --prune Follow external link, merge data and remove dangling link\n"); + PRINTVALSTREAM(rawoutstream, + " --merge Follow external soft link recursively and merge data\n"); + PRINTVALSTREAM(rawoutstream, + " --prune Do not follow external soft links and remove link\n"); + PRINTVALSTREAM(rawoutstream, + " --merge --prune Follow external link, merge data and remove dangling link\n"); PRINTVALSTREAM(rawoutstream, " -c L1, --compact=L1 Maximum number of links in header messages\n"); - PRINTVALSTREAM(rawoutstream, " -d L2, --indexed=L2 Minimum number of links in the indexed format\n"); + PRINTVALSTREAM(rawoutstream, + " -d L2, --indexed=L2 Minimum number of links in the indexed format\n"); PRINTVALSTREAM(rawoutstream, " -s S[:F], --ssize=S[:F] Shared object header message minimum size\n"); - PRINTVALSTREAM(rawoutstream, " -m M, --minimum=M Do not apply the filter to datasets smaller than M\n"); + PRINTVALSTREAM(rawoutstream, + " -m M, --minimum=M Do not apply the filter to datasets smaller than M\n"); PRINTVALSTREAM(rawoutstream, " -e E, --file=E Name of file E with the -f and -l options\n"); - PRINTVALSTREAM(rawoutstream, " -u U, --ublock=U Name of file U with user block data to be added\n"); + PRINTVALSTREAM(rawoutstream, + " -u U, --ublock=U Name of file U with user block data to be added\n"); PRINTVALSTREAM(rawoutstream, " -b B, --block=B Size of user block to be added\n"); - PRINTVALSTREAM(rawoutstream, " -M A, --metadata_block_size=A Metadata block size for H5Pset_meta_block_size\n"); + PRINTVALSTREAM(rawoutstream, + " -M A, --metadata_block_size=A Metadata block size for H5Pset_meta_block_size\n"); PRINTVALSTREAM(rawoutstream, " -t T, --threshold=T Threshold value for H5Pset_alignment\n"); PRINTVALSTREAM(rawoutstream, " -a A, --alignment=A Alignment value for H5Pset_alignment\n"); PRINTVALSTREAM(rawoutstream, " -q Q, --sort_by=Q Sort groups and attributes by index Q\n"); PRINTVALSTREAM(rawoutstream, " -z Z, --sort_order=Z Sort groups and attributes by order Z\n"); PRINTVALSTREAM(rawoutstream, " -f FILT, --filter=FILT Filter type\n"); PRINTVALSTREAM(rawoutstream, " -l LAYT, --layout=LAYT Layout type\n"); - PRINTVALSTREAM(rawoutstream, " -S FS_STRATEGY, --fs_strategy=FS_STRATEGY File space management strategy for\n"); + PRINTVALSTREAM(rawoutstream, + " -S FS_STRATEGY, --fs_strategy=FS_STRATEGY File space management strategy for\n"); PRINTVALSTREAM(rawoutstream, " H5Pset_file_space_strategy\n"); - PRINTVALSTREAM(rawoutstream, " -P FS_PERSIST, --fs_persist=FS_PERSIST Persisting or not persisting free-\n"); + PRINTVALSTREAM(rawoutstream, + " -P FS_PERSIST, --fs_persist=FS_PERSIST Persisting or not persisting free-\n"); PRINTVALSTREAM(rawoutstream, " space for H5Pset_file_space_strategy\n"); - PRINTVALSTREAM(rawoutstream, " -T FS_THRESHOLD, --fs_threshold=FS_THRESHOLD Free-space section threshold\n"); + PRINTVALSTREAM(rawoutstream, + " -T FS_THRESHOLD, --fs_threshold=FS_THRESHOLD Free-space section threshold\n"); PRINTVALSTREAM(rawoutstream, " for H5Pset_file_space_strategy\n"); PRINTVALSTREAM(rawoutstream, " -G FS_PAGESIZE, --fs_pagesize=FS_PAGESIZE File space page size for\n"); PRINTVALSTREAM(rawoutstream, " H5Pset_file_space_page_size\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " M - is an integer greater than 1, size of dataset in bytes (default is 0)\n"); + PRINTVALSTREAM(rawoutstream, + " M - is an integer greater than 1, size of dataset in bytes (default is 0)\n"); PRINTVALSTREAM(rawoutstream, " E - is a filename.\n"); PRINTVALSTREAM(rawoutstream, " S - is an integer\n"); PRINTVALSTREAM(rawoutstream, " U - is a filename.\n"); PRINTVALSTREAM(rawoutstream, " T - is an integer\n"); PRINTVALSTREAM(rawoutstream, " A - is an integer greater than zero\n"); - PRINTVALSTREAM(rawoutstream, " Q - is the sort index type for the input file. It can be \"name\" or\n"); + PRINTVALSTREAM(rawoutstream, + " Q - is the sort index type for the input file. It can be \"name\" or\n"); PRINTVALSTREAM(rawoutstream, " \"creation_order\" (default)\n"); - PRINTVALSTREAM(rawoutstream, " Z - is the sort order type for the input file. It can be \"descending\" or\n"); + PRINTVALSTREAM(rawoutstream, + " Z - is the sort order type for the input file. It can be \"descending\" or\n"); PRINTVALSTREAM(rawoutstream, " \"ascending\" (default)\n"); PRINTVALSTREAM(rawoutstream, " B - is the user block size, any value that is 512 or greater and is\n"); PRINTVALSTREAM(rawoutstream, " a power of 2 (1024 default)\n"); - PRINTVALSTREAM(rawoutstream, " F - is the shared object header message type, any of <dspace|dtype|fill|\n"); + PRINTVALSTREAM(rawoutstream, + " F - is the shared object header message type, any of <dspace|dtype|fill|\n"); PRINTVALSTREAM(rawoutstream, " pline|attr>. If F is not specified, S applies to all messages\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " BOUND is an integer indicating the library release versions to use when\n"); + PRINTVALSTREAM(rawoutstream, + " BOUND is an integer indicating the library release versions to use when\n"); PRINTVALSTREAM(rawoutstream, " creating objects in the file (see H5Pset_libver_bounds()):\n"); PRINTVALSTREAM(rawoutstream, " 0: This is H5F_LIBVER_EARLIEST in H5F_libver_t struct\n"); PRINTVALSTREAM(rawoutstream, " 1: This is H5F_LIBVER_V18 in H5F_libver_t struct\n"); PRINTVALSTREAM(rawoutstream, " 2: This is H5F_LIBVER_V110 in H5F_libver_t struct\n"); PRINTVALSTREAM(rawoutstream, " 3: This is H5F_LIBVER_V112 in H5F_libver_t struct\n"); PRINTVALSTREAM(rawoutstream, " 4: This is H5F_LIBVER_V114 in H5F_libver_t struct\n"); - PRINTVALSTREAM(rawoutstream, " (H5F_LIBVER_LATEST is aliased to H5F_LIBVER_V114 for this release\n"); + PRINTVALSTREAM(rawoutstream, + " (H5F_LIBVER_LATEST is aliased to H5F_LIBVER_V114 for this release\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " FS_STRATEGY is a string indicating the file space strategy used:\n"); PRINTVALSTREAM(rawoutstream, " FSM_AGGR:\n"); - PRINTVALSTREAM(rawoutstream, " The mechanisms used in managing file space are free-space\n"); + PRINTVALSTREAM(rawoutstream, + " The mechanisms used in managing file space are free-space\n"); PRINTVALSTREAM(rawoutstream, " managers, aggregators and virtual file driver.\n"); PRINTVALSTREAM(rawoutstream, " PAGE:\n"); - PRINTVALSTREAM(rawoutstream, " The mechanisms used in managing file space are free-space\n"); - PRINTVALSTREAM(rawoutstream, " managers with embedded paged aggregation and virtual file driver.\n"); + PRINTVALSTREAM(rawoutstream, + " The mechanisms used in managing file space are free-space\n"); + PRINTVALSTREAM(rawoutstream, + " managers with embedded paged aggregation and virtual file driver.\n"); PRINTVALSTREAM(rawoutstream, " AGGR:\n"); - PRINTVALSTREAM(rawoutstream, " The mechanisms used in managing file space are aggregators and\n"); + PRINTVALSTREAM(rawoutstream, + " The mechanisms used in managing file space are aggregators and\n"); PRINTVALSTREAM(rawoutstream, " virtual file driver.\n"); PRINTVALSTREAM(rawoutstream, " NONE:\n"); - PRINTVALSTREAM(rawoutstream, " The mechanisms used in managing file space are virtual file\n"); + PRINTVALSTREAM(rawoutstream, + " The mechanisms used in managing file space are virtual file\n"); PRINTVALSTREAM(rawoutstream, " driver.\n"); - PRINTVALSTREAM(rawoutstream, " The default strategy when not set is FSM_AGGR without persisting free-\n"); + PRINTVALSTREAM(rawoutstream, + " The default strategy when not set is FSM_AGGR without persisting free-\n"); PRINTVALSTREAM(rawoutstream, " space.\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " FS_PERSIST is 1 to persisting free-space or 0 to not persisting free-space.\n"); + PRINTVALSTREAM(rawoutstream, + " FS_PERSIST is 1 to persisting free-space or 0 to not persisting free-space.\n"); PRINTVALSTREAM(rawoutstream, " The default when not set is not persisting free-space.\n"); PRINTVALSTREAM(rawoutstream, " The value is ignored for AGGR and NONE strategies.\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " FS_THRESHOLD is the minimum size (in bytes) of free-space sections to be\n"); + PRINTVALSTREAM(rawoutstream, + " FS_THRESHOLD is the minimum size (in bytes) of free-space sections to be\n"); PRINTVALSTREAM(rawoutstream, " tracked by the library.\n"); PRINTVALSTREAM(rawoutstream, " The default when not set is 1.\n"); PRINTVALSTREAM(rawoutstream, " The value is ignored for AGGR and NONE strategies.\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " FS_PAGESIZE is the size (in bytes) >=512 that is used by the library when\n"); + PRINTVALSTREAM(rawoutstream, + " FS_PAGESIZE is the size (in bytes) >=512 that is used by the library when\n"); PRINTVALSTREAM(rawoutstream, " the file space strategy PAGE is used.\n"); PRINTVALSTREAM(rawoutstream, " The default when not set is 4096.\n"); PRINTVALSTREAM(rawoutstream, "\n"); @@ -198,8 +232,10 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " <list of objects>:<name of filter>=<filter parameters>\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " <list of objects> is a comma separated list of object names, meaning apply\n"); - PRINTVALSTREAM(rawoutstream, " compression only to those objects. If no names are specified, the filter\n"); + PRINTVALSTREAM(rawoutstream, + " <list of objects> is a comma separated list of object names, meaning apply\n"); + PRINTVALSTREAM(rawoutstream, + " compression only to those objects. If no names are specified, the filter\n"); PRINTVALSTREAM(rawoutstream, " is applied to all objects\n"); PRINTVALSTREAM(rawoutstream, " <name of filter> can be:\n"); PRINTVALSTREAM(rawoutstream, " GZIP, to apply the HDF5 GZIP filter (GZIP compression)\n"); @@ -212,15 +248,19 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, " NONE, to remove all filters\n"); PRINTVALSTREAM(rawoutstream, " <filter parameters> is optional filter parameter information\n"); PRINTVALSTREAM(rawoutstream, " GZIP=<deflation level> from 1-9\n"); - PRINTVALSTREAM(rawoutstream, " SZIP=<pixels per block,coding> pixels per block is a even number in\n"); + PRINTVALSTREAM(rawoutstream, + " SZIP=<pixels per block,coding> pixels per block is a even number in\n"); PRINTVALSTREAM(rawoutstream, " 2-32 and coding method is either EC or NN\n"); PRINTVALSTREAM(rawoutstream, " SHUF (no parameter)\n"); PRINTVALSTREAM(rawoutstream, " FLET (no parameter)\n"); PRINTVALSTREAM(rawoutstream, " NBIT (no parameter)\n"); - PRINTVALSTREAM(rawoutstream, " SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type\n"); + PRINTVALSTREAM(rawoutstream, + " SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type\n"); PRINTVALSTREAM(rawoutstream, " is either IN or DS\n"); - PRINTVALSTREAM(rawoutstream, " UD=<filter_number,filter_flag,cd_value_count,value1[,value2,...,valueN]>\n"); - PRINTVALSTREAM(rawoutstream, " Required values: filter_number, filter_flag, cd_value_count, value1\n"); + PRINTVALSTREAM(rawoutstream, + " UD=<filter_number,filter_flag,cd_value_count,value1[,value2,...,valueN]>\n"); + PRINTVALSTREAM(rawoutstream, + " Required values: filter_number, filter_flag, cd_value_count, value1\n"); PRINTVALSTREAM(rawoutstream, " Optional values: value2 to valueN\n"); PRINTVALSTREAM(rawoutstream, " NONE (no parameter)\n"); PRINTVALSTREAM(rawoutstream, "\n"); @@ -228,8 +268,10 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, " <list of objects>:<layout type>=<layout parameters>\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " <list of objects> is a comma separated list of object names, meaning that\n"); - PRINTVALSTREAM(rawoutstream, " layout information is supplied for those objects. If no names are\n"); + PRINTVALSTREAM(rawoutstream, + " <list of objects> is a comma separated list of object names, meaning that\n"); + PRINTVALSTREAM(rawoutstream, + " layout information is supplied for those objects. If no names are\n"); PRINTVALSTREAM(rawoutstream, " specified, the layout type is applied to all objects\n"); PRINTVALSTREAM(rawoutstream, " <layout type> can be:\n"); PRINTVALSTREAM(rawoutstream, " CHUNK, to apply chunking layout\n"); @@ -248,11 +290,14 @@ static void usage(const char *prog) { PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, "2) h5repack -v -f dset1:SZIP=8,NN file1 file2\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " SZIP compression with 8 pixels per block and NN coding method to object dset1\n"); + PRINTVALSTREAM(rawoutstream, + " SZIP compression with 8 pixels per block and NN coding method to object dset1\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, "3) h5repack -v -l dset1,dset2:CHUNK=20x10 -f dset3,dset4,dset5:NONE file1 file2\n"); + PRINTVALSTREAM(rawoutstream, + "3) h5repack -v -l dset1,dset2:CHUNK=20x10 -f dset3,dset4,dset5:NONE file1 file2\n"); PRINTVALSTREAM(rawoutstream, "\n"); - PRINTVALSTREAM(rawoutstream, " Chunked layout, with a layout size of 20x10, to objects dset1 and dset2\n"); + PRINTVALSTREAM(rawoutstream, + " Chunked layout, with a layout size of 20x10, to objects dset1 and dset2\n"); PRINTVALSTREAM(rawoutstream, " and remove filters to objects dset3, dset4, dset5\n"); PRINTVALSTREAM(rawoutstream, "\n"); PRINTVALSTREAM(rawoutstream, "4) h5repack -L -c 10 -s 20:dtype file1 file2\n"); @@ -283,7 +328,8 @@ static void usage(const char *prog) { * Return: Does not return *------------------------------------------------------------------------- */ -static void leave(int ret) +static void +leave(int ret) { h5tools_close(); HDexit(ret); @@ -297,15 +343,15 @@ static void leave(int ret) * Return: void, exit on error *------------------------------------------------------------------------- */ -static -int read_info(const char *filename, pack_opt_t *options) +static int +read_info(const char *filename, pack_opt_t *options) { - char stype[10] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0}; - char comp_info[1024]; + char stype[10] = {0, 0, 0, 0, 0, 0, 0, 0, 0, 0}; + char comp_info[1024]; FILE *fp = NULL; - char c; - int i; - int ret_value = EXIT_SUCCESS; + char c; + int i; + int ret_value = EXIT_SUCCESS; if (NULL == (fp = HDfopen(filename, "r"))) { error_msg("cannot open options file %s\n", filename); @@ -320,7 +366,7 @@ int read_info(const char *filename, pack_opt_t *options) break; /* Info indicator must be for layout or filter */ - if (HDstrcmp(stype,"-l") && HDstrcmp(stype, "-f")) { + if (HDstrcmp(stype, "-l") && HDstrcmp(stype, "-f")) { error_msg("bad file format for %s", filename); h5tools_setstatus(EXIT_FAILURE); ret_value = EXIT_FAILURE; @@ -434,16 +480,16 @@ set_sort_order(const char *form) * Purpose: parse command line input *------------------------------------------------------------------------- */ -static -int parse_command_line(int argc, const char **argv, pack_opt_t* options) +static int +parse_command_line(int argc, const char **argv, pack_opt_t *options) { h5tools_vol_info_t in_vol_info; h5tools_vol_info_t out_vol_info; - hbool_t custom_in_fapl = FALSE; - hbool_t custom_out_fapl = FALSE; - hid_t tmp_fapl = H5I_INVALID_HID; - int bound, opt; - int ret_value = 0; + hbool_t custom_in_fapl = FALSE; + hbool_t custom_out_fapl = FALSE; + hid_t tmp_fapl = H5I_INVALID_HID; + int bound, opt; + int ret_value = 0; /* Initialize fapl info structs */ HDmemset(&in_vol_info, 0, sizeof(h5tools_vol_info_t)); @@ -451,7 +497,7 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) /* parse command line options */ while (EOF != (opt = get_option(argc, argv, s_opts, l_opts))) { - switch ((char) opt) { + switch ((char)opt) { /* -i for backward compatibility */ case 'i': @@ -502,8 +548,8 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'm': - options->min_comp = HDstrtoull(opt_arg , NULL, 0); - if ((int) options->min_comp <= 0) { + options->min_comp = HDstrtoull(opt_arg, NULL, 0); + if ((int)options->min_comp <= 0) { error_msg("invalid minimum compress size <%s>\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); ret_value = -1; @@ -559,66 +605,64 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case 'c': - options->grp_compact = HDatoi( opt_arg ); + options->grp_compact = HDatoi(opt_arg); if (options->grp_compact > 0) options->latest = TRUE; /* must use latest format */ break; case 'd': - options->grp_indexed = HDatoi( opt_arg ); + options->grp_indexed = HDatoi(opt_arg); if (options->grp_indexed > 0) options->latest = TRUE; /* must use latest format */ break; - case 's': - { - int idx = 0; - int ssize = 0; - char *msgPtr = HDstrchr(opt_arg, ':'); - options->latest = TRUE; /* must use latest format */ - if (msgPtr == NULL) { - ssize = HDatoi(opt_arg); - for (idx = 0; idx < 5; idx++) - options->msg_size[idx] = ssize; - } - else { - char msgType[10]; - - HDstrcpy(msgType, msgPtr + 1); - msgPtr[0] = '\0'; - ssize = HDatoi( opt_arg ); - if (!HDstrncmp(msgType, "dspace", 6)) - options->msg_size[0] = ssize; - else if (!HDstrncmp(msgType, "dtype", 5)) - options->msg_size[1] = ssize; - else if (!HDstrncmp(msgType, "fill", 4)) - options->msg_size[2] = ssize; - else if (!HDstrncmp(msgType, "pline", 5)) - options->msg_size[3] = ssize; - else if (!HDstrncmp(msgType, "attr", 4)) - options->msg_size[4] = ssize; - } + case 's': { + int idx = 0; + int ssize = 0; + char *msgPtr = HDstrchr(opt_arg, ':'); + options->latest = TRUE; /* must use latest format */ + if (msgPtr == NULL) { + ssize = HDatoi(opt_arg); + for (idx = 0; idx < 5; idx++) + options->msg_size[idx] = ssize; } - break; + else { + char msgType[10]; + + HDstrcpy(msgType, msgPtr + 1); + msgPtr[0] = '\0'; + ssize = HDatoi(opt_arg); + if (!HDstrncmp(msgType, "dspace", 6)) + options->msg_size[0] = ssize; + else if (!HDstrncmp(msgType, "dtype", 5)) + options->msg_size[1] = ssize; + else if (!HDstrncmp(msgType, "fill", 4)) + options->msg_size[2] = ssize; + else if (!HDstrncmp(msgType, "pline", 5)) + options->msg_size[3] = ssize; + else if (!HDstrncmp(msgType, "attr", 4)) + options->msg_size[4] = ssize; + } + } break; case 'u': options->ublock_filename = opt_arg; break; case 'b': - options->ublock_size = (hsize_t) HDatol( opt_arg ); + options->ublock_size = (hsize_t)HDatol(opt_arg); break; case 'M': - options->meta_block_size = (hsize_t) HDatol( opt_arg ); + options->meta_block_size = (hsize_t)HDatol(opt_arg); break; case 't': - options->threshold = (hsize_t) HDatol( opt_arg ); + options->threshold = (hsize_t)HDatol(opt_arg); break; case 'a': - options->alignment = HDstrtoull(opt_arg , NULL, 0); + options->alignment = HDstrtoull(opt_arg, NULL, 0); if (options->alignment < 1) { error_msg("invalid alignment size\n", opt_arg); h5tools_setstatus(EXIT_FAILURE); @@ -627,30 +671,28 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) } break; - case 'S': - { - char strategy[MAX_NC_NAME]; - - HDstrcpy(strategy, opt_arg); - if (!HDstrcmp(strategy, "FSM_AGGR")) - options->fs_strategy = H5F_FSPACE_STRATEGY_FSM_AGGR; - else if (!HDstrcmp(strategy, "PAGE")) - options->fs_strategy = H5F_FSPACE_STRATEGY_PAGE; - else if (!HDstrcmp(strategy, "AGGR")) - options->fs_strategy = H5F_FSPACE_STRATEGY_AGGR; - else if (!HDstrcmp(strategy, "NONE")) - options->fs_strategy = H5F_FSPACE_STRATEGY_NONE; - else { - error_msg("invalid file space management strategy\n", opt_arg); - h5tools_setstatus(EXIT_FAILURE); - ret_value = -1; - goto done; - } - if (options->fs_strategy == (H5F_fspace_strategy_t)0) - /* To distinguish the "specified" zero value */ - options->fs_strategy = (H5F_fspace_strategy_t)-1; + case 'S': { + char strategy[MAX_NC_NAME]; + + HDstrcpy(strategy, opt_arg); + if (!HDstrcmp(strategy, "FSM_AGGR")) + options->fs_strategy = H5F_FSPACE_STRATEGY_FSM_AGGR; + else if (!HDstrcmp(strategy, "PAGE")) + options->fs_strategy = H5F_FSPACE_STRATEGY_PAGE; + else if (!HDstrcmp(strategy, "AGGR")) + options->fs_strategy = H5F_FSPACE_STRATEGY_AGGR; + else if (!HDstrcmp(strategy, "NONE")) + options->fs_strategy = H5F_FSPACE_STRATEGY_NONE; + else { + error_msg("invalid file space management strategy\n", opt_arg); + h5tools_setstatus(EXIT_FAILURE); + ret_value = -1; + goto done; } - break; + if (options->fs_strategy == (H5F_fspace_strategy_t)0) + /* To distinguish the "specified" zero value */ + options->fs_strategy = (H5F_fspace_strategy_t)-1; + } break; case 'P': options->fs_persist = HDatoi(opt_arg); @@ -670,7 +712,7 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) options->fs_pagesize = HDstrtoll(opt_arg, NULL, 0); if (options->fs_pagesize == 0) /* To distinguish the "specified" zero value */ - options->fs_pagesize = -1; + options->fs_pagesize = -1; break; case 'q': @@ -696,15 +738,15 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case '1': - in_vol_info.type = VOL_BY_VALUE; + in_vol_info.type = VOL_BY_VALUE; in_vol_info.u.value = (H5VL_class_value_t)HDatoi(opt_arg); - custom_in_fapl = TRUE; + custom_in_fapl = TRUE; break; case '2': - in_vol_info.type = VOL_BY_NAME; + in_vol_info.type = VOL_BY_NAME; in_vol_info.u.name = opt_arg; - custom_in_fapl = TRUE; + custom_in_fapl = TRUE; break; case '3': @@ -712,15 +754,15 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) break; case '4': - out_vol_info.type = VOL_BY_VALUE; + out_vol_info.type = VOL_BY_VALUE; out_vol_info.u.value = (H5VL_class_value_t)HDatoi(opt_arg); - custom_out_fapl = TRUE; + custom_out_fapl = TRUE; break; case '5': - out_vol_info.type = VOL_BY_NAME; + out_vol_info.type = VOL_BY_NAME; out_vol_info.u.name = opt_arg; - custom_out_fapl = TRUE; + custom_out_fapl = TRUE; break; case '6': @@ -730,12 +772,12 @@ int parse_command_line(int argc, const char **argv, pack_opt_t* options) default: break; } /* end switch */ - } /* end while there are more options to parse */ + } /* end while there are more options to parse */ /* If neither -i nor -o given, get in and out files positionally */ if (0 == (has_i + has_o)) { if (argv[opt_ind] != NULL && argv[opt_ind + 1] != NULL) { - infile = argv[opt_ind]; + infile = argv[opt_ind]; outfile = argv[opt_ind + 1]; if (!HDstrcmp(infile, outfile)) { @@ -814,10 +856,11 @@ done: * Failure: EXIT_FAILURE(1) *------------------------------------------------------------------------- */ -int main(int argc, const char **argv) +int +main(int argc, const char **argv) { - pack_opt_t options; /*the global options */ - int parse_ret; + pack_opt_t options; /*the global options */ + int parse_ret; HDmemset(&options, 0, sizeof(pack_opt_t)); @@ -879,4 +922,3 @@ done: leave(h5tools_getstatus()); } - |