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-rw-r--r--tools/src/misc/h5debug.c496
-rw-r--r--tools/src/misc/h5mkgrp.c6
-rw-r--r--tools/src/misc/h5repart.c601
3 files changed, 571 insertions, 532 deletions
diff --git a/tools/src/misc/h5debug.c b/tools/src/misc/h5debug.c
index 088e6e9..96d6b9f 100644
--- a/tools/src/misc/h5debug.c
+++ b/tools/src/misc/h5debug.c
@@ -21,19 +21,19 @@
*
*-------------------------------------------------------------------------
*/
-#define H5A_FRIEND /*suppress error about including H5Apkg */
-#define H5B2_FRIEND /*suppress error about including H5B2pkg */
-#define H5B2_TESTING /*suppress warning about H5B2 testing funcs*/
-#define H5D_FRIEND /*suppress error about including H5Dpkg */
-#define H5EA_FRIEND /*suppress error about including H5EApkg */
-#define H5EA_TESTING /*suppress warning about H5EA testing funcs*/
-#define H5FA_FRIEND /*suppress error about including H5FApkg */
-#define H5FA_TESTING /*suppress warning about H5FA testing funcs*/
-#define H5F_FRIEND /*suppress error about including H5Fpkg */
-#define H5G_FRIEND /*suppress error about including H5Gpkg */
-#define H5HF_FRIEND /*suppress error about including H5HFpkg */
-#define H5O_FRIEND /*suppress error about including H5Opkg */
-#define H5SM_FRIEND /*suppress error about including H5SMpkg */
+#define H5A_FRIEND /*suppress error about including H5Apkg */
+#define H5B2_FRIEND /*suppress error about including H5B2pkg */
+#define H5B2_TESTING /*suppress warning about H5B2 testing funcs*/
+#define H5D_FRIEND /*suppress error about including H5Dpkg */
+#define H5EA_FRIEND /*suppress error about including H5EApkg */
+#define H5EA_TESTING /*suppress warning about H5EA testing funcs*/
+#define H5FA_FRIEND /*suppress error about including H5FApkg */
+#define H5FA_TESTING /*suppress warning about H5FA testing funcs*/
+#define H5F_FRIEND /*suppress error about including H5Fpkg */
+#define H5G_FRIEND /*suppress error about including H5Gpkg */
+#define H5HF_FRIEND /*suppress error about including H5HFpkg */
+#define H5O_FRIEND /*suppress error about including H5Opkg */
+#define H5SM_FRIEND /*suppress error about including H5SMpkg */
#include "H5private.h" /* Generic Functions */
#include "H5Apkg.h" /* Attributes */
@@ -57,7 +57,7 @@
#define VCOL 50
-
+
/*-------------------------------------------------------------------------
* Function: get_H5B2_class
*
@@ -80,68 +80,68 @@ get_H5B2_class(const uint8_t *sig)
const H5B2_class_t *cls;
switch(subtype) {
- case H5B2_TEST_ID:
- cls = H5B2_TEST;
- break;
+ case H5B2_TEST_ID:
+ cls = H5B2_TEST;
+ break;
- case H5B2_FHEAP_HUGE_INDIR_ID:
- cls = H5HF_HUGE_BT2_INDIR;
- break;
+ case H5B2_FHEAP_HUGE_INDIR_ID:
+ cls = H5HF_HUGE_BT2_INDIR;
+ break;
- case H5B2_FHEAP_HUGE_FILT_INDIR_ID:
- cls = H5HF_HUGE_BT2_FILT_INDIR;
- break;
+ case H5B2_FHEAP_HUGE_FILT_INDIR_ID:
+ cls = H5HF_HUGE_BT2_FILT_INDIR;
+ break;
- case H5B2_FHEAP_HUGE_DIR_ID:
- cls = H5HF_HUGE_BT2_DIR;
- break;
+ case H5B2_FHEAP_HUGE_DIR_ID:
+ cls = H5HF_HUGE_BT2_DIR;
+ break;
- case H5B2_FHEAP_HUGE_FILT_DIR_ID:
- cls = H5HF_HUGE_BT2_FILT_DIR;
- break;
+ case H5B2_FHEAP_HUGE_FILT_DIR_ID:
+ cls = H5HF_HUGE_BT2_FILT_DIR;
+ break;
- case H5B2_GRP_DENSE_NAME_ID:
- cls = H5G_BT2_NAME;
- break;
+ case H5B2_GRP_DENSE_NAME_ID:
+ cls = H5G_BT2_NAME;
+ break;
- case H5B2_GRP_DENSE_CORDER_ID:
- cls = H5G_BT2_CORDER;
- break;
+ case H5B2_GRP_DENSE_CORDER_ID:
+ cls = H5G_BT2_CORDER;
+ break;
- case H5B2_SOHM_INDEX_ID:
- cls = H5SM_INDEX;
- break;
+ case H5B2_SOHM_INDEX_ID:
+ cls = H5SM_INDEX;
+ break;
- case H5B2_ATTR_DENSE_NAME_ID:
- cls = H5A_BT2_NAME;
- break;
+ case H5B2_ATTR_DENSE_NAME_ID:
+ cls = H5A_BT2_NAME;
+ break;
- case H5B2_ATTR_DENSE_CORDER_ID:
- cls = H5A_BT2_CORDER;
- break;
+ case H5B2_ATTR_DENSE_CORDER_ID:
+ cls = H5A_BT2_CORDER;
+ break;
- case H5B2_CDSET_ID:
- cls = H5D_BT2;
- break;
+ case H5B2_CDSET_ID:
+ cls = H5D_BT2;
+ break;
- case H5B2_CDSET_FILT_ID:
- cls = H5D_BT2_FILT;
- break;
+ case H5B2_CDSET_FILT_ID:
+ cls = H5D_BT2_FILT;
+ break;
- case H5B2_TEST2_ID:
- cls = H5B2_TEST2;
- break;
+ case H5B2_TEST2_ID:
+ cls = H5B2_TEST2;
+ break;
- case H5B2_NUM_BTREE_ID:
- default:
- HDfprintf(stderr, "Unknown v2 B-tree subtype %u\n", (unsigned)(subtype));
- HDexit(4);
+ case H5B2_NUM_BTREE_ID:
+ default:
+ HDfprintf(stderr, "Unknown v2 B-tree subtype %u\n", (unsigned)(subtype));
+ HDexit(4);
} /* end switch */
return(cls);
} /* end get_H5B2_class() */
-
+
/*-------------------------------------------------------------------------
* Function: get_H5EA_class
*
@@ -164,28 +164,28 @@ get_H5EA_class(const uint8_t *sig)
const H5EA_class_t *cls;
switch(clsid) {
- case H5EA_CLS_TEST_ID:
- cls = H5EA_CLS_TEST;
- break;
+ case H5EA_CLS_TEST_ID:
+ cls = H5EA_CLS_TEST;
+ break;
- case H5EA_CLS_CHUNK_ID:
- cls = H5EA_CLS_CHUNK;
- break;
+ case H5EA_CLS_CHUNK_ID:
+ cls = H5EA_CLS_CHUNK;
+ break;
- case H5EA_CLS_FILT_CHUNK_ID:
- cls = H5EA_CLS_FILT_CHUNK;
- break;
+ case H5EA_CLS_FILT_CHUNK_ID:
+ cls = H5EA_CLS_FILT_CHUNK;
+ break;
- case H5EA_NUM_CLS_ID:
- default:
- HDfprintf(stderr, "Unknown extensible array class %u\n", (unsigned)(clsid));
- HDexit(4);
+ case H5EA_NUM_CLS_ID:
+ default:
+ HDfprintf(stderr, "Unknown extensible array class %u\n", (unsigned)(clsid));
+ HDexit(4);
} /* end switch */
return(cls);
} /* end get_H5EA_class() */
-
+
/*-------------------------------------------------------------------------
* Function: get_H5FA_class
*
@@ -208,28 +208,28 @@ get_H5FA_class(const uint8_t *sig)
const H5FA_class_t *cls;
switch(clsid) {
- case H5FA_CLS_TEST_ID:
- cls = H5FA_CLS_TEST;
- break;
+ case H5FA_CLS_TEST_ID:
+ cls = H5FA_CLS_TEST;
+ break;
- case H5FA_CLS_CHUNK_ID:
- cls = H5FA_CLS_CHUNK;
- break;
+ case H5FA_CLS_CHUNK_ID:
+ cls = H5FA_CLS_CHUNK;
+ break;
- case H5FA_CLS_FILT_CHUNK_ID:
- cls = H5FA_CLS_FILT_CHUNK;
- break;
+ case H5FA_CLS_FILT_CHUNK_ID:
+ cls = H5FA_CLS_FILT_CHUNK;
+ break;
- case H5FA_NUM_CLS_ID:
- default:
- HDfprintf(stderr, "Unknown fixed array class %u\n", (unsigned)(clsid));
- HDexit(4);
+ case H5FA_NUM_CLS_ID:
+ default:
+ HDfprintf(stderr, "Unknown fixed array class %u\n", (unsigned)(clsid));
+ HDexit(4);
} /* end switch */
return(cls);
} /* end get_H5FA_class() */
-
+
/*-------------------------------------------------------------------------
* Function: main
*
@@ -254,13 +254,13 @@ main(int argc, char *argv[])
uint8_t sig[H5F_SIGNATURE_LEN];
size_t u;
H5E_auto2_t func;
- void *edata;
+ void *edata;
hbool_t api_ctx_pushed = FALSE; /* Whether API context pushed */
herr_t status = SUCCEED;
if(argc == 1) {
- HDfprintf(stderr, "Usage: %s filename [signature-addr [extra]]\n", argv[0]);
- HDexit(1);
+ HDfprintf(stderr, "Usage: %s filename [signature-addr [extra]]\n", argv[0]);
+ HDexit(1);
} /* end if */
/* Initialize the library */
@@ -274,15 +274,15 @@ main(int argc, char *argv[])
H5Eset_auto2(H5E_DEFAULT, NULL, NULL);
/*
- * Open the file and get the file descriptor.
- */
+ * Open the file and get the file descriptor.
+ */
if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) {
HDfprintf(stderr, "cannot create file access property list\n");
HDexit(1);
} /* end if */
if(HDstrchr(argv[1], '%'))
if(H5Pset_fapl_family (fapl, (hsize_t)0, H5P_DEFAULT) < 0) {
- fprintf(stderr, "cannot set file access property list\n");
+ HDfprintf(stderr, "cannot set file access property list\n");
HDexit(1);
}
if((fid = H5Fopen(argv[1], H5F_ACC_RDONLY, fapl)) < 0) {
@@ -309,8 +309,8 @@ main(int argc, char *argv[])
}
/*
- * Parse command arguments.
- */
+ * Parse command arguments.
+ */
if(argc > 2)
addr = (haddr_t)HDstrtoll(argv[2], NULL, 0);
if(argc > 3)
@@ -323,8 +323,8 @@ main(int argc, char *argv[])
extra4 = (haddr_t)HDstrtoll(argv[6], NULL, 0);
/*
- * Read the signature at the specified file position.
- */
+ * Read the signature at the specified file position.
+ */
HDfprintf(stdout, "Reading signature at address %a (rel)\n", addr);
if(H5F_block_read(f, H5FD_MEM_SUPER, addr, sizeof(sig), sig) < 0) {
HDfprintf(stderr, "cannot read signature\n");
@@ -332,26 +332,28 @@ main(int argc, char *argv[])
}
if(!HDmemcmp(sig, H5F_SIGNATURE, (size_t)H5F_SIGNATURE_LEN)) {
/*
- * Debug the file's super block.
- */
+ * Debug the file's super block.
+ */
status = H5F_debug(f, stdout, 0, VCOL);
} else if(!HDmemcmp(sig, H5HL_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a local heap.
- */
+ * Debug a local heap.
+ */
status = H5HL_debug(f, addr, stdout, 0, VCOL);
- } else if(!HDmemcmp (sig, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
- /*
- * Debug a global heap collection.
- */
- status = H5HG_debug(f, addr, stdout, 0, VCOL);
+ }
+ else if(!HDmemcmp (sig, H5HG_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ /*
+ * Debug a global heap collection.
+ */
+ status = H5HG_debug(f, addr, stdout, 0, VCOL);
- } else if(!HDmemcmp(sig, H5G_NODE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5G_NODE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a symbol table node.
- */
+ * Debug a symbol table node.
+ */
/* Check for extra parameters */
if(extra == 0) {
@@ -362,107 +364,109 @@ main(int argc, char *argv[])
status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
- } else if(!HDmemcmp(sig, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5B_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a B-tree. B-trees are debugged through the B-tree
- * subclass. The subclass identifier is the byte immediately
- * after the B-tree signature.
- */
+ * Debug a B-tree. B-trees are debugged through the B-tree
+ * subclass. The subclass identifier is the byte immediately
+ * after the B-tree signature.
+ */
H5B_subid_t subtype = (H5B_subid_t)sig[H5_SIZEOF_MAGIC];
unsigned ndims;
uint32_t dim[H5O_LAYOUT_NDIMS];
switch(subtype) {
- case H5B_SNODE_ID:
- /* Check for extra parameters */
- if(extra == 0) {
- HDfprintf(stderr, "\nWarning: Providing the group's local heap address will give more information\n");
- HDfprintf(stderr, "B-tree symbol table node usage:\n");
- HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <address of local heap>\n\n");
- HDexit(4);
- } /* end if */
+ case H5B_SNODE_ID:
+ /* Check for extra parameters */
+ if(extra == 0) {
+ HDfprintf(stderr, "\nWarning: Providing the group's local heap address will give more information\n");
+ HDfprintf(stderr, "B-tree symbol table node usage:\n");
+ HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <address of local heap>\n\n");
+ HDexit(4);
+ } /* end if */
- status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
- break;
+ status = H5G_node_debug(f, addr, stdout, 0, VCOL, extra);
+ break;
- case H5B_CHUNK_ID:
- /* Check for extra parameters */
- if(extra == 0) {
- HDfprintf(stderr, "ERROR: Need number of dimensions of chunk in order to dump chunk B-tree node\n");
+ case H5B_CHUNK_ID:
+ /* Check for extra parameters */
+ if(extra == 0) {
+ HDfprintf(stderr, "ERROR: Need number of dimensions of chunk in order to dump chunk B-tree node\n");
+ HDfprintf(stderr, "B-tree chunked storage node usage:\n");
+ HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
+ HDexit(4);
+ } /* end if */
+
+ /* Build array of chunk dimensions */
+ ndims = (unsigned)extra;
+ dim[0] = (uint32_t)extra2;
+ if(ndims > 1)
+ dim[1] = (uint32_t)extra3;
+ if(ndims > 2)
+ dim[2] = (uint32_t)extra4;
+
+ /* Check for dimension error */
+ if(ndims > 3) {
+ HDfprintf(stderr, "ERROR: Only 3 dimensions support currently (fix h5debug)\n");
+ HDfprintf(stderr, "B-tree chunked storage node usage:\n");
+ HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
+ HDexit(4);
+ } /* end for */
+ for(u = 0; u < ndims; u++)
+ if(0 == dim[u]) {
+ HDfprintf(stderr, "ERROR: Chunk dimensions should be >0\n");
HDfprintf(stderr, "B-tree chunked storage node usage:\n");
HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
HDexit(4);
} /* end if */
- /* Build array of chunk dimensions */
- ndims = (unsigned)extra;
- dim[0] = (uint32_t)extra2;
- if(ndims > 1)
- dim[1] = (uint32_t)extra3;
- if(ndims > 2)
- dim[2] = (uint32_t)extra4;
-
- /* Check for dimension error */
- if(ndims > 3) {
- HDfprintf(stderr, "ERROR: Only 3 dimensions support currently (fix h5debug)\n");
- HDfprintf(stderr, "B-tree chunked storage node usage:\n");
- HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
- HDexit(4);
- } /* end for */
- for(u = 0; u < ndims; u++)
- if(0 == dim[u]) {
- HDfprintf(stderr, "ERROR: Chunk dimensions should be >0\n");
- HDfprintf(stderr, "B-tree chunked storage node usage:\n");
- HDfprintf(stderr, "\th5debug <filename> <B-tree node address> <# of dimensions> <slowest chunk dim>...<fastest chunk dim>\n");
- HDexit(4);
- } /* end if */
-
- /* Set the last dimension (the element size) to zero */
- dim[ndims] = 0;
-
- status = H5D_btree_debug(f, addr, stdout, 0, VCOL, ndims, dim);
- break;
-
- case H5B_NUM_BTREE_ID:
- default:
- HDfprintf(stderr, "Unknown v1 B-tree subtype %u\n", (unsigned)(subtype));
- HDexit(4);
+ /* Set the last dimension (the element size) to zero */
+ dim[ndims] = 0;
+
+ status = H5D_btree_debug(f, addr, stdout, 0, VCOL, ndims, dim);
+ break;
+
+ case H5B_NUM_BTREE_ID:
+ default:
+ HDfprintf(stderr, "Unknown v1 B-tree subtype %u\n", (unsigned)(subtype));
+ HDexit(4);
}
- } else if(!HDmemcmp(sig, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5B2_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a v2 B-tree header.
- */
+ * Debug a v2 B-tree header.
+ */
const H5B2_class_t *cls = get_H5B2_class(sig);
HDassert(cls);
- if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && extra == 0) {
+ if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && extra == 0) {
HDfprintf(stderr, "ERROR: Need v2 B-tree header address and object header address containing the layout message in order to dump header\n");
HDfprintf(stderr, "v2 B-tree hdr usage:\n");
HDfprintf(stderr, "\th5debug <filename> <v2 B-tree header address> <object header address>\n");
HDexit(4);
- } /* end if */
+ } /* end if */
status = H5B2__hdr_debug(f, addr, stdout, 0, VCOL, cls, (haddr_t)extra);
- } else if(!HDmemcmp(sig, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5B2_INT_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a v2 B-tree internal node.
- */
+ * Debug a v2 B-tree internal node.
+ */
const H5B2_class_t *cls = get_H5B2_class(sig);
HDassert(cls);
/* Check for enough valid parameters */
- if((cls == H5D_BT2 || cls == H5D_BT2_FILT) &&
- (extra == 0 || extra2 == 0 || extra3 == 0 || extra4 == 0)) {
-
- fprintf(stderr, "ERROR: Need v2 B-tree header address, the node's number of records, depth, and object header address containing the layout message in order to dump internal node\n");
- fprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
- fprintf(stderr, "v2 B-tree internal node usage:\n");
- fprintf(stderr, "\th5debug <filename> <internal node address> <v2 B-tree header address> <number of records> <depth> <object header address>\n");
+ if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && (extra == 0 || extra2 == 0 || extra3 == 0 || extra4 == 0)) {
+ HDfprintf(stderr, "ERROR: Need v2 B-tree header address, the node's number of records, depth, and object header address containing the layout message in order to dump internal node\n");
+ HDfprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
+ HDfprintf(stderr, "v2 B-tree internal node usage:\n");
+ HDfprintf(stderr, "\th5debug <filename> <internal node address> <v2 B-tree header address> <number of records> <depth> <object header address>\n");
HDexit(4);
- } else if(extra == 0 || extra2 == 0 || extra3 == 0) {
+ }
+ else if(extra == 0 || extra2 == 0 || extra3 == 0) {
HDfprintf(stderr, "ERROR: Need v2 B-tree header address and the node's number of records and depth in order to dump internal node\n");
HDfprintf(stderr, "NOTE: Leaf nodes are depth 0, the internal nodes above them are depth 1, etc.\n");
HDfprintf(stderr, "v2 B-tree internal node usage:\n");
@@ -472,23 +476,24 @@ main(int argc, char *argv[])
status = H5B2__int_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, (unsigned)extra3, (haddr_t)extra4);
- } else if(!HDmemcmp(sig, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5B2_LEAF_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a v2 B-tree leaf node.
- */
+ * Debug a v2 B-tree leaf node.
+ */
const H5B2_class_t *cls = get_H5B2_class(sig);
HDassert(cls);
/* Check for enough valid parameters */
- if((cls == H5D_BT2 || cls == H5D_BT2_FILT) &&
- (extra == 0 || extra2 == 0 || extra3 == 0 )) {
+ if((cls == H5D_BT2 || cls == H5D_BT2_FILT) && (extra == 0 || extra2 == 0 || extra3 == 0 )) {
- fprintf(stderr, "ERROR: Need v2 B-tree header address, number of records, and object header address containing the layout message in order to dump leaf node\n");
- fprintf(stderr, "v2 B-tree leaf node usage:\n");
- fprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records> <object header address>\n");
+ HDfprintf(stderr, "ERROR: Need v2 B-tree header address, number of records, and object header address containing the layout message in order to dump leaf node\n");
+ HDfprintf(stderr, "v2 B-tree leaf node usage:\n");
+ HDfprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records> <object header address>\n");
HDexit(4);
- } else if(extra == 0 || extra2 == 0) {
+ }
+ else if(extra == 0 || extra2 == 0) {
HDfprintf(stderr, "ERROR: Need v2 B-tree header address and number of records in order to dump leaf node\n");
HDfprintf(stderr, "v2 B-tree leaf node usage:\n");
HDfprintf(stderr, "\th5debug <filename> <leaf node address> <v2 B-tree header address> <number of records>\n");
@@ -497,16 +502,18 @@ main(int argc, char *argv[])
status = H5B2__leaf_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, (haddr_t)extra3);
- } else if(!HDmemcmp(sig, H5HF_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5HF_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a fractal heap header.
- */
+ * Debug a fractal heap header.
+ */
status = H5HF_hdr_debug(f, addr, stdout, 0, VCOL);
- } else if(!HDmemcmp(sig, H5HF_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5HF_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a fractal heap direct block.
- */
+ * Debug a fractal heap direct block.
+ */
/* Check for enough valid parameters */
if(extra == 0 || extra2 == 0) {
@@ -518,10 +525,11 @@ main(int argc, char *argv[])
status = H5HF_dblock_debug(f, addr, stdout, 0, VCOL, extra, (size_t)extra2);
- } else if(!HDmemcmp(sig, H5HF_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5HF_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a fractal heap indirect block.
- */
+ * Debug a fractal heap indirect block.
+ */
/* Check for enough valid parameters */
if(extra == 0 || extra2 == 0) {
@@ -533,17 +541,19 @@ main(int argc, char *argv[])
status = H5HF_iblock_debug(f, addr, stdout, 0, VCOL, extra, (unsigned)extra2);
- } else if(!HDmemcmp(sig, H5FS_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5FS_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a free space header.
- */
+ * Debug a free space header.
+ */
status = H5FS_debug(f, addr, stdout, 0, VCOL);
- } else if(!HDmemcmp(sig, H5FS_SINFO_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5FS_SINFO_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug free space serialized sections.
- */
+ * Debug free space serialized sections.
+ */
/* Check for enough valid parameters */
if(extra == 0 || extra2 == 0) {
@@ -555,17 +565,19 @@ main(int argc, char *argv[])
status = H5FS_sects_debug(f, addr, stdout, 0, VCOL, extra, extra2);
- } else if(!HDmemcmp(sig, H5SM_TABLE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5SM_TABLE_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug shared message master table.
- */
+ * Debug shared message master table.
+ */
status = H5SM_table_debug(f, addr, stdout, 0, VCOL, (unsigned) UFAIL, (unsigned) UFAIL);
- } else if(!HDmemcmp(sig, H5SM_LIST_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5SM_LIST_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug shared message list index.
- */
+ * Debug shared message list index.
+ */
/* Check for enough valid parameters */
if(extra == 0) {
@@ -577,10 +589,11 @@ main(int argc, char *argv[])
status = H5SM_list_debug(f, addr, stdout, 0, VCOL, (haddr_t)extra);
- } else if(!HDmemcmp(sig, H5EA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5EA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug an extensible aray header.
- */
+ * Debug an extensible aray header.
+ */
const H5EA_class_t *cls = get_H5EA_class(sig);
HDassert(cls);
@@ -594,10 +607,11 @@ main(int argc, char *argv[])
status = H5EA__hdr_debug(f, addr, stdout, 0, VCOL, cls, extra);
- } else if(!HDmemcmp(sig, H5EA_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5EA_IBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug an extensible aray index block.
- */
+ * Debug an extensible aray index block.
+ */
const H5EA_class_t *cls = get_H5EA_class(sig);
HDassert(cls);
@@ -611,10 +625,11 @@ main(int argc, char *argv[])
status = H5EA__iblock_debug(f, addr, stdout, 0, VCOL, cls, extra, extra2);
- } else if(!HDmemcmp(sig, H5EA_SBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5EA_SBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug an extensible aray super block.
- */
+ * Debug an extensible aray super block.
+ */
const H5EA_class_t *cls = get_H5EA_class(sig);
HDassert(cls);
@@ -628,10 +643,11 @@ main(int argc, char *argv[])
status = H5EA__sblock_debug(f, addr, stdout, 0, VCOL, cls, extra, (unsigned)extra2, extra3);
- } else if(!HDmemcmp(sig, H5EA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5EA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug an extensible aray data block.
- */
+ * Debug an extensible aray data block.
+ */
const H5EA_class_t *cls = get_H5EA_class(sig);
HDassert(cls);
@@ -645,10 +661,11 @@ main(int argc, char *argv[])
status = H5EA__dblock_debug(f, addr, stdout, 0, VCOL, cls, extra, (size_t)extra2, extra3);
- } else if(!HDmemcmp(sig, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5FA_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a fixed array header.
- */
+ * Debug a fixed array header.
+ */
const H5FA_class_t *cls = get_H5FA_class(sig);
HDassert(cls);
@@ -662,10 +679,11 @@ main(int argc, char *argv[])
status = H5FA__hdr_debug(f, addr, stdout, 0, VCOL, cls, extra);
- } else if(!HDmemcmp(sig, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5FA_DBLOCK_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug a fixed array data block.
- */
+ * Debug a fixed array data block.
+ */
const H5FA_class_t *cls = get_H5FA_class(sig);
HDassert(cls);
@@ -679,33 +697,37 @@ main(int argc, char *argv[])
status = H5FA__dblock_debug(f, addr, stdout, 0, VCOL, cls, extra, extra2);
- } else if(!HDmemcmp(sig, H5O_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
+ }
+ else if(!HDmemcmp(sig, H5O_HDR_MAGIC, (size_t)H5_SIZEOF_MAGIC)) {
/*
- * Debug v2 object header (which have signatures).
- */
+ * Debug v2 object header (which have signatures).
+ */
status = H5O_debug(f, addr, stdout, 0, VCOL);
- } else if(sig[0] == H5O_VERSION_1) {
+ }
+ else if(sig[0] == H5O_VERSION_1) {
/*
- * This could be a v1 object header. Since they don't have a signature
- * it's a somewhat "ify" detection.
- */
+ * This could be a v1 object header. Since they don't have a signature
+ * it's a somewhat "ify" detection.
+ */
status = H5O_debug(f, addr, stdout, 0, VCOL);
- } else {
+ }
+ else {
/*
- * Got some other unrecognized signature.
- */
- printf("%-*s ", VCOL, "Signature:");
+ * Got some other unrecognized signature.
+ */
+ HDprintf("%-*s ", VCOL, "Signature:");
for (u = 0; u < sizeof(sig); u++) {
if (sig[u] > ' ' && sig[u] <= '~' && '\\' != sig[u])
HDputchar(sig[u]);
else if ('\\' == sig[u]) {
HDputchar('\\');
HDputchar('\\');
- } else
- printf("\\%03o", sig[u]);
+ }
+ else
+ HDprintf("\\%03o", sig[u]);
}
HDputchar('\n');
diff --git a/tools/src/misc/h5mkgrp.c b/tools/src/misc/h5mkgrp.c
index b7ff73c..feb60d4 100644
--- a/tools/src/misc/h5mkgrp.c
+++ b/tools/src/misc/h5mkgrp.c
@@ -251,7 +251,7 @@ main(int argc, const char *argv[])
/* Display some output if requested */
if(params.verbose)
- printf("%s: Creating groups with latest version of the format\n", h5tools_getprogname());
+ HDprintf("%s: Creating groups with latest version of the format\n", h5tools_getprogname());
} /* end if */
/* Attempt to open an existing HDF5 file first */
@@ -284,7 +284,7 @@ main(int argc, const char *argv[])
/* Display some output if requested */
if(params.verbose)
- printf("%s: Creating parent groups\n", h5tools_getprogname());
+ HDprintf("%s: Creating parent groups\n", h5tools_getprogname());
} /* end if */
/* Loop over creating requested groups */
@@ -305,7 +305,7 @@ main(int argc, const char *argv[])
/* Display some output if requested */
if(params.verbose)
- printf("%s: created group '%s'\n", h5tools_getprogname(), params.groups[curr_group]);
+ HDprintf("%s: created group '%s'\n", h5tools_getprogname(), params.groups[curr_group]);
} /* end for */
/* Close link creation property list */
diff --git a/tools/src/misc/h5repart.c b/tools/src/misc/h5repart.c
index 2f4d93e..d516fa0 100644
--- a/tools/src/misc/h5repart.c
+++ b/tools/src/misc/h5repart.c
@@ -15,19 +15,19 @@
* Programmer: Robb Matzke <matzke@llnl.gov>
* Wednesday, May 13, 1998
*
- * Purpose: Repartitions a file family. This program can be used to
- * split a single file into a family of files, join a family of
- * files into a single file, or copy one family to another while
- * changing the size of the family members. It can also be used
- * to copy a single file to a single file with holes.
+ * Purpose: Repartitions a file family. This program can be used to
+ * split a single file into a family of files, join a family of
+ * files into a single file, or copy one family to another while
+ * changing the size of the family members. It can also be used
+ * to copy a single file to a single file with holes.
*/
/* See H5private.h for how to include system headers */
#include "hdf5.h"
#include "H5private.h"
-#define NAMELEN 4096
-#define GB *1024*1024*1024
+#define NAMELEN 4096
+#define GB *1024*1024*1024
/* Make these 2 private properties(defined in H5Fprivate.h) available to h5repart.
* The first one updates the member file size in the superblock. The second one
@@ -36,15 +36,15 @@
#define H5F_ACS_FAMILY_NEWSIZE_NAME "family_newsize"
#define H5F_ACS_FAMILY_TO_SINGLE_NAME "family_to_single"
-
+
/*-------------------------------------------------------------------------
- * Function: usage
+ * Function: usage
*
- * Purpose: Prints a usage message.
+ * Purpose: Prints a usage message.
*
- * Return: void
+ * Return: void
*
- * Programmer: Robb Matzke
+ * Programmer: Robb Matzke
* Wednesday, May 13, 1998
*
* Modifications:
@@ -54,98 +54,99 @@
static void
usage (const char *progname)
{
- fprintf(stderr, "usage: %s [-v] [-V] [-[b|m] N[g|m|k]] [-family_to_sec2|-family_to_single] SRC DST\n",
- progname);
- fprintf(stderr, " -v Produce verbose output\n");
- fprintf(stderr, " -V Print a version number and exit\n");
- fprintf(stderr, " -b N The I/O block size, defaults to 1kB\n");
- fprintf(stderr, " -m N The destination member size or 1GB\n");
- fprintf(stderr, " -family_to_sec2 Deprecated version of -family_to_single (below)\n");
- fprintf(stderr, " -family_to_single Change file driver from family to the default single-file VFD (windows or sec2)\n");
- fprintf(stderr, " SRC The name of the source file\n");
- fprintf(stderr, " DST The name of the destination files\n");
- fprintf(stderr, "Sizes may be suffixed with `g' for GB, `m' for MB or "
- "`k' for kB.\n");
- fprintf(stderr, "File family names include an integer printf "
- "format such as `%%d'\n");
- exit (EXIT_FAILURE);
+ HDfprintf(stderr, "usage: %s [-v] [-V] [-[b|m] N[g|m|k]] [-family_to_sec2|-family_to_single] SRC DST\n",
+ progname);
+ HDfprintf(stderr, " -v Produce verbose output\n");
+ HDfprintf(stderr, " -V Print a version number and exit\n");
+ HDfprintf(stderr, " -b N The I/O block size, defaults to 1kB\n");
+ HDfprintf(stderr, " -m N The destination member size or 1GB\n");
+ HDfprintf(stderr, " -family_to_sec2 Deprecated version of -family_to_single (below)\n");
+ HDfprintf(stderr, " -family_to_single Change file driver from family to the default single-file VFD (windows or sec2)\n");
+ HDfprintf(stderr, " SRC The name of the source file\n");
+ HDfprintf(stderr, " DST The name of the destination files\n");
+ HDfprintf(stderr, "Sizes may be suffixed with `g' for GB, `m' for MB or "
+ "`k' for kB.\n");
+ HDfprintf(stderr, "File family names include an integer printf "
+ "format such as `%%d'\n");
+ HDexit (EXIT_FAILURE);
}
-
+
/*-------------------------------------------------------------------------
- * Function: get_size
+ * Function: get_size
*
- * Purpose: Reads a size option of the form `-XNS' where `X' is any
- * letter, `N' is a multi-character positive decimal number, and
- * `S' is an optional suffix letter in the set [GgMmk]. The
- * option may also be split among two arguments as: `-X NS'.
- * The input value of ARGNO is the argument number for the
- * switch in the ARGV vector and ARGC is the number of entries
- * in that vector.
+ * Purpose: Reads a size option of the form `-XNS' where `X' is any
+ * letter, `N' is a multi-character positive decimal number, and
+ * `S' is an optional suffix letter in the set [GgMmk]. The
+ * option may also be split among two arguments as: `-X NS'.
+ * The input value of ARGNO is the argument number for the
+ * switch in the ARGV vector and ARGC is the number of entries
+ * in that vector.
*
- * Return: Success: The value N multiplied according to the
- * suffix S. On return ARGNO will be the number
- * of the next argument to process.
+ * Return: Success: The value N multiplied according to the
+ * suffix S. On return ARGNO will be the number
+ * of the next argument to process.
*
- * Failure: Calls usage() which exits with a non-zero
- * status.
+ * Failure: Calls usage() which exits with a non-zero
+ * status.
*
- * Programmer: Robb Matzke
+ * Programmer: Robb Matzke
* Wednesday, May 13, 1998
- *
- * Modifications:
- *
*-------------------------------------------------------------------------
*/
static off_t
get_size (const char *progname, int *argno, int argc, char *argv[])
{
- off_t retval=-1;
- char *suffix;
+ off_t retval=-1;
+ char *suffix;
if (isdigit ((int)(argv[*argno][2]))) {
- retval = strtol (argv[*argno]+2, &suffix, 10);
- (*argno)++;
- } else if (argv[*argno][2] || *argno+1>=argc) {
- usage (progname);
- } else {
- retval = strtol (argv[*argno+1], &suffix, 0);
- if (suffix==argv[*argno+1]) usage (progname);
- *argno += 2;
+ retval = HDstrtol(argv[*argno]+2, &suffix, 10);
+ (*argno)++;
+ }
+ else if (argv[*argno][2] || *argno+1>=argc) {
+ usage (progname);
+ }
+ else {
+ retval = HDstrtol(argv[*argno+1], &suffix, 0);
+ if (suffix == argv[*argno+1])
+ usage (progname);
+ *argno += 2;
}
if (suffix && suffix[0] && !suffix[1]) {
- switch (*suffix) {
- case 'G':
- case 'g':
- retval *= 1024 * 1024 * 1024;
- break;
- case 'M':
- case 'm':
- retval *= 1024 * 1024;
- break;
- case 'k':
- retval *= 1024;
- break;
- default:
- usage (progname);
- }
- } else if (suffix && suffix[0]) {
- usage (progname);
+ switch (*suffix) {
+ case 'G':
+ case 'g':
+ retval *= 1024 * 1024 * 1024;
+ break;
+ case 'M':
+ case 'm':
+ retval *= 1024 * 1024;
+ break;
+ case 'k':
+ retval *= 1024;
+ break;
+ default:
+ usage(progname);
+ }
+ }
+ else if (suffix && suffix[0]) {
+ usage (progname);
}
return retval;
}
-
+
/*-------------------------------------------------------------------------
- * Function: main
+ * Function: main
*
- * Purpose: Split an hdf5 file
+ * Purpose: Split an hdf5 file
*
- * Return: Success:
+ * Return: Success:
*
- * Failure:
+ * Failure:
*
- * Programmer: Robb Matzke
+ * Programmer: Robb Matzke
* Wednesday, May 13, 1998
*
* Modifications:
@@ -155,36 +156,36 @@ get_size (const char *progname, int *argno, int argc, char *argv[])
int
main (int argc, char *argv[])
{
- const char *prog_name; /*program name */
- size_t blk_size=1024; /*size of each I/O block */
- char *buf=NULL; /*I/O block buffer */
- size_t n, i; /*counters */
- ssize_t nio; /*I/O return value */
- int argno=1; /*program argument number */
- int src, dst=-1; /*source & destination files */
- int need_seek=FALSE; /*destination needs to seek? */
- int need_write; /*data needs to be written? */
- h5_stat_t sb; /*temporary file stat buffer */
-
- int verbose=FALSE; /*display file names? */
-
- const char *src_gen_name; /*general source name */
- char *src_name=NULL; /*source member name */
-
- int src_is_family; /*is source name a family name? */
- int src_membno=0; /*source member number */
-
- const char *dst_gen_name; /*general destination name */
- char *dst_name=NULL; /*destination member name */
- int dst_is_family; /*is dst name a family name? */
- int dst_membno=0; /*destination member number */
-
- off_t left_overs=0; /*amount of zeros left over */
- off_t src_offset=0; /*offset in source member */
- off_t dst_offset=0; /*offset in destination member */
- off_t src_size; /*source logical member size */
- off_t src_act_size; /*source actual member size */
- off_t dst_size=1 GB; /*destination logical memb size */
+ const char *prog_name; /*program name */
+ size_t blk_size=1024; /*size of each I/O block */
+ char *buf=NULL; /*I/O block buffer */
+ size_t n, i; /*counters */
+ ssize_t nio; /*I/O return value */
+ int argno=1; /*program argument number */
+ int src, dst=-1; /*source & destination files */
+ int need_seek=FALSE; /*destination needs to seek? */
+ int need_write; /*data needs to be written? */
+ h5_stat_t sb; /*temporary file stat buffer */
+
+ int verbose=FALSE; /*display file names? */
+
+ const char *src_gen_name; /*general source name */
+ char *src_name=NULL; /*source member name */
+
+ int src_is_family; /*is source name a family name? */
+ int src_membno=0; /*source member number */
+
+ const char *dst_gen_name; /*general destination name */
+ char *dst_name=NULL; /*destination member name */
+ int dst_is_family; /*is dst name a family name? */
+ int dst_membno=0; /*destination member number */
+
+ off_t left_overs=0; /*amount of zeros left over */
+ off_t src_offset=0; /*offset in source member */
+ off_t dst_offset=0; /*offset in destination member */
+ off_t src_size; /*source logical member size */
+ off_t src_act_size; /*source actual member size */
+ off_t dst_size=1 GB; /*destination logical memb size */
hid_t fapl; /*file access property list */
hid_t file;
hsize_t hdsize; /*destination logical memb size */
@@ -193,48 +194,50 @@ main (int argc, char *argv[])
/*
* Get the program name from argv[0]. Use only the last component.
*/
- if ((prog_name=strrchr (argv[0], '/'))) prog_name++;
- else prog_name = argv[0];
+ if ((prog_name = HDstrrchr (argv[0], '/')))
+ prog_name++;
+ else
+ prog_name = argv[0];
/*
* Parse switches.
*/
- while (argno<argc && '-'==argv[argno][0]) {
- if (!strcmp (argv[argno], "-v")) {
+ while (argno < argc && '-' == argv[argno][0]) {
+ if (!HDstrcmp(argv[argno], "-v")) {
verbose = TRUE;
argno++;
- } else if (!strcmp(argv[argno], "-V")) {
- printf("This is %s version %u.%u release %u\n",
- prog_name, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE);
- exit(EXIT_SUCCESS);
- } else if (!strcmp (argv[argno], "-family_to_sec2")) {
+ } else if (!HDstrcmp(argv[argno], "-V")) {
+ HDprintf("This is %s version %u.%u release %u\n", prog_name, H5_VERS_MAJOR, H5_VERS_MINOR, H5_VERS_RELEASE);
+ HDexit(EXIT_SUCCESS);
+ } else if (!HDstrcmp(argv[argno], "-family_to_sec2")) {
family_to_single = TRUE;
argno++;
- } else if (!strcmp (argv[argno], "-family_to_single")) {
+ } else if (!HDstrcmp(argv[argno], "-family_to_single")) {
family_to_single = TRUE;
argno++;
- } else if ('b'==argv[argno][1]) {
- blk_size = (size_t)get_size (prog_name, &argno, argc, argv);
- } else if ('m'==argv[argno][1]) {
- dst_size = get_size (prog_name, &argno, argc, argv);
+ } else if ('b' == argv[argno][1]) {
+ blk_size = (size_t) get_size(prog_name, &argno, argc, argv);
+ } else if ('m' == argv[argno][1]) {
+ dst_size = get_size(prog_name, &argno, argc, argv);
} else {
- usage (prog_name);
+ usage(prog_name);
} /* end if */
} /* end while */
/* allocate names */
if(NULL == (src_name = (char *)HDcalloc((size_t)NAMELEN, sizeof(char))))
- exit(EXIT_FAILURE);
+ HDexit(EXIT_FAILURE);
if(NULL == (dst_name = (char *)HDcalloc((size_t)NAMELEN, sizeof(char))))
- exit(EXIT_FAILURE);
+ HDexit(EXIT_FAILURE);
/*
* Get the name for the source file and open the first member. The size
* of the first member determines the logical size of all the members.
*/
- if (argno>=argc) usage (prog_name);
+ if (argno >= argc)
+ usage(prog_name);
src_gen_name = argv[argno++];
- sprintf (src_name, src_gen_name, src_membno);
+ HDsprintf(src_name, src_gen_name, src_membno);
src_is_family = strcmp (src_name, src_gen_name);
if ((src = HDopen(src_name, O_RDONLY)) < 0) {
@@ -242,157 +245,170 @@ main (int argc, char *argv[])
HDexit(EXIT_FAILURE);
}
- if (HDfstat(src, &sb)<0) {
- perror ("fstat");
- exit (EXIT_FAILURE);
+ if (HDfstat(src, &sb) < 0) {
+ HDperror("fstat");
+ HDexit(EXIT_FAILURE);
}
src_size = src_act_size = sb.st_size;
- if (verbose) fprintf (stderr, "< %s\n", src_name);
+ if (verbose)
+ HDfprintf(stderr, "< %s\n", src_name);
/*
* Get the name for the destination file and open the first member.
*/
- if (argno>=argc) usage (prog_name);
+ if (argno>=argc)
+ usage (prog_name);
dst_gen_name = argv[argno++];
- sprintf (dst_name, dst_gen_name, dst_membno);
- dst_is_family = strcmp (dst_name, dst_gen_name);
+ HDsprintf(dst_name, dst_gen_name, dst_membno);
+ dst_is_family = HDstrcmp(dst_name, dst_gen_name);
if ((dst = HDopen(dst_name, O_RDWR|O_CREAT|O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
HDperror(dst_name);
HDexit(EXIT_FAILURE);
}
- if (verbose) fprintf (stderr, "> %s\n", dst_name);
+ if (verbose)
+ HDfprintf(stderr, "> %s\n", dst_name);
/* No more arguments */
- if (argno<argc) usage (prog_name);
+ if (argno < argc)
+ usage (prog_name);
/* Now the real work, split the file */
buf = (char *)HDmalloc(blk_size);
while (src_offset<src_size) {
- /* Read a block. The amount to read is the minimum of:
- * 1. The I/O block size
- * 2. What's left to write in the destination member
- * 3. Left over zeros or what's left in the source member.
- */
- n = blk_size;
- if (dst_is_family) n = (size_t)MIN((off_t)n, dst_size-dst_offset);
- if (left_overs) {
- n = (size_t)MIN ((off_t)n, left_overs);
- left_overs = left_overs - (off_t)n;
- need_write = FALSE;
- } else if (src_offset<src_act_size) {
- n = (size_t)MIN ((off_t)n, src_act_size-src_offset);
- if ((nio=HDread (src, buf, n))<0) {
- perror ("read");
- exit (EXIT_FAILURE);
- } else if ((size_t)nio!=n) {
- fprintf (stderr, "%s: short read\n", src_name);
- exit (EXIT_FAILURE);
- }
- for (i=0; i<n; i++) {
- if (buf[i]) break;
- }
- need_write = (i<n);
- } else {
- n = 0;
- left_overs = src_size - src_act_size;
- need_write = FALSE;
- }
-
- /*
- * If the block contains non-zero data then write it to the
- * destination, otherwise just remember that we'll have to do a seek
- * later in the destination when we finally get non-zero data.
- */
- if (need_write) {
- if (need_seek && HDlseek (dst, dst_offset, SEEK_SET)<0) {
- perror ("HDlseek");
- exit (EXIT_FAILURE);
- }
- if ((nio=HDwrite (dst, buf, n))<0) {
- perror ("write");
- exit (EXIT_FAILURE);
- } else if ((size_t)nio!=n) {
- fprintf (stderr, "%s: short write\n", dst_name);
- exit (EXIT_FAILURE);
- }
- need_seek = FALSE;
- } else {
- need_seek = TRUE;
- }
-
- /*
- * Update the source offset and open the next source family member if
- * necessary. The source stream ends at the first member which
- * cannot be opened because it doesn't exist. At the end of the
- * source stream, update the destination offset and break out of the
- * loop. The destination offset must be updated so we can fix
- * trailing holes.
- */
- src_offset = src_offset + (off_t)n;
- if (src_offset==src_act_size) {
- HDclose (src);
- if (!src_is_family) {
- dst_offset = dst_offset + (off_t)n;
- break;
- }
- sprintf (src_name, src_gen_name, ++src_membno);
- if ((src = HDopen(src_name, O_RDONLY)) < 0 && ENOENT == errno) {
- dst_offset = dst_offset + (off_t)n;
- break;
- } else if (src<0) {
- perror (src_name);
- exit (EXIT_FAILURE);
- }
- if (HDfstat (src, &sb)<0) {
- perror ("fstat");
- exit (EXIT_FAILURE);
- }
- src_act_size = sb.st_size;
- if (src_act_size>src_size) {
- fprintf (stderr, "%s: member truncated to %lu bytes\n",
- src_name, (unsigned long)src_size);
- }
- src_offset = 0;
- if (verbose) fprintf (stderr, "< %s\n", src_name);
- }
-
- /*
- * Update the destination offset, opening a new member if one will be
- * needed. The first member is extended to the logical member size
- * but other members might be smaller if they end with a hole.
- */
- dst_offset = dst_offset + (off_t)n;
- if (dst_is_family && dst_offset==dst_size) {
- if (0==dst_membno) {
- if (HDlseek (dst, dst_size-1, SEEK_SET)<0) {
- perror ("HDHDlseek");
- exit (EXIT_FAILURE);
- }
- if (HDread (dst, buf, 1)<0) {
- perror ("read");
- exit (EXIT_FAILURE);
- }
- if (HDlseek (dst, dst_size-1, SEEK_SET)<0) {
- perror ("HDlseek");
- exit (EXIT_FAILURE);
- }
- if (HDwrite (dst, buf, 1)<0) {
- perror ("write");
- exit (EXIT_FAILURE);
- }
- }
- HDclose (dst);
- sprintf (dst_name, dst_gen_name, ++dst_membno);
- if ((dst = HDopen(dst_name, O_RDWR|O_CREAT|O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
- HDperror(dst_name);
- HDexit(EXIT_FAILURE);
- }
- dst_offset = 0;
- need_seek = FALSE;
- if (verbose) fprintf (stderr, "> %s\n", dst_name);
- }
+ /* Read a block. The amount to read is the minimum of:
+ * 1. The I/O block size
+ * 2. What's left to write in the destination member
+ * 3. Left over zeros or what's left in the source member.
+ */
+ n = blk_size;
+ if (dst_is_family)
+ n = (size_t)MIN((off_t)n, dst_size-dst_offset);
+ if (left_overs) {
+ n = (size_t)MIN((off_t)n, left_overs);
+ left_overs = left_overs - (off_t) n;
+ need_write = FALSE;
+ }
+ else if (src_offset < src_act_size) {
+ n = (size_t)MIN((off_t)n, src_act_size-src_offset);
+ if ((nio = HDread(src, buf, n)) < 0) {
+ HDperror("read");
+ HDexit(EXIT_FAILURE);
+ }
+ else if ((size_t) nio != n) {
+ HDfprintf(stderr, "%s: short read\n", src_name);
+ HDexit(EXIT_FAILURE);
+ }
+ for (i = 0; i < n; i++) {
+ if (buf[i])
+ break;
+ }
+ need_write = (i < n);
+ }
+ else {
+ n = 0;
+ left_overs = src_size - src_act_size;
+ need_write = FALSE;
+ }
+
+ /*
+ * If the block contains non-zero data then write it to the
+ * destination, otherwise just remember that we'll have to do a seek
+ * later in the destination when we finally get non-zero data.
+ */
+ if (need_write) {
+ if (need_seek && HDlseek (dst, dst_offset, SEEK_SET) < 0) {
+ HDperror("HDlseek");
+ HDexit(EXIT_FAILURE);
+ }
+ if ((nio = HDwrite(dst, buf, n)) < 0) {
+ HDperror("write");
+ HDexit(EXIT_FAILURE);
+ }
+ else if ((size_t) nio != n) {
+ HDfprintf(stderr, "%s: short write\n", dst_name);
+ HDexit(EXIT_FAILURE);
+ }
+ need_seek = FALSE;
+ }
+ else {
+ need_seek = TRUE;
+ }
+
+ /*
+ * Update the source offset and open the next source family member if
+ * necessary. The source stream ends at the first member which
+ * cannot be opened because it doesn't exist. At the end of the
+ * source stream, update the destination offset and break out of the
+ * loop. The destination offset must be updated so we can fix
+ * trailing holes.
+ */
+ src_offset = src_offset + (off_t) n;
+ if (src_offset == src_act_size) {
+ HDclose(src);
+ if (!src_is_family) {
+ dst_offset = dst_offset + (off_t) n;
+ break;
+ }
+ HDsprintf(src_name, src_gen_name, ++src_membno);
+ if ((src = HDopen(src_name, O_RDONLY)) < 0 && ENOENT == errno) {
+ dst_offset = dst_offset + (off_t) n;
+ break;
+ }
+ else if (src < 0) {
+ HDperror(src_name);
+ HDexit(EXIT_FAILURE);
+ }
+ if (HDfstat (src, &sb) < 0) {
+ HDperror("fstat");
+ HDexit(EXIT_FAILURE);
+ }
+ src_act_size = sb.st_size;
+ if (src_act_size > src_size) {
+ HDfprintf(stderr, "%s: member truncated to %lu bytes\n", src_name, (unsigned long) src_size);
+ }
+ src_offset = 0;
+ if (verbose)
+ HDfprintf(stderr, "< %s\n", src_name);
+ }
+
+ /*
+ * Update the destination offset, opening a new member if one will be
+ * needed. The first member is extended to the logical member size
+ * but other members might be smaller if they end with a hole.
+ */
+ dst_offset = dst_offset + (off_t) n;
+ if (dst_is_family && dst_offset == dst_size) {
+ if (0 == dst_membno) {
+ if (HDlseek (dst, dst_size-1, SEEK_SET) < 0) {
+ HDperror("HDHDlseek");
+ HDexit(EXIT_FAILURE);
+ }
+ if (HDread (dst, buf, 1) < 0) {
+ HDperror("read");
+ HDexit(EXIT_FAILURE);
+ }
+ if (HDlseek (dst, dst_size-1, SEEK_SET) < 0) {
+ HDperror("HDlseek");
+ HDexit(EXIT_FAILURE);
+ }
+ if (HDwrite (dst, buf, 1) < 0) {
+ HDperror("write");
+ HDexit(EXIT_FAILURE);
+ }
+ }
+ HDclose(dst);
+ HDsprintf(dst_name, dst_gen_name, ++dst_membno);
+ if ((dst = HDopen(dst_name, O_RDWR | O_CREAT | O_TRUNC, H5_POSIX_CREATE_MODE_RW)) < 0) {
+ HDperror(dst_name);
+ HDexit(EXIT_FAILURE);
+ }
+ dst_offset = 0;
+ need_seek = FALSE;
+ if (verbose)
+ HDfprintf(stderr, "> %s\n", dst_name);
+ }
}
/*
@@ -401,30 +417,30 @@ main (int argc, char *argv[])
* family has been truncated.
*/
if (need_seek) {
- if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
- perror ("HDlseek");
- exit (EXIT_FAILURE);
- }
- if (HDread (dst, buf, 1)<0) {
- perror ("read");
- exit (EXIT_FAILURE);
- }
- if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
- perror ("HDlseek");
- exit (EXIT_FAILURE);
- }
- if (HDwrite (dst, buf, 1)<0) {
- perror ("write");
- exit (EXIT_FAILURE);
- }
+ if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
+ HDperror ("HDlseek");
+ HDexit (EXIT_FAILURE);
+ }
+ if (HDread (dst, buf, 1)<0) {
+ HDperror ("read");
+ HDexit (EXIT_FAILURE);
+ }
+ if (HDlseek (dst, dst_offset-1, SEEK_SET)<0) {
+ HDperror ("HDlseek");
+ HDexit (EXIT_FAILURE);
+ }
+ if (HDwrite (dst, buf, 1)<0) {
+ HDperror ("write");
+ HDexit (EXIT_FAILURE);
+ }
}
HDclose (dst);
/* Modify family driver information saved in superblock through private property.
* These private properties are for this tool only. */
- if ((fapl=H5Pcreate(H5P_FILE_ACCESS))<0) {
- perror ("H5Pcreate");
- exit (EXIT_FAILURE);
+ if ((fapl=H5Pcreate(H5P_FILE_ACCESS)) < 0) {
+ HDperror ("H5Pcreate");
+ HDexit (EXIT_FAILURE);
}
if(family_to_single) {
@@ -433,23 +449,24 @@ main (int argc, char *argv[])
* the library to ignore the family driver information saved in the superblock.
*/
if(H5Pset(fapl, H5F_ACS_FAMILY_TO_SINGLE_NAME, &family_to_single) < 0) {
- perror ("H5Pset");
- exit (EXIT_FAILURE);
+ HDperror ("H5Pset");
+ HDexit (EXIT_FAILURE);
}
- } else {
+ }
+ else {
/* Modify family size saved in superblock through private property. It signals
* library to save the new member size(specified in command line) in superblock.
* This private property is for this tool only. */
if(H5Pset_fapl_family(fapl, H5F_FAMILY_DEFAULT, H5P_DEFAULT) < 0) {
- perror ("H5Pset_fapl_family");
- exit (EXIT_FAILURE);
+ HDperror ("H5Pset_fapl_family");
+ HDexit (EXIT_FAILURE);
}
/* Set the property of the new member size as hsize_t */
hdsize = (hsize_t)dst_size;
if(H5Pset(fapl, H5F_ACS_FAMILY_NEWSIZE_NAME, &hdsize) < 0) {
- perror ("H5Pset");
- exit (EXIT_FAILURE);
+ HDperror ("H5Pset");
+ HDexit (EXIT_FAILURE);
}
}
@@ -465,16 +482,16 @@ main (int argc, char *argv[])
file = H5Fopen(dst_gen_name, H5F_ACC_RDWR, fapl);
} H5E_END_TRY;
- if(file>=0) {
- if(H5Fclose(file)<0) {
- perror ("H5Fclose");
- exit (EXIT_FAILURE);
+ if(file >= 0) {
+ if(H5Fclose(file) < 0) {
+ HDperror("H5Fclose");
+ HDexit(EXIT_FAILURE);
} /* end if */
} /* end if */
- if(H5Pclose(fapl)<0) {
- perror ("H5Pclose");
- exit (EXIT_FAILURE);
+ if(H5Pclose(fapl) < 0) {
+ HDperror("H5Pclose");
+ HDexit(EXIT_FAILURE);
} /* end if */
/* Free resources and return */
generated by cgit v0.12 at 2024-11-02 02:18:23 (GMT)