summaryrefslogtreecommitdiffstats
path: root/tools/test/h5repack
diff options
context:
space:
mode:
Diffstat (limited to 'tools/test/h5repack')
-rw-r--r--tools/test/h5repack/CMakeLists.txt79
-rw-r--r--tools/test/h5repack/CMakeTests.cmake1153
-rw-r--r--tools/test/h5repack/Makefile.am67
-rw-r--r--tools/test/h5repack/dynlib_rpk.c97
-rw-r--r--tools/test/h5repack/dynlib_vrpk.c104
-rw-r--r--tools/test/h5repack/h5repack.sh.in1265
-rw-r--r--tools/test/h5repack/h5repack_plugin.sh.in275
-rw-r--r--tools/test/h5repack/h5repacktst.c6856
-rw-r--r--tools/test/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl112
-rw-r--r--tools/test/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl70
-rw-r--r--tools/test/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl147
-rw-r--r--tools/test/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl58
-rw-r--r--tools/test/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl59
-rw-r--r--tools/test/h5repack/testfiles/README5
-rw-r--r--tools/test/h5repack/testfiles/deflate_limit.h5repack_layout.h5.ddl130
-rw-r--r--tools/test/h5repack/testfiles/h5repack-help.txt125
-rw-r--r--tools/test/h5repack/testfiles/h5repack.info1
-rw-r--r--tools/test/h5repack/testfiles/h5repack_attr.h5bin0 -> 21856 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_attr_refs.h5bin0 -> 10336 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_deflate.h5bin0 -> 6336 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_early.h5bin0 -> 3074224 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_ext.binbin0 -> 8 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_ext.h5bin0 -> 1464 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_fill.h5bin0 -> 2168 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_filters.h5bin0 -> 27604 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst13
-rw-r--r--tools/test/h5repack/testfiles/h5repack_fletcher.h5bin0 -> 7232 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_hlink.h5bin0 -> 6544 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.UD.h5bin0 -> 43744 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.UD.h5-plugin_none.ddl130
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5bin0 -> 29480 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst38
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_test.ddl158
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl158
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_zero.tst9
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout.h5.ddl606
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout2.h5bin0 -> 6808 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layout3.h5bin0 -> 491840 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_layouto.h5bin0 -> 1576 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_named_dtypes.h5bin0 -> 4320 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_nbit.h5bin0 -> 13208 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_nested_8bit_enum.h5bin0 -> 273992 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5bin0 -> 120630 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_objs.h5bin0 -> 19738 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_refs.h5bin0 -> 10336 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_shuffle.h5bin0 -> 7216 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_soffset.h5bin0 -> 12452 bytes
-rw-r--r--tools/test/h5repack/testfiles/h5repack_szip.h5bin0 -> 5588 bytes
-rw-r--r--tools/test/h5repack/testfiles/plugin_none.h5repack_layout.UD.h5.tst14
-rw-r--r--tools/test/h5repack/testfiles/plugin_test.h5repack_layout.h5.tst14
-rw-r--r--tools/test/h5repack/testfiles/plugin_version_test.h5repack_layout.h5.tst14
-rw-r--r--tools/test/h5repack/testfiles/ublock.bin1
-rw-r--r--tools/test/h5repack/testh5repack_detect_szip.c62
53 files changed, 11820 insertions, 0 deletions
diff --git a/tools/test/h5repack/CMakeLists.txt b/tools/test/h5repack/CMakeLists.txt
new file mode 100644
index 0000000..cecec53
--- /dev/null
+++ b/tools/test/h5repack/CMakeLists.txt
@@ -0,0 +1,79 @@
+cmake_minimum_required (VERSION 3.1.0)
+PROJECT (HDF5_TOOLS_TEST_H5REPACK)
+
+#-----------------------------------------------------------------------------
+# Setup include Directories
+#-----------------------------------------------------------------------------
+INCLUDE_DIRECTORIES (${HDF5_TOOLS_DIR}/lib)
+INCLUDE_DIRECTORIES (${HDF5_TOOLS_DIR}/src/h5repack)
+INCLUDE_DIRECTORIES (${HDF5_TEST_SRC_DIR})
+
+# --------------------------------------------------------------------
+# Add h5Repack test executables
+# --------------------------------------------------------------------
+add_executable (testh5repack_detect_szip ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testh5repack_detect_szip.c)
+TARGET_NAMING (testh5repack_detect_szip STATIC)
+TARGET_C_PROPERTIES (testh5repack_detect_szip STATIC " " " ")
+target_link_libraries (testh5repack_detect_szip ${HDF5_LIB_TARGET} ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
+set_target_properties (testh5repack_detect_szip PROPERTIES FOLDER tools)
+
+set (REPACK_COMMON_SOURCES
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_copy.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_filters.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_opttable.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_parse.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_refs.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack_verify.c
+ ${HDF5_TOOLS_SRC_H5REPACK_SOURCE_DIR}/h5repack.c
+)
+add_executable (h5repacktest ${REPACK_COMMON_SOURCES} ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/h5repacktst.c)
+TARGET_NAMING (h5repacktest STATIC)
+TARGET_C_PROPERTIES (h5repacktest STATIC " " " ")
+target_link_libraries (h5repacktest ${HDF5_TOOLS_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
+set_target_properties (h5repacktest PROPERTIES FOLDER tools)
+
+ #-----------------------------------------------------------------------------
+ # If plugin library tests can be tested
+ #-----------------------------------------------------------------------------
+ set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibadd")
+ set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}")
+ set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME})
+ set (HDF5_TOOL_PLUGIN_LIB_VCORENAME "dynlibvers")
+ set (HDF5_TOOL_PLUGIN_LIB_VNAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_VCORENAME}")
+ set (HDF5_TOOL_PLUGIN_LIB_VTARGET ${HDF5_TOOL_PLUGIN_LIB_VCORENAME})
+ add_definitions (${HDF_EXTRA_C_FLAGS})
+ INCLUDE_DIRECTORIES (${HDF5_SRC_DIR})
+
+ add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c)
+ TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED " " " ")
+ target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TEST_LIB_TARGET})
+ H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED ${HDF5_PACKAGE_SOVERSION})
+
+ add_library (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED dynlib_vrpk.c)
+ TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED " " " ")
+ target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_VTARGET} ${HDF5_TEST_LIB_TARGET})
+ H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_VTARGET} ${HDF5_TOOL_PLUGIN_LIB_VNAME} SHARED ${HDF5_PACKAGE_SOVERSION})
+
+ # make plugins dir
+ file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins")
+ #-----------------------------------------------------------------------------
+ # Copy plugin library to a plugins folder
+ #-----------------------------------------------------------------------------
+ add_custom_command (
+ TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET}
+ POST_BUILD
+ COMMAND ${CMAKE_COMMAND}
+ ARGS -E copy_if_different
+ "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>"
+ "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>"
+ )
+ add_custom_command (
+ TARGET ${HDF5_TOOL_PLUGIN_LIB_VTARGET}
+ POST_BUILD
+ COMMAND ${CMAKE_COMMAND}
+ ARGS -E copy_if_different
+ "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>"
+ "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>"
+ )
+
+ include (CMakeTests.cmake)
diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake
new file mode 100644
index 0000000..f3ef2a5
--- /dev/null
+++ b/tools/test/h5repack/CMakeTests.cmake
@@ -0,0 +1,1153 @@
+
+##############################################################################
+##############################################################################
+### T E S T I N G ###
+##############################################################################
+##############################################################################
+
+ if (HDF5_TEST_VFD)
+ set (VFD_LIST
+ sec2
+ stdio
+ core
+ split
+ multi
+ family
+ )
+
+ if (DIRECT_VFD)
+ set (VFD_LIST ${VFD_LIST} direct)
+ endif (DIRECT_VFD)
+
+ MACRO (ADD_VFD_TEST vfdname resultcode)
+ add_test (
+ NAME H5REPACK-VFD-${vfdname}-h5repacktest
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>"
+ -D "TEST_ARGS:STRING="
+ -D "TEST_VFD:STRING=${vfdname}"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_OUTPUT=h5repacktest"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}"
+ -P "${HDF_RESOURCES_DIR}/vfdTest.cmake"
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test})
+ endif (NOT "${last_test}" STREQUAL "")
+ set (last_test "H5REPACK-VFD-${vfdname}-h5repacktest")
+ ENDMACRO (ADD_VFD_TEST)
+ endif (HDF5_TEST_VFD)
+
+ # --------------------------------------------------------------------
+ # Copy all the HDF5 files from the source directory into the test directory
+ # --------------------------------------------------------------------
+ set (LIST_HDF5_TEST_FILES
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_attr.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_attr_refs.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_deflate.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_early.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_ext.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fill.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_filters.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_fletcher.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_hlink.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layouto.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout2.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout3.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.UD.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_named_dtypes.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_nbit.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_objs.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_refs.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_shuffle.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_soffset.h5
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_szip.h5
+ # h5diff/testfile
+ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_attr1.h5
+ # tools/testfiles
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00000.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00001.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00002.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00003.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00004.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00005.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00006.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00007.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00008.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00009.h5
+ ${HDF5_TOOLS_DIR}/testfiles/tfamily00010.h5
+ # tools/testfiles/vds
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_a.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_b.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_c.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_d.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_e.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_f.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/1_vds.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_a.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_b.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_c.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_d.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_e.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/2_vds.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/3_1_vds.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/3_2_vds.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/4_0.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/4_1.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/4_2.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/4_vds.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/5_a.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/5_b.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/5_c.h5
+ ${HDF5_TOOLS_DIR}/testfiles/vds/5_vds.h5
+ )
+
+ set (LIST_OTHER_TEST_FILES
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack-help.txt
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_ext.bin
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/ublock.bin
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack.info
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/deflate_limit.h5repack_layout.h5.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5-plugin_test.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_test.h5repack_layout.h5.tst
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.UD.h5-plugin_none.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_none.h5repack_layout.UD.h5.tst
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5-plugin_version_test.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/plugin_version_test.h5repack_layout.h5.tst
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/4_vds.h5-vds_compa-v.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/4_vds.h5-vds_conti-v.ddl
+ ${HDF5_TOOLS_TEST_H5REPACK_SOURCE_DIR}/testfiles/h5repack_layout.h5-plugin_zero.tst
+ )
+
+ foreach (h5_file ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
+ get_filename_component(fname "${h5_file}" NAME)
+ HDFTEST_COPY_FILE("${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${fname}" "h5repack_files")
+ endforeach (h5_file ${LIST_HDF5_TEST_FILES} ${LIST_OTHER_TEST_FILES})
+ add_custom_target(h5repack_files ALL COMMENT "Copying files needed by h5repack tests" DEPENDS ${h5repack_files_list})
+
+##############################################################################
+##############################################################################
+### T H E T E S T S M A C R O S ###
+##############################################################################
+##############################################################################
+
+ MACRO (ADD_HELP_TEST testname resultcode)
+ # If using memchecker add tests without using scripts
+ if (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (NAME H5REPACK-${testname} COMMAND $<TARGET_FILE:h5repack> ${ARGN})
+ set_tests_properties (H5REPACK-${testname} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ set (last_test "H5REPACK-${testname}")
+ else (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK-h5repack-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
+ -D "TEST_ARGS:STRING=${ARGN}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=h5repack-${testname}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=h5repack-${testname}.txt"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ endif (HDF5_ENABLE_USING_MEMCHECKER)
+ ENDMACRO (ADD_HELP_TEST)
+
+ MACRO (ADD_H5_TEST_OLD testname testtype testfile)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_OLD-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ add_test (
+ NAME H5REPACK_OLD-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} -i ${PROJECT_BINARY_DIR}/testfiles/${testfile} -o ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_OLD-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ add_test (
+ NAME H5REPACK_OLD-${testname}_DFF
+ COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ set_tests_properties (H5REPACK_OLD-${testname}_DFF PROPERTIES DEPENDS H5REPACK_OLD-${testname})
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_TEST_OLD)
+
+ MACRO (ADD_H5_TEST testname testtype testfile)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ add_test (
+ NAME H5REPACK-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ add_test (
+ NAME H5REPACK-${testname}_DFF
+ COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ set_tests_properties (H5REPACK-${testname}_DFF PROPERTIES DEPENDS H5REPACK-${testname})
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_TEST)
+
+ MACRO (ADD_H5_CMP_TEST testname testfilter testtype resultcode resultfile)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_CMP-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ # If using memchecker add tests without using scripts
+ if (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_CMP-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile})
+ else (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_CMP-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
+ -D "TEST_ARGS:STRING=${ARGN};${resultfile};out-${testname}.${resultfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${resultfile}-${testname}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_FILTER:STRING=${testfilter}"
+ -D "TEST_REFERENCE=${resultfile}-${testname}.tst"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ endif (HDF5_ENABLE_USING_MEMCHECKER)
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_CMP-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_CMP_TEST)
+
+ MACRO (ADD_H5_MASK_TEST testname testtype resultcode resultfile)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_MASK-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ # If using memchecker add tests without using scripts
+ if (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_MASK-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile})
+ else (HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_MASK-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
+ -D "TEST_ARGS:STRING=${ARGN};${resultfile};out-${testname}.${resultfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${resultfile}-${testname}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_MASK_ERROR=true"
+ -D "TEST_REFERENCE=${resultfile}-${testname}.tst"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ endif (HDF5_ENABLE_USING_MEMCHECKER)
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_MASK-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_MASK_TEST)
+
+ MACRO (ADD_H5_DMP_TEST testname testtype resultcode resultfile)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_DMP-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ # If using memchecker add tests without using scripts
+ add_test (
+ NAME H5REPACK_DMP-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${resultfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile})
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_DMP-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_DMP-h5dump-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=-pH;out-${testname}.${resultfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${resultfile}-${testname}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=${testname}.${resultfile}.ddl"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ set_tests_properties (H5REPACK_DMP-h5dump-${testname} PROPERTIES DEPENDS "H5REPACK_DMP-${testname}")
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_DMP_TEST)
+
+ MACRO (ADD_H5_VERIFY_TEST testname testtype resultcode testfile testdset testfilter)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT-${testname}_DFF
+ COMMAND $<TARGET_FILE:h5diff> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT-${testname}_DFF PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname})
+ if ("${resultcode}" STREQUAL "0")
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT-${testname}_DMP
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=-d;${testdset};-pH;out-${testname}.${testfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${testfile}-${testname}-v.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_FILTER:STRING=${testfilter}"
+ -D "TEST_REFERENCE=${testfilter}"
+ -P "${HDF_RESOURCES_EXT_DIR}/grepTest.cmake"
+ )
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT-${testname}_DMP PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname}_DFF)
+ else ("${resultcode}" STREQUAL "0")
+ if ("${testfilter}" STREQUAL "CHUNKED")
+ set (nottestfilter "(CONTIGUOUS|COMPACT)")
+ endif ()
+ if ("${testfilter}" STREQUAL "CONTIGUOUS")
+ set (nottestfilter "(CHUNK|COMPACT)")
+ endif ()
+ if ("${testfilter}" STREQUAL "COMPACT")
+ set (nottestfilter "(CONTIGUOUS|CHUNK)")
+ endif ()
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT-${testname}_DMP
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=-pH;out-${testname}.${testfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${testfile}-${testname}-v.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_FILTER:STRING=${nottestfilter}"
+ -D "TEST_REFERENCE=${testfilter}"
+ -P "${HDF_RESOURCES_EXT_DIR}/grepTest.cmake"
+ )
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT-${testname}_DMP PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT-${testname}_DFF)
+ endif ("${resultcode}" STREQUAL "0")
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_VERIFY_TEST)
+
+ MACRO (ADD_H5_VERIFY_VDS testname testtype resultcode testfile testdset testfilter)
+ if ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT_VDS-${testname}-SKIPPED
+ COMMAND ${CMAKE_COMMAND} -E echo "SKIP -d ${testdset} -pH ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${resultfile}"
+ )
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ else ("${testtype}" STREQUAL "SKIP")
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT_VDS-${testname}
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}.${testfile}
+ )
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT_VDS-${testname} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT_VDS-${testname} PROPERTIES DEPENDS ${last_test})
+ endif ()
+ add_test (
+ NAME H5REPACK_VERIFY_LAYOUT_VDS-${testname}_DMP
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=-d;${testdset};-p;out-${testname}.${testfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${testfile}-${testname}-v.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=${testfile}-${testname}-v.ddl"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT_VDS-${testname}_DMP PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles")
+ set_tests_properties (H5REPACK_VERIFY_LAYOUT_VDS-${testname}_DMP PROPERTIES DEPENDS H5REPACK_VERIFY_LAYOUT_VDS-${testname})
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ endif ("${testtype}" STREQUAL "SKIP")
+ ENDMACRO (ADD_H5_VERIFY_VDS)
+
+ MACRO (ADD_H5_TEST_META testname testfile)
+ add_test (
+ NAME H5REPACK_META-${testname}_N
+ COMMAND $<TARGET_FILE:h5repack> ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_N.${testname}.h5
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK_META-${testname}_N PROPERTIES DEPENDS ${last_test})
+ endif ()
+ add_test (
+ NAME H5REPACK_META-${testname}_M
+ COMMAND $<TARGET_FILE:h5repack> ${ARGN} ${PROJECT_BINARY_DIR}/testfiles/${testfile} ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_M.${testname}.h5
+ )
+ set_tests_properties (H5REPACK_META-${testname}_M PROPERTIES DEPENDS H5REPACK_META-${testname}_N)
+
+ add_test (NAME H5REPACK_META-${testname} COMMAND ${CMAKE_COMMAND} -E compare_files ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_N.${testname}.h5 ${PROJECT_BINARY_DIR}/testfiles/out-${testname}_M.${testname}.h5)
+ set_tests_properties (H5REPACK_META-${testname} PROPERTIES WILL_FAIL "true")
+ set_tests_properties (H5REPACK_META-${testname} PROPERTIES DEPENDS H5REPACK_META-${testname}_M)
+ ENDMACRO (ADD_H5_TEST_META)
+
+ MACRO (ADD_H5_UD_TEST testname resultcode resultfile)
+ if (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ # Remove any output file left over from previous test run
+ add_test (
+ NAME H5REPACK_UD-${testname}-clearall-objects
+ COMMAND ${CMAKE_COMMAND}
+ -E remove
+ testfiles/out-${testname}.${resultfile}
+ )
+ add_test (
+ NAME H5REPACK_UD-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5repack>"
+ -D "TEST_ARGS:STRING=${ARGN};${resultfile};out-${testname}.${resultfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_FILTER:STRING=O?...ing file[^\n]+\n"
+ -D "TEST_OUTPUT=${testname}.${resultfile}.out"
+ -D "TEST_REFERENCE=${testname}.${resultfile}.tst"
+ -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH"
+ -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}/plugins"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ set_tests_properties (H5REPACK_UD-${testname} PROPERTIES DEPENDS H5REPACK_UD-${testname}-clearall-objects)
+ add_test (
+ NAME H5REPACK_UD-h5dump-${testname}
+ COMMAND "${CMAKE_COMMAND}"
+ -D "TEST_PROGRAM=$<TARGET_FILE:h5dump>"
+ -D "TEST_ARGS:STRING=-pH;out-${testname}.${resultfile}"
+ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles"
+ -D "TEST_OUTPUT=${resultfile}-${testname}.out"
+ -D "TEST_EXPECT=${resultcode}"
+ -D "TEST_REFERENCE=${resultfile}-${testname}.ddl"
+ -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH"
+ -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}/plugins"
+ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake"
+ )
+ set_tests_properties (H5REPACK_UD-h5dump-${testname} PROPERTIES DEPENDS "H5REPACK_UD-${testname}")
+ endif (NOT HDF5_ENABLE_USING_MEMCHECKER)
+ ENDMACRO (ADD_H5_UD_TEST)
+
+##############################################################################
+##############################################################################
+### T H E T E S T S ###
+##############################################################################
+##############################################################################
+
+ # --------------------------------------------------------------------
+ # test file names
+ # --------------------------------------------------------------------
+ set (INFO_FILE testfiles/h5repack.info)
+
+ set (FILE0 h5repack_fill.h5)
+ set (FILE1 h5repack_objs.h5)
+ set (FILE2 h5repack_attr.h5)
+ set (FILE3 h5repack_hlink.h5)
+ set (FILE4 h5repack_layout.h5)
+ set (FILE5 h5repack_early.h5)
+ set (FILE7 h5repack_szip.h5)
+ set (FILE8 h5repack_deflate.h5)
+ set (FILE9 h5repack_shuffle.h5)
+ set (FILE10 h5repack_fletcher.h5)
+ set (FILE11 h5repack_filters.h5)
+ set (FILE12 h5repack_nbit.h5)
+ set (FILE13 h5repack_soffset.h5)
+ set (FILE14 h5repack_layouto.h5 ) # A file with an older version of the layout message (copy of test/tlayouto.h5)
+ set (FILE15 h5repack_named_dtypes.h5)
+ set (FILE16 tfamily%05d.h5) # located in common testfiles folder
+ set (FILE18 h5repack_layout2.h5)
+ set (FILE_REF h5repack_refs.h5)
+ set (FILE_ATTR_REF h5repack_attr_refs.h5)
+ set (FILEV1 1_vds.h5)
+ set (FILEV2 2_vds.h5)
+ set (FILEV3_1 3_1_vds.h5)
+ set (FILEV3_2 3_2_vds.h5)
+ set (FILEV4 4_vds.h5)
+ set (FILEV5 5_vds.h5)
+
+ # Remove any output file left over from previous test run
+ add_test (
+ NAME H5REPACK-clearall-objects
+ COMMAND ${CMAKE_COMMAND}
+ -E remove
+ ./testfiles/h5dump-help.out
+ ./testfiles/h5repack_filters.h5-gzip_verbose_filters.out
+ ./testfiles/h5repack_filters.h5-gzip_verbose_filters.out.err
+ ./testfiles/h5repack_layout.h5-chunk_18x13-v.out
+ ./testfiles/h5repack_layout.h5-chunk_18x13-v.out.err
+ ./testfiles/h5repack_layout.h5-chunk_20x10-v.out
+ ./testfiles/h5repack_layout.h5-chunk_20x10-v.out.err
+ ./testfiles/h5repack_layout.h5-chunk_compa-v.out
+ ./testfiles/h5repack_layout.h5-chunk_compa-v.out.err
+ ./testfiles/h5repack_layout.h5-chunk_conti-v.out
+ ./testfiles/h5repack_layout.h5-chunk_conti-v.out.err
+ ./testfiles/h5repack_layout.h5-compa-v.out
+ ./testfiles/h5repack_layout.h5-compa-v.out.err
+ ./testfiles/h5repack_layout.h5-conti-v.out
+ ./testfiles/h5repack_layout.h5-conti-v.out.err
+ ./testfiles/h5repack_layout.h5-deflate_limit.out
+ ./testfiles/h5repack_layout.h5-deflate_limit.out.err
+ ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-v.out
+ ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-v.out.err
+ ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.out
+ ./testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.out.err
+ ./testfiles/h5repack_layout.h5-dset2_compa-v.out
+ ./testfiles/h5repack_layout.h5-dset2_compa-v.out.err
+ ./testfiles/h5repack_layout.h5-dset2_conti-v.out
+ ./testfiles/h5repack_layout.h5-dset2_conti-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_compa_chunk-v.out
+ ./testfiles/h5repack_layout.h5-dset_compa_chunk-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_compa_compa-v.out
+ ./testfiles/h5repack_layout.h5-dset_compa_compa-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_compa_conti-v.out
+ ./testfiles/h5repack_layout.h5-dset_compa_conti-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_conti_chunk-v.out
+ ./testfiles/h5repack_layout.h5-dset_conti_chunk-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_conti_compa-v.out
+ ./testfiles/h5repack_layout.h5-dset_conti_compa-v.out.err
+ ./testfiles/h5repack_layout.h5-dset_conti_conti-v.out
+ ./testfiles/h5repack_layout.h5-dset_conti_conti-v.out.err
+ ./testfiles/h5repack_layout.h5-layout_long_switches-v.out
+ ./testfiles/h5repack_layout.h5-layout_long_switches-v.out.err
+ ./testfiles/h5repack_layout.h5-layout_short_switches-v.out
+ ./testfiles/h5repack_layout.h5-layout_short_switches-v.out.err
+ ./testfiles/h5repack_layout.h5-plugin_test.out
+ ./testfiles/h5repack_layout.h5-plugin_test.out.err
+ ./testfiles/h5repack_layout2.h5-contig_small_compa-v.out
+ ./testfiles/h5repack_layout2.h5-contig_small_compa-v.out.err
+ ./testfiles/h5repack_layout2.h5-contig_small_fixed_compa-v.out
+ ./testfiles/h5repack_layout2.h5-contig_small_fixed_compa-v.out.err
+ ./testfiles/h5repack_layout3.h5-ckdim_biger-v.out
+ ./testfiles/h5repack_layout3.h5-ckdim_biger-v.out.err
+ ./testfiles/h5repack_layout3.h5-ckdim_smaller-v.out
+ ./testfiles/h5repack_layout3.h5-ckdim_smaller-v.out.err
+ ./testfiles/h5repack_layout3.h5-chunk2chunk-v.out
+ ./testfiles/h5repack_layout3.h5-chunk2chunk-v.out.err
+ ./testfiles/h5repack_layout3.h5-chunk2compa-v.out
+ ./testfiles/h5repack_layout3.h5-chunk2compa-v.out.err
+ ./testfiles/h5repack_layout3.h5-chunk2conti-v.out
+ ./testfiles/h5repack_layout3.h5-chunk2conti-v.out.err
+ ./testfiles/h5repack_layout3.h5-error1-v.out
+ ./testfiles/h5repack_layout3.h5-error1-v.out.err
+ ./testfiles/h5repack_layout3.h5-error2-v.out
+ ./testfiles/h5repack_layout3.h5-error2-v.out.err
+ ./testfiles/h5repack_layout3.h5-error3-v.out
+ ./testfiles/h5repack_layout3.h5-error3-v.out.err
+ ./testfiles/out-family.tfamily%05d.h5
+ ./testfiles/out-HDFFV-7840.h5diff_attr1.h5
+ ./testfiles/out-attr.h5repack_attr.h5
+ ./testfiles/out-native_attr.h5repack_attr.h5
+ ./testfiles/out-HDFFV-5932.h5repack_attr_refs.h5
+ ./testfiles/out-deflate_copy.h5repack_deflate.h5
+ ./testfiles/out-deflate_remove.h5repack_deflate.h5
+ ./testfiles/out-early.h5repack_early.h5
+ ./testfiles/out-fill.h5repack_fill.h5
+ ./testfiles/out-native_fill.h5repack_fill.h5
+ ./testfiles/out-gzip_verbose_filters.h5repack_filters.h5
+ ./testfiles/out-fletcher_copy.h5repack_fletcher.h5
+ ./testfiles/out-fletcher_remove.h5repack_fletcher.h5
+ ./testfiles/out-hlink.h5repack_hlink.h5
+ ./testfiles/out-chunk_18x13.h5repack_layout.h5
+ ./testfiles/out-chunk_20x10.h5repack_layout.h5
+ ./testfiles/out-chunk_compa.h5repack_layout.h5
+ ./testfiles/out-chunk_conti.h5repack_layout.h5
+ ./testfiles/out-compa.h5repack_layout.h5
+ ./testfiles/out-conti.h5repack_layout.h5
+ ./testfiles/out-deflate_file.h5repack_layout.h5
+ ./testfiles/out-deflate_limit.h5repack_layout.h5
+ ./testfiles/out-dset2_chunk_20x10.h5repack_layout.h5
+ ./testfiles/out-dset2_compa.h5repack_layout.h5
+ ./testfiles/out-dset2_conti.h5repack_layout.h5
+ ./testfiles/out-dset_compa_chunk.h5repack_layout.h5
+ ./testfiles/out-dset_compa_compa.h5repack_layout.h5
+ ./testfiles/out-dset_compa_conti.h5repack_layout.h5
+ ./testfiles/out-dset_conti_chunk.h5repack_layout.h5
+ ./testfiles/out-dset_conti_compa.h5repack_layout.h5
+ ./testfiles/out-dset_conti_conti.h5repack_layout.h5
+ ./testfiles/out-fletcher_all.h5repack_layout.h5
+ ./testfiles/out-fletcher_individual.h5repack_layout.h5
+ ./testfiles/out-global_filters.h5repack_layout.h5
+ ./testfiles/out-gzip_all.h5repack_layout.h5
+ ./testfiles/out-gzip_individual.h5repack_layout.h5
+ ./testfiles/out-layout.h5repack_layout.h5
+ ./testfiles/out-layout_long_switches.h5repack_layout.h5
+ ./testfiles/out-layout_short_switches.h5repack_layout.h5
+ ./testfiles/out-old_style_layout_short_switches.h5repack_layout.h5
+ ./testfiles/out-plugin_test.h5repack_layout.h5
+ ./testfiles/out-shuffle_all.h5repack_layout.h5
+ ./testfiles/out-shuffle_individual.h5repack_layout.h5
+ ./testfiles/out-upgrade_layout.h5repack_layouto.h5
+ ./testfiles/out-contig_small_compa.h5repack_layout2.h5
+ ./testfiles/out-contig_small_fixed_compa.h5repack_layout2.h5
+ ./testfiles/out-ckdim_biger.h5repack_layout3.h5
+ ./testfiles/out-ckdim_smaller.h5repack_layout3.h5
+ ./testfiles/out-chunk2chunk.h5repack_layout3.h5
+ ./testfiles/out-chunk2compa.h5repack_layout3.h5
+ ./testfiles/out-chunk2conti.h5repack_layout3.h5
+ ./testfiles/out-error1.h5repack_layout3.h5
+ ./testfiles/out-error2.h5repack_layout3.h5
+ ./testfiles/out-error3.h5repack_layout3.h5
+ ./testfiles/out-error4.h5repack_layout3.h5
+ ./testfiles/out-committed_dt.h5repack_named_dtypes.h5
+ ./testfiles/out-nbit_add.h5repack_nbit.h5
+ ./testfiles/out-nbit_copy.h5repack_nbit.h5
+ ./testfiles/out-nbit_remove.h5repack_nbit.h5
+ ./testfiles/out-add_alignment.h5repack_objs.h5
+ ./testfiles/out-add_userblock.h5repack_objs.h5
+ ./testfiles/out-objs.h5repack_objs.h5
+ ./testfiles/out-gt_mallocsize.h5repack_objs.h5
+ ./testfiles/out-bug1814.h5repack_refs.h5
+ ./testfiles/out-shuffle_copy.h5repack_shuffle.h5
+ ./testfiles/out-shuffle_remove.h5repack_shuffle.h5
+ ./testfiles/out-scale_add.h5repack_soffset.h5
+ ./testfiles/out-scale_copy.h5repack_soffset.h5
+ ./testfiles/out-scale_remove.h5repack_soffset.h5
+ ./testfiles/out-meta_short_M.meta_short.h5
+ ./testfiles/out-meta_short_N.meta_short.h5
+ ./testfiles/out-meta_long_M.meta_long.h5
+ ./testfiles/out-meta_long_N.meta_long.h5
+ ./testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.out
+ ./testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.out.err
+ ./testfiles/2_vds.h5-vds_chunk3x6x9-v.out
+ ./testfiles/2_vds.h5-vds_chunk3x6x9-v.out.err
+ ./testfiles/3_1_vds.h5-vds_chunk2x5x8-v.out
+ ./testfiles/3_1_vds.h5-vds_chunk2x5x8-v.out.err
+ ./testfiles/4_vds.h5-vds_compa-v.out
+ ./testfiles/4_vds.h5-vds_compa-v.out.err
+ ./testfiles/4_vds.h5-vds_conti-v.out
+ ./testfiles/4_vds.h5-vds_conti-v.out.err
+ ./testfiles/out-vds_compa.4_vds.h5
+ ./testfiles/out-vds_conti.4_vds.h5
+ ./testfiles/out-vds_chunk2x5x8.3_1_vds.h5
+ ./testfiles/out-vds_chunk3x6x9.2_vds.h5
+ ./testfiles/out-vds_dset_chunk20x10x5.1_vds.h5
+ h5repack_attr.h5
+ h5repack_attr_out.h5
+ h5repack_attr_refs.h5
+ h5repack_big.h5
+ h5repack_deflate.h5
+ h5repack_deflate_out.h5
+ h5repack_early2.h5
+ h5repack_early.h5
+ h5repack_early_out.h5
+ h5repack_ext.h5
+ h5repack_ext_out.h5
+ h5repack_fill.h5
+ h5repack_fill_out.h5
+ h5repack_filters.h5
+ h5repack_filters_out.h5
+ h5repack_fletcher.h5
+ h5repack_fletcher_out.h5
+ h5repack_hlink.h5
+ h5repack_hlink_out.h5
+ h5repack_layout.h5
+ h5repack_layout_out.h5
+ h5repack_layout2.h5
+ h5repack_layout3.h5
+ h5repack_named_dtypes.h5
+ h5repack_named_dtypes_out.h5
+ h5repack_nbit.h5
+ h5repack_nbit_out.h5
+ h5repack_objs.h5
+ h5repack_objs_out.h5
+ h5repack_refs.h5
+ h5repack_shuffle.h5
+ h5repack_shuffle_out.h5
+ h5repack_soffset.h5
+ h5repack_soffset_out.h5
+ h5repack_szip.h5
+ h5repack_szip_out.h5
+ h5repack_ub.h5
+ h5repack_ub_out.h5
+ h5repack_ext.bin
+ ublock.bin
+ )
+ if (NOT "${last_test}" STREQUAL "")
+ set_tests_properties (H5REPACK-clearall-objects PROPERTIES DEPENDS ${last_test})
+ endif (NOT "${last_test}" STREQUAL "")
+
+ ADD_HELP_TEST(help 0 -h)
+
+ add_test (NAME H5REPACK-testh5repack_detect_szip COMMAND $<TARGET_FILE:testh5repack_detect_szip>)
+ if (HDF5_ENABLE_SZIP_SUPPORT)
+ if (HDF5_ENABLE_SZIP_ENCODING)
+ set (passRegex "yes")
+ set_tests_properties (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "yes")
+ else (HDF5_ENABLE_SZIP_ENCODING)
+ set (passRegex "no")
+ set_tests_properties (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no")
+ endif (HDF5_ENABLE_SZIP_ENCODING)
+ else (HDF5_ENABLE_SZIP_SUPPORT)
+ set (passRegex "no")
+ set_tests_properties (H5REPACK-testh5repack_detect_szip PROPERTIES PASS_REGULAR_EXPRESSION "no")
+ endif (HDF5_ENABLE_SZIP_SUPPORT)
+ set_tests_properties (H5REPACK-testh5repack_detect_szip PROPERTIES DEPENDS H5REPACK-clearall-objects)
+
+ add_test (NAME H5REPACK-h5repacktest COMMAND $<TARGET_FILE:h5repacktest>)
+ set_tests_properties (H5REPACK-h5repacktest PROPERTIES DEPENDS H5REPACK-testh5repack_detect_szip)
+ set (last_test "H5REPACK-h5repacktest")
+
+#
+# The tests
+# We use the files generated by h5repacktst
+# Each run generates "<file>.out.h5" and the tool h5diff is used to
+# compare the input and output files
+#
+# the tests are the same as the program h5repacktst, but run from the CLI
+#
+
+# See which filters are usable (and skip tests for filters we
+# don't have). Do this by searching H5pubconf.h to see which
+# filters are defined.
+
+# detect whether the encoder is present.
+ set (USE_FILTER_SZIP_ENCODER "no")
+ if (HDF5_ENABLE_SZIP_ENCODING)
+ set (USE_FILTER_SZIP_ENCODER ${testh5repack_detect_szip})
+ endif (HDF5_ENABLE_SZIP_ENCODING)
+
+ if (H5_HAVE_FILTER_DEFLATE)
+ set (USE_FILTER_DEFLATE "true")
+ endif (H5_HAVE_FILTER_DEFLATE)
+
+ if (H5_HAVE_FILTER_SZIP)
+ set (USE_FILTER_SZIP "true")
+ endif (H5_HAVE_FILTER_SZIP)
+
+# copy files (these files have no filters)
+ ADD_H5_TEST (fill "TEST" ${FILE0})
+ ADD_H5_TEST (objs "TEST" ${FILE1})
+ ADD_H5_TEST (attr "TEST" ${FILE2})
+ ADD_H5_TEST (hlink "TEST" ${FILE3})
+ ADD_H5_TEST (layout "TEST" ${FILE4})
+ ADD_H5_TEST (early "TEST" ${FILE5})
+
+# use $FILE4 to write some filters (this file has no filters)
+
+# gzip with individual object
+ set (arg ${FILE4} -f dset1:GZIP=1 -l dset1:CHUNK=20x10)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (gzip_individual ${TESTTYPE} ${arg})
+
+# gzip for all
+ set (arg ${FILE4} -f GZIP=1)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (gzip_all ${TESTTYPE} ${arg})
+
+# szip with individual object
+ set (arg ${FILE4} -f dset2:SZIP=8,EC -l dset2:CHUNK=20x10)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ ADD_H5_TEST (szip_individual ${TESTTYPE} ${arg})
+
+# szip for all
+ set (arg ${FILE4} -f SZIP=8,NN)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ ADD_H5_TEST (szip_all ${TESTTYPE} ${arg})
+
+# shuffle with individual object
+ set (arg ${FILE4} -f dset2:SHUF -l dset2:CHUNK=20x10)
+ ADD_H5_TEST (shuffle_individual "TEST" ${arg})
+
+# shuffle for all
+ set (arg ${FILE4} -f SHUF)
+ ADD_H5_TEST (shuffle_all "TEST" ${arg})
+
+# fletcher32 with individual object
+ set (arg ${FILE4} -f dset2:FLET -l dset2:CHUNK=20x10)
+ ADD_H5_TEST (fletcher_individual "TEST" ${arg})
+
+# fletcher32 for all
+ set (arg ${FILE4} -f FLET)
+ ADD_H5_TEST (fletcher_all "TEST" ${arg})
+
+# all filters
+ set (arg ${FILE4} -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (all_filters ${TESTTYPE} ${arg})
+
+# verbose gzip with individual object
+ set (arg ${FILE11} -v -f /dset_deflate:GZIP=9)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_CMP_TEST (gzip_verbose_filters "O?...ing file[^\n]+\n" ${TESTTYPE} 0 ${arg})
+
+###########################################################
+# the following tests assume the input files have filters
+###########################################################
+
+# szip copy
+ set (arg ${FILE7})
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ ADD_H5_TEST (szip_copy ${TESTTYPE} ${arg})
+
+# szip remove
+ set (arg ${FILE7} --filter=dset_szip:NONE)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP)
+ ADD_H5_TEST (szip_remove ${TESTTYPE} ${arg})
+
+# deflate copy
+ set (arg ${FILE8})
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (deflate_copy ${TESTTYPE} ${arg})
+
+# deflate remove
+ set (arg ${FILE8} -f dset_deflate:NONE)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (deflate_remove ${TESTTYPE} ${arg})
+
+# shuffle copy
+ set (arg ${FILE9})
+ ADD_H5_TEST (shuffle_copy "TEST" ${arg})
+
+# shuffle remove
+ set (arg ${FILE9} -f dset_shuffle:NONE)
+ ADD_H5_TEST (shuffle_remove "TEST" ${arg})
+
+# fletcher32 copy
+ set (arg ${FILE10})
+ ADD_H5_TEST (fletcher_copy "TEST" ${arg})
+
+# fletcher32 remove
+ set (arg ${FILE10} -f dset_fletcher32:NONE)
+ ADD_H5_TEST (fletcher_remove "TEST" ${arg})
+
+# nbit copy
+ set (arg ${FILE12})
+ ADD_H5_TEST (nbit_copy "TEST" ${arg})
+
+# nbit remove
+ set (arg ${FILE12} -f dset_nbit:NONE)
+ ADD_H5_TEST (nbit_remove "TEST" ${arg})
+
+# nbit add
+ set (arg ${FILE12} -f dset_int31:NBIT)
+ ADD_H5_TEST (nbit_add "TEST" ${arg})
+
+# scaleoffset copy
+ set (arg ${FILE13})
+ ADD_H5_TEST (scale_copy "TEST" ${arg})
+
+# scaleoffset add
+ set (arg ${FILE13} -f dset_none:SOFF=31,IN)
+ ADD_H5_TEST (scale_add "TEST" ${arg})
+
+# scaleoffset remove
+ set (arg ${FILE13} -f dset_scaleoffset:NONE)
+ ADD_H5_TEST (scale_remove "TEST" ${arg})
+
+# remove all filters
+ set (arg ${FILE11} -f NONE)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER)
+ ADD_H5_TEST (remove_all ${TESTTYPE} ${arg})
+
+#filter conversions
+ set (arg ${FILE8} -f dset_deflate:SZIP=8,NN)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_SZIP OR NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (deflate_convert ${TESTTYPE} ${arg})
+
+ set (arg ${FILE7} -f dset_szip:GZIP=1)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_SZIP OR NOT USE_FILTER_SZIP_ENCODER OR NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (szip_convert ${TESTTYPE} ${arg})
+
+#limit
+ set (arg ${FILE4} -f GZIP=1 -m 1024)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_DMP_TEST (deflate_limit ${TESTTYPE} 0 ${arg})
+
+#file
+ set (arg ${FILE4} -e ${INFO_FILE})
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (deflate_file ${TESTTYPE} ${arg})
+
+#########################################################
+# layout options (these files have no filters)
+#########################################################
+ ADD_H5_VERIFY_TEST (dset2_chunk_20x10 "TEST" 0 ${FILE4} dset2 CHUNKED --layout=dset2:CHUNK=20x10)
+ ADD_H5_VERIFY_TEST (chunk_20x10 "TEST" 1 ${FILE4} null CHUNKED -l CHUNK=20x10)
+ ADD_H5_VERIFY_TEST (dset2_conti "TEST" 0 ${FILE4} dset2 CONTIGUOUS -l dset2:CONTI)
+ ADD_H5_VERIFY_TEST (conti "TEST" 1 ${FILE4} null CONTIGUOUS -l CONTI)
+ ADD_H5_VERIFY_TEST (dset2_compa "TEST" 0 ${FILE4} dset2 COMPACT -l dset2:COMPA)
+ ADD_H5_VERIFY_TEST (compa "TEST" 1 ${FILE4} null COMPACT -l COMPA)
+ ADD_H5_MASK_TEST (dset2_chunk_20x10-errstk "TEST" 0 ${FILE4} --layout=dset2:CHUNK=20x10x5 --enable-error-stack)
+
+################################################################
+# layout conversions (file has no filters)
+###############################################################
+ ADD_H5_VERIFY_TEST (dset_compa_conti "TEST" 0 ${FILE4} dset_compact CONTIGUOUS -l dset_compact:CONTI)
+ ADD_H5_VERIFY_TEST (dset_compa_chunk "TEST" 0 ${FILE4} dset_compact CHUNKED -l dset_compact:CHUNK=2x5)
+ ADD_H5_VERIFY_TEST (dset_compa_compa "TEST" 0 ${FILE4} dset_compact COMPACT -l dset_compact:COMPA)
+ ADD_H5_VERIFY_TEST (dset_conti_compa "TEST" 0 ${FILE4} dset_contiguous COMPACT -l dset_contiguous:COMPA)
+ ADD_H5_VERIFY_TEST (dset_conti_chunk "TEST" 0 ${FILE4} dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6)
+ ADD_H5_VERIFY_TEST (dset_conti_conti "TEST" 0 ${FILE4} dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI)
+ ADD_H5_VERIFY_TEST (chunk_compa "TEST" 0 ${FILE4} dset_chunk COMPACT -l dset_chunk:COMPA)
+ ADD_H5_VERIFY_TEST (chunk_conti "TEST" 0 ${FILE4} dset_chunk CONTIGUOUS -l dset_chunk:CONTI)
+ ADD_H5_VERIFY_TEST (chunk_18x13 "TEST" 0 ${FILE4} dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13)
+
+# test convert small size dataset ( < 1k) to compact layout without -m
+ ADD_H5_VERIFY_TEST (contig_small_compa "TEST" 0 ${FILE18} contig_small COMPACT -l contig_small:COMPA)
+ ADD_H5_VERIFY_TEST (contig_small_fixed_compa "TEST" 0 ${FILE18} chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA)
+
+#---------------------------------------------------------------------------
+# Test file contains chunked datasets (need multiple dsets) with
+# unlimited max dims. (HDFFV-7933)
+# Use first dset to test.
+#---------------------------------------------------------------------------
+# chunk to chunk - specify chunk dim bigger than any current dim
+ ADD_H5_VERIFY_TEST (chunk2chunk "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300)
+
+# chunk to contiguous
+ ADD_H5_VERIFY_TEST (chunk2conti "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI)
+
+# chunk to compact - convert big dataset (should be > 64k) for this purpose,
+# should remain as original layout (chunk)
+ ADD_H5_VERIFY_TEST (chunk2compa "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA)
+
+#--------------------------------------------------------------------------
+# Test -f for some specific cases. Chunked dataset with unlimited max dims.
+# (HDFFV-8012)
+#--------------------------------------------------------------------------
+# - should not fail
+# - should not change max dims from unlimit
+
+# chunk dim is bigger than dataset dim. ( dset size < 64k )
+ ADD_H5_VERIFY_TEST (error1 "TEST" 0 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE)
+
+# chunk dim is bigger than dataset dim. ( dset size > 64k )
+ ADD_H5_VERIFY_TEST (error2 "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE)
+
+# chunk dims are smaller than dataset dims. ( dset size < 64k )
+ ADD_H5_VERIFY_TEST (error3 "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE)
+
+# file input - should not fail
+ ADD_H5_TEST (error4 "TEST" h5repack_layout3.h5 -f NONE)
+
+#--------------------------------------------------------------------------
+# Test base: Convert CHUNK to CONTI for a chunked dataset with small dataset
+# (dset size < 64K) and with unlimited max dims on a condition as follow.
+# (HDFFV-8214)
+#--------------------------------------------------------------------------
+# chunk dim is bigger than dataset dim. should succeed.
+ ADD_H5_VERIFY_TEST (ckdim_biger "TEST" 0 h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI)
+# chunk dim is smaller than dataset dim. should succeed.
+ ADD_H5_VERIFY_TEST (ckdim_smaller "TEST" 0 h5repack_layout3.h5 chunk_unlimit3 CONTI -l chunk_unlimit3:CONTI)
+
+
+
+# Native option
+# Do not use FILE1, as the named dtype will be converted to native, and h5diff will
+# report a difference.
+ ADD_H5_TEST (native_fill "TEST" ${FILE0} -n)
+ ADD_H5_TEST (native_attr "TEST" ${FILE2} -n)
+
+# latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
+ set (arg --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype])
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_TEST (layout_long_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED ${arg})
+
+# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
+ set (arg -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_TEST (layout_short_switches ${TESTTYPE} 1 ${FILE4} null CHUNKED ${arg})
+
+# several global filters
+ set (arg ${FILE4} --filter GZIP=1 --filter SHUF)
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST (global_filters ${TESTTYPE} ${arg})
+
+# syntax of -i infile -o outfile
+# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
+ set (arg ${FILE4} -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype])
+ set (TESTTYPE "LEGACY")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_TEST_OLD (old_style_layout_short_switches ${TESTTYPE} ${arg})
+
+# add a userblock to file
+ set (arg ${FILE1} -u ${PROJECT_BINARY_DIR}/testfiles/ublock.bin -b 2048)
+ ADD_H5_TEST (add_userblock "TEST" ${arg})
+
+# add alignment
+ set (arg ${FILE1} -t 1 -a 1)
+ ADD_H5_TEST (add_alignment "TEST" ${arg})
+
+# Check repacking file with old version of layout message (should get upgraded
+# to new version and be readable, etc.)
+ ADD_H5_TEST (upgrade_layout "TEST" ${FILE14})
+
+# test for datum size > H5TOOLS_MALLOCSIZE
+ ADD_H5_TEST (gt_mallocsize "TEST" ${FILE1} -f GZIP=1)
+
+# Check repacking file with committed datatypes in odd configurations
+ ADD_H5_TEST (committed_dt "TEST" ${FILE15})
+
+# tests family driver (file is located in common testfiles folder, uses TOOLTEST1
+ ADD_H5_TEST (family "TEST" ${FILE16})
+
+# test various references (bug 1814 and 1726)
+ ADD_H5_TEST (bug1814 "TEST" ${FILE_REF})
+
+# test attribute with various references (bug1797 / HDFFV-5932)
+# the references in attribute of compund or vlen datatype
+ ADD_H5_TEST (HDFFV-5932 "TEST" ${FILE_ATTR_REF})
+
+# Add test for memory leak in attirbute. This test is verified by CTEST.
+# 1. leak from vlen string
+# 2. leak from compound type without reference member
+# (HDFFV-7840, )
+# Note: this test is experimental for sharing test file among tools
+ ADD_H5_TEST (HDFFV-7840 "TEST" h5diff_attr1.h5)
+
+# tests for metadata block size option ('-M')
+ ADD_H5_TEST_META (meta_short h5repack_layout.h5 -M 8192)
+ ADD_H5_TEST_META (meta_long h5repack_layout.h5 --metadata_block_size=8192)
+
+# VDS tests
+
+################################################################
+# layout conversions
+###############################################################
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_VDS (vds_dset_chunk20x10x5 ${TESTTYPE} 0 ${FILEV1} vds_dset CHUNKED -l vds_dset:CHUNK=20x10x5)
+
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_VDS (vds_chunk2x5x8 ${TESTTYPE} 0 ${FILEV3_1} vds_dset CHUNKED -l vds_dset:CHUNK=2x5x8)
+
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_VDS (vds_chunk3x6x9 ${TESTTYPE} 0 ${FILEV2} vds_dset CHUNKED -l vds_dset:CHUNK=3x6x9)
+
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_VDS (vds_compa ${TESTTYPE} 0 ${FILEV4} vds_dset COMPACT -l vds_dset:COMPA)
+
+ set (TESTTYPE "TEST")
+ if (NOT USE_FILTER_DEFLATE)
+ set (TESTTYPE "SKIP")
+ endif (NOT USE_FILTER_DEFLATE)
+ ADD_H5_VERIFY_VDS (vds_conti ${TESTTYPE} 0 ${FILEV4} vds_dset CONTIGUOUS -l vds_dset:CONTI)
+
+##############################################################################
+### P L U G I N T E S T S
+##############################################################################
+ ADD_H5_UD_TEST (plugin_version_test 0 h5repack_layout.h5 -v -f UD=260,4,9,1,9,235)
+ ADD_H5_UD_TEST (plugin_test 0 h5repack_layout.h5 -v -f UD=257,1,9)
+ ADD_H5_UD_TEST (plugin_none 0 h5repack_layout.UD.h5 -v -f NONE)
+ # check for no parameters
+ set (TESTRETVAL 255)
+ if (WIN32)
+ set (TESTRETVAL -1)
+ endif()
+ ADD_H5_CMP_TEST (plugin_zero "" "TEST" ${TESTRETVAL} h5repack_layout.h5 -v -f UD=250,0)
+
+ if (HDF5_TEST_VFD)
+ # Run test with different Virtual File Driver
+ foreach (vfd ${VFD_LIST})
+ ADD_VFD_TEST (${vfd} 0)
+ endforeach (vfd ${VFD_LIST})
+ endif (HDF5_TEST_VFD)
diff --git a/tools/test/h5repack/Makefile.am b/tools/test/h5repack/Makefile.am
new file mode 100644
index 0000000..6c045c4
--- /dev/null
+++ b/tools/test/h5repack/Makefile.am
@@ -0,0 +1,67 @@
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html. COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic HDF5 document set and
+# is linked from the top-level documents page. It can also be found at
+# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
+# access to either file, you may request a copy from help@hdfgroup.org.
+##
+## Makefile.am
+## Run automake to generate a Makefile.in from this file.
+#
+# HDF5 Library Makefile(.in)
+#
+
+include $(top_srcdir)/config/commence.am
+
+# Include src, test, and tools/lib directories
+AM_CPPFLAGS+=-I$(top_srcdir)/src -I$(top_srcdir)/test -I$(top_srcdir)/tools/lib -I$(top_srcdir)/tools/src/h5repack
+
+# Test programs and scripts
+TEST_SCRIPT=h5repack.sh
+
+noinst_PROGRAMS=h5repacktst testh5repack_detect_szip
+
+SCRIPT_DEPEND=../../src/h5repack/h5repack$(EXEEXT) h5repacktst$(EXEEXT)
+if HAVE_SHARED_CONDITIONAL
+if USE_PLUGINS_CONDITIONAL
+ TEST_SCRIPT += h5repack_plugin.sh
+endif
+endif
+
+check_SCRIPTS=$(TEST_SCRIPT)
+
+# Depend on the hdf5 library, the tools library, the test library
+LDADD=$(LIBH5TOOLS) $(LIBH5TEST) $(LIBHDF5)
+
+testh5repack_detect_szip_SOURCES=testh5repack_detect_szip.c
+
+# Source files
+COMMON_SOURCES=../../src/h5repack/h5repack.c ../../src/h5repack/h5repack_copy.c ../../src/h5repack/h5repack_filters.c \
+ ../../src/h5repack/h5repack_opttable.c ../../src/h5repack/h5repack_parse.c ../../src/h5repack/h5repack_refs.c \
+ ../../src/h5repack/h5repack_verify.c
+h5repacktst_SOURCES=$(COMMON_SOURCES) h5repacktst.c
+
+
+if HAVE_SHARED_CONDITIONAL
+ # Build it as shared library if configure is enabled for shared library.
+ lib_LTLIBRARIES=libdynlibadd.la libdynlibvers.la
+ libdynlibadd_la_SOURCES=dynlib_rpk.c
+ libdynlibvers_la_SOURCES=dynlib_vrpk.c
+
+install-exec-hook:
+ $(RM) $(DESTDIR)$(libdir)/*dynlib*
+endif
+
+# Temporary files. *.h5 are generated by h5repack. They should
+# copied to the testfiles/ directory if update is required.
+CHECK_CLEANFILES+=*.h5 *.bin testfiles/h5diff_attr1.h5 testfiles/tfamily*.h5
+DISTCLEANFILES=h5repack.sh h5repack_plugin.sh
+
+include $(top_srcdir)/config/conclude.am
diff --git a/tools/test/h5repack/dynlib_rpk.c b/tools/test/h5repack/dynlib_rpk.c
new file mode 100644
index 0000000..3469e58
--- /dev/null
+++ b/tools/test/h5repack/dynlib_rpk.c
@@ -0,0 +1,97 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic document set and is *
+ * linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have access *
+ * to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+/*
+ * Programmer: Raymond Lu
+ * 13 February 2013
+ *
+ * Purpose: Tests the plugin module (H5PL)
+ */
+
+#include <stdlib.h>
+#include <stdio.h>
+#include "H5PLextern.h"
+
+#define H5Z_FILTER_DYNLIB1 257
+
+static size_t H5Z_filter_dynlib1(unsigned int flags, size_t cd_nelmts,
+ const unsigned int *cd_values, size_t nbytes, size_t *buf_size, void **buf);
+
+/* This message derives from H5Z */
+const H5Z_class2_t H5Z_DYNLIB1[1] = {{
+ H5Z_CLASS_T_VERS, /* H5Z_class_t version */
+ H5Z_FILTER_DYNLIB1, /* Filter id number */
+ 1, 1, /* Encoding and decoding enabled */
+ "dynlib1", /* Filter name for debugging */
+ NULL, /* The "can apply" callback */
+ NULL, /* The "set local" callback */
+ (H5Z_func_t)H5Z_filter_dynlib1, /* The actual filter function */
+}};
+
+H5PL_type_t H5PLget_plugin_type(void) {return H5PL_TYPE_FILTER;}
+const void *H5PLget_plugin_info(void) {return H5Z_DYNLIB1;}
+
+/*-------------------------------------------------------------------------
+ * Function: H5Z_filter_dynlib1
+ *
+ * Purpose: A dynlib1 filter method that adds on and subtract from
+ * the original value with another value. It will be built
+ * as a shared library. plugin.c test will load and use
+ * this filter library.
+ *
+ * Return: Success: Data chunk size
+ *
+ * Failure: 0
+ *
+ * Programmer: Raymond Lu
+ * 29 March 2013
+ *
+ *-------------------------------------------------------------------------
+ */
+static size_t
+H5Z_filter_dynlib1(unsigned int flags, size_t cd_nelmts,
+ const unsigned int *cd_values, size_t nbytes,
+ size_t *buf_size, void **buf)
+{
+ int *int_ptr = (int *)*buf; /* Pointer to the data values */
+ size_t buf_left = *buf_size; /* Amount of data buffer left to process */
+ int add_on = 0;
+
+ /* Check for the correct number of parameters */
+ if(cd_nelmts == 0)
+ return 0;
+
+ /* Check that permanent parameters are set correctly */
+ if(cd_values[0] > 9)
+ return 0;
+
+ add_on = (int)cd_values[0];
+
+ if(flags & H5Z_FLAG_REVERSE) { /*read*/
+ /* Substract the "add on" value to all the data values */
+ while(buf_left > 0) {
+ *int_ptr++ -= add_on;
+ buf_left -= sizeof(int);
+ } /* end while */
+ } /* end if */
+ else { /*write*/
+ /* Add the "add on" value to all the data values */
+ while(buf_left > 0) {
+ *int_ptr++ += add_on;
+ buf_left -= sizeof(int);
+ } /* end while */
+ } /* end else */
+
+ return nbytes;
+} /* end H5Z_filter_dynlib1() */
+
diff --git a/tools/test/h5repack/dynlib_vrpk.c b/tools/test/h5repack/dynlib_vrpk.c
new file mode 100644
index 0000000..8da0270
--- /dev/null
+++ b/tools/test/h5repack/dynlib_vrpk.c
@@ -0,0 +1,104 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic document set and is *
+ * linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have access *
+ * to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+/*
+ * Purpose: Tests the plugin module (H5PL)
+ */
+
+#include <stdlib.h>
+#include <stdio.h>
+#include "H5PLextern.h"
+
+#define H5Z_FILTER_DYNLIB4 260
+
+#define PUSH_ERR(func, minor, str) H5Epush2(H5E_DEFAULT, __FILE__, func, __LINE__, H5E_ERR_CLS, H5E_PLUGIN, minor, str)
+
+static size_t H5Z_filter_dynlib4(unsigned int flags, size_t cd_nelmts,
+ const unsigned int *cd_values, size_t nbytes, size_t *buf_size, void **buf);
+
+/* This message derives from H5Z */
+const H5Z_class2_t H5Z_DYNLIB4[1] = {{
+ H5Z_CLASS_T_VERS, /* H5Z_class_t version */
+ H5Z_FILTER_DYNLIB4, /* Filter id number */
+ 1, 1, /* Encoding and decoding enabled */
+ "dynlib4", /* Filter name for debugging */
+ NULL, /* The "can apply" callback */
+ NULL, /* The "set local" callback */
+ (H5Z_func_t)H5Z_filter_dynlib4, /* The actual filter function */
+}};
+
+H5PL_type_t H5PLget_plugin_type(void) {return H5PL_TYPE_FILTER;}
+const void *H5PLget_plugin_info(void) {return H5Z_DYNLIB4;}
+
+/*-------------------------------------------------------------------------
+ * Function: H5Z_filter_dynlib4
+ *
+ * Purpose: A dynlib4 filter method that adds on and subtract from
+ * the original value with another value. It will be built
+ * as a shared library. plugin.c test will load and use
+ * this filter library. Designed to call a HDF function.
+ *
+ * Return: Success: Data chunk size
+ *
+ * Failure: 0
+ *
+ *-------------------------------------------------------------------------
+ */
+static size_t
+H5Z_filter_dynlib4(unsigned int flags, size_t cd_nelmts,
+ const unsigned int *cd_values, size_t nbytes,
+ size_t *buf_size, void **buf)
+{
+ int *int_ptr = (int *)*buf; /* Pointer to the data values */
+ size_t buf_left = *buf_size; /* Amount of data buffer left to process */
+ int add_on = 0;
+ unsigned ver_info[3];
+
+ /* Check for the library version */
+ if(H5get_libversion(&ver_info[0], &ver_info[1], &ver_info[2]) < 0) {
+ PUSH_ERR("dynlib4", H5E_CALLBACK, "H5get_libversion");
+ return(0);
+ }
+ /* Check for the correct number of parameters */
+ if(cd_nelmts == 0)
+ return(0);
+
+ /* Check that permanent parameters are set correctly */
+ if(cd_values[0] > 9)
+ return(0);
+
+ if(ver_info[0] != cd_values[1] || ver_info[1] != cd_values[2]) {
+ PUSH_ERR("dynlib4", H5E_CALLBACK, "H5get_libversion does not match");
+ return(0);
+ }
+
+ add_on = (int)cd_values[0];
+
+ if(flags & H5Z_FLAG_REVERSE) { /*read*/
+ /* Substract the "add on" value to all the data values */
+ while(buf_left > 0) {
+ *int_ptr++ -= add_on;
+ buf_left -= sizeof(int);
+ } /* end while */
+ } /* end if */
+ else { /*write*/
+ /* Add the "add on" value to all the data values */
+ while(buf_left > 0) {
+ *int_ptr++ += add_on;
+ buf_left -= sizeof(int);
+ } /* end while */
+ } /* end else */
+
+ return nbytes;
+} /* end H5Z_filter_dynlib4() */
+
diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in
new file mode 100644
index 0000000..4d3cae8
--- /dev/null
+++ b/tools/test/h5repack/h5repack.sh.in
@@ -0,0 +1,1265 @@
+#! /bin/sh
+#
+# Copyright by The HDF Group.
+# Copyright by the Board of Trustees of the University of Illinois.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html. COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic HDF5 document set and
+# is linked from the top-level documents page. It can also be found at
+# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have
+# access to either file, you may request a copy from help@hdfgroup.org.
+#
+# Tests for the h5repack tool
+#
+# Modification:
+# Pedro Vicente Nunes, 11/15/2006
+# Added $FILEN variables for file names
+#
+
+srcdir=@srcdir@
+
+USE_FILTER_SZIP="@USE_FILTER_SZIP@"
+USE_FILTER_DEFLATE="@USE_FILTER_DEFLATE@"
+
+TESTNAME=h5repack
+EXIT_SUCCESS=0
+EXIT_FAILURE=1
+
+H5REPACK=../../src/h5repack/h5repack # The tool name
+H5REPACK_BIN=`pwd`/$H5REPACK # The path of the tool binary
+
+H5DIFF=../../src/h5diff/h5diff # The h5diff tool name
+H5DIFF_BIN=`pwd`/$H5DIFF # The path of the h5diff tool binary
+
+H5DUMP=../../src/h5dump/h5dump # The h5dump tool name
+H5DUMP_BIN=`pwd`/$H5DUMP # The path of the h5dump tool binary
+
+RM='rm -rf'
+CMP='cmp'
+DIFF='diff -c'
+GREP='grep'
+CP='cp'
+DIRNAME='dirname'
+LS='ls'
+AWK='awk'
+
+H5DETECTSZIP=testh5repack_detect_szip
+H5DETECTSZIP_BIN=`pwd`/$H5DETECTSZIP
+
+
+nerrors=0
+verbose=yes
+
+# source dirs
+SRC_TOOLS="$srcdir/../.."
+SRC_TOOLS_TESTFILES="$SRC_TOOLS/testfiles"
+
+# testfiles source dirs for tools
+SRC_H5LS_TESTFILES="$SRC_TOOLS_TESTFILES"
+SRC_H5DUMP_TESTFILES="$SRC_TOOLS_TESTFILES"
+SRC_H5DIFF_TESTFILES="$SRC_TOOLS/test/h5diff/testfiles"
+SRC_H5COPY_TESTFILES="$SRC_TOOLS/test/h5copy/testfiles"
+SRC_H5REPACK_TESTFILES="$SRC_TOOLS/test/h5repack/testfiles"
+SRC_H5JAM_TESTFILES="$SRC_TOOLS/test/h5jam/testfiles"
+SRC_H5STAT_TESTFILES="$SRC_TOOLS/test/h5stat/testfiles"
+SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/test/h5import/testfiles"
+
+TESTDIR=./testpack
+test -d $TESTDIR || mkdir $TESTDIR
+
+######################################################################
+# test files
+# --------------------------------------------------------------------
+# All the test files copy from source directory to test directory
+# NOTE: Keep this framework to add/remove test files.
+# Any test files from other tools can be used in this framework.
+# This list are also used for checking exist.
+# Comment '#' without space can be used.
+# --------------------------------------------------------------------
+LIST_HDF5_TEST_FILES="
+$SRC_H5REPACK_TESTFILES/h5repack_attr.h5
+$SRC_H5REPACK_TESTFILES/h5repack_attr_refs.h5
+$SRC_H5REPACK_TESTFILES/h5repack_deflate.h5
+$SRC_H5REPACK_TESTFILES/h5repack_early.h5
+$SRC_H5REPACK_TESTFILES/h5repack_ext.h5
+$SRC_H5REPACK_TESTFILES/h5repack_fill.h5
+$SRC_H5REPACK_TESTFILES/h5repack_filters.h5
+$SRC_H5REPACK_TESTFILES/h5repack_fletcher.h5
+$SRC_H5REPACK_TESTFILES/h5repack_hlink.h5
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5
+$SRC_H5REPACK_TESTFILES/h5repack_layouto.h5
+$SRC_H5REPACK_TESTFILES/h5repack_layout2.h5
+$SRC_H5REPACK_TESTFILES/h5repack_layout3.h5
+$SRC_H5REPACK_TESTFILES/h5repack_named_dtypes.h5
+$SRC_H5REPACK_TESTFILES/h5repack_nested_8bit_enum.h5
+$SRC_H5REPACK_TESTFILES/h5repack_nested_8bit_enum_deflated.h5
+$SRC_H5REPACK_TESTFILES/h5repack_nbit.h5
+$SRC_H5REPACK_TESTFILES/h5repack_objs.h5
+$SRC_H5REPACK_TESTFILES/h5repack_refs.h5
+$SRC_H5REPACK_TESTFILES/h5repack_shuffle.h5
+$SRC_H5REPACK_TESTFILES/h5repack_soffset.h5
+$SRC_H5REPACK_TESTFILES/h5repack_szip.h5
+$SRC_H5DIFF_TESTFILES/h5diff_attr1.h5
+$SRC_TOOLS_TESTFILES/tfamily00000.h5
+$SRC_TOOLS_TESTFILES/tfamily00001.h5
+$SRC_TOOLS_TESTFILES/tfamily00002.h5
+$SRC_TOOLS_TESTFILES/tfamily00003.h5
+$SRC_TOOLS_TESTFILES/tfamily00004.h5
+$SRC_TOOLS_TESTFILES/tfamily00005.h5
+$SRC_TOOLS_TESTFILES/tfamily00006.h5
+$SRC_TOOLS_TESTFILES/tfamily00007.h5
+$SRC_TOOLS_TESTFILES/tfamily00008.h5
+$SRC_TOOLS_TESTFILES/tfamily00009.h5
+$SRC_TOOLS_TESTFILES/tfamily00010.h5
+$SRC_TOOLS_TESTFILES/vds/1_a.h5
+$SRC_TOOLS_TESTFILES/vds/1_b.h5
+$SRC_TOOLS_TESTFILES/vds/1_c.h5
+$SRC_TOOLS_TESTFILES/vds/1_d.h5
+$SRC_TOOLS_TESTFILES/vds/1_e.h5
+$SRC_TOOLS_TESTFILES/vds/1_f.h5
+$SRC_TOOLS_TESTFILES/vds/1_vds.h5
+$SRC_TOOLS_TESTFILES/vds/2_a.h5
+$SRC_TOOLS_TESTFILES/vds/2_b.h5
+$SRC_TOOLS_TESTFILES/vds/2_c.h5
+$SRC_TOOLS_TESTFILES/vds/2_d.h5
+$SRC_TOOLS_TESTFILES/vds/2_e.h5
+$SRC_TOOLS_TESTFILES/vds/2_vds.h5
+$SRC_TOOLS_TESTFILES/vds/3_1_vds.h5
+$SRC_TOOLS_TESTFILES/vds/3_2_vds.h5
+$SRC_TOOLS_TESTFILES/vds/4_0.h5
+$SRC_TOOLS_TESTFILES/vds/4_1.h5
+$SRC_TOOLS_TESTFILES/vds/4_2.h5
+$SRC_TOOLS_TESTFILES/vds/4_vds.h5
+$SRC_TOOLS_TESTFILES/vds/5_a.h5
+$SRC_TOOLS_TESTFILES/vds/5_b.h5
+$SRC_TOOLS_TESTFILES/vds/5_c.h5
+$SRC_TOOLS_TESTFILES/vds/5_vds.h5
+"
+
+LIST_OTHER_TEST_FILES="
+$SRC_H5REPACK_TESTFILES/h5repack-help.txt
+$SRC_H5REPACK_TESTFILES/h5repack_ext.bin
+$SRC_H5REPACK_TESTFILES/ublock.bin
+$SRC_H5REPACK_TESTFILES/h5repack.info
+$SRC_H5REPACK_TESTFILES/deflate_limit.h5repack_layout.h5.ddl
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5.ddl
+$SRC_H5REPACK_TESTFILES/h5repack_filters.h5-gzip_verbose_filters.tst
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_test.ddl
+$SRC_H5REPACK_TESTFILES/plugin_test.h5repack_layout.h5.tst
+$SRC_H5REPACK_TESTFILES/1_vds.h5-vds_dset_chunk20x10x5-v.ddl
+$SRC_H5REPACK_TESTFILES/2_vds.h5-vds_chunk3x6x9-v.ddl
+$SRC_H5REPACK_TESTFILES/3_1_vds.h5-vds_chunk2x5x8-v.ddl
+$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_compa-v.ddl
+$SRC_H5REPACK_TESTFILES/4_vds.h5-vds_conti-v.ddl
+"
+
+#
+# copy test files and expected output files from source dirs to test dir
+#
+COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES"
+
+COPY_TESTFILES_TO_TESTDIR()
+{
+ # copy test files. Used -f to make sure get a new copy
+ for tstfile in $COPY_TESTFILES
+ do
+ # ignore '#' comment
+ echo $tstfile | tr -d ' ' | grep '^#' > /dev/null
+ RET=$?
+ if [ $RET -eq 1 ]; then
+ # skip cp if srcdir is same as destdir
+ # this occurs when build/test performed in source dir and
+ # make cp fail
+ SDIR=`$DIRNAME $tstfile`
+ INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
+ INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
+ if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
+ $CP -f $tstfile $TESTDIR
+ if [ $? -ne 0 ]; then
+ echo "Error: FAILED to copy $tstfile ."
+
+ # Comment out this to CREATE expected file
+ exit $EXIT_FAILURE
+ fi
+ fi
+ fi
+ done
+}
+
+CLEAN_TESTFILES_AND_TESTDIR()
+{
+ # skip rm if srcdir is same as destdir
+ # this occurs when build/test performed in source dir and
+ # make cp fail
+ SDIR=$SRC_H5REPACK_TESTFILES
+ INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
+ INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
+ if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
+ $RM $TESTDIR
+ fi
+}
+
+# Print a $* message left justified in a field of 70 characters
+#
+MESSAGE() {
+ SPACES=" "
+ echo "$* $SPACES" | cut -c1-70 | tr -d '\012'
+}
+
+# Print a line-line message left justified in a field of 70 characters
+# beginning with the word "Testing".
+#
+TESTING() {
+ MESSAGE "Testing $*"
+}
+
+# Print a line-line message left justified in a field of 70 characters
+# beginning with the word "Verifying".
+#
+VERIFY() {
+ MESSAGE "Verifying $*"
+}
+
+# Print a message that a test has been skipped (because a required filter
+# was unavailable)
+SKIP() {
+ TESTING $H5REPACK $@
+ echo " -SKIP-"
+}
+
+# Call the h5diff tool
+#
+DIFFTEST()
+{
+ VERIFY h5diff output $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5DIFF_BIN -q "$@"
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+
+}
+
+# Call h5repack
+#
+
+
+# call TOOLTEST_MAIN and delete $output file
+TOOLTEST()
+{
+ echo $@
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+ rm -f $outfile
+}
+
+#------------------------------------------
+# Verifying layouts of a dataset
+VERIFY_LAYOUT_DSET()
+{
+ layoutfile=layout-$1.$2
+ dset=$3
+ expectlayout=$4
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+ shift
+ shift
+
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+
+ #---------------------------------
+ # check the layout from a dataset
+ VERIFY "a dataset layout"
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5DUMP_BIN -d $dset -pH $outfile > $layoutfile
+ )
+ $GREP $expectlayout $TESTDIR/$layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " PASSED"
+ else
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ fi
+
+ # clean up tmp files
+ rm -f $outfile
+ rm -f $layoutfile
+}
+
+#------------------------------------------
+# Verifying layouts of a dataset
+VERIFY_LAYOUT_VDS()
+{
+ layoutfile=layout-$1.$2
+ dset=$3
+ expectlayout=$4
+ infile=$2
+ outfile=out-$1.$2
+
+ expect="$TESTDIR/$2-$1-v.ddl"
+ actual="$TESTDIR/$2-$1-v.out"
+ actual_err="$TESTDIR/$2-$1-v.err"
+
+ shift
+ shift
+ shift
+ shift
+
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+
+ #---------------------------------
+ # check the layout from a dataset
+ VERIFY "a dataset layout"
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5DUMP_BIN -d $dset -p $outfile
+ ) >$actual 2>$actual_err
+
+ cat $actual_err >> $actual
+
+ if [ ! -f $expect ]; then
+ # Create the expect file if it doesn't yet exist.
+ echo " CREATED"
+ cp $actual $expect
+ elif $CMP $expect $actual > /dev/null 2>&1 ; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.ddl) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $caseless $expect $actual |sed 's/^/ /'
+ fi
+
+ # Clean up output file
+ if test -z "$HDF5_NOCLEANUP"; then
+ rm -f $actual $actual_err
+ fi
+
+ # clean up tmp files
+ rm -f $outfile
+}
+
+#----------------------------------------
+# Verifying layouts from entire file
+VERIFY_LAYOUT_ALL()
+{
+ infile=$2
+ outfile=out-$1.$2
+ layoutfile=layout-$1.$2
+ expectlayout=$3
+ shift
+ shift
+ shift
+
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+
+
+ #---------------------------------
+ # check the layout from a dataset
+ # check if the other layouts still exsit
+ VERIFY "layouts"
+ (
+ cd $TESTDIR
+ echo
+ # if CONTIGUOUS
+ if [ $expectlayout = "CONTIGUOUS" ]; then
+ TESTING $H5DUMP_BIN -pH $outfile
+ (
+ $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+ )
+ $GREP "COMPACT" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ $GREP "CHUNKED" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+ fi
+ else
+ # if COMPACT
+ if [ $expectlayout = "COMPACT" ]; then
+ TESTING $H5DUMP_BIN -pH $outfile
+ (
+ $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+ )
+ $GREP "CHUNKED" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ $GREP "CONTIGUOUS" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+ fi
+ else
+ # if CHUNKED
+ if [ $expectlayout = "CHUNKED" ]; then
+ TESTING $H5DUMP_BIN -pH $outfile
+ (
+ $RUNSERIAL $H5DUMP_BIN -pH $outfile > $layoutfile
+ )
+ $GREP "CONTIGUOUS" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ $GREP "COMPACT" $layoutfile > /dev/null
+ if [ $? -eq 0 ]; then
+ echo " FAILED"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ fi
+ fi
+ fi
+ fi
+ fi
+ )
+
+ # clean up tmp files
+ rm -f $outfile
+ rm -f $layoutfile
+}
+
+# same as TOOLTEST, but it uses the old syntax -i input_file -o output_file
+#
+TOOLTEST0()
+{
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN -i $infile -o $outfile "$@"
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+ rm -f $outfile
+}
+
+
+# same as TOOLTEST, but it uses without -i -o options
+# used to test the family driver, where these files reside
+#
+TOOLTEST1()
+{
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+ rm -f $outfile
+}
+
+# This is same as TOOLTEST() with comparing display output
+# from -v option
+#
+TOOLTESTV()
+{
+ expect="$TESTDIR/$2-$1.tst"
+ actual="$TESTDIR/`basename $2 .ddl`.out"
+ actual_err="$TESTDIR/`basename $2 .ddl`.err"
+
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ ) >$actual 2>$actual_err
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+
+ # display output compare
+ STDOUT_FILTER $actual
+ cat $actual_err >> $actual
+
+ VERIFY output from $H5REPACK $@
+ if cmp -s $expect $actual; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.tst) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && diff -c $expect $actual |sed 's/^/ /'
+ fi
+
+ rm -f $actual $actual_err
+ rm -f $outfile
+}
+
+# same as TOOLTESTV but filters error stack output and compares to an error file
+# Extract file name, line number, version and thread IDs because they may be different
+# ADD_H5ERR_MASK_TEST
+TOOLTESTM() {
+
+ expect="$TESTDIR/$2-$1.tst"
+ actual="$TESTDIR/`basename $2 .tst`.out"
+ actual_err="$TESTDIR/`basename $2 .tst`.oerr"
+ actual_sav=${actual}-sav
+ actual_err_sav=${actual_err}-sav
+
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ ) >$actual 2>$actual_err
+
+ # save actual and actual_err in case they are needed later.
+ cp $actual $actual_sav
+ cp $actual_err $actual_err_sav
+
+ # Extract file name, line number, version and thread IDs because they may be different
+ sed -e 's/thread [0-9]*/thread (IDs)/' -e 's/: .*\.c /: (file name) /' \
+ -e 's/line [0-9]*/line (number)/' \
+ -e 's/v[1-9]*\.[0-9]*\./version (number)\./' \
+ -e 's/[1-9]*\.[0-9]*\.[0-9]*[^)]*/version (number)/' \
+ -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \
+ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \
+ $actual_err > $actual
+
+ if [ ! -f $expect ]; then
+ # Create the expect file if it doesn't yet exist.
+ echo " CREATED"
+ cp $actual $expect
+ elif $CMP $expect $actual; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.tst) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && $DIFF $expect $actual |sed 's/^/ /'
+ fi
+
+ # Clean up output file
+ if test -z "$HDF5_NOCLEANUP"; then
+ rm -f $actual $actual_err $actual_sav $actual_err_sav
+ fi
+
+}
+
+# This is same as TOOLTESTV() with comparing h5dump output
+# from -pH option
+#
+TOOLTEST_DUMP()
+{
+ infile=$2
+ outfile=out-$1.$2
+ expect="$TESTDIR/$1.$2.ddl"
+ actual="$TESTDIR/out-$1.$2.out"
+ actual_err="$TESTDIR/out-$1.$2.err"
+
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ ) >$actual 2>$actual_err
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ VERIFY h5dump output $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5DUMP_BIN -pH $outfile
+ ) >$actual 2>$actual_err
+ cat $actual_err >> $actual
+
+ RET=$?
+
+ fi
+
+ if cmp -s $expect $actual; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.ddl) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && diff -c $expect $actual |sed 's/^/ /'
+ fi
+
+ rm -f $actual $actual_err
+ rm -f $outfile
+}
+
+# TOOLTEST_META:
+# Test metadata block size option.
+# Reason to create a function here is to localize all special steps related to
+# metadata block size option in one place. This is a quick solution. More
+# thought out solution needed when there is more time.
+#
+# $1: test input file
+# $2:$: metadata options (either "-M size" or "--metadata_block_size=size")
+#
+# Algorithm:
+# Run it once without the metadata option ($2-$);
+# Save the result output file;
+# Run it second time with the metadata option;
+# Verify the output file of second run is larger than the one of 1st run.
+TOOLTEST_META()
+{
+ infile=$2
+ outfile=out-$1.$2
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+ # get the size of the first output file
+ size1=`wc -c $TESTDIR/$outfile | cut -d' ' -f1`
+
+ # 2nd run with metadata option
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@" $infile $outfile
+ )
+ RET=$?
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ DIFFTEST $infile $outfile
+ fi
+ # get the size of the second output file
+ size2=`wc -c $TESTDIR/$outfile | cut -d' ' -f1`
+
+ # verify sizes.
+ MESSAGE "Verify the sizes of both output files ($size1 vs $size2)"
+ if [ $size1 -lt $size2 ]; then
+ # pass
+ echo " PASSED"
+ else
+ #fail
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ fi
+
+ rm -f $outfile
+}
+
+# ADD_HELP_TEST
+TOOLTEST_HELP() {
+
+ expect="$TESTDIR/$1"
+ actual="$TESTDIR/`basename $1 .txt`.out"
+ actual_err="$TESTDIR/`basename $1 .txt`.err"
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $RUNSERIAL $H5REPACK_BIN "$@"
+ ) >$actual 2>$actual_err
+ cat $actual_err >> $actual
+
+ if [ ! -f $expect ]; then
+ # Create the expect data file if it doesn't yet exist.
+ echo " CREATED"
+ cp $actual $expect-CREATED
+ elif cmp -s $expect $actual; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected output (*.txt) differs from actual output (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ fi
+
+ # Clean up output file
+ if test -z "$HDF5_NOCLEANUP"; then
+ rm -f $actual $actual_err
+ fi
+
+}
+
+# This is different from $srcdir/../../../bin/output_filter.sh
+STDOUT_FILTER() {
+ result_file=$1
+ tmp_file=/tmp/h5test_tmp_$$
+ # Filter name of files.
+ cp $result_file $tmp_file
+ sed -e '/^Opening file/d' -e '/^Making file/d' \
+ < $tmp_file > $result_file
+ # cleanup
+ rm -f $tmp_file
+}
+
+#
+# The tests
+# We use the files generated by h5repacktst
+# Each run generates "<file>.out.h5" and the tool h5diff is used to
+# compare the input and output files
+#
+# the tests are the same as the program h5repacktst, but run from the CLI
+#
+
+# See which filters are usable (and skip tests for filters we
+# don't have). Do this by searching H5pubconf.h to see which
+# filters are defined.
+
+# detect whether the encoder is present.
+USE_FILTER_SZIP_ENCODER="no";
+if test $USE_FILTER_SZIP = "yes"; then
+USE_FILTER_SZIP_ENCODER=`$RUNSERIAL $H5DETECTSZIP_BIN`
+fi
+
+##############################################################################
+### T H E T E S T S
+##############################################################################
+# prepare for test
+COPY_TESTFILES_TO_TESTDIR
+
+TOOLTEST_HELP h5repack-help.txt -h
+
+# copy files (these files have no filters)
+TOOLTEST fill h5repack_fill.h5
+TOOLTEST objs h5repack_objs.h5
+TOOLTEST attr h5repack_attr.h5
+TOOLTEST hlink h5repack_hlink.h5
+TOOLTEST layout h5repack_layout.h5
+TOOLTEST early h5repack_early.h5
+
+# nested 8bit enum in both deflated and non-deflated datafiles
+if [ $USE_FILTER_DEFLATE != "yes" ]; then
+TOOLTEST nested_8bit_enum h5repack_nested_8bit_enum.h5
+else
+TOOLTEST nested_8bit_enum h5repack_nested_8bit_enum_deflated.h5
+fi
+
+# use h5repack_layout.h5 to write some filters (this file has no filters)
+
+# gzip with individual object
+arg="h5repack_layout.h5 -f dset1:GZIP=1 -l dset1:CHUNK=20x10"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST gzip_individual $arg
+fi
+
+# gzip for all
+arg="h5repack_layout.h5 -f GZIP=1"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST gzip_all $arg
+fi
+
+# szip with individual object
+arg="h5repack_layout.h5 -f dset2:SZIP=8,EC -l dset2:CHUNK=20x10"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST szip_individual $arg
+fi
+
+# szip for all
+arg="h5repack_layout.h5 -f SZIP=8,NN"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST szip_all $arg
+fi
+
+# shuffle with individual object
+arg="h5repack_layout.h5 -f dset2:SHUF -l dset2:CHUNK=20x10"
+TOOLTEST shuffle_individual $arg
+
+
+# shuffle for all
+arg="h5repack_layout.h5 -f SHUF"
+TOOLTEST shuffle_all $arg
+
+# fletcher32 with individual object
+arg="h5repack_layout.h5 -f dset2:FLET -l dset2:CHUNK=20x10"
+TOOLTEST fletcher_individual $arg
+
+# fletcher32 for all
+arg="h5repack_layout.h5 -f FLET"
+TOOLTEST fletcher_all $arg
+
+# all filters
+arg="h5repack_layout.h5 -f dset2:SHUF -f dset2:FLET -f dset2:SZIP=8,NN -f dset2:GZIP=1 -l dset2:CHUNK=20x10"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST all_filters $arg
+fi
+
+# verbose gzip with individual object
+arg="h5repack_filters.h5 -v -f /dset_deflate:GZIP=9"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ # compare output
+ TOOLTESTV gzip_verbose_filters $arg
+fi
+
+###########################################################
+# the following tests assume the input files have filters
+###########################################################
+
+# szip copy
+arg="h5repack_szip.h5"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST szip_copy $arg
+fi
+
+# szip remove
+arg="h5repack_szip.h5 --filter=dset_szip:NONE"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST szip_remove $arg
+fi
+
+# deflate copy
+arg="h5repack_deflate.h5"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST deflate_copy $arg
+fi
+
+# deflate remove
+arg="h5repack_deflate.h5 -f dset_deflate:NONE"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST deflate_remove $arg
+fi
+
+# shuffle copy
+arg="h5repack_shuffle.h5"
+TOOLTEST shuffle_copy $arg
+
+# shuffle remove
+arg="h5repack_shuffle.h5 -f dset_shuffle:NONE"
+TOOLTEST shuffle_remove $arg
+
+# fletcher32 copy
+arg="h5repack_fletcher.h5"
+TOOLTEST fletcher_copy $arg
+
+# fletcher32 remove
+arg="h5repack_fletcher.h5 -f dset_fletcher32:NONE"
+TOOLTEST fletcher_remove $arg
+
+# nbit copy
+arg="h5repack_nbit.h5"
+TOOLTEST nbit_copy $arg
+
+# nbit remove
+arg="h5repack_nbit.h5 -f dset_nbit:NONE"
+TOOLTEST nbit_remove $arg
+
+# nbit add
+arg="h5repack_nbit.h5 -f dset_int31:NBIT"
+TOOLTEST nbit_add $arg
+
+# scaleoffset copy
+arg="h5repack_soffset.h5"
+TOOLTEST scale_copy $arg
+
+# scaleoffset add
+arg="h5repack_soffset.h5 -f dset_none:SOFF=31,IN"
+TOOLTEST scale_add $arg
+
+# scaleoffset remove
+arg="h5repack_soffset.h5 -f dset_scaleoffset:NONE"
+TOOLTEST scale_remove $arg
+
+# remove all filters
+arg="h5repack_filters.h5 -f NONE"
+if test $USE_FILTER_DEFLATE != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST remove_all $arg
+fi
+
+#filter conversions
+
+arg="h5repack_deflate.h5 -f dset_deflate:SZIP=8,NN"
+if test $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_SZIP != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST deflate_convert $arg
+fi
+
+arg="h5repack_szip.h5 -f dset_szip:GZIP=1"
+if test $USE_FILTER_SZIP != "yes" -o $USE_FILTER_SZIP_ENCODER != "yes" -o $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST szip_convert $arg
+fi
+
+
+#limit
+arg="h5repack_layout.h5 -f GZIP=1 -m 1024"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST_DUMP deflate_limit $arg
+fi
+
+#file
+arg="h5repack_layout.h5 -e h5repack.info"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST deflate_file $arg
+fi
+
+#########################################################
+# layout options (these files have no filters)
+#########################################################
+VERIFY_LAYOUT_DSET dset2_chunk_20x10 h5repack_layout.h5 dset2 CHUNKED --layout dset2:CHUNK=20x10
+
+VERIFY_LAYOUT_ALL chunk_20x10 h5repack_layout.h5 CHUNKED -l CHUNK=20x10
+
+VERIFY_LAYOUT_DSET dset2_conti h5repack_layout.h5 dset2 CONTIGUOUS -l dset2:CONTI
+
+VERIFY_LAYOUT_ALL conti h5repack_layout.h5 CONTIGUOUS -l CONTI
+
+VERIFY_LAYOUT_DSET dset2_compa h5repack_layout.h5 dset2 COMPACT -l dset2:COMPA
+
+VERIFY_LAYOUT_ALL compa h5repack_layout.h5 COMPACT -l COMPA
+
+TOOLTESTM dset2_chunk_20x10-errstk h5repack_layout.h5 --layout=dset2:CHUNK=20x10x5 --enable-error-stack
+
+################################################################
+# layout conversions (file has no filters)
+###############################################################
+
+VERIFY_LAYOUT_DSET dset_compa_conti h5repack_layout.h5 dset_compact CONTIGUOUS -l dset_compact:CONTI
+
+VERIFY_LAYOUT_DSET dset_compa_chunk h5repack_layout.h5 dset_compact CHUNKED -l dset_compact:CHUNK=2x5
+
+VERIFY_LAYOUT_DSET dset_compa_compa h5repack_layout.h5 dset_compact COMPACT -l dset_compact:COMPA
+
+VERIFY_LAYOUT_DSET dset_conti_compa h5repack_layout.h5 dset_contiguous COMPACT -l dset_contiguous:COMPA
+
+VERIFY_LAYOUT_DSET dset_conti_chunk h5repack_layout.h5 dset_contiguous CHUNKED -l dset_contiguous:CHUNK=3x6
+
+VERIFY_LAYOUT_DSET dset_conti_conti h5repack_layout.h5 dset_contiguous CONTIGUOUS -l dset_contiguous:CONTI
+
+VERIFY_LAYOUT_DSET chunk_compa h5repack_layout.h5 dset_chunk COMPACT -l dset_chunk:COMPA
+
+VERIFY_LAYOUT_DSET chunk_conti h5repack_layout.h5 dset_chunk CONTIGUOUS -l dset_chunk:CONTI
+
+VERIFY_LAYOUT_DSET chunk_18x13 h5repack_layout.h5 dset_chunk CHUNKED -l dset_chunk:CHUNK=18x13
+
+# test convert small size dataset ( < 1k) to compact layout without -m
+VERIFY_LAYOUT_DSET contig_small_compa h5repack_layout2.h5 contig_small COMPACT -l contig_small:COMPA
+
+VERIFY_LAYOUT_DSET contig_small_fixed_compa h5repack_layout2.h5 chunked_small_fixed COMPACT -l chunked_small_fixed:COMPA
+
+#---------------------------------------------------------------------------
+# Test file contains chunked datasets (need multiple dsets) with
+# unlimited max dims. (HDFFV-7933)
+# Use first dset to test.
+#---------------------------------------------------------------------------
+# chunk to chunk - specify chunk dim bigger than any current dim
+VERIFY_LAYOUT_DSET chunk2chunk h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:CHUNK=100x300
+
+# chunk to contiguous
+VERIFY_LAYOUT_DSET chunk2conti h5repack_layout3.h5 chunk_unlimit1 CONTI -l chunk_unlimit1:CONTI
+
+# chunk to compact - convert big dataset (should be > 64k) for this purpose,
+# should remain as original layout (chunk)
+VERIFY_LAYOUT_DSET chunk2compa h5repack_layout3.h5 chunk_unlimit1 CHUNK -l chunk_unlimit1:COMPA
+
+#--------------------------------------------------------------------------
+# Test -f for some specific cases. Chunked dataset with unlimited max dims.
+# (HDFFV-8012)
+#--------------------------------------------------------------------------
+# - should not fail
+# - should not change max dims from unlimit
+
+# chunk dim is bigger than dataset dim. ( dset size < 64k )
+VERIFY_LAYOUT_DSET error1 h5repack_layout3.h5 chunk_unlimit1 H5S_UNLIMITED -f chunk_unlimit1:NONE
+# chunk dim is bigger than dataset dim. ( dset size > 64k )
+VERIFY_LAYOUT_DSET error2 h5repack_layout3.h5 chunk_unlimit2 H5S_UNLIMITED -f chunk_unlimit2:NONE
+
+# chunk dims are smaller than dataset dims. ( dset size < 64k )
+#TOOLTEST_MAIN h5repack_layout3.h5 -f chunk_unlimit3:NONE
+VERIFY_LAYOUT_DSET error3 h5repack_layout3.h5 chunk_unlimit3 H5S_UNLIMITED -f chunk_unlimit3:NONE
+
+# file input - should not fail
+TOOLTEST error4 h5repack_layout3.h5 -f NONE
+
+#--------------------------------------------------------------------------
+# Test base: Convert CHUNK to CONTI for a chunked dataset with small dataset
+# (dset size < 64K) and with unlimited max dims on a condition as follow.
+# (HDFFV-8214)
+#--------------------------------------------------------------------------
+
+# chunk dim is bigger than dataset dim. should succeed.
+VERIFY_LAYOUT_DSET ckdim_biger h5repack_layout3.h5 chunk_unlimit2 CONTI -l chunk_unlimit2:CONTI
+# chunk dim is smaller than dataset dim. should succeed.
+VERIFY_LAYOUT_DSET ckdim_smaller h5repack_layout3.h5 chunk_unlimit3 CONTI -l chunk_unlimit3:CONTI
+
+
+# Native option
+# Do not use FILE1, as the named dtype will be converted to native, and h5diff will
+# report a difference.
+TOOLTEST native_fill h5repack_fill.h5 -n
+TOOLTEST native_attr h5repack_attr.h5 -n
+
+
+# latest file format with long switches. use FILE4=h5repack_layout.h5 (no filters)
+arg="h5repack_layout.h5 --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype]"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ VERIFY_LAYOUT_ALL layout_long_switches h5repack_layout.h5 CHUNKED --layout CHUNK=20x10 --filter GZIP=1 --minimum=10 --native --latest --compact=8 --indexed=6 --ssize=8[:dtype]
+fi
+
+# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
+arg="h5repack_layout.h5 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ VERIFY_LAYOUT_ALL layout_short_switches h5repack_layout.h5 CHUNKED -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]
+fi
+
+# several global filters
+
+arg="h5repack_layout.h5 --filter GZIP=1 --filter SHUF"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST global_filters $arg
+fi
+
+# syntax of -i infile -o outfile
+# latest file format with short switches. use FILE4=h5repack_layout.h5 (no filters)
+arg="h5repack_layout.h5 -l CHUNK=20x10 -f GZIP=1 -m 10 -n -L -c 8 -d 6 -s 8[:dtype]"
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP $arg
+else
+ TOOLTEST0 old_style_layout_short_switches $arg
+fi
+
+# add a userblock to file
+arg="h5repack_objs.h5 -u ublock.bin -b 2048"
+TOOLTEST add_userblock $arg
+
+# add alignment
+arg="h5repack_objs.h5 -t 1 -a 1 "
+TOOLTEST add_alignment $arg
+
+# Check repacking file with old version of layout message (should get upgraded
+# to new version and be readable, etc.)
+TOOLTEST upgrade_layout h5repack_layouto.h5
+
+# test for datum size > H5TOOLS_MALLOCSIZE
+TOOLTEST gt_mallocsize h5repack_objs.h5 -f GZIP=1
+
+# Check repacking file with committed datatypes in odd configurations
+TOOLTEST committed_dt h5repack_named_dtypes.h5
+
+# tests family driver (file is located in common testfiles folder, uses TOOLTEST1
+TOOLTEST1 family tfamily%05d.h5
+
+# test various references (bug 1814 and 1726)
+TOOLTEST bug1814 h5repack_refs.h5
+
+# test attribute with various references (bug1797 / HDFFV-5932)
+# the references in attribute of compund or vlen datatype
+TOOLTEST HDFFV-5932 h5repack_attr_refs.h5
+
+# Add test for memory leak in attirbute. This test is verified by CTEST.
+# 1. leak from vlen string
+# 2. leak from compound type without reference member
+# (HDFFV-7840, )
+# Note: this test is experimental for sharing test file among tools
+TOOLTEST HDFFV-7840 h5diff_attr1.h5
+
+# tests for metadata block size option
+TOOLTEST_META meta_short h5repack_layout.h5 -M 8192
+TOOLTEST_META meta_long h5repack_layout.h5 --metadata_block_size=8192
+
+# VDS tests
+
+################################################################
+# layout conversions
+###############################################################
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP vds_dset_chunk_20x10x5
+else
+ VERIFY_LAYOUT_VDS vds_dset_chunk_20x10x5 1_vds.h5 vds_dset CHUNKED --layout vds_dset:CHUNK=20x10x5
+fi
+
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP vds_chunk2x5x8
+else
+ VERIFY_LAYOUT_VDS vds_chunk2x5x8 3_1_vds.h5 vds_dset CHUNKED -l vds_dset:CHUNK=2x5x8
+fi
+
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP vds_chunk3x6x9
+else
+ VERIFY_LAYOUT_VDS vds_chunk3x6x9 2_vds.h5 vds_dset CHUNKED -l vds_dset:CHUNK=3x6x9
+fi
+
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP vds_compa 4_vds.h5
+else
+ VERIFY_LAYOUT_VDS vds_compa 4_vds.h5 vds_dset COMPACT -l vds_dset:COMPA
+fi
+
+if test $USE_FILTER_DEFLATE != "yes" ; then
+ SKIP vds_conti 4_vds.h5
+else
+ VERIFY_LAYOUT_VDS vds_conti 4_vds.h5 vds_dset CONTIGUOUS -l vds_dset:CONTI
+fi
+
+# Clean up temporary files/directories
+CLEAN_TESTFILES_AND_TESTDIR
+
+if test $nerrors -eq 0 ; then
+ echo "All $TESTNAME tests passed."
+ exit $EXIT_SUCCESS
+else
+ echo "$TESTNAME tests failed with $nerrors errors."
+ exit $EXIT_FAILURE
+fi
+
diff --git a/tools/test/h5repack/h5repack_plugin.sh.in b/tools/test/h5repack/h5repack_plugin.sh.in
new file mode 100644
index 0000000..c7a9a6b
--- /dev/null
+++ b/tools/test/h5repack/h5repack_plugin.sh.in
@@ -0,0 +1,275 @@
+#! /bin/sh
+#
+# Copyright by The HDF Group.
+# All rights reserved.
+#
+# This file is part of HDF5. The full HDF5 copyright notice, including
+# terms governing use, modification, and redistribution, is contained in
+# the files COPYING and Copyright.html. COPYING can be found at the root
+# of the source code distribution tree; Copyright.html can be found at the
+# root level of an installed copy of the electronic document set and is
+# linked from the top-level documents page. It can also be found at
+# http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have access
+# to either file, you may request a copy from help@hdfgroup.org.
+#
+srcdir=@srcdir@
+TOP_BUILDDIR=@top_builddir@
+
+# Determine backward compatibility options enabled
+DEPRECATED_SYMBOLS="@DEPRECATED_SYMBOLS@"
+
+EXIT_SUCCESS=0
+EXIT_FAILURE=1
+
+H5REPACK=../../src/h5repack/h5repack # The tool name
+H5REPACK_BIN=`pwd`/$H5REPACK # The path of the tool binary
+
+H5DUMP=../../src/h5dump/h5dump # The h5dump tool name
+H5DUMP_BIN=`pwd`/$H5DUMP # The path of the h5dump tool binary
+
+nerrors=0
+verbose=yes
+exit_code=$EXIT_SUCCESS
+
+TEST_NAME=ud_plugin
+FROM_DIR=`pwd`/.libs
+PLUGIN_LIB="$FROM_DIR/libdynlibadd.*"
+PLUGIN_LIB2="$FROM_DIR/libdynlibvers.*"
+PLUGIN_LIBDIR=testdir3
+RM='rm -rf'
+
+GREP='grep'
+CP='cp'
+DIRNAME='dirname'
+LS='ls'
+AWK='awk'
+
+# source dirs
+SRC_TOOLS="$srcdir/../.."
+
+# testfiles source dirs for tools
+SRC_H5REPACK_TESTFILES="$SRC_TOOLS/test/h5repack/testfiles"
+
+TESTDIR=testplug
+test -d $TESTDIR || mkdir $TESTDIR
+
+######################################################################
+# test files
+# --------------------------------------------------------------------
+# All the test files copy from source directory to test directory
+# NOTE: Keep this framework to add/remove test files.
+# Any test files from other tools can be used in this framework.
+# This list are also used for checking exist.
+# Comment '#' without space can be used.
+# --------------------------------------------------------------------
+LIST_HDF5_TEST_FILES="
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_test.ddl
+$SRC_H5REPACK_TESTFILES/plugin_test.h5repack_layout.h5.tst
+$SRC_H5REPACK_TESTFILES/h5repack_layout.h5-plugin_version_test.ddl
+$SRC_H5REPACK_TESTFILES/plugin_version_test.h5repack_layout.h5.tst
+"
+#$SRC_H5REPACK_TESTFILES/h5repack_layout.UD.h5
+#$SRC_H5REPACK_TESTFILES/h5repack_layout.UD.h5-plugin_none.ddl
+#$SRC_H5REPACK_TESTFILES/plugin_none.h5repack_layout.UD.h5.tst
+#"
+
+#
+# copy test files and expected output files from source dirs to test dir
+#
+COPY_TESTFILES="$LIST_HDF5_TEST_FILES"
+
+# Main Body
+# Create test directories if not exists yet.
+test -d $PLUGIN_LIBDIR || mkdir -p $PLUGIN_LIBDIR
+if [ $? != 0 ]; then
+ echo "Failed to create test directory($PLUGIN_LIBDIR)"
+ exit $EXIT_FAILURE
+fi
+
+# copy plugin library for test
+$CP $PLUGIN_LIB $PLUGIN_LIBDIR
+if [ $? != 0 ]; then
+ echo "Failed to copy plugin library ($PLUGIN_LIB) for test."
+ exit $EXIT_FAILURE
+fi
+$CP $PLUGIN_LIB2 $PLUGIN_LIBDIR
+if [ $? != 0 ]; then
+ echo "Failed to copy plugin library ($PLUGIN_LIB2) for test."
+ exit $EXIT_FAILURE
+fi
+
+# setup plugin path
+ENVCMD="env HDF5_PLUGIN_PATH=../${PLUGIN_LIBDIR}"
+
+COPY_TESTFILES_TO_TESTDIR()
+{
+ # copy test files. Used -f to make sure get a new copy
+ for tstfile in $COPY_TESTFILES
+ do
+ # ignore '#' comment
+ echo $tstfile | tr -d ' ' | grep '^#' > /dev/null
+ RET=$?
+ if [ $RET -eq 1 ]; then
+ # skip cp if srcdir is same as destdir
+ # this occurs when build/test performed in source dir and
+ # make cp fail
+ SDIR=`$DIRNAME $tstfile`
+ INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
+ INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
+ if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
+ $CP -f $tstfile $TESTDIR
+ if [ $? -ne 0 ]; then
+ echo "Error: FAILED to copy $tstfile ."
+
+ # Comment out this to CREATE expected file
+ exit $EXIT_FAILURE
+ fi
+ fi
+ fi
+ done
+}
+
+CLEAN_TESTFILES_AND_TESTDIR()
+{
+ # skip rm if srcdir is same as destdir
+ # this occurs when build/test performed in source dir and
+ # make cp fail
+ SDIR=$SRC_H5REPACK_TESTFILES
+ INODE_SDIR=`$LS -i -d $SDIR | $AWK -F' ' '{print $1}'`
+ INODE_DDIR=`$LS -i -d $TESTDIR | $AWK -F' ' '{print $1}'`
+ if [ "$INODE_SDIR" != "$INODE_DDIR" ]; then
+ $RM $TESTDIR
+ fi
+}
+
+# Print a $* message left justified in a field of 70 characters
+#
+MESSAGE() {
+ SPACES=" "
+ echo "$* $SPACES" | cut -c1-70 | tr -d '\012'
+}
+
+# Print a line-line message left justified in a field of 70 characters
+# beginning with the word "Testing".
+#
+TESTING() {
+ SPACES=" "
+ echo "Testing $* $SPACES" | cut -c1-70 | tr -d '\012'
+}
+
+# Print a line-line message left justified in a field of 70 characters
+# beginning with the word "Verifying".
+#
+VERIFY() {
+ MESSAGE "Verifying $*"
+}
+
+# This is different from $srcdir/../../../bin/output_filter.sh
+STDOUT_FILTER() {
+ result_file=$1
+ tmp_file=/tmp/h5test_tmp_$$
+ # Filter name of files.
+ cp $result_file $tmp_file
+ sed -e '/^Opening file/d' -e '/^Making file/d' \
+ < $tmp_file > $result_file
+ # cleanup
+ rm -f $tmp_file
+}
+
+# This runs h5repack comparing output with h5dump output
+# from -pH option
+#
+TOOLTEST_DUMP()
+{
+ echo $@
+ infile=$2
+ outfile=out-$1.$2
+ expect1="$TESTDIR/$1.$2.tst"
+ actual1="$TESTDIR/$1.$2.out"
+ actual1_err="$TESTDIR/$1.$2.err"
+ expect2="$TESTDIR/$2-$1.ddl"
+ actual2="$TESTDIR/$2-$1.out"
+ actual2_err="$TESTDIR/$2-$1.err"
+
+ shift
+ shift
+
+ # Run test.
+ TESTING $H5REPACK $@
+ (
+ cd $TESTDIR
+ $ENVCMD $H5REPACK_BIN "$@" $infile $outfile
+ ) >$actual1 2>$actual1_err
+ RET=$?
+ STDOUT_FILTER $actual1
+ cat $actual1_err >> $actual1
+ if [ $RET != 0 ] ; then
+ echo "*FAILED*"
+ nerrors="`expr $nerrors + 1`"
+ else
+ echo " PASSED"
+ if cmp -s $expect1 $actual1; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.tst) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && diff -c $expect1 $actual1 |sed 's/^/ /'
+ fi
+ VERIFY h5dump output -pH $outfile
+ (
+ cd $TESTDIR
+ $ENVCMD $H5DUMP_BIN -pH $outfile
+ ) >$actual2 2>$actual2_err
+ RET=$?
+ cat $actual2_err >> $actual2
+
+ if cmp -s $expect2 $actual2; then
+ echo " PASSED"
+ else
+ echo "*FAILED*"
+ echo " Expected result (*.ddl) differs from actual result (*.out)"
+ nerrors="`expr $nerrors + 1`"
+ test yes = "$verbose" && diff -c $expect2 $actual2 |sed 's/^/ /'
+ fi
+
+ fi
+
+
+ rm -f $actual1 $actual1_err $actual2 $actual2_err
+ rm -f $outfile
+}
+
+##############################################################################
+### T H E T E S T S
+##############################################################################
+# prepare for test
+COPY_TESTFILES_TO_TESTDIR
+
+# Run the test
+arg="h5repack_layout.h5 -v -f UD=260,4,9,1,9,235"
+TOOLTEST_DUMP plugin_version_test $arg
+
+arg="h5repack_layout.h5 -v -f UD=257,1,9"
+TOOLTEST_DUMP plugin_test $arg
+
+#arg="h5repack_layout.UD.h5 -v -f NONE"
+#TOOLTEST_DUMP plugin_none $arg
+
+# print results
+if test $nerrors -ne 0 ; then
+ echo "$nerrors errors encountered"
+ exit_code=$EXIT_FAILURE
+else
+ echo "All Plugin API tests passed."
+ exit_code=$EXIT_SUCCESS
+fi
+
+# Clean up temporary files/directories
+CLEAN_TESTFILES_AND_TESTDIR
+
+# Clean up temporary files/directories and leave
+$RM $PLUGIN_LIBDIR
+
+exit $exit_code
diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c
new file mode 100644
index 0000000..82b45fc
--- /dev/null
+++ b/tools/test/h5repack/h5repacktst.c
@@ -0,0 +1,6856 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+* Copyright by The HDF Group. *
+* Copyright by the Board of Trustees of the University of Illinois. *
+* All rights reserved. *
+* *
+* This file is part of HDF5. The full HDF5 copyright notice, including *
+* terms governing use, modification, and redistribution, is contained in *
+* the files COPYING and Copyright.html. COPYING can be found at the root *
+* of the source code distribution tree; Copyright.html can be found at the *
+* root level of an installed copy of the electronic HDF5 document set and *
+* is linked from the top-level documents page. It can also be found at *
+* http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+* access to either file, you may request a copy from help@hdfgroup.org. *
+* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+#include "h5repack.h"
+#include "h5test.h"
+#include "h5diff.h"
+#include "h5tools.h"
+#include "h5tools_utils.h"
+
+#define GOERROR {H5_FAILED(); goto error;}
+
+
+/* fill value test */
+#define FNAME0 "h5repack_fill.h5"
+#define FNAME0OUT "h5repack_fill_out.h5"
+/* HDF5 objects and all dataset datatypes */
+#define FNAME1 "h5repack_objs.h5"
+#define FNAME1OUT "h5repack_objs_out.h5"
+/* attributes, all datatypes */
+#define FNAME2 "h5repack_attr.h5"
+#define FNAME2OUT "h5repack_attr_out.h5"
+/* hard links */
+#define FNAME3 "h5repack_hlink.h5"
+#define FNAME3OUT "h5repack_hlink_out.h5"
+/* layout */
+#define FNAME4 "h5repack_layout.h5"
+#define FNAME4OUT "h5repack_layout_out.h5"
+/* H5D_ALLOC_TIME_EARLY */
+#define FNAME5 "h5repack_early.h5"
+#define FNAME5OUT "h5repack_early_out.h5"
+#define FNAME6 "h5repack_early2.h5"
+#ifdef H5_HAVE_FILTER_SZIP
+/* SZIP filter */
+#define FNAME7 "h5repack_szip.h5"
+#define FNAME7OUT "h5repack_szip_out.h5"
+#endif
+/* GZIP filter */
+#define FNAME8 "h5repack_deflate.h5"
+#define FNAME8OUT "h5repack_deflate_out.h5"
+/* GZIP filter */
+#define FNAME9 "h5repack_shuffle.h5"
+#define FNAME9OUT "h5repack_shuffle_out.h5"
+/* Fletcher filter */
+#define FNAME10 "h5repack_fletcher.h5"
+#define FNAME10OUT "h5repack_fletcher_out.h5"
+/* All filters */
+#define FNAME11 "h5repack_filters.h5"
+#define FNAME11OUT "h5repack_filters_out.h5"
+/* NBit filter */
+#define FNAME12 "h5repack_nbit.h5"
+#define FNAME12OUT "h5repack_nbit_out.h5"
+/* Scale Offset filter */
+#define FNAME13 "h5repack_soffset.h5"
+#define FNAME13OUT "h5repack_soffset_out.h5"
+/* Big file to test read by hyperslabs */
+#define FNAME14 "h5repack_big.h5"
+#define FNAME14OUT "h5repack_big_out.h5"
+/* external file */
+#define FNAME15 "h5repack_ext.h5"
+#define FNAME15OUT "h5repack_ext_out.h5"
+/* File w/userblock */
+#define FNAME16 "h5repack_ub.h5"
+#define FNAME16OUT "h5repack_ub_out.h5"
+/* Named datatypes */
+#define FNAME17 "h5repack_named_dtypes.h5"
+#define FNAME17OUT "h5repack_named_dtypes_out.h5"
+
+#define FNAME18 "h5repack_layout2.h5"
+
+#define FNAME_UB "ublock.bin"
+
+/* obj and region references */
+#define FNAME_REF "h5repack_refs.h5"
+
+/* obj and region references in attr of compound and vlen type */
+#define FNAME_ATTR_REF "h5repack_attr_refs.h5"
+
+const char *H5REPACK_FILENAMES[] = {
+ "h5repack_big_out",
+ NULL
+};
+
+#define H5REPACK_EXTFILE "h5repack_ext.bin"
+
+/* Name of tool */
+#define PROGRAMNAME "h5repacktst"
+
+
+#define DIM1 40
+#define DIM2 20
+#define CDIM1 DIM1/2
+#define CDIM2 DIM2/2
+#define RANK 2
+
+/* Size of userblock (for userblock test) */
+#define USERBLOCK_SIZE 2048
+
+/* obj and region references */
+#define NAME_OBJ_DS1 "Dset1"
+#define NAME_OBJ_GRP "Group"
+#define NAME_OBJ_NDTYPE "NamedDatatype"
+#define NAME_OBJ_DS2 "Dset2"
+#define REG_REF_DS1 "Dset_REGREF"
+
+/*-------------------------------------------------------------------------
+* prototypes
+*-------------------------------------------------------------------------
+*/
+static int make_all_objects(hid_t loc_id);
+static int make_attributes(hid_t loc_id);
+static int make_hlinks(hid_t loc_id);
+static int make_early(void);
+static int make_layout(hid_t loc_id);
+static int make_layout2(hid_t loc_id);
+static int make_layout3(hid_t loc_id);
+#ifdef H5_HAVE_FILTER_SZIP
+static int make_szip(hid_t loc_id);
+#endif /* H5_HAVE_FILTER_SZIP */
+static int make_deflate(hid_t loc_id);
+static int make_shuffle(hid_t loc_id);
+static int make_fletcher32(hid_t loc_id);
+static int make_nbit(hid_t loc_id);
+static int make_scaleoffset(hid_t loc_id);
+static int make_all_filters(hid_t loc_id);
+static int make_fill(hid_t loc_id);
+static int make_big(hid_t loc_id);
+static int make_testfiles(void);
+static int write_dset_in(hid_t loc_id,const char* dset_name,hid_t file_id,int make_diffs );
+static int write_attr_in(hid_t loc_id,const char* dset_name,hid_t fid,int make_diffs );
+static int write_dset(hid_t loc_id,int rank,hsize_t *dims,const char *dset_name,hid_t tid,void *buf );
+static int make_dset(hid_t loc_id,const char *name,hid_t sid,hid_t dcpl,void *buf);
+static int make_attr(hid_t loc_id,int rank,hsize_t *dims,const char *attr_name,hid_t tid,void *buf);
+static int make_dset_reg_ref(hid_t loc_id);
+static int make_external(hid_t loc_id);
+static int make_userblock(void);
+static int verify_userblock( const char* filename);
+static int make_userblock_file(void);
+static int make_named_dtype(hid_t loc_id);
+static int make_references(hid_t loc_id);
+static int make_complex_attr_references(hid_t loc_id);
+
+
+/*-------------------------------------------------------------------------
+* Function: main
+*
+* Purpose: Executes h5repack tests
+*
+* Return: Success: zero
+* Failure: 1
+*
+* Programmer: Pedro Vicente <pvn@ncsa.uiuc.edu>
+* January, 6, 2004
+*
+*-------------------------------------------------------------------------
+*/
+
+int main (void)
+{
+ pack_opt_t pack_options;
+ diff_opt_t diff_options;
+ hsize_t fs_size = 0; /* free space section threshold */
+ H5F_file_space_type_t fs_type = H5F_FILE_SPACE_DEFAULT; /* file space handling strategy */
+ h5_stat_t file_stat;
+ h5_stat_size_t fsize1, fsize2; /* file sizes */
+#if defined (H5_HAVE_FILTER_SZIP)
+ int szip_can_encode = 0;
+#endif
+
+ h5tools_setprogname(PROGRAMNAME);
+ h5tools_setstatus(EXIT_SUCCESS);
+
+ /* Initialize h5tools lib */
+ h5tools_init();
+
+ /* initialize */
+ HDmemset(&diff_options, 0, sizeof (diff_opt_t));
+ HDmemset(&pack_options, 0, sizeof (pack_opt_t));
+
+ /* run tests */
+ puts("Testing h5repack:");
+
+ /* make the test files */
+ TESTING(" generating datasets");
+ if (make_testfiles() < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * Format of the tests:
+ *
+ * 1) make a copy of the file with h5repack
+ * 2) use the h5diff function to compare the input and output file
+ *-------------------------------------------------------------------------
+ */
+
+
+ /*-------------------------------------------------------------------------
+ * file with fill values
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" copy of datasets (fill values)");
+
+ /* fs_type = 0; fs_size = 0 */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME0,FNAME0OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME0,FNAME0OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME0, FNAME0OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_cmp_pl(FNAME0,FNAME0OUT)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * file with all kinds of dataset datatypes
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" copy of datasets (all datatypes)");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME1,FNAME1OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME1,FNAME1OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME1, FNAME1OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_cmp_pl(FNAME1,FNAME1OUT)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * file with attributes
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" copy of datasets (attributes)");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME2,FNAME2OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME2,FNAME2OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME2, FNAME2OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_cmp_pl(FNAME2,FNAME2OUT)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * file with hardlinks
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" copy of datasets (hardlinks)");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME3,FNAME3OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME3,FNAME3OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME3, FNAME3OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_cmp_pl(FNAME3,FNAME3OUT)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * alloc early test
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" copy of allocation early file");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME5,FNAME5OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME5,FNAME5OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME5, FNAME5OUT, &pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * the remaining files differ in the dcpl's
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * deflate
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" adding deflate filter (old_format)");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:GZIP=9",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT, &pack_options) <= 0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+ TESTING(" adding deflate filter (new format)");
+#ifdef H5_HAVE_FILTER_DEFLATE
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ * For new format, "dset1" should be using Fixed Array indexing
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, TRUE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:GZIP=9",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT, &pack_options) <= 0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" adding deflate filter to all");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("GZIP=1",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+ /*-------------------------------------------------------------------------
+ * SZIP
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" adding szip filter");
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (h5tools_can_encode(H5Z_FILTER_SZIP) >0) {
+ szip_can_encode = 1;
+ }
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (szip_can_encode) {
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset2:SZIP=8,EC",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset2:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" adding szip filter to all");
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (szip_can_encode) {
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("SZIP=8,NN",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+
+ TESTING(" addding shuffle filter");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:SHUF",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" addding shuffle filter to all");
+
+ /* fs_type = H5F_FILE_SPACE_ALL_PERSIST; fs_size = 1 */
+ if (h5repack_init (&pack_options, 0, FALSE, H5_INC_ENUM(H5F_file_space_type_t, fs_type), ++fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("SHUF",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" adding checksum filter");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:FLET",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+
+
+ TESTING(" adding checksum filter to all");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("FLET",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" filter queue fletcher, shuffle, deflate, szip");
+
+ /*-------------------------------------------------------------------------
+ * add some filters
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK 20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:FLET",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset1:SHUF",&pack_options) < 0)
+ GOERROR;
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (szip_can_encode) {
+ if (h5repack_addfilter("dset1:SZIP=8,NN",&pack_options) < 0)
+ GOERROR;
+ }
+#endif
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+ if (h5repack_addfilter("dset1:GZIP=1",&pack_options) < 0)
+ GOERROR;
+#endif
+
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" adding layout chunked (old format)");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT, &pack_options )<= 0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" adding layout chunked (new format)");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ * For new format, "dset1" should be using Fixed Array indexing
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, TRUE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT, &pack_options )<= 0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" adding layout chunked to all");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CHUNK=20x10",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ TESTING(" adding layout contiguous");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ TESTING(" adding layout contiguous to all");
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ /*-------------------------------------------------------------------------
+ * do the same test for a file with filters (chunked)
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME8,FNAME8OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME8,FNAME8OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME8, FNAME8OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+ TESTING(" adding layout compact");
+
+ /*-------------------------------------------------------------------------
+ * test an individual object option
+ *-------------------------------------------------------------------------
+ */
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset1:COMPA",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" adding layout compact to all");
+
+ /*-------------------------------------------------------------------------
+ * test all objects option
+ *-------------------------------------------------------------------------
+ */
+
+ /* fs_type = H5F_FILE_SPACE_ALL; fs_size = 2 */
+ if (h5repack_init (&pack_options, 0, FALSE, H5_INC_ENUM(H5F_file_space_type_t, fs_type), ++fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("COMPA",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" layout compact to contiguous conversion");
+
+ /*-------------------------------------------------------------------------
+ * layout compact to contiguous conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_compact:CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout compact to chunk conversion");
+
+ /*-------------------------------------------------------------------------
+ * layout compact to chunk conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_compact:CHUNK=2x5",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout compact to compact conversion");
+
+ /*-------------------------------------------------------------------------
+ * layout compact to compact conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_compact:COMPA",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout contiguous to compact conversion");
+ /*-------------------------------------------------------------------------
+ * layout contiguous to compact conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_contiguous:COMPA",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout contiguous to chunk conversion");
+ /*-------------------------------------------------------------------------
+ * layout contiguous to chunk conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_contiguous:CHUNK=3x6",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout contiguous to contiguous conversion");
+
+ /*-------------------------------------------------------------------------
+ * layout contiguous to contiguous conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_contiguous:CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout chunked to compact conversion");
+ /*-------------------------------------------------------------------------
+ * layout chunked to compact conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_chunk:COMPA",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout chunked to contiguous conversion");
+
+ /*-------------------------------------------------------------------------
+ * layout chunked to contiguous conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_chunk:CONTI",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ TESTING(" layout chunked to chunk conversion");
+ /*-------------------------------------------------------------------------
+ * layout chunked to chunked conversion
+ *-------------------------------------------------------------------------
+ */
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addlayout("dset_chunk:CHUNK=18x13",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME4,FNAME4OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME4,FNAME4OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME4, FNAME4OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * the following tests assume the input files have filters
+ * FNAME7
+ * FNAME8
+ * FNAME9
+ * FNAME10
+ * FNAME11
+ *-------------------------------------------------------------------------
+ */
+
+
+ TESTING(" copy of szip filter");
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (szip_can_encode) {
+ /* fs_type = H5F_FILE_SPACE_AGGR_VFD; fs_size = 3 */
+ if (h5repack_init (&pack_options, 0, FALSE, H5_INC_ENUM(H5F_file_space_type_t, fs_type), ++fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME7,FNAME7OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME7,FNAME7OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME7, FNAME7OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_cmp_pl(FNAME7,FNAME7OUT)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+ TESTING(" removing szip filter");
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (szip_can_encode) {
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_szip:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME7,FNAME7OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME7,FNAME7OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME7, FNAME7OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+
+ TESTING(" copy of deflate filter");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME8,FNAME8OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME8,FNAME8OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME8, FNAME8OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+
+ TESTING(" removing deflate filter");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, ++fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_deflate:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME8,FNAME8OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME8,FNAME8OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME8, FNAME8OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+
+
+ TESTING(" copy of shuffle filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME9,FNAME9OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME9,FNAME9OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME9, FNAME9OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" removing shuffle filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_shuffle:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME9,FNAME9OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME9,FNAME9OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME9, FNAME9OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" copy of fletcher filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME10,FNAME10OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME10,FNAME10OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME10, FNAME10OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" removing fletcher filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_fletcher32:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME10,FNAME10OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME10,FNAME10OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME10, FNAME10OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" copy of nbit filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME12,FNAME12OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME12,FNAME12OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME12, FNAME12OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" removing nbit filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_nbit:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME12,FNAME12OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME12,FNAME12OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME12, FNAME12OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" adding nbit filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_int31:NBIT",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME12,FNAME12OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME12,FNAME12OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME12, FNAME12OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" copy of scaleoffset filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME13,FNAME13OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME13,FNAME13OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME13, FNAME13OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" removing scaleoffset filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_scaleoffset:NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME13,FNAME13OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME13,FNAME13OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME13, FNAME13OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ TESTING(" adding scaleoffset filter");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_none:SOFF=31,IN",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME13,FNAME13OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME13,FNAME13OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME13, FNAME13OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * file with all filters
+ * dset_all
+ * dset_deflate
+ * dset_szip
+ * dset_shuffle
+ * dset_fletcher32
+ *-------------------------------------------------------------------------
+ */
+
+
+ TESTING(" filter conversion from deflate to szip");
+
+#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE)
+
+ if (szip_can_encode) {
+ /* fs_type = H5F_FILE_SPACE_VFD; fs_size = 4 */
+ if (h5repack_init (&pack_options, 0, FALSE, H5_INC_ENUM(H5F_file_space_type_t, fs_type), ++fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_deflate:SZIP=8,NN",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME11,FNAME11OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME11,FNAME11OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME11, FNAME11OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+ TESTING(" filter conversion from szip to deflate");
+
+#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE)
+
+ if (szip_can_encode) {
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("dset_szip:GZIP=1",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME11,FNAME11OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME11,FNAME11OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME11, FNAME11OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+ } else {
+ SKIPPED();
+ }
+#else
+ SKIPPED();
+#endif
+
+
+ /*-------------------------------------------------------------------------
+ * test the NONE global option
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" removing all filters");
+
+#if defined (H5_HAVE_FILTER_SZIP) && defined (H5_HAVE_FILTER_DEFLATE)
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("NONE",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME11,FNAME11OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME11,FNAME11OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME11, FNAME11OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+ /*-------------------------------------------------------------------------
+ * test a big file
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" big file");
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME14,FNAME14OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME14,FNAME14OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME14, FNAME14OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test external dataset
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" external datasets");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack(FNAME15,FNAME15OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME15,FNAME15OUT,NULL,NULL,&diff_options) > 0)
+ GOERROR;
+ if (h5repack_verify(FNAME15, FNAME15OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test file with userblock
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" file with userblock");
+ if(h5repack_init(&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if(h5repack(FNAME16, FNAME16OUT, &pack_options) < 0)
+ GOERROR;
+ if(h5diff(FNAME16, FNAME16OUT, NULL, NULL, &diff_options) > 0)
+ GOERROR;
+ if(h5repack_verify(FNAME16, FNAME16OUT, &pack_options) <= 0)
+ GOERROR;
+ if(verify_userblock(FNAME16OUT) < 0)
+ GOERROR;
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test --latest options
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" latest file format options");
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ pack_options.latest=1;
+ pack_options.grp_compact=10;
+ pack_options.grp_indexed=5;
+ pack_options.msg_size[0] = 10;
+ pack_options.msg_size[1] = 20;
+ pack_options.msg_size[2] = 30;
+ pack_options.msg_size[3] = 40;
+ pack_options.msg_size[4] = 50;
+ if (h5repack(FNAME1,FNAME1OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME1,FNAME1OUT,NULL,NULL,&diff_options) > 0)
+ GOERROR;
+ if (h5repack_verify(FNAME1, FNAME1OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * test several global filters
+ *-------------------------------------------------------------------------
+ */
+
+ TESTING(" several global filters");
+
+#if defined (H5_HAVE_FILTER_DEFLATE)
+
+ if (h5repack_init (&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+ if (h5repack_addfilter("GZIP=1",&pack_options) < 0)
+ GOERROR;
+ if (h5repack_addfilter("SHUF",&pack_options) < 0)
+ GOERROR;
+ if (h5repack(FNAME11,FNAME11OUT,&pack_options) < 0)
+ GOERROR;
+ if (h5diff(FNAME11,FNAME11OUT,NULL,NULL,&diff_options) >0)
+ GOERROR;
+ if (h5repack_verify(FNAME11, FNAME11OUT,&pack_options)<=0)
+ GOERROR;
+ if (h5repack_end (&pack_options) < 0)
+ GOERROR;
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+
+ /*-------------------------------------------------------------------------
+ * test file with userblock
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" file with added userblock");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+
+ if(h5repack_init(&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+
+ /* add the options for a user block size and user block filename */
+ pack_options.ublock_size = USERBLOCK_SIZE;
+ pack_options.ublock_filename = FNAME_UB;
+
+ if(h5repack(FNAME8, FNAME8OUT, &pack_options) < 0)
+ GOERROR;
+ if(h5diff(FNAME8, FNAME8OUT, NULL, NULL, &diff_options) > 0)
+ GOERROR;
+ if(h5repack_verify(FNAME8, FNAME8OUT, &pack_options) <= 0)
+ GOERROR;
+ if(verify_userblock(FNAME8OUT) < 0)
+ GOERROR;
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+
+ /*-------------------------------------------------------------------------
+ * test file with aligment
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" file with aligment");
+
+#ifdef H5_HAVE_FILTER_DEFLATE
+
+ if(h5repack_init(&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+
+ /* add the options for aligment */
+ pack_options.alignment = 1;
+ pack_options.threshold = 1;
+
+ if(h5repack(FNAME8, FNAME8OUT, &pack_options) < 0)
+ GOERROR;
+ if(h5diff(FNAME8, FNAME8OUT, NULL, NULL, &diff_options) > 0)
+ GOERROR;
+ if(h5repack_verify(FNAME8, FNAME8OUT, &pack_options) <= 0)
+ GOERROR;
+
+ /* verify aligment */
+ {
+ hsize_t threshold;
+ hsize_t alignment;
+ hid_t fapl;
+ hid_t fid;
+
+ if (( fid = H5Fopen(FNAME8OUT, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0 )
+ GOERROR;
+ if ((fapl = H5Fget_access_plist(fid)) < 0)
+ GOERROR;
+ if ( H5Pget_alignment(fapl, &threshold, &alignment ) < 0)
+ GOERROR;
+ if ( threshold != 1 )
+ GOERROR;
+ if ( alignment != 1 )
+ GOERROR;
+ if ( H5Pclose(fapl) < 0)
+ GOERROR;
+ if (H5Fclose(fid) < 0)
+ GOERROR;
+
+ }
+
+
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+
+
+ PASSED();
+#else
+ SKIPPED();
+#endif
+
+ /*-------------------------------------------------------------------------
+ * test file with userblock
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" file with committed datatypes");
+
+ if(h5repack_init(&pack_options, 0, FALSE, fs_type, fs_size) < 0)
+ GOERROR;
+
+ if(h5repack(FNAME17, FNAME17OUT, &pack_options) < 0)
+ GOERROR;
+ if(h5diff(FNAME17, FNAME17OUT, NULL, NULL, &diff_options) > 0)
+ GOERROR;
+ if(h5repack_verify(FNAME17, FNAME17OUT, &pack_options) <= 0)
+ GOERROR;
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+
+
+ PASSED();
+
+ /*-------------------------------------------------------------------------
+ * test --metadata_block_size option
+ * Also verify that output file using the metadata_block_size option is
+ * larger than the output file one not using it.
+ * FNAME4 is used because it is the same as the test file used for the
+ * shell script version of this test (h5repack.sh).
+ *-------------------------------------------------------------------------
+ */
+ TESTING(" metadata block size option");
+ /* First run without metadata option. No need to verify the correctness */
+ /* since this has been verified by earlier tests. Just record the file */
+ /* size of the output file. */
+ if(h5repack_init(&pack_options, 0, FALSE, H5F_FILE_SPACE_DEFAULT, (hsize_t)0) < 0)
+ GOERROR;
+ if(h5repack(FNAME4, FNAME4OUT, &pack_options) < 0)
+ GOERROR;
+ if(HDstat(FNAME4OUT, &file_stat) < 0)
+ GOERROR;
+ fsize1 = file_stat.st_size;
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+
+ /* run it again with metadata option */
+ if(h5repack_init(&pack_options, 0, FALSE, H5F_FILE_SPACE_DEFAULT, (hsize_t)0) < 0)
+ GOERROR;
+ pack_options.meta_block_size = 8192;
+ if(h5repack(FNAME4, FNAME4OUT, &pack_options) < 0)
+ GOERROR;
+ if(h5diff(FNAME4, FNAME4OUT, NULL, NULL, &diff_options) > 0)
+ GOERROR;
+ if(h5repack_verify(FNAME4, FNAME4OUT, &pack_options) <= 0)
+ GOERROR;
+ /* record the file size of the output file */
+ if(HDstat(FNAME4OUT, &file_stat) < 0)
+ GOERROR;
+ fsize2 = file_stat.st_size;
+ /* verify second file size is larger than the first one */
+ if(fsize2 <= fsize1)
+ GOERROR;
+ if(h5repack_end(&pack_options) < 0)
+ GOERROR;
+ PASSED();
+
+
+ /*-------------------------------------------------------------------------
+ * clean temporary test files
+ *-------------------------------------------------------------------------
+ */
+ {
+ hid_t fapl;
+
+ fapl = h5_fileaccess();
+ h5_clean_files(H5REPACK_FILENAMES, fapl);
+
+ }
+
+ puts("All h5repack tests passed.");
+
+ h5tools_close();
+
+ return 0;
+
+error:
+ puts("***** H5REPACK TESTS FAILED *****");
+ return 1;
+
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_testfiles
+*
+* Purpose: make a test file with all types of HDF5 objects,
+* datatypes and filters
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_testfiles(void)
+{
+ hid_t fid;
+
+ /*-------------------------------------------------------------------------
+ * create a file for general copy test
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME0,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_fill(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create another file for general copy test (all datatypes)
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME1,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_all_objects(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file for attributes copy test
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME2,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_attributes(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file for hard links test
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME3,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_hlinks(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file for layouts test
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME4,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_layout(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file for layout conversion test
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME18, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ return -1;
+
+ if(make_layout2(fid) < 0)
+ goto out;
+
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * for test layout conversions form chunk with unlimited max dims
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate("h5repack_layout3.h5", H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ return -1;
+
+ if(make_layout3(fid) < 0)
+ goto out;
+
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file for the H5D_ALLOC_TIME_EARLY test
+ *-------------------------------------------------------------------------
+ */
+ if (make_early() < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * create a file with the SZIP filter
+ *-------------------------------------------------------------------------
+ */
+#ifdef H5_HAVE_FILTER_SZIP
+ if((fid = H5Fcreate(FNAME7,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_szip(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+#endif /* H5_HAVE_FILTER_SZIP */
+
+
+ /*-------------------------------------------------------------------------
+ * create a file with the deflate filter
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME8,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_deflate(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with the shuffle filter
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME9,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_shuffle(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with the fletcher32 filter
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME10,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_fletcher32(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with all the filters
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME11,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_all_filters(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with the nbit filter
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME12,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_nbit(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with the scaleoffset filter
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME13,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_scaleoffset(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a big dataset
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME14,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_big(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with external dataset
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME15,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_external(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with userblock
+ *-------------------------------------------------------------------------
+ */
+ if(make_userblock() < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * create a userblock file
+ *-------------------------------------------------------------------------
+ */
+ if(make_userblock_file() < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * create a file with named datatypes
+ *-------------------------------------------------------------------------
+ */
+ if((fid = H5Fcreate(FNAME17,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_named_dtype(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create obj and region reference type datasets (bug1814)
+ * add attribute with int type (bug1726)
+ * add attribute with obj and region reference type (bug1726)
+ *-------------------------------------------------------------------------*/
+ if((fid = H5Fcreate(FNAME_REF,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ /* create reference type datasets */
+ if (make_references(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a file with obj and region references in attribute of compound and
+ * vlen datatype
+ *-------------------------------------------------------------------------*/
+ if((fid = H5Fcreate(FNAME_ATTR_REF,H5F_ACC_TRUNC,H5P_DEFAULT,H5P_DEFAULT)) < 0)
+ return -1;
+ if (make_complex_attr_references(fid) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ return -1;
+
+ return 0;
+
+out:
+ H5Fclose(fid);
+ return -1;
+}
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_all_objects
+*
+* Purpose: make a test file with all types of HDF5 objects
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_all_objects(hid_t loc_id)
+{
+ hid_t did=-1;
+ hid_t gid=-1;
+ hid_t tid=-1;
+ hid_t rid=-1;
+ hid_t sid=-1;
+ hid_t gcplid=-1;
+ hsize_t dims[1]={2};
+ /* compound datatype */
+ typedef struct s_t
+ {
+ int a;
+ float b;
+ } s_t;
+
+ /*-------------------------------------------------------------------------
+ * H5G_DATASET
+ *-------------------------------------------------------------------------
+ */
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "dset_referenced", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * H5G_GROUP
+ *-------------------------------------------------------------------------
+ */
+ if ((gid = H5Gcreate2(loc_id, "g1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Gclose(gid) < 0)
+ goto out;
+
+ /* create a group "g2" with H5P_CRT_ORDER_TRACKED set */
+ if ((gcplid = H5Pcreate(H5P_GROUP_CREATE)) < 0)
+ goto out;
+ if (H5Pset_link_creation_order(gcplid, H5P_CRT_ORDER_TRACKED) < 0)
+ goto out;
+ if ((gid = H5Gcreate2(loc_id, "g2", H5P_DEFAULT, gcplid, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Gclose(gid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5G_TYPE
+ *-------------------------------------------------------------------------
+ */
+
+ /* create a compound datatype */
+ if ((tid = H5Tcreate(H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_INT) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_FLOAT) < 0)
+ goto out;
+ if (H5Tcommit2(loc_id, "type", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5G_LINK
+ *-------------------------------------------------------------------------
+ */
+
+ if (H5Lcreate_soft("dset", loc_id, "link", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5G_UDLINK
+ *-------------------------------------------------------------------------
+ */
+ /* Create an external link. Other UD links are not supported by h5repack */
+ if (H5Lcreate_external("file", "path", loc_id, "ext_link", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * write a series of datasetes at root
+ *-------------------------------------------------------------------------
+ */
+
+ if ((rid = H5Gopen2(loc_id, "/", H5P_DEFAULT)) < 0)
+ goto out;
+ if (write_dset_in(rid,"dset_referenced",loc_id,0) < 0)
+ goto out;
+ if (H5Gclose(rid) < 0)
+ goto out;
+
+ /* close */
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ if (H5Pclose(gcplid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Dclose(did);
+ H5Gclose(gid);
+ H5Gclose(rid);
+ H5Sclose(sid);
+ H5Tclose(tid);
+ H5Pclose(gcplid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_attributes
+*
+* Purpose: make a test file with all types of attributes
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_attributes(hid_t loc_id)
+{
+ hid_t did=-1;
+ hid_t gid=-1;
+ hid_t rid=-1;
+ hid_t sid=-1;
+ hsize_t dims[1]={2};
+
+ /*-------------------------------------------------------------------------
+ * H5G_DATASET
+ *-------------------------------------------------------------------------
+ */
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "dset", H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5G_GROUP
+ *-------------------------------------------------------------------------
+ */
+ if ((gid = H5Gcreate2(loc_id, "g1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if ((rid = H5Gopen2(loc_id, "/", H5P_DEFAULT)) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * write a series of attributes on the dataset, group, and root group
+ *-------------------------------------------------------------------------
+ */
+
+ if ( write_attr_in(did,"dset",loc_id,0) < 0)
+ goto out;
+ if (write_attr_in(gid,"dset",loc_id,0) < 0)
+ goto out;
+ if (write_attr_in(rid,"dset",loc_id,0) < 0)
+ goto out;
+
+ /* close */
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Gclose(gid) < 0)
+ goto out;
+ if (H5Gclose(rid) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Dclose(did);
+ H5Gclose(gid);
+ H5Gclose(rid);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_hlinks
+*
+* Purpose: make a test file with hard links
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_hlinks(hid_t loc_id)
+{
+ hid_t g1id=-1;
+ hid_t g2id=-1;
+ hid_t g3id=-1;
+ hsize_t dims[2]={3,2};
+ int buf[3][2]= {{1,1},{1,2},{2,2}};
+
+ /*-------------------------------------------------------------------------
+ * create a dataset and some hard links to it
+ *-------------------------------------------------------------------------
+ */
+
+ if(write_dset(loc_id, 2, dims, "dset", H5T_NATIVE_INT, buf) < 0)
+ return -1;
+ if(H5Lcreate_hard(loc_id, "dset", H5L_SAME_LOC, "link1 to dset", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ return -1;
+ if(H5Lcreate_hard(loc_id, "dset", H5L_SAME_LOC, "link2 to dset", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ return -1;
+ if(H5Lcreate_hard(loc_id, "dset", H5L_SAME_LOC, "link3 to dset", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ return -1;
+
+ /*-------------------------------------------------------------------------
+ * create a group and some hard links to it
+ *-------------------------------------------------------------------------
+ */
+
+ if((g1id = H5Gcreate2(loc_id, "g1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if((g2id = H5Gcreate2(g1id, "g2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if((g3id = H5Gcreate2(g2id, "g3", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+
+ if(H5Lcreate_hard(loc_id, "g1", g2id, "link1 to g1", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+ if(H5Lcreate_hard(g1id, "g2", g3id, "link1 to g2", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+
+
+ /* close */
+ if (H5Gclose(g1id) < 0)
+ goto out;
+ if (H5Gclose(g2id) < 0)
+ goto out;
+ if (H5Gclose(g3id) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Gclose(g1id);
+ H5Gclose(g2id);
+ H5Gclose(g3id);
+ } H5E_END_TRY;
+ return -1;
+
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_szip
+*
+* Purpose: make a dataset with the SZIP filter
+*
+*-------------------------------------------------------------------------
+*/
+#ifdef H5_HAVE_FILTER_SZIP
+static
+int make_szip(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ unsigned szip_options_mask=H5_SZIP_ALLOW_K13_OPTION_MASK|H5_SZIP_NN_OPTION_MASK;
+ unsigned szip_pixels_per_block=8;
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+ int szip_can_encode = 0;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dcpl */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * SZIP
+ *-------------------------------------------------------------------------
+ */
+ /* Make sure encoding is enabled */
+ if (h5tools_can_encode(H5Z_FILTER_SZIP) == 1)
+ {
+ szip_can_encode = 1;
+ }
+ if (szip_can_encode)
+ {
+ /* set szip data */
+ if(H5Pset_szip (dcpl,szip_options_mask,szip_pixels_per_block) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_szip",sid,dcpl,buf) < 0)
+ goto out;
+ }
+ else
+ {
+ /* WARNING? SZIP is decoder only, can't generate test files */
+ }
+
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+#endif /* H5_HAVE_FILTER_SZIP */
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_deflate
+*
+* Purpose: make a dataset with the deflate filter
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_deflate(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ hobj_ref_t bufref[1]; /* reference */
+ hsize_t dims1r[1]={1};
+ int i, j, n;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dcpl */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * GZIP
+ *-------------------------------------------------------------------------
+ */
+#if defined (H5_HAVE_FILTER_DEFLATE)
+ /* set deflate data */
+ if(H5Pset_deflate(dcpl, 9) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_deflate",sid,dcpl,buf) < 0)
+ goto out;
+
+ /* create a reference to the dataset, test second seeep of file for references */
+
+ if (H5Rcreate(&bufref[0],loc_id,"dset_deflate",H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims1r,"ref",H5T_STD_REF_OBJ,bufref) < 0)
+ goto out;
+#endif
+
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_shuffle
+*
+* Purpose: make a dataset with the shuffle filter
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_shuffle(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dcpl */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * shuffle
+ *-------------------------------------------------------------------------
+ */
+
+ /* set the shuffle filter */
+ if (H5Pset_shuffle(dcpl) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_shuffle",sid,dcpl,buf) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_fletcher32
+*
+* Purpose: make a dataset with the fletcher32 filter
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_fletcher32(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * fletcher32
+ *-------------------------------------------------------------------------
+ */
+
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set the checksum filter */
+ if (H5Pset_fletcher32(dcpl) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_fletcher32",sid,dcpl,buf) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_nbit
+*
+* Purpose: make a dataset with the nbit filter
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_nbit(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hid_t dtid;
+ hid_t dsid;
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ dtid = H5Tcopy(H5T_NATIVE_INT);
+ if (H5Tset_precision(dtid,(H5Tget_precision(dtid) - 1)) < 0)
+ {
+ H5Tclose(dtid);
+ goto out;
+ }
+
+ /* remove the filters from the dcpl */
+ if(H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0)
+ {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Pset_nbit(dcpl) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if((dsid = H5Dcreate2(loc_id, "dset_nbit", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ H5Dclose(dsid);
+
+ if(H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if((dsid = H5Dcreate2(loc_id, "dset_int31", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ H5Dclose(dsid);
+
+ /*-------------------------------------------------------------------------
+ * close
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+ if (H5Tclose(dtid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_scaleoffset
+*
+* Purpose: make a dataset with the scaleoffset filter
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_scaleoffset(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hid_t dtid;
+ hid_t dsid;
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ dtid = H5Tcopy(H5T_NATIVE_INT);
+
+ /* remove the filters from the dcpl */
+ if(H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Pset_scaleoffset(dcpl, H5Z_SO_INT, 31) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if((dsid = H5Dcreate2(loc_id, "dset_scaleoffset", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ H5Dclose(dsid);
+ if((dsid = H5Dcreate2(loc_id, "dset_none", dtid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ if(H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) {
+ H5Tclose(dtid);
+ goto out;
+ }
+ H5Tclose(dtid);
+ H5Dclose(dsid);
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_all_filters
+*
+* Purpose: make a file with all filters
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_all_filters(hid_t loc_id)
+{
+ hid_t dcpl; /* dataset creation property list */
+ hid_t sid; /* dataspace ID */
+ hid_t dtid;
+ hid_t dsid;
+#if defined (H5_HAVE_FILTER_SZIP)
+ unsigned szip_options_mask=H5_SZIP_ALLOW_K13_OPTION_MASK|H5_SZIP_NN_OPTION_MASK;
+ unsigned szip_pixels_per_block=8;
+#endif /* H5_HAVE_FILTER_SZIP */
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+#if defined (H5_HAVE_FILTER_SZIP)
+ int szip_can_encode = 0;
+#endif
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ /* set up chunk */
+ if (H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+
+ /* set the shuffle filter */
+ if (H5Pset_shuffle(dcpl) < 0)
+ goto out;
+
+ /* set the checksum filter */
+ if (H5Pset_fletcher32(dcpl) < 0)
+ goto out;
+
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (h5tools_can_encode(H5Z_FILTER_SZIP) == 1)
+ {
+ szip_can_encode = 1;
+ }
+ if (szip_can_encode)
+ {
+ /* set szip data */
+ if(H5Pset_szip (dcpl,szip_options_mask,szip_pixels_per_block) < 0)
+ goto out;
+ } else {
+ /* WARNING? SZIP is decoder only, can't generate test data using szip */
+ }
+#endif
+
+#if defined (H5_HAVE_FILTER_DEFLATE)
+ /* set deflate data */
+ if(H5Pset_deflate(dcpl, 9) < 0)
+ goto out;
+#endif
+
+ if (make_dset(loc_id,"dset_all",sid,dcpl,buf) < 0)
+ goto out;
+
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set the checksum filter */
+ if (H5Pset_fletcher32(dcpl) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_fletcher32",sid,dcpl,buf) < 0)
+ goto out;
+
+
+ /* Make sure encoding is enabled */
+#if defined (H5_HAVE_FILTER_SZIP)
+ if (szip_can_encode)
+ {
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set szip data */
+ if(H5Pset_szip (dcpl,szip_options_mask,szip_pixels_per_block) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_szip",sid,dcpl,buf) < 0)
+ goto out;
+ } else
+ {
+ /* WARNING? SZIP is decoder only, can't generate test dataset */
+ }
+#endif
+
+
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set the shuffle filter */
+ if (H5Pset_shuffle(dcpl) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_shuffle",sid,dcpl,buf) < 0)
+ goto out;
+
+
+#if defined (H5_HAVE_FILTER_DEFLATE)
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl,H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set deflate data */
+ if(H5Pset_deflate(dcpl, 1) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_deflate",sid,dcpl,buf) < 0)
+ goto out;
+#endif
+
+
+
+ /* remove the filters from the dcpl */
+ if (H5Premove_filter(dcpl, H5Z_FILTER_ALL) < 0)
+ goto out;
+ /* set the shuffle filter */
+ if (H5Pset_nbit(dcpl) < 0)
+ goto out;
+ if ((dtid = H5Tcopy(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if (H5Tset_precision(dtid, (H5Tget_precision(dtid) - 1)) < 0)
+ goto out;
+ if((dsid = H5Dcreate2(loc_id, "dset_nbit", dtid, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Dwrite(dsid, dtid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
+ goto out;
+
+ /* close */
+ if(H5Tclose(dtid) < 0)
+ return -1;
+ if(H5Dclose(dsid) < 0)
+ return -1;
+
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_early
+*
+* Purpose: create a file for the H5D_ALLOC_TIME_EARLY test
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_early(void)
+{
+ hsize_t dims[1] ={3000};
+ hsize_t cdims[1]={30};
+ hid_t fid=-1;
+ hid_t did=-1;
+ hid_t sid=-1;
+ hid_t tid=-1;
+ hid_t dcpl=-1;
+ int i;
+ char name[10];
+ int iter=100;
+
+ if ((fid = H5Fcreate(FNAME5, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ return -1;
+ if (H5Fclose(fid) < 0)
+ goto out;
+
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if (H5Pset_chunk(dcpl, 1, cdims) < 0)
+ goto out;
+ if (H5Pset_alloc_time(dcpl, H5D_ALLOC_TIME_EARLY) < 0)
+ goto out;
+
+ for(i = 0; i < iter; i++)
+ {
+ if ((fid = H5Fopen(FNAME5, H5F_ACC_RDWR, H5P_DEFAULT)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(fid, "early", H5T_NATIVE_DOUBLE, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if ((tid = H5Tcopy(H5T_NATIVE_DOUBLE)) < 0)
+ goto out;
+ sprintf(name, "%d", i);
+ if ((H5Tcommit2(fid, name, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Ldelete(fid, "early", H5P_DEFAULT) < 0)
+ goto out;
+ if (H5Fclose(fid) < 0)
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * do the same without close/opening the file and creating the dataset
+ *-------------------------------------------------------------------------
+ */
+
+ if ((fid = H5Fcreate(FNAME6, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ return -1;
+
+ for(i = 0; i < iter; i++)
+ {
+ if ((tid = H5Tcopy(H5T_NATIVE_DOUBLE)) < 0)
+ goto out;
+ sprintf(name, "%d", i);
+ if ((H5Tcommit2(fid, name, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ }
+
+ if (H5Sclose(sid) < 0)
+ goto out;
+ if (H5Pclose(dcpl) < 0)
+ goto out;
+ if (H5Fclose(fid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Tclose(tid);
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ H5Dclose(did);
+ H5Fclose(fid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_layout
+*
+* Purpose: make several datasets with several layouts in location LOC_ID
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_layout(hid_t loc_id)
+{
+ hid_t dcpl=-1; /* dataset creation property list */
+ hid_t sid=-1; /* dataspace ID */
+ hsize_t dims[RANK]={DIM1,DIM2};
+ hsize_t chunk_dims[RANK]={CDIM1,CDIM2};
+ int buf[DIM1][DIM2];
+ int i, j, n;
+ char name[6];
+
+
+ for (i=n=0; i<DIM1; i++)
+ {
+ for (j=0; j<DIM2; j++)
+ {
+ buf[i][j]=n++;
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * make several dataset with no filters
+ *-------------------------------------------------------------------------
+ */
+ for (i=0; i<4; i++)
+ {
+ sprintf(name,"dset%d",i+1);
+ if (write_dset(loc_id,RANK,dims,name,H5T_NATIVE_INT,buf) < 0)
+ return -1;
+ }
+
+
+ /*-------------------------------------------------------------------------
+ * make several dataset with several layout options
+ *-------------------------------------------------------------------------
+ */
+ /* create a space */
+ if((sid = H5Screate_simple(RANK, dims, NULL)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ {
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5D_COMPACT
+ *-------------------------------------------------------------------------
+ */
+ if(H5Pset_layout (dcpl,H5D_COMPACT) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_compact",sid,dcpl,buf) < 0)
+ {
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5D_CONTIGUOUS
+ *-------------------------------------------------------------------------
+ */
+ if(H5Pset_layout (dcpl,H5D_CONTIGUOUS) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_contiguous",sid,dcpl,buf) < 0)
+ {
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5D_CHUNKED
+ *-------------------------------------------------------------------------
+ */
+ if(H5Pset_chunk(dcpl, RANK, chunk_dims) < 0)
+ goto out;
+ if (make_dset(loc_id,"dset_chunk",sid,dcpl,buf) < 0)
+ {
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+/*-------------------------------------------------------------------------
+ * Function: make_layout2
+ *
+ * Purpose: create datasets with contiguous and chunked layouts:
+ *
+ * contig_small: < 1k, fixed dims datspace
+ * chunked_small_fixed: < 1k, fixed dims dataspace
+ *
+ *-------------------------------------------------------------------------
+ */
+#define S_DIM1 4
+#define S_DIM2 10
+#define CONTIG_S "contig_small"
+#define CHUNKED_S_FIX "chunked_small_fixed"
+
+static
+int make_layout2(hid_t loc_id)
+{
+
+ hid_t contig_dcpl = -1; /* dataset creation property list */
+ hid_t chunked_dcpl = -1; /* dataset creation property list */
+
+ int i, j, n; /* Local index variables */
+ int ret_value = -1; /* Return value */
+ hid_t s_sid = -1; /* dataspace ID */
+
+ hsize_t s_dims[RANK] = {S_DIM1,S_DIM2}; /* Dataspace (< 1 k) */
+ hsize_t chunk_dims[RANK] = {S_DIM1/2, S_DIM2/2}; /* Dimension sizes for chunks */
+
+ int s_buf[S_DIM1][S_DIM2]; /* Temporary buffer */
+
+ for(i = n = 0; i < S_DIM1; i++) {
+ for (j = 0; j < S_DIM2; j++) {
+ s_buf[i][j] = n++;
+ }
+ }
+
+ /* Create dataspaces */
+ if((s_sid = H5Screate_simple(RANK, s_dims, NULL)) < 0)
+ goto out;
+
+ /* Create contiguous datasets */
+ if((contig_dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if(H5Pset_layout(contig_dcpl, H5D_CONTIGUOUS) < 0)
+ goto out;
+ if(make_dset(loc_id, CONTIG_S, s_sid, contig_dcpl, s_buf) < 0)
+ goto out;
+
+ /* Create chunked datasets */
+ if((chunked_dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if(H5Pset_chunk(chunked_dcpl, RANK, chunk_dims) < 0)
+ goto out;
+ if(make_dset(loc_id, CHUNKED_S_FIX, s_sid, chunked_dcpl, s_buf) < 0)
+ goto out;
+
+ ret_value = 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(contig_dcpl);
+ H5Pclose(chunked_dcpl);
+
+ H5Sclose(s_sid);
+
+ } H5E_END_TRY;
+
+ return(ret_value);
+
+} /* make_layout2() */
+
+/*-------------------------------------------------------------------------
+* Function: make_layout3
+*
+* Purpose: make chunked datasets with unlimited max dim and chunk dim is
+* bigger than current dim. (HDFFV-7933)
+* Test for converting chunk to chunk , chunk to conti and chunk
+* to compact.
+* - The chunk to chunk changes layout bigger than any current dim
+* again.
+* - The chunk to compact test dataset bigger than 64K, should
+* remain original layout.*
+*
+*-------------------------------------------------------------------------
+*/
+#define DIM1_L3 300
+#define DIM2_L3 200
+/* small size */
+#define SDIM1_L3 4
+#define SDIM2_L3 50
+static
+int make_layout3(hid_t loc_id)
+{
+ hid_t dcpl1=-1; /* dataset creation property list */
+ hid_t dcpl2=-1; /* dataset creation property list */
+ hid_t dcpl3=-1; /* dataset creation property list */
+ hid_t sid1=-1; /* dataspace ID */
+ hid_t sid2=-1; /* dataspace ID */
+ hsize_t dims1[RANK]={DIM1_L3,DIM2_L3};
+ hsize_t dims2[RANK]={SDIM1_L3,SDIM2_L3};
+ hsize_t maxdims[RANK]={H5S_UNLIMITED, H5S_UNLIMITED};
+ hsize_t chunk_dims1[RANK]={DIM1_L3*2,5};
+ hsize_t chunk_dims2[RANK]={SDIM1_L3 + 2, SDIM2_L3/2};
+ hsize_t chunk_dims3[RANK]={SDIM1_L3 - 2, SDIM2_L3/2};
+ int buf1[DIM1_L3][DIM2_L3];
+ int buf2[SDIM1_L3][SDIM2_L3];
+ int i, j, n;
+
+ /* init buf1 */
+ for (i=n=0; i<DIM1_L3; i++)
+ {
+ for (j=0; j<DIM2_L3; j++)
+ {
+ buf1[i][j]=n++;
+ }
+ }
+
+ /* init buf2 */
+ for (i=n=0; i<SDIM1_L3; i++)
+ {
+ for (j=0; j<SDIM2_L3; j++)
+ {
+ buf2[i][j]=n++;
+ }
+ }
+
+ /*-------------------------------------------------------------------------
+ * make chunked dataset with
+ * - dset maxdims are UNLIMIT
+ * - a chunk dim is bigger than dset dim
+ * - dset size bigger than compact max (64K)
+ *-------------------------------------------------------------------------
+ */
+ /* create a space */
+ if((sid1 = H5Screate_simple(RANK, dims1, maxdims)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl1 = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ {
+ goto out;
+ }
+
+ if(H5Pset_chunk(dcpl1, RANK, chunk_dims1) < 0)
+ goto out;
+ if (make_dset(loc_id,"chunk_unlimit1",sid1,dcpl1,buf1) < 0)
+ {
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * make chunked dataset with
+ * - dset maxdims are UNLIMIT
+ * - a chunk dim is bigger than dset dim
+ * - dset size smaller than compact (64K)
+ *-------------------------------------------------------------------------
+ */
+
+ /* create a space */
+ if((sid2 = H5Screate_simple(RANK, dims2, maxdims)) < 0)
+ return -1;
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl2 = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+
+ if(H5Pset_chunk(dcpl2, RANK, chunk_dims2) < 0)
+ goto out;
+
+ if (make_dset(loc_id,"chunk_unlimit2",sid2,dcpl2,buf2) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * make chunked dataset with
+ * - dset maxdims are UNLIMIT
+ * - a chunk dims are smaller than dset dims
+ * - dset size smaller than compact (64K)
+ *-------------------------------------------------------------------------
+ */
+ /* create a dataset creation property list; the same DCPL is used for all dsets */
+ if ((dcpl3 = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+
+ if(H5Pset_chunk(dcpl3, RANK, chunk_dims3) < 0)
+ goto out;
+
+ if (make_dset(loc_id,"chunk_unlimit3",sid2,dcpl3,buf2) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * close space and dcpl
+ *-------------------------------------------------------------------------
+ */
+ if(H5Sclose(sid1) < 0)
+ goto out;
+ if(H5Sclose(sid2) < 0)
+ goto out;
+ if(H5Pclose(dcpl1) < 0)
+ goto out;
+ if(H5Pclose(dcpl2) < 0)
+ goto out;
+ if(H5Pclose(dcpl3) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Sclose(sid1);
+ H5Sclose(sid2);
+ H5Pclose(dcpl1);
+ H5Pclose(dcpl2);
+ H5Pclose(dcpl3);
+ } H5E_END_TRY;
+ return -1;
+}
+
+/*-------------------------------------------------------------------------
+* Function: make a file with an integer dataset with a fill value
+*
+* Purpose: test copy of fill values
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_fill(hid_t loc_id)
+{
+ hid_t did=-1;
+ hid_t sid=-1;
+ hid_t dcpl;
+ hsize_t dims[2]={3,2};
+ int buf[3][2]= {{1,1},{1,2},{2,2}};
+ int fillvalue = 2;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER, write a fill value
+ *-------------------------------------------------------------------------
+ */
+ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if(H5Pset_fill_value(dcpl, H5T_NATIVE_INT, &fillvalue) < 0)
+ goto out;
+ if((sid = H5Screate_simple(2,dims,NULL)) < 0)
+ goto out;
+ if((did = H5Dcreate2(loc_id, "dset_fill", H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
+ goto out;
+
+ /* close */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ H5Dclose(did);
+ } H5E_END_TRY;
+ return -1;
+
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_big
+*
+* Purpose: used in test read by hyperslabs. Creates a 128MB dataset.
+* Only 1 1024Kb hyperslab is written.
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_big(hid_t loc_id)
+{
+ hid_t did=-1;
+ hid_t f_sid=-1;
+ hid_t m_sid=-1;
+ hid_t tid;
+ hid_t dcpl;
+ hsize_t dims[1]={ H5TOOLS_MALLOCSIZE + 1}; /* dataset dimensions */
+ hsize_t hs_size[1]; /* hyperslab dimensions */
+ hsize_t hs_start[1]; /* hyperslab start */
+ hsize_t chunk_dims[1]={1024}; /* chunk dimensions */
+ size_t size;
+ size_t nelmts=(size_t)1024;
+ signed char fillvalue=-1;
+ signed char *buf=NULL;
+
+ /* write one 1024 byte hyperslab */
+ hs_start[0] = 0;
+ hs_size[0] = 1024;
+
+ /* create */
+ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if(H5Pset_fill_value(dcpl, H5T_NATIVE_SCHAR, &fillvalue) < 0)
+ goto out;
+ if(H5Pset_chunk(dcpl, 1, chunk_dims) < 0)
+ goto out;
+ if((f_sid = H5Screate_simple(1,dims,NULL)) < 0)
+ goto out;
+ if((did = H5Dcreate2(loc_id, "dset", H5T_NATIVE_SCHAR, f_sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if((m_sid = H5Screate_simple(1, hs_size, hs_size)) < 0)
+ goto out;
+ if((tid = H5Dget_type(did)) < 0)
+ goto out;
+ if((size = H5Tget_size(tid))<=0)
+ goto out;
+
+ /* initialize buffer to 0 */
+ buf=(signed char *) HDcalloc( nelmts, size);
+
+ if (H5Sselect_hyperslab (f_sid,H5S_SELECT_SET,hs_start,NULL,hs_size, NULL) < 0)
+ goto out;
+ if (H5Dwrite (did,H5T_NATIVE_SCHAR,m_sid,f_sid,H5P_DEFAULT,buf) < 0)
+ goto out;
+
+ HDfree(buf);
+ buf=NULL;
+
+ /* close */
+ if(H5Sclose(f_sid) < 0)
+ goto out;
+ if(H5Sclose(m_sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(dcpl);
+ H5Sclose(f_sid);
+ H5Sclose(m_sid);
+ H5Dclose(did);
+ } H5E_END_TRY;
+ return -1;
+
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_external
+*
+* Purpose: create a external dataset
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_external(hid_t loc_id)
+{
+ hid_t did=-1;
+ hid_t sid=-1;
+ hid_t dcpl;
+ int buf[2]={1,2};
+ hsize_t cur_size[1]; /* data space current size */
+ hsize_t max_size[1]; /* data space maximum size */
+ hsize_t size;
+
+ cur_size[0] = max_size[0] = 2;
+ size = max_size[0] * sizeof(int);
+
+ /* create */
+ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if(H5Pset_external(dcpl, H5REPACK_EXTFILE, (off_t)0, size) < 0)
+ goto out;
+ if((sid = H5Screate_simple(1,cur_size, max_size)) < 0)
+ goto out;
+ if((did = H5Dcreate2(loc_id, "external", H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
+ goto out;
+
+ /* close */
+ if(H5Sclose(sid) < 0)
+ goto out;
+ if(H5Pclose(dcpl) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Pclose(dcpl);
+ H5Sclose(sid);
+ H5Dclose(did);
+ } H5E_END_TRY;
+ return -1;
+
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_userblock
+*
+* Purpose: create a file for the userblock copying test
+*
+*-------------------------------------------------------------------------
+*/
+static int
+make_userblock(void)
+{
+ hid_t fid = -1;
+ hid_t fcpl = -1;
+ int fd = -1; /* File descriptor for writing userblock */
+ char ub[USERBLOCK_SIZE]; /* User block data */
+ ssize_t nwritten; /* # of bytes written */
+ size_t u; /* Local index variable */
+
+ /* Create file creation property list with userblock set */
+ if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0)
+ goto out;
+ if(H5Pset_userblock(fcpl, (hsize_t)USERBLOCK_SIZE) < 0)
+ goto out;
+
+ /* Create file with userblock */
+ if((fid = H5Fcreate(FNAME16, H5F_ACC_TRUNC, fcpl, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Fclose(fid) < 0)
+ goto out;
+
+ /* Close file creation property list */
+ if(H5Pclose(fcpl) < 0)
+ goto out;
+
+
+ /* Initialize userblock data */
+ for(u = 0; u < USERBLOCK_SIZE; u++)
+ ub[u] = (char)('a' + (char)(u % 26));
+
+ /* Re-open HDF5 file, as "plain" file */
+ if((fd = HDopen(FNAME16, O_WRONLY, 0644)) < 0)
+ goto out;
+
+ /* Write userblock data */
+ nwritten = HDwrite(fd, ub, (size_t)USERBLOCK_SIZE);
+ HDassert(nwritten == USERBLOCK_SIZE);
+
+ /* Close file */
+ HDclose(fd);
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(fcpl);
+ H5Fclose(fid);
+ } H5E_END_TRY;
+ if(fd > 0)
+ HDclose(fd);
+
+ return -1;
+} /* end make_userblock() */
+
+/*-------------------------------------------------------------------------
+* Function: verify_userblock
+*
+* Purpose: Verify that the userblock was copied correctly
+*
+*-------------------------------------------------------------------------
+*/
+static int
+verify_userblock( const char* filename)
+{
+ hid_t fid = -1;
+ hid_t fcpl = -1;
+ int fd = -1; /* File descriptor for writing userblock */
+ char ub[USERBLOCK_SIZE]; /* User block data */
+ hsize_t ub_size = 0; /* User block size */
+ ssize_t nread; /* # of bytes read */
+ size_t u; /* Local index variable */
+
+ /* Open file with userblock */
+ if((fid = H5Fopen(filename, H5F_ACC_RDONLY, H5P_DEFAULT)) < 0)
+ goto out;
+
+ /* Retrieve file creation property list & userblock size */
+ if((fcpl = H5Fget_create_plist(fid)) < 0)
+ goto out;
+ if(H5Pget_userblock(fcpl, &ub_size) < 0)
+ goto out;
+
+ /* Verify userblock size is correct */
+ if(ub_size != USERBLOCK_SIZE)
+ goto out;
+
+ /* Close file creation property list */
+ if(H5Pclose(fcpl) < 0)
+ goto out;
+
+ if(H5Fclose(fid) < 0)
+ goto out;
+
+
+ /* Re-open HDF5 file, as "plain" file */
+ if((fd = HDopen(filename, O_RDONLY, 0)) < 0)
+ goto out;
+
+ /* Read userblock data */
+ nread = HDread(fd, ub, (size_t)USERBLOCK_SIZE);
+ HDassert(nread == USERBLOCK_SIZE);
+
+ /* Verify userblock data */
+ for(u = 0; u < USERBLOCK_SIZE; u++)
+ if(ub[u] != (char)('a' + (u % 26)))
+ goto out;
+
+ /* Close file */
+ HDclose(fd);
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(fcpl);
+ H5Fclose(fid);
+ } H5E_END_TRY;
+ if(fd > 0)
+ HDclose(fd);
+
+ return -1;
+} /* end verify_userblock() */
+
+
+/*-------------------------------------------------------------------------
+* Function: make_userblock_file
+*
+* Purpose: create a file for the userblock add test
+*
+*-------------------------------------------------------------------------
+*/
+static int
+make_userblock_file(void)
+{
+ int fd = -1; /* File descriptor for writing userblock */
+ char ub[USERBLOCK_SIZE]; /* User block data */
+ ssize_t nwritten; /* # of bytes written */
+ size_t u; /* Local index variable */
+
+ /* initialize userblock data */
+ for(u = 0; u < USERBLOCK_SIZE; u++)
+ ub[u] = (char)('a' + (char)(u % 26));
+
+ /* open file */
+ if((fd = HDopen(FNAME_UB,O_WRONLY|O_CREAT|O_TRUNC, 0644 )) < 0)
+ goto out;
+
+ /* write userblock data */
+ nwritten = HDwrite(fd, ub, (size_t)USERBLOCK_SIZE);
+ HDassert(nwritten == USERBLOCK_SIZE);
+
+ /* close file */
+ HDclose(fd);
+
+ return 0;
+
+out:
+
+ if(fd > 0)
+ HDclose(fd);
+
+ return -1;
+}
+
+/*-------------------------------------------------------------------------
+* Function: write_dset_in
+*
+* Purpose: write datasets in LOC_ID
+*
+* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+*
+* Date: November 12, 2003
+*
+*-------------------------------------------------------------------------
+*/
+static
+int write_dset_in(hid_t loc_id,
+ const char* dset_name, /* for saving reference to dataset*/
+ hid_t file_id,
+ int make_diffs /* flag to modify data buffers */)
+{
+ /* compound datatype */
+ typedef struct s_t
+ {
+ char a;
+ double b;
+ } s_t;
+
+ typedef enum
+ {
+ RED,
+ GREEN
+ } e_t;
+
+ hid_t did=-1;
+ hid_t sid=-1;
+ hid_t tid=-1;
+ hid_t pid=-1;
+ unsigned i, j;
+ int val, k, n;
+ float f;
+
+ /* create 1D attributes with dimension [2], 2 elements */
+ hsize_t dims[1]={2};
+ hsize_t dims1r[1]={2};
+ char buf1[2][3]= {"ab","de"}; /* string */
+ char buf2[2]= {1,2}; /* bitfield, opaque */
+ s_t buf3[2]= {{1,2},{3,4}}; /* compound */
+ hobj_ref_t buf4[2]; /* reference */
+ e_t buf45[2]= {RED,GREEN}; /* enum */
+ hvl_t buf5[2]; /* vlen */
+ hsize_t dimarray[1]={3}; /* array dimension */
+ int buf6[2][3]= {{1,2,3},{4,5,6}}; /* array */
+ int buf7[2]= {1,2}; /* integer */
+ float buf8[2]= {1,2}; /* float */
+
+ /* create 2D attributes with dimension [3][2], 6 elements */
+ hsize_t dims2[2]={3,2};
+ hsize_t dims2r[2]={1,1};
+ char buf12[6][3]= {"ab","cd","ef","gh","ij","kl"}; /* string */
+ char buf22[3][2]= {{1,2},{3,4},{5,6}}; /* bitfield, opaque */
+ s_t buf32[6]= {{1,2},{3,4},{5,6},{7,8},{9,10},{11,12}}; /* compound */
+ hobj_ref_t buf42[1][1]; /* reference */
+ hvl_t buf52[3][2]; /* vlen */
+ int buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}}; /* array */
+ int buf72[3][2]= {{1,2},{3,4},{5,6}}; /* integer */
+ float buf82[3][2]= {{1,2},{3,4},{5,6}}; /* float */
+
+ /* create 3D attributes with dimension [4][3][2], 24 elements */
+ hsize_t dims3[3]={4,3,2};
+ hsize_t dims3r[3]={1,1,1};
+ char buf13[24][3]= {"ab","cd","ef","gh","ij","kl","mn","pq",
+ "rs","tu","vw","xz","AB","CD","EF","GH",
+ "IJ","KL","MN","PQ","RS","TU","VW","XZ"}; /* string */
+ char buf23[4][3][2]; /* bitfield, opaque */
+ s_t buf33[4][3][2]; /* compound */
+ hobj_ref_t buf43[1][1][1]; /* reference */
+ hvl_t buf53[4][3][2]; /* vlen */
+ int buf63[24][3]; /* array */
+ int buf73[4][3][2]; /* integer */
+ float buf83[4][3][2]; /* float */
+
+
+ /*-------------------------------------------------------------------------
+ * 1D
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++)
+ for(j = 0; j < 2; j++)
+ buf1[i][j] = 'z';
+ }
+
+
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"string",tid,buf1) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+
+ /* create hard link */
+ if (H5Lcreate_hard(loc_id, "string", H5L_SAME_LOC, "string_link", H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++)
+ buf2[i] = buf2[1] = 0;
+ }
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"bitfield",tid,buf2) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++) {
+ buf3[i].a = 0;
+ buf3[i].b = 0;
+ }
+ }
+
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"opaque",tid,buf2) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++)
+ buf45[i] = GREEN;
+ }
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"compound",tid,buf3) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* object references ( H5R_OBJECT ) */
+ buf4[0]=0;
+ buf4[1]=0;
+ if (dset_name)
+ {
+ if (H5Rcreate(&buf4[0],file_id,dset_name,H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims1r,"refobj",H5T_STD_REF_OBJ,buf4) < 0)
+ goto out;
+ }
+
+ /* Dataset region reference ( H5R_DATASET_REGION ) */
+ if (make_dset_reg_ref(loc_id) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"enum",tid,buf45) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+
+ buf5[0].len = 1;
+ buf5[0].p = HDmalloc( 1 * sizeof(int));
+ ((int *)buf5[0].p)[0]=1;
+ buf5[1].len = 2;
+ buf5[1].p = HDmalloc( 2 * sizeof(int));
+ ((int *)buf5[1].p)[0] = 2;
+ ((int *)buf5[1].p)[1] = 3;
+
+ if(make_diffs) {
+ ((int *)buf5[0].p)[0] = 0;
+ ((int *)buf5[1].p)[0] = 0;
+ ((int *)buf5[1].p)[1] = 0;
+ }
+
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "vlen", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf5) < 0)
+ goto out;
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf5) < 0)
+ goto out;
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++)
+ for(j = 0; j < 3; j++)
+ buf6[i][j] = 0;
+ }
+
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (write_dset(loc_id, 1, dims, "array", tid, buf6) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ {
+
+ hsize_t TEST_BUFSIZE = (128 * 1024 * 1024); /* 128MB */
+ double *dbuf; /* information to write */
+ size_t size;
+ hsize_t sdims[] = {1};
+ hsize_t tdims[] = {TEST_BUFSIZE / sizeof(double) + 1};
+ unsigned u;
+
+ /* allocate and initialize array data to write */
+ size = ( TEST_BUFSIZE / sizeof(double) + 1 ) * sizeof(double);
+ dbuf = (double*)HDmalloc( size );
+ if (NULL == dbuf)
+ {
+ printf ("\nError: Cannot allocate memory for \"arrayd\" data buffer size %dMB.\n", (int) size / 1000000 );
+ goto out;
+ }
+
+ for( u = 0; u < TEST_BUFSIZE / sizeof(double) + 1; u++)
+ dbuf[u] = u;
+
+ if (make_diffs)
+ {
+ dbuf[5] = 0;
+ dbuf[6] = 0;
+ }
+
+ /* create a type larger than TEST_BUFSIZE */
+ if ((tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, 1, tdims)) < 0)
+ goto out;
+ size = H5Tget_size(tid);
+ if ((sid = H5Screate_simple(1, sdims, NULL)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "arrayd", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+#if defined(WRITE_ARRAY)
+ H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dbuf);
+#endif
+
+ /* close */
+ H5Dclose(did);
+ H5Tclose(tid);
+ H5Sclose(sid);
+ HDfree( dbuf );
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER and H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs) {
+ for(i = 0; i < 2; i++) {
+ buf7[i] = 0;
+ buf8[i] = 0;
+ }
+ }
+
+ if (write_dset(loc_id,1,dims,"integer",H5T_NATIVE_INT,buf7) < 0)
+ goto out;
+ if (write_dset(loc_id,1,dims,"float",H5T_NATIVE_FLOAT,buf8) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * 2D
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf12, 'z', sizeof buf12);
+ }
+
+
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (write_dset(loc_id,2,dims2,"string2D",tid,buf12) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+
+ if (make_diffs)
+ {
+ HDmemset(buf22,0,sizeof buf22);
+ }
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (write_dset(loc_id,2,dims2,"bitfield2D",tid,buf22) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (write_dset(loc_id,2,dims2,"opaque2D",tid,buf22) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf32,0,sizeof buf32);
+ }
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (write_dset(loc_id,2,dims2,"compound2D",tid,buf32) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* Create references to dataset */
+ if (dset_name)
+ {
+ if (H5Rcreate(&buf42[0][0], file_id, dset_name, H5R_OBJECT, (hid_t)-1) < 0)
+ goto out;
+ if (write_dset(loc_id, 2, dims2r, "refobj2D", H5T_STD_REF_OBJ, buf42) < 0)
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (write_dset(loc_id,2,dims2,"enum2D",tid,0) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+ n = 0;
+ for(i = 0; i < 3; i++) {
+ for(j = 0; j < 2; j++) {
+ unsigned l;
+
+ buf52[i][j].p = HDmalloc((i + 1) * sizeof(int));
+ buf52[i][j].len = (size_t)(i + 1);
+ for(l = 0; l < i + 1; l++) {
+ if(make_diffs)
+ ((int *)buf52[i][j].p)[l] = 0;
+ else
+ ((int *)buf52[i][j].p)[l] = n++;
+ }
+ }
+ }
+
+ if ((sid = H5Screate_simple(2, dims2, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "vlen2D", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf52) < 0)
+ goto out;
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf52) < 0)
+ goto out;
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf62,0,sizeof buf62);
+ }
+
+
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (write_dset(loc_id, 2, dims2, "array2D", tid, buf62) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER, write a fill value
+ *-------------------------------------------------------------------------
+ */
+
+
+ if(make_diffs) {
+ HDmemset(buf72, 0, sizeof buf72);
+ HDmemset(buf82, 0, sizeof buf82);
+ }
+
+
+ if ((pid = H5Pcreate(H5P_DATASET_CREATE)) < 0)
+ goto out;
+ if ((sid = H5Screate_simple(2, dims2, NULL)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "integer2D", H5T_NATIVE_INT, sid, H5P_DEFAULT, pid, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf72) < 0)
+ goto out;
+ if (H5Pclose(pid) < 0)
+ goto out;
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+
+ if (write_dset(loc_id,2,dims2,"float2D",H5T_NATIVE_FLOAT,buf82) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * 3D
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf13,'z',sizeof buf13);
+ }
+
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"string3D",tid,buf13) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+
+ n=1;
+ for(i = 0; i < 4; i++) {
+ for(j = 0; j < 3; j++) {
+ for(k = 0; k < 2; k++) {
+ if(make_diffs)
+ buf23[i][j][k] = 0;
+ else
+ buf23[i][j][k] = (char)(n++);
+ }
+ }
+ }
+
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"bitfield3D",tid,buf23) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"opaque3D",tid,buf23) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+
+ n=1;
+ for(i = 0; i < 4; i++) {
+ for(j = 0; j < 3; j++) {
+ for(k = 0; k < 2; k++) {
+ if(make_diffs) {
+ buf33[i][j][k].a = 0;
+ buf33[i][j][k].b = 0;
+ }
+ else {
+ buf33[i][j][k].a = (char)(n++);
+ buf33[i][j][k].b = n++;
+ }
+ }
+ }
+ }
+
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"compound3D",tid,buf33) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* Create references to dataset */
+ if (dset_name)
+ {
+ if (H5Rcreate(&buf43[0][0][0], file_id, dset_name, H5R_OBJECT, (hid_t)-1) < 0)
+ goto out;
+ if (write_dset(loc_id, 3, dims3r, "refobj3D", H5T_STD_REF_OBJ, buf43) < 0)
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"enum3D",tid,0) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+ n = 0;
+ for(i = 0; i < 4; i++) {
+ for(j = 0; j < 3; j++) {
+ for(k = 0; k < 2; k++) {
+ unsigned l;
+
+ buf53[i][j][k].p = HDmalloc((i + 1) * sizeof(int));
+ buf53[i][j][k].len = (size_t)(i + 1);
+ for(l = 0; l < i + 1; l++) {
+ if(make_diffs)
+ ((int *)buf53[i][j][k].p)[l] = 0;
+ else
+ ((int *)buf53[i][j][k].p)[l] = n++;
+ }
+ }
+ }
+ }
+
+ if ((sid = H5Screate_simple(3, dims3, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "vlen3D", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf53) < 0)
+ goto out;
+
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf53) < 0)
+ goto out;
+
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+
+
+ n = 1;
+ for(i = 0; i < 24; i++) {
+ for(j = 0; j < dimarray[0]; j++) {
+ if(make_diffs)
+ buf63[i][j] = 0;
+ else
+ buf63[i][j] = n++;
+ }
+ }
+
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (write_dset(loc_id, 3, dims3, "array3D", tid, buf63) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER and H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+ n=1; f=1;
+ for (i = 0; i < 4; i++) {
+ for (j = 0; j < 3; j++) {
+ for (k = 0; k < 2; k++) {
+ if (make_diffs) {
+ buf73[i][j][k]=0;
+ buf83[i][j][k]=0;
+ }
+ else {
+ buf73[i][j][k]=n++;
+ buf83[i][j][k]=f++;
+ }
+ }
+ }
+ }
+ if (write_dset(loc_id,3,dims3,"integer3D",H5T_NATIVE_INT,buf73) < 0)
+ goto out;
+ if (write_dset(loc_id,3,dims3,"float3D",H5T_NATIVE_FLOAT,buf83) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Pclose(pid);
+ H5Sclose(sid);
+ H5Dclose(did);
+ H5Tclose(tid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_dset_reg_ref
+*
+* Purpose: write dataset region references
+*
+*-------------------------------------------------------------------------
+*/
+
+#define SPACE1_RANK 1
+#define SPACE1_DIM1 1
+#define SPACE2_RANK 2
+#define SPACE2_DIM1 10
+#define SPACE2_DIM2 10
+static
+int make_dset_reg_ref(hid_t loc_id)
+{
+ hid_t did1=-1; /* Dataset ID */
+ hid_t did2=-1; /* Dereferenced dataset ID */
+ hid_t sid1=-1; /* Dataspace ID #1 */
+ hid_t sid2=-1; /* Dataspace ID #2 */
+ hsize_t dims1[] = {SPACE1_DIM1};
+ hsize_t dims2[] = {SPACE2_DIM1, SPACE2_DIM2};
+ hsize_t start[SPACE2_RANK]; /* Starting location of hyperslab */
+ hsize_t stride[SPACE2_RANK]; /* Stride of hyperslab */
+ hsize_t count[SPACE2_RANK]; /* Element count of hyperslab */
+ hsize_t block[SPACE2_RANK]; /* Block size of hyperslab */
+ hdset_reg_ref_t *wbuf=NULL; /* buffer to write to disk */
+ int *dwbuf=NULL; /* Buffer for writing numeric data to disk */
+ int i; /* counting variables */
+ int retval = -1; /* return value */
+
+ /* Allocate write & read buffers */
+ wbuf = (hdset_reg_ref_t *)HDcalloc(sizeof(hdset_reg_ref_t), (size_t)SPACE1_DIM1);
+ dwbuf = (int *)HDmalloc(sizeof(int) * SPACE2_DIM1 * SPACE2_DIM2);
+
+ /* Create dataspace for datasets */
+ if ((sid2 = H5Screate_simple(SPACE2_RANK, dims2, NULL)) < 0)
+ goto out;
+
+ /* Create a dataset */
+ if ((did2 = H5Dcreate2(loc_id, "dsetreg", H5T_NATIVE_UCHAR, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+
+ for (i = 0; i < SPACE2_DIM1 * SPACE2_DIM2; i++)
+ dwbuf[i] = i * 3;
+
+ /* Write selection to disk */
+ if (H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, dwbuf) < 0)
+ goto out;
+
+ /* Create dataspace for the reference dataset */
+ if ((sid1 = H5Screate_simple(SPACE1_RANK, dims1, NULL)) < 0)
+ goto out;
+
+ /* Create a dataset */
+ if ((did1 = H5Dcreate2(loc_id, "refreg", H5T_STD_REF_DSETREG, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+
+ /* Select 6x6 hyperslab for first reference */
+ start[0] = 2; start[1] = 2;
+ stride[0] = 1; stride[1] = 1;
+ count[0] = 6; count[1] = 6;
+ block[0] = 1; block[1] = 1;
+ if (H5Sselect_hyperslab(sid2, H5S_SELECT_SET, start, stride, count, block) < 0)
+ goto out;
+
+
+ /* Store dataset region */
+ if (H5Rcreate(&wbuf[0], loc_id, "dsetreg", H5R_DATASET_REGION, sid2) < 0)
+ goto out;
+
+ /* Write selection to disk */
+ if (H5Dwrite(did1,H5T_STD_REF_DSETREG,H5S_ALL,H5S_ALL,H5P_DEFAULT,wbuf) < 0)
+ goto out;
+
+ /* Close all objects */
+ if (H5Sclose(sid1) < 0)
+ goto out;
+ if (H5Dclose(did1) < 0)
+ goto out;
+ if (H5Sclose(sid2) < 0)
+ goto out;
+ if (H5Dclose(did2) < 0)
+ goto out;
+
+ retval = 0;
+
+out:
+ if(wbuf)
+ HDfree(wbuf);
+ if(dwbuf)
+ HDfree(dwbuf);
+
+ H5E_BEGIN_TRY
+ {
+ H5Sclose(sid1);
+ H5Sclose(sid2);
+ H5Dclose(did1);
+ H5Dclose(did2);
+ } H5E_END_TRY;
+
+ return retval;
+}
+
+/*-------------------------------------------------------------------------
+* Function: write_attr_in
+*
+* Purpose: write attributes in LOC_ID (dataset, group, named datatype)
+*
+* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+*
+* Date: November 12, 2003
+*
+*-------------------------------------------------------------------------
+*/
+
+static
+int write_attr_in(hid_t loc_id,
+ const char* dset_name, /* for saving reference to dataset*/
+ hid_t fid, /* for reference create */
+ int make_diffs /* flag to modify data buffers */)
+{
+ /* Compound datatype */
+ typedef struct s_t
+ {
+ char a;
+ double b;
+ } s_t;
+
+ typedef enum
+ {
+ RED,
+ GREEN
+ } e_t;
+
+ hid_t aid = -1;
+ hid_t sid = -1;
+ hid_t tid = -1;
+ int val, j, k, n;
+ unsigned i;
+ float f;
+
+ /* create 1D attributes with dimension [2], 2 elements */
+ hsize_t dims[1]={2};
+ char buf1[2][3]= {"ab","de"}; /* string */
+ char buf2[2]= {1,2}; /* bitfield, opaque */
+ s_t buf3[2]= {{1,2},{3,4}}; /* compound */
+ hobj_ref_t buf4[2]; /* reference */
+ e_t buf45[2]= {RED,RED}; /* enum */
+ hvl_t buf5[2]; /* vlen */
+ hsize_t dimarray[1]={3}; /* array dimension */
+ int buf6[2][3]= {{1,2,3},{4,5,6}}; /* array */
+ int buf7[2]= {1,2}; /* integer */
+ float buf8[2]= {1,2}; /* float */
+
+ /* create 2D attributes with dimension [3][2], 6 elements */
+ hsize_t dims2[2]={3,2};
+ char buf12[6][3]= {"ab","cd","ef","gh","ij","kl"}; /* string */
+ char buf22[3][2]= {{1,2},{3,4},{5,6}}; /* bitfield, opaque */
+ s_t buf32[6]= {{1,2},{3,4},{5,6},{7,8},{9,10},{11,12}}; /* compound */
+ hobj_ref_t buf42[3][2]; /* reference */
+ e_t buf452[3][2]; /* enum */
+ hvl_t buf52[3][2]; /* vlen */
+ int buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}}; /* array */
+ int buf72[3][2]= {{1,2},{3,4},{5,6}}; /* integer */
+ float buf82[3][2]= {{1,2},{3,4},{5,6}}; /* float */
+
+ /* create 3D attributes with dimension [4][3][2], 24 elements */
+ hsize_t dims3[3]={4,3,2};
+ char buf13[24][3]= {"ab","cd","ef","gh","ij","kl","mn","pq",
+ "rs","tu","vw","xz","AB","CD","EF","GH",
+ "IJ","KL","MN","PQ","RS","TU","VW","XZ"}; /* string */
+ char buf23[4][3][2]; /* bitfield, opaque */
+ s_t buf33[4][3][2]; /* compound */
+ hobj_ref_t buf43[4][3][2]; /* reference */
+ e_t buf453[4][3][2]; /* enum */
+ hvl_t buf53[4][3][2]; /* vlen */
+ int buf63[24][3]; /* array */
+ int buf73[4][3][2]; /* integer */
+ float buf83[4][3][2]; /* float */
+
+
+ /*-------------------------------------------------------------------------
+ * 1D attributes
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ for (i=0; i<2; i++)
+ for (j=0; j<2; j++)
+ {
+ buf1[i][j]='z';
+ }
+ }
+ /*
+ buf1[2][2]= {"ab","de"};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <string> and <string>
+ position string of </g1> string of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] a z
+ [ 0 ] b z
+ [ 1 ] d z
+ [ 1 ] e z
+ */
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"string",tid,buf1) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ for (i=0; i<2; i++)
+ buf2[i]=buf2[1]=0;
+ }
+ /*
+ buf2[2]= {1,2};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <bitfield> and <bitfield>
+ position bitfield of </g1> bitfield of </g1> difference
+ position opaque of </g1> opaque of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 1 ] 2 0 2
+ */
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"bitfield",tid,buf2) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+
+ /*
+ buf2[2]= {1,2};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <opaque> and <opaque>
+ position opaque of </g1> opaque of </g1> difference
+ position opaque of </g1> opaque of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 1 ] 2 0 2
+ */
+
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"opaque",tid,buf2) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ for (i=0; i<2; i++)
+ {
+ buf3[i].a=0; buf3[i].b=0;
+ }
+ }
+
+ /*
+ buf3[2]= {{1,2},{3,4}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <compound> and <compound>
+ position compound of </g1> compound of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 5 4
+ [ 0 ] 2 5 3
+ [ 1 ] 3 5 2
+ [ 1 ] 4 5 1
+ */
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"compound",tid,buf3) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* object references ( H5R_OBJECT */
+ if (dset_name)
+ {
+ if (H5Rcreate(&buf4[0],fid,dset_name,H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ if (H5Rcreate(&buf4[1],fid,dset_name,H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"reference",H5T_STD_REF_OBJ,buf4) < 0)
+ goto out;
+ }
+
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+ if (make_diffs)
+ {
+ for (i=0; i<2; i++)
+ {
+ buf45[i]=GREEN;
+ }
+ }
+ /*
+ buf45[2]= {RED,RED};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <enum> and <enum>
+ position enum of </g1> enum of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] RED GREEN
+ [ 1 ] RED GREEN
+ */
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"enum",tid,buf45) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+
+ buf5[0].len = 1;
+ buf5[0].p = HDmalloc( 1 * sizeof(int));
+ ((int *)buf5[0].p)[0]=1;
+ buf5[1].len = 2;
+ buf5[1].p = HDmalloc(2 * sizeof(int));
+ ((int *)buf5[1].p)[0] = 2;
+ ((int *)buf5[1].p)[1] = 3;
+
+ if(make_diffs)
+ {
+ ((int *)buf5[0].p)[0] = 0;
+ ((int *)buf5[1].p)[0] = 0;
+ ((int *)buf5[1].p)[1] = 0;
+ }
+ /*
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ position vlen of </g1> vlen of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 1 ] 2 0 2
+ [ 1 ] 3 0 3
+ */
+
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((aid = H5Acreate2(loc_id, "vlen", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Awrite(aid, tid, buf5) < 0)
+ goto out;
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf5) < 0)
+ goto out;
+ if (H5Aclose(aid) < 0)
+ goto out;
+ aid = -1;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+ if (H5Sclose(sid) < 0)
+ goto out;
+ sid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ for (i=0; i<2; i++)
+ for (j=0; j<3; j++)
+ {
+ buf6[i][j]=0;
+ }
+ }
+ /*
+ buf6[2][3]= {{1,2,3},{4,5,6}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <array> and <array>
+ position array of </g1> array of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 0 ] 2 0 2
+ [ 0 ] 3 0 3
+ [ 1 ] 4 0 4
+ [ 1 ] 5 0 5
+ [ 1 ] 6 0 6
+ */
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (make_attr(loc_id, 1, dims, "array", tid, buf6) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER and H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs)
+ {
+ for(i = 0; i < 2; i++)
+ {
+ buf7[i]=0;
+ buf8[i]=0;
+ }
+ }
+
+ /*
+ buf7[2]= {1,2};
+ buf8[2]= {1,2};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ position integer of </g1> integer of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 1 ] 2 0 2
+ position float of </g1> float of </g1> difference
+ ------------------------------------------------------------
+ [ 0 ] 1 0 1
+ [ 1 ] 2 0 2
+ */
+ if (make_attr(loc_id,1,dims,"integer",H5T_NATIVE_INT,buf7) < 0)
+ goto out;
+ if (make_attr(loc_id,1,dims,"float",H5T_NATIVE_FLOAT,buf8) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * 2D attributes
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+ if (make_diffs)
+ {
+ HDmemset(buf12, 'z', sizeof buf12);
+ }
+
+ /*
+ buf12[6][2]= {"ab","cd","ef","gh","ij","kl"};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Attribute: <string2D> and <string2D>
+ position string2D of </g1> string2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] a z
+ [ 0 0 ] b z
+ [ 0 1 ] c z
+ [ 0 1 ] d z
+ [ 1 0 ] e z
+ [ 1 0 ] f z
+ [ 1 1 ] g z
+ [ 1 1 ] h z
+ [ 2 0 ] i z
+ [ 2 0 ] j z
+ [ 2 1 ] k z
+ [ 2 1 ] l z
+ */
+
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"string2D",tid,buf12) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf22,0,sizeof buf22);
+ }
+
+ /*
+ buf22[3][2]= {{1,2},{3,4},{5,6}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Attribute: <bitfield2D> and <bitfield2D>
+ position bitfield2D of </g1> bitfield2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 1 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 2 0 ] 5 0 5
+ [ 2 1 ] 6 0 6
+ */
+
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"bitfield2D",tid,buf22) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+
+ /*
+ buf22[3][2]= {{1,2},{3,4},{5,6}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Attribute: <opaque2D> and <opaque2D>
+ position opaque2D of </g1> opaque2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 1 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 2 0 ] 5 0 5
+ [ 2 1 ] 6 0 6
+ */
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"opaque2D",tid,buf22) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+ if (make_diffs)
+ {
+ HDmemset(buf32,0,sizeof buf32);
+ }
+
+ /*
+ buf32[6]= {{1,2},{3,4},{5,6},{7,8},{9,10},{11,12}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Attribute: <opaque2D> and <opaque2D>
+ position opaque2D of </g1> opaque2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 1 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 2 0 ] 5 0 5
+ [ 2 1 ] 6 0 6
+ */
+
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"compound2D",tid,buf32) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* Create references to dataset */
+ if (dset_name)
+ {
+ for (i = 0; i < 3; i++)
+ {
+ for (j = 0; j < 2; j++)
+ {
+ if (H5Rcreate(&buf42[i][j],fid,dset_name,H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ }
+ }
+ if (make_attr(loc_id,2,dims2,"reference2D",H5T_STD_REF_OBJ,buf42) < 0)
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+ for (i=0; i<3; i++)
+ {
+ for (j=0; j<2; j++)
+ {
+ if (make_diffs) buf452[i][j]=GREEN; else buf452[i][j]=RED;
+ }
+ }
+
+ /*
+ Attribute: <enum2D> and <enum2D>
+ position enum2D of </g1> enum2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] RED GREEN
+ [ 0 1 ] RED GREEN
+ [ 1 0 ] RED GREEN
+ [ 1 1 ] RED GREEN
+ [ 2 0 ] RED GREEN
+ [ 2 1 ] RED GREEN
+ */
+
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"enum2D",tid,buf452) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+ n=0;
+ for(i = 0; i < 3; i++) {
+ for(j = 0; j < 2; j++) {
+ unsigned l;
+
+ buf52[i][j].p = HDmalloc((i + 1) * sizeof(int));
+ buf52[i][j].len = (size_t)(i + 1);
+ for(l = 0; l < i + 1; l++)
+ if(make_diffs)
+ ((int *)buf52[i][j].p)[l] = 0;
+ else
+ ((int *)buf52[i][j].p)[l] = n++;
+ }
+ }
+
+ /*
+ position vlen2D of </g1> vlen2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 1 ] 1 0 1
+ [ 1 0 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 1 1 ] 5 0 5
+ [ 2 0 ] 6 0 6
+ [ 2 0 ] 7 0 7
+ [ 2 0 ] 8 0 8
+ [ 2 1 ] 9 0 9
+ [ 2 1 ] 10 0 10
+ [ 2 1 ] 11 0 11
+ */
+
+ if ((sid = H5Screate_simple(2, dims2, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((aid = H5Acreate2(loc_id, "vlen2D", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Awrite(aid, tid, buf52) < 0)
+ goto out;
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf52) < 0)
+ goto out;
+ if (H5Aclose(aid) < 0)
+ goto out;
+ aid = -1;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+ if (H5Sclose(sid) < 0)
+ goto out;
+ sid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf62,0,sizeof buf62);
+ }
+ /*
+ buf62[6][3]= {{1,2,3},{4,5,6},{7,8,9},{10,11,12},{13,14,15},{16,17,18}};
+ $h5diff file7.h5 file6.h5 g1 g1 -v
+ Group: </g1> and </g1>
+ Attribute: <array2D> and <array2D>
+ position array2D of </g1> array2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 0 ] 2 0 2
+ [ 0 0 ] 3 0 3
+ [ 0 1 ] 4 0 4
+ [ 0 1 ] 5 0 5
+ [ 0 1 ] 6 0 6
+ [ 1 0 ] 7 0 7
+ [ 1 0 ] 8 0 8
+ [ 1 0 ] 9 0 9
+ [ 1 1 ] 10 0 10
+ [ 1 1 ] 11 0 11
+ [ 1 1 ] 12 0 12
+ [ 2 0 ] 13 0 13
+ [ 2 0 ] 14 0 14
+ [ 2 0 ] 15 0 15
+ [ 2 1 ] 16 0 16
+ [ 2 1 ] 17 0 17
+ [ 2 1 ] 18 0 18
+ */
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (make_attr(loc_id, 2, dims2, "array2D", tid, buf62) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER and H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+
+ if(make_diffs)
+ {
+ HDmemset(buf72, 0, sizeof buf72);
+ HDmemset(buf82, 0, sizeof buf82);
+ }
+ /*
+ Attribute: <integer2D> and <integer2D>
+ position integer2D of </g1> integer2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 1 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 2 0 ] 5 0 5
+ [ 2 1 ] 6 0 6
+ 6 differences found
+ Attribute: <float2D> and <float2D>
+ position float2D of </g1> float2D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 ] 1 0 1
+ [ 0 1 ] 2 0 2
+ [ 1 0 ] 3 0 3
+ [ 1 1 ] 4 0 4
+ [ 2 0 ] 5 0 5
+ [ 2 1 ] 6 0 6
+ */
+
+ if (make_attr(loc_id,2,dims2,"integer2D",H5T_NATIVE_INT,buf72) < 0)
+ goto out;
+ if (make_attr(loc_id,2,dims2,"float2D",H5T_NATIVE_FLOAT,buf82) < 0)
+ goto out;
+
+
+ /*-------------------------------------------------------------------------
+ * 3D attributes
+ *-------------------------------------------------------------------------
+ */
+
+ /*-------------------------------------------------------------------------
+ * H5T_STRING
+ *-------------------------------------------------------------------------
+ */
+
+ if (make_diffs)
+ {
+ HDmemset(buf13,'z',sizeof buf13);
+ }
+
+ /*
+ buf13[24][2]= {"ab","cd","ef","gh","ij","kl","mn","pq",
+ "rs","tu","vw","xz","AB","CD","EF","GH",
+ "IJ","KL","MN","PQ","RS","TU","VW","XZ"};
+
+ Attribute: <string3D> and <string3D>
+ position string3D of </g1> string3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] a z
+ [ 0 0 0 ] b z
+ [ 0 0 1 ] c z
+ [ 0 0 1 ] d z
+ [ 0 1 0 ] e z
+ [ 0 1 0 ] f z
+ [ 0 1 1 ] g z
+ [ 0 1 1 ] h z
+ [ 0 2 0 ] i z
+ [ 0 2 0 ] j z
+ [ 0 2 1 ] k z
+ [ 0 2 1 ] l z
+ [ 1 0 0 ] m z
+ [ 1 0 0 ] n z
+ [ 1 0 1 ] p z
+ [ 1 0 1 ] q z
+ [ 1 1 0 ] r z
+ [ 1 1 0 ] s z
+ [ 1 1 1 ] t z
+ [ 1 1 1 ] u z
+ [ 1 2 0 ] v z
+ [ 1 2 0 ] w z
+ [ 1 2 1 ] x z
+ [ 2 0 0 ] A z
+ [ 2 0 0 ] B z
+ [ 2 0 1 ] C z
+ [ 2 0 1 ] D z
+ [ 2 1 0 ] E z
+ [ 2 1 0 ] F z
+ [ 2 1 1 ] G z
+ [ 2 1 1 ] H z
+ [ 2 2 0 ] I z
+ [ 2 2 0 ] J z
+ [ 2 2 1 ] K z
+ [ 2 2 1 ] L z
+ [ 3 0 0 ] M z
+ [ 3 0 0 ] N z
+ [ 3 0 1 ] P z
+ [ 3 0 1 ] Q z
+ [ 3 1 0 ] R z
+ [ 3 1 0 ] S z
+ [ 3 1 1 ] T z
+ [ 3 1 1 ] U z
+ [ 3 2 0 ] V z
+ [ 3 2 0 ] W z
+ [ 3 2 1 ] X z
+ [ 3 2 1 ] Z z
+ */
+
+ if ((tid = H5Tcopy(H5T_C_S1)) < 0)
+ goto out;
+ if (H5Tset_size(tid, (size_t)2) < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"string3D",tid,buf13) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_BITFIELD
+ *-------------------------------------------------------------------------
+ */
+
+ n=1;
+ for(i = 0; i < 4; i++) {
+ for(j = 0; j < 3; j++) {
+ for(k = 0; k < 2; k++) {
+ if(make_diffs)
+ buf23[i][j][k] = 0;
+ else
+ buf23[i][j][k] = (char)(n++);
+ }
+ }
+ }
+
+ /*
+ position bitfield3D of </g1> bitfield3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] 1 0 1
+ [ 0 0 1 ] 2 0 2
+ [ 0 1 0 ] 3 0 3
+ [ 0 1 1 ] 4 0 4
+ [ 0 2 0 ] 5 0 5
+ [ 0 2 1 ] 6 0 6
+ [ 1 0 0 ] 7 0 7
+ [ 1 0 1 ] 8 0 8
+ [ 1 1 0 ] 9 0 9
+ [ 1 1 1 ] 10 0 10
+ [ 1 2 0 ] 11 0 11
+ [ 1 2 1 ] 12 0 12
+ [ 2 0 0 ] 13 0 13
+ [ 2 0 1 ] 14 0 14
+ [ 2 1 0 ] 15 0 15
+ [ 2 1 1 ] 16 0 16
+ [ 2 2 0 ] 17 0 17
+ [ 2 2 1 ] 18 0 18
+ [ 3 0 0 ] 19 0 19
+ [ 3 0 1 ] 20 0 20
+ [ 3 1 0 ] 21 0 21
+ [ 3 1 1 ] 22 0 22
+ [ 3 2 0 ] 23 0 23
+ [ 3 2 1 ] 24 0 24
+ */
+
+ if ((tid = H5Tcopy(H5T_STD_B8LE)) < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"bitfield3D",tid,buf23) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_OPAQUE
+ *-------------------------------------------------------------------------
+ */
+ if ((tid = H5Tcreate(H5T_OPAQUE, (size_t)1)) < 0)
+ goto out;
+ if (H5Tset_tag(tid, "1-byte opaque type") < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"opaque3D",tid,buf23) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_COMPOUND
+ *-------------------------------------------------------------------------
+ */
+
+ n=1;
+ for(i = 0; i < 4; i++) {
+ for(j = 0; j < 3; j++) {
+ for(k = 0; k < 2; k++) {
+ if(make_diffs) {
+ buf33[i][j][k].a = 0;
+ buf33[i][j][k].b = 0;
+ }
+ else {
+ buf33[i][j][k].a = (char)(n++);
+ buf33[i][j][k].b = n++;
+ }
+ }
+ }
+ }
+ /*position compound3D of </g1> compound3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] 1 0 1
+ [ 0 0 0 ] 2 0 2
+ [ 0 0 1 ] 3 0 3
+ [ 0 0 1 ] 4 0 4
+ [ 0 1 0 ] 5 0 5
+ [ 0 1 0 ] 6 0 6
+ [ 0 1 1 ] 7 0 7
+ [ 0 1 1 ] 8 0 8
+ [ 0 2 0 ] 9 0 9
+ [ 0 2 0 ] 10 0 10
+ [ 0 2 1 ] 11 0 11
+ [ 0 2 1 ] 12 0 12
+ [ 1 0 0 ] 13 0 13
+ [ 1 0 0 ] 14 0 14
+ [ 1 0 1 ] 15 0 15
+ [ 1 0 1 ] 16 0 16
+ [ 1 1 0 ] 17 0 17
+ [ 1 1 0 ] 18 0 18
+ [ 1 1 1 ] 19 0 19
+ [ 1 1 1 ] 20 0 20
+ [ 1 2 0 ] 21 0 21
+ [ 1 2 0 ] 22 0 22
+ [ 1 2 1 ] 23 0 23
+ [ 1 2 1 ] 24 0 24
+ [ 2 0 0 ] 25 0 25
+ [ 2 0 0 ] 26 0 26
+ [ 2 0 1 ] 27 0 27
+ [ 2 0 1 ] 28 0 28
+ [ 2 1 0 ] 29 0 29
+ [ 2 1 0 ] 30 0 30
+ [ 2 1 1 ] 31 0 31
+ [ 2 1 1 ] 32 0 32
+ [ 2 2 0 ] 33 0 33
+ [ 2 2 0 ] 34 0 34
+ [ 2 2 1 ] 35 0 35
+ [ 2 2 1 ] 36 0 36
+ [ 3 0 0 ] 37 0 37
+ [ 3 0 0 ] 38 0 38
+ [ 3 0 1 ] 39 0 39
+ [ 3 0 1 ] 40 0 40
+ [ 3 1 0 ] 41 0 41
+ [ 3 1 0 ] 42 0 42
+ [ 3 1 1 ] 43 0 43
+ [ 3 1 1 ] 44 0 44
+ [ 3 2 0 ] 45 0 45
+ [ 3 2 0 ] 46 0 46
+ [ 3 2 1 ] 47 0 47
+ [ 3 2 1 ] 48 0 48
+ */
+
+
+
+ if ((tid = H5Tcreate (H5T_COMPOUND, sizeof(s_t))) < 0)
+ goto out;
+ if (H5Tinsert(tid, "a", HOFFSET(s_t, a), H5T_NATIVE_CHAR) < 0)
+ goto out;
+ if (H5Tinsert(tid, "b", HOFFSET(s_t, b), H5T_NATIVE_DOUBLE) < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"compound3D",tid,buf33) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_REFERENCE
+ *-------------------------------------------------------------------------
+ */
+ /* Create references to dataset */
+ if (dset_name)
+ {
+ for (i = 0; i < 4; i++)
+ {
+ for (j = 0; j < 3; j++)
+ {
+ for (k = 0; k < 2; k++)
+ if (H5Rcreate(&buf43[i][j][k],fid,dset_name,H5R_OBJECT,(hid_t)-1) < 0)
+ goto out;
+ }
+ }
+ if (make_attr(loc_id,3,dims3,"reference3D",H5T_STD_REF_OBJ,buf43) < 0)
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------------
+ * H5T_ENUM
+ *-------------------------------------------------------------------------
+ */
+
+ for (i = 0; i < 4; i++)
+ {
+ for (j = 0; j < 3; j++)
+ {
+ for (k = 0; k < 2; k++)
+ {
+ if (make_diffs)
+ {
+ buf453[i][j][k]=RED;
+ }
+ else
+ {
+ buf453[i][j][k]=GREEN;
+ }
+ }
+ }
+ }
+
+ /*
+ position enum3D of </g1> enum3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] GREEN RED
+ [ 0 0 1 ] GREEN RED
+ [ 0 1 0 ] GREEN RED
+ [ 0 1 1 ] GREEN RED
+ [ 0 2 0 ] GREEN RED
+ [ 0 2 1 ] GREEN RED
+ [ 1 0 0 ] GREEN RED
+ [ 1 0 1 ] GREEN RED
+ [ 1 1 0 ] GREEN RED
+ [ 1 1 1 ] GREEN RED
+ [ 1 2 0 ] GREEN RED
+ [ 1 2 1 ] GREEN RED
+ [ 2 0 0 ] GREEN RED
+ [ 2 0 1 ] GREEN RED
+ [ 2 1 0 ] GREEN RED
+ [ 2 1 1 ] GREEN RED
+ [ 2 2 0 ] GREEN RED
+ [ 2 2 1 ] GREEN RED
+ [ 3 0 0 ] GREEN RED
+ [ 3 0 1 ] GREEN RED
+ [ 3 1 0 ] GREEN RED
+ [ 3 1 1 ] GREEN RED
+ [ 3 2 0 ] GREEN RED
+ [ 3 2 1 ] GREEN RED
+ */
+
+
+ if ((tid = H5Tcreate(H5T_ENUM, sizeof(e_t))) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "RED", (val = 0, &val)) < 0)
+ goto out;
+ if (H5Tenum_insert(tid, "GREEN", (val = 1, &val)) < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"enum3D",tid,buf453) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_VLEN
+ *-------------------------------------------------------------------------
+ */
+
+ /* Allocate and initialize VL dataset to write */
+ n=0;
+ for (i = 0; i < 4; i++)
+ {
+ for (j = 0; j < 3; j++)
+ {
+ for (k = 0; k < 2; k++)
+ {
+ unsigned l;
+
+ buf53[i][j][k].p = HDmalloc((i + 1) * sizeof(int));
+ buf53[i][j][k].len = (size_t)i + 1;
+ for (l = 0; l < i + 1; l++)
+ if (make_diffs)
+ ((int *)buf53[i][j][k].p)[l] = 0;
+ else
+ ((int *)buf53[i][j][k].p)[l] = n++;
+ }
+ }
+ }
+ /*
+ position vlen3D of </g1> vlen3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 1 ] 1 0 1
+ [ 0 1 0 ] 2 0 2
+ [ 0 1 1 ] 3 0 3
+ [ 0 2 0 ] 4 0 4
+ [ 0 2 1 ] 5 0 5
+ [ 1 0 0 ] 6 0 6
+ [ 1 0 0 ] 7 0 7
+ [ 1 0 1 ] 8 0 8
+ [ 1 0 1 ] 9 0 9
+ [ 1 1 0 ] 10 0 10
+ etc
+ */
+ if ((sid = H5Screate_simple(3, dims3, NULL)) < 0)
+ goto out;
+ if ((tid = H5Tvlen_create(H5T_NATIVE_INT)) < 0)
+ goto out;
+ if ((aid = H5Acreate2(loc_id, "vlen3D", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (H5Awrite(aid, tid, buf53) < 0)
+ goto out;
+ if (H5Dvlen_reclaim(tid, sid, H5P_DEFAULT, buf53) < 0)
+ goto out;
+ if (H5Aclose(aid) < 0)
+ goto out;
+ aid = -1;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+ if (H5Sclose(sid) < 0)
+ goto out;
+ sid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_ARRAY
+ *-------------------------------------------------------------------------
+ */
+ n=1;
+ for (i = 0; i < 24; i++)
+ {
+ for (j = 0; j < (int)dimarray[0]; j++)
+ {
+ if (make_diffs) buf63[i][j]=0;
+ else buf63[i][j]=n++;
+ }
+ }
+ /*
+ position array3D of </g1> array3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] 1 0 1
+ [ 0 0 0 ] 2 0 2
+ [ 0 0 0 ] 3 0 3
+ [ 0 0 1 ] 4 0 4
+ [ 0 0 1 ] 5 0 5
+ [ 0 0 1 ] 6 0 6
+ [ 0 1 0 ] 7 0 7
+ etc
+ */
+
+ if ((tid = H5Tarray_create2(H5T_NATIVE_INT, 1, dimarray)) < 0)
+ goto out;
+ if (make_attr(loc_id, 3, dims3, "array3D", tid, buf63) < 0)
+ goto out;
+ if (H5Tclose(tid) < 0)
+ goto out;
+ tid = -1;
+
+ /*-------------------------------------------------------------------------
+ * H5T_INTEGER and H5T_FLOAT
+ *-------------------------------------------------------------------------
+ */
+ n = 1; f = 1;
+ for(i = 0; i < 4; i++)
+ {
+ for(j = 0; j < 3; j++)
+ {
+ for(k = 0; k < 2; k++)
+ {
+ if(make_diffs)
+ {
+ buf73[i][j][k] = 0;
+ buf83[i][j][k] = 0;
+ }
+ else
+ {
+ buf73[i][j][k] = n++;
+ buf83[i][j][k] = f++;
+ }
+ }
+ }
+ }
+
+ /*
+ position integer3D of </g1> integer3D of </g1> difference
+ ------------------------------------------------------------
+ [ 0 0 0 ] 1 0 1
+ [ 0 0 1 ] 2 0 2
+ [ 0 1 0 ] 3 0 3
+ [ 0 1 1 ] 4 0 4
+ [ 0 2 0 ] 5 0 5
+ [ 0 2 1 ] 6 0 6
+ [ 1 0 0 ] 7 0 7
+ [ 1 0 1 ] 8 0 8
+ [ 1 1 0 ] 9 0 9
+ [ 1 1 1 ] 10 0 10
+ etc
+ */
+ if (make_attr(loc_id,3,dims3,"integer3D",H5T_NATIVE_INT,buf73) < 0)
+ goto out;
+ if (make_attr(loc_id,3,dims3,"float3D",H5T_NATIVE_FLOAT,buf83) < 0)
+ goto out;
+
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Aclose(aid);
+ H5Sclose(sid);
+ H5Tclose(tid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_dset
+*
+* Purpose: utility function to create and write a dataset in LOC_ID
+*
+* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+*
+* Date: November 12, 2003
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_dset(hid_t loc_id,
+ const char *name,
+ hid_t sid,
+ hid_t dcpl,
+ void *buf)
+{
+ hid_t did=-1;
+
+ if ((did = H5Dcreate2(loc_id, name, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0)
+ return -1;
+ if (H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
+ goto out;
+ if (H5Dclose(did) < 0)
+ return -1;
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Dclose(did);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: write_dset
+*
+* Purpose: utility function to create and write a dataset in LOC_ID
+*
+* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+*
+* Date: November 12, 2003
+*
+*-------------------------------------------------------------------------
+*/
+static
+int write_dset( hid_t loc_id,
+ int rank,
+ hsize_t *dims,
+ const char *dset_name,
+ hid_t tid,
+ void *buf )
+{
+ hid_t did=-1;
+ hid_t sid=-1;
+
+ if ((sid = H5Screate_simple(rank, dims, NULL)) < 0)
+ return -1;
+ if ((did = H5Dcreate2(loc_id, dset_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if (buf)
+ {
+ if(H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0)
+ goto out;
+ }
+ if (H5Dclose(did) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Dclose(did);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+
+/*-------------------------------------------------------------------------
+* Function: make_attr
+*
+* Purpose: utility function to write an attribute in LOC_ID
+*
+* Programmer: Pedro Vicente, pvn@ncsa.uiuc.edu
+*
+* Date: November 12, 2003
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_attr(hid_t loc_id,
+ int rank,
+ hsize_t *dims,
+ const char *attr_name,
+ hid_t tid,
+ void *buf)
+{
+ hid_t aid;
+ hid_t sid;
+
+ if ((sid = H5Screate_simple(rank, dims, NULL)) < 0)
+ return -1;
+ if ((aid = H5Acreate2(loc_id, attr_name, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(buf)
+ {
+ if(H5Awrite(aid, tid, buf) < 0)
+ goto out;
+ }
+ if (H5Aclose(aid) < 0)
+ goto out;
+ if (H5Sclose(sid) < 0)
+ goto out;
+ return 0;
+
+out:
+ H5E_BEGIN_TRY {
+ H5Aclose(aid);
+ H5Sclose(sid);
+ } H5E_END_TRY;
+ return -1;
+}
+
+
+/*-------------------------------------------------------------------------
+* Function: make_named_dtype
+*
+* Purpose: create a file with named datatypes in various configurations
+*
+*-------------------------------------------------------------------------
+*/
+static
+int make_named_dtype(hid_t loc_id)
+{
+ hsize_t dims[1] ={3};
+ hid_t did=-1;
+ hid_t aid=-1;
+ hid_t sid=-1;
+ hid_t tid=-1;
+ hid_t gid=-1;
+
+ if ((sid = H5Screate_simple(1, dims, NULL)) < 0)
+ goto out;
+
+ /* Create a dataset with an anonymous committed datatype as the first thing
+ * h5repack sees */
+ if((tid = H5Tcopy(H5T_STD_I16LE)) < 0)
+ goto out;
+ if(H5Tcommit_anon(loc_id, tid, H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+ if ((did = H5Dcreate2(loc_id, "A", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Tclose(tid) < 0)
+ goto out;
+
+ /* Create an attribute on that dataset that uses a committed datatype in
+ * a remote group */
+ if((gid = H5Gcreate2(loc_id, "M", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Gclose(gid) < 0)
+ goto out;
+ if((gid = H5Gcreate2(loc_id, "M/M", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Gclose(gid) < 0)
+ goto out;
+ if((tid = H5Tcopy(H5T_STD_I16BE)) < 0)
+ goto out;
+ if(H5Tcommit2(loc_id, "/M/M/A", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+ if((aid = H5Acreate2(did, "A", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Aclose(aid) < 0)
+ goto out;
+ if(H5Tclose(tid) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ /* Create a dataset in the remote group that uses a committed datatype in
+ * the root group */
+ if((tid = H5Tcopy(H5T_STD_I32LE)) < 0)
+ goto out;
+ if(H5Tcommit2(loc_id, "N", tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+ if((did = H5Dcreate2(loc_id, "M/M/B", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Tclose(tid) < 0)
+ goto out;
+
+ /* Create an attribute on the remote dataset that uses an anonymous
+ * committed datatype */
+ if((tid = H5Tcopy(H5T_STD_I32BE)) < 0)
+ goto out;
+ if(H5Tcommit_anon(loc_id, tid, H5P_DEFAULT, H5P_DEFAULT) < 0)
+ goto out;
+ if((aid = H5Acreate2(did, "A", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Aclose(aid) < 0)
+ goto out;
+
+ /* Create another attribute that uses the same anonymous datatype */
+ if((aid = H5Acreate2(did, "B", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Aclose(aid) < 0)
+ goto out;
+ if(H5Tclose(tid) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ /* Create a dataset in the root group that uses the committed datatype in
+ * the root group */
+ if((tid = H5Topen2(loc_id, "N", H5P_DEFAULT)) < 0)
+ goto out;
+ if((did = H5Dcreate2(loc_id, "O", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Dclose(did) < 0)
+ goto out;
+
+ /* Create 2 attributes on the committed datatype that use that datatype */
+ if((aid = H5Acreate2(tid, "A", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Aclose(aid) < 0)
+ goto out;
+ if((aid = H5Acreate2(tid, "B", tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0)
+ goto out;
+ if(H5Aclose(aid) < 0)
+ goto out;
+ if(H5Tclose(tid) < 0)
+ goto out;
+
+ /* Close */
+ if (H5Sclose(sid) < 0)
+ goto out;
+
+ return 0;
+
+out:
+ H5E_BEGIN_TRY
+ {
+ H5Tclose(tid);
+ H5Aclose(aid);
+ H5Sclose(sid);
+ H5Dclose(did);
+ H5Gclose(gid);
+ } H5E_END_TRY;
+ return -1;
+} /* end make_named_dtype() */
+
+/*-------------------------------------------------------------------------
+ * Function: add_attr_with_objref
+ *
+ * Purpose:
+ * Create attributes with object reference to objects (dset,
+ * group, datatype).
+ *
+ * Note:
+ * this function depends on locally created objects, however can be modified
+ * to be independent as necessary
+ *
+ * Programmer: Jonathan Kim (March 23, 2010)
+ *------------------------------------------------------------------------*/
+static herr_t add_attr_with_objref(hid_t file_id, hid_t obj_id)
+{
+ int ret = SUCCEED;
+ int status;
+ /* attr obj ref */
+ hsize_t dim_attr_objref[1]={3};
+ hobj_ref_t data_attr_objref[3];
+
+ /* --------------------------------
+ * add attribute with obj ref type
+ */
+ /* ref to dset */
+ status = H5Rcreate(&data_attr_objref[0],file_id,NAME_OBJ_DS1,H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* ref to group */
+ status = H5Rcreate(&data_attr_objref[1],file_id,NAME_OBJ_GRP,H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* ref to datatype */
+ status = H5Rcreate(&data_attr_objref[2],file_id,NAME_OBJ_NDTYPE,H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create attr with obj ref type */
+ status = make_attr(obj_id,1,dim_attr_objref,"Attr_OBJREF",H5T_STD_REF_OBJ,data_attr_objref);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> make_attr failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+
+ return ret;
+
+}
+
+/*-------------------------------------------------------------------------
+ * Function: add_attr_with_regref
+ *
+ * Purpose:
+ * Create attributes with region reference to dset
+ *
+ * Note:
+ * this function depends on locally created objects, however can be modified
+ * to be independent as necessary
+ *
+ * Programmer: Jonathan Kim (March 23, 2010)
+ *------------------------------------------------------------------------*/
+static herr_t add_attr_with_regref(hid_t file_id, hid_t obj_id)
+{
+ int ret = SUCCEED;
+ int status;
+
+ /* attr region ref */
+ hid_t sid_regrefed_dset=0;
+ hsize_t dim_regrefed_dset[2]={3,6};
+ hsize_t coords_regrefed_dset[3][2] = {{0,1},{1,2},{2,3}};
+ hsize_t dim_attr_regref[1]= {1}; /* dim of */
+ hdset_reg_ref_t data_attr_regref[1];
+
+
+ /* -----------------------------------
+ * add attribute with region ref type
+ */
+ sid_regrefed_dset = H5Screate_simple (2, dim_regrefed_dset, NULL);
+ if (sid_regrefed_dset < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* select elements space for reference */
+ status = H5Sselect_elements (sid_regrefed_dset, H5S_SELECT_SET, (size_t)3, coords_regrefed_dset[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Sselect_elements failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create region reference from elements space */
+ status = H5Rcreate (&data_attr_regref[0], file_id, NAME_OBJ_DS2, H5R_DATASET_REGION, sid_regrefed_dset);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create attr with region ref type */
+ status = make_attr(obj_id,1,dim_attr_regref,"Attr_REGREF",H5T_STD_REF_DSETREG,data_attr_regref);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> make_attr failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+ if (sid_regrefed_dset > 0)
+ H5Sclose (sid_regrefed_dset);
+
+ return ret;
+
+}
+
+/*-------------------------------------------------------------------------
+ * Function: gen_refered_objs
+ *
+ * Purpose:
+ * Create objects (dataset, group, datatype) to be referenced
+ *
+ * Note:
+ * This function is to use along with gen_obj_ref() gen_region_ref()
+ *
+ * Programmer: Jonathan Kim (March 23, 2010)
+ *------------------------------------------------------------------------*/
+static herr_t gen_refered_objs(hid_t loc_id)
+{
+ int status;
+ herr_t ret = SUCCEED;
+
+ /* objects (dset, group, datatype) */
+ hid_t sid=0, did1=0, gid=0, tid=0;
+ hsize_t dims1[1]={3};
+ int data[3] = {10,20,30};
+
+ /* Dset2 */
+ hid_t sid2=0, did2=0;
+ hsize_t dims2[2] = {3,16};
+ char data2[3][16] = {"The quick brown", "fox jumps over ", "the 5 lazy dogs"};
+
+ /*-----------------------
+ * add short dataset
+ * (define NAME_OBJ_DS1)
+ */
+ sid = H5Screate_simple(1, dims1, NULL);
+ if (sid < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ did1 = H5Dcreate2 (loc_id, NAME_OBJ_DS1, H5T_NATIVE_INT, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ if (did1 < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ status = H5Dwrite(did1, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*--------------
+ * add group
+ * (define NAME_OBJ_GRP)
+ */
+ gid = H5Gcreate2 (loc_id, NAME_OBJ_GRP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ if (gid < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Gcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*----------------------
+ * add named datatype
+ * (define NAME_OBJ_NDTYPE)
+ */
+ tid = H5Tcopy(H5T_NATIVE_INT);
+ status = H5Tcommit2(loc_id, NAME_OBJ_NDTYPE, tid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Tcommit2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+
+ /*--------------------------
+ * create long dataset
+ * (define NAME_OBJ_DS2)
+ */
+ sid2 = H5Screate_simple (2, dims2, NULL);
+ if (sid2 < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create normal dataset which is refered */
+ did2 = H5Dcreate2 (loc_id, NAME_OBJ_DS2, H5T_STD_I8LE, sid2, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT);
+ if (did2 < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* write values to dataset */
+ status = H5Dwrite (did2, H5T_NATIVE_CHAR, H5S_ALL, H5S_ALL, H5P_DEFAULT, data2);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+ if(did1 > 0)
+ H5Dclose(did1);
+ if(gid > 0)
+ H5Gclose(gid);
+ if(tid > 0)
+ H5Tclose(tid);
+ if(sid > 0)
+ H5Sclose(sid);
+
+ if(did2 > 0)
+ H5Dclose(did2);
+ if(sid2 > 0)
+ H5Sclose(sid2);
+ return ret;
+
+}
+
+/*-------------------------------------------------------------------------
+ * Function: gen_obj_ref
+ *
+ * Purpose:
+ * Generate object references to objects (dataset,group and named datatype)
+ *
+ * Note:
+ * copied from h5copygentest.c and upate to create named datatype
+ *
+ * Programmer: Jonathan Kim (March 18, 2010)
+ *------------------------------------------------------------------------*/
+static herr_t gen_obj_ref(hid_t loc_id)
+{
+ int status;
+ herr_t ret = SUCCEED;
+
+ hid_t sid=0, oid=0;
+ hsize_t dims_dset_objref[1]={3};
+
+ /* attr with int type */
+ hsize_t dim_attr_int[1]={2};
+ int data_attr_int[2] = {10,20};
+
+ /* write buffer for obj reference */
+ hobj_ref_t objref_buf[3];
+
+ /*---------------------------------------------------------
+ * create obj references to the previously created objects.
+ * Passing -1 as reference is an object.*/
+
+ /* obj ref to dataset */
+ status = H5Rcreate (&objref_buf[0], loc_id, NAME_OBJ_DS1, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* obj ref to group */
+ status = H5Rcreate (&objref_buf[1], loc_id, NAME_OBJ_GRP, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* obj ref to named-datatype */
+ status = H5Rcreate (&objref_buf[2], loc_id, NAME_OBJ_NDTYPE, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*---------------------------------------------------------
+ * create dataset contain references
+ */
+ sid = H5Screate_simple (1, dims_dset_objref, NULL);
+ if (sid < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ oid = H5Dcreate2 (loc_id, "Dset_OBJREF", H5T_STD_REF_OBJ, sid, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT);
+ if (oid < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ status = H5Dwrite(oid, H5T_STD_REF_OBJ, H5S_ALL, H5S_ALL, H5P_DEFAULT, objref_buf);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* add attribute with int type */
+ if (make_attr(oid,1,dim_attr_int,"integer",H5T_NATIVE_INT,data_attr_int) < 0)
+ goto out;
+
+ /* add attribute with obj ref */
+ status = add_attr_with_objref(loc_id, oid);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> add_attr_with_objref failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* add attribute with region ref */
+ status = add_attr_with_regref(loc_id, oid);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> add_attr_with_regref failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+ if(oid > 0)
+ H5Dclose(oid);
+ if(sid > 0)
+ H5Sclose(sid);
+
+ return ret;
+}
+
+
+/*-------------------------------------------------------------------------
+ * Function: gen_region_ref
+ *
+ * Purpose: Generate dataset region references
+ *
+ * Note:
+ * copied from h5copygentest.c
+ *
+ * Programmer: Jonathan Kim (March 18, 2010)
+ *------------------------------------------------------------------------*/
+static herr_t gen_region_ref(hid_t loc_id)
+{
+ int status;
+ herr_t ret = SUCCEED;
+
+ /* target dataset */
+ hid_t sid_trg=0;
+ hsize_t dims_trg[2] = {3,16};
+
+ /* dset with region ref type */
+ hid_t sid_ref=0, oid_ref=0;
+
+ /* region ref to target dataset */
+ hsize_t coords[4][2] = { {0,1}, {2,11}, {1,0}, {2,4} };
+ hdset_reg_ref_t rr_data[2];
+ hsize_t start[2] = {0,0};
+ hsize_t stride[2] = {2,11};
+ hsize_t count[2] = {2,2};
+ hsize_t block[2] = {1,3};
+ hsize_t dims1[1] = {2};
+
+ /* attr with int type */
+ hsize_t dim_attr_int[1]={2};
+ int data_attr_int[2] = {10,20};
+
+ sid_trg = H5Screate_simple (2, dims_trg, NULL);
+ if (sid_trg < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* select elements space for reference */
+ status = H5Sselect_elements (sid_trg, H5S_SELECT_SET, (size_t)4, coords[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Sselect_elements failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create region reference from elements space */
+ status = H5Rcreate (&rr_data[0], loc_id, NAME_OBJ_DS2, H5R_DATASET_REGION, sid_trg);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* select hyperslab space for reference */
+ status = H5Sselect_hyperslab (sid_trg, H5S_SELECT_SET, start, stride, count, block);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Sselect_hyperslab failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create region reference from hyperslab space */
+ status = H5Rcreate (&rr_data[1], loc_id, NAME_OBJ_DS2, H5R_DATASET_REGION, sid_trg);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* Create dataspace. */
+ sid_ref = H5Screate_simple (1, dims1, NULL);
+ if (sid_ref < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Screate_simple failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* create region reference dataset */
+ oid_ref = H5Dcreate2 (loc_id, REG_REF_DS1, H5T_STD_REF_DSETREG, sid_ref, H5P_DEFAULT,H5P_DEFAULT,H5P_DEFAULT);
+ if (oid_ref < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* write data as region references */
+ status = H5Dwrite (oid_ref, H5T_STD_REF_DSETREG, H5S_ALL, H5S_ALL, H5P_DEFAULT, rr_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* add attribute with int type */
+ if (make_attr(oid_ref,1,dim_attr_int,"integer",H5T_NATIVE_INT,data_attr_int) < 0)
+ goto out;
+
+ /* add attribute with obj ref */
+ status = add_attr_with_objref(loc_id, oid_ref);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> add_attr_with_objref failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* add attribute with region ref */
+ status = add_attr_with_regref(loc_id, oid_ref);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> add_attr_with_regref failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+ if (oid_ref > 0)
+ H5Dclose (oid_ref);
+ if (sid_ref > 0)
+ H5Sclose (sid_ref);
+ if (sid_trg > 0)
+ H5Sclose (sid_trg);
+
+ return ret;
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_references
+*
+* Purpose: create a file with obj and region references
+*
+* Programmer: Jonathan Kim (March 18, 2010)
+*-------------------------------------------------------------------------
+*/
+static herr_t make_references(hid_t loc_id)
+{
+ herr_t ret = SUCCEED;
+ herr_t status;
+
+ /* add target objects */
+ status = gen_refered_objs(loc_id);
+ if (status == FAIL)
+ {
+ fprintf(stderr, "Failed to generate referenced object.\n");
+ ret = FAIL;
+ }
+
+ /* add object reference */
+ status = gen_obj_ref(loc_id);
+ if (status == FAIL)
+ {
+ fprintf(stderr, "Failed to generate object reference.\n");
+ ret = FAIL;
+ }
+
+ /* add region reference */
+ status = gen_region_ref(loc_id);
+ if (status == FAIL)
+ {
+ fprintf(stderr, "Failed to generate region reference.\n");
+ ret = FAIL;
+ }
+
+ return ret;
+}
+
+/*-------------------------------------------------------------------------
+* Function: make_complex_attr_references
+*
+* Purpose:
+* create a file with :
+* 1. obj ref in attribute of compound type
+* 2. region ref in attribute of compound type
+* 3. obj ref in attribute of vlen type
+* 4. region ref in attribute of vlen type
+*
+* Programmer: Jonathan (March 25, 2010)
+*-------------------------------------------------------------------------
+*/
+/* obj dset */
+#define RANK_OBJ 2
+#define DIM0_OBJ 6
+#define DIM1_OBJ 10
+/* container dset */
+#define RANK_DSET 1
+#define DIM_DSET 4
+/* 1. obj references in compound attr */
+#define RANK_COMP_OBJREF 1
+#define DIM_COMP_OBJREF 3 /* for dataset, group, datatype */
+/* 2. region references in compound attr */
+#define RANK_COMP_REGREF 1
+#define DIM_COMP_REGREF 1 /* for element region */
+/* 3. obj references in vlen attr */
+#define RANK_VLEN_OBJREF 1
+#define DIM_VLEN_OBJREF 3 /* for dataset, group, datatype */
+#define LEN0_VLEN_OBJREF 1 /* dataset */
+#define LEN1_VLEN_OBJREF 1 /* group */
+#define LEN2_VLEN_OBJREF 1 /* datatype */
+/* 4. region references in vlen attr */
+#define RANK_VLEN_REGREF 1
+#define DIM_VLEN_REGREF 1 /* for element region */
+#define LEN0_VLEN_REGREF 1 /* element region */
+
+static herr_t make_complex_attr_references(hid_t loc_id)
+{
+ herr_t ret = SUCCEED;
+ herr_t status;
+ /*
+ * for objects
+ */
+ hid_t objgid=0, objdid=0, objtid=0, objsid=0;
+ hsize_t obj_dims[RANK_OBJ] = {DIM0_OBJ, DIM1_OBJ};
+ int obj_data[DIM0_OBJ][DIM1_OBJ]=
+ {{ 0, 1, 2, 3, 4, 5, 6, 7, 8, 9},
+ {10,11,12,13,14,15,16,17,18,19},
+ {20,21,22,23,24,25,26,27,28,29},
+ {30,31,32,33,34,35,36,37,38,39},
+ {40,41,42,43,44,45,46,47,48,49},
+ {50,51,52,53,54,55,56,57,58,59}};
+
+ /*
+ * group main
+ */
+ hid_t main_gid=0;
+ /*
+ * dataset which the attribute will be attached to
+ */
+ hsize_t main_dset_dims[RANK_DSET] = {DIM_DSET};
+ hid_t main_sid=0, main_did=0;
+ /*
+ * 1. obj references in compound attr
+ */
+ hid_t comp_objref_tid=0, comp_objref_aid=0;
+ typedef struct comp_objref_t {
+ hobj_ref_t val_objref;
+ int val_int;
+ } comp_objref_t;
+ comp_objref_t comp_objref_data[DIM_COMP_OBJREF];
+ hid_t comp_objref_attr_sid=0;
+ hsize_t comp_objref_dim[RANK_COMP_OBJREF] = {DIM_COMP_OBJREF};
+
+ /*
+ * 2. region references in compound attr
+ */
+ hid_t comp_regref_tid=0, comp_regref_aid=0;
+ typedef struct comp_regref_t {
+ hdset_reg_ref_t val_regref;
+ int val_int;
+ } comp_regref_t;
+ comp_regref_t comp_regref_data[DIM_COMP_REGREF];
+ hid_t comp_regref_attr_sid=0;
+ hsize_t comp_regref_dim[RANK_COMP_REGREF] = {DIM_COMP_REGREF};
+ hsize_t coords[4][2] = { {0,1}, {2,3}, {3,4}, {4,5} };
+
+ /*
+ * 3. obj references in vlen attr
+ */
+ hid_t vlen_objref_attr_tid=0, vlen_objref_attr_sid=0;
+ hid_t vlen_objref_attr_id=0;
+ hvl_t vlen_objref_data[DIM_VLEN_OBJREF];
+ hsize_t vlen_objref_dims[RANK_VLEN_OBJREF] = {DIM_VLEN_OBJREF};
+
+ /*
+ * 4. region references in vlen attr
+ */
+ hid_t vlen_regref_attr_tid=0, vlen_regref_attr_sid=0;
+ hid_t vlen_regref_attr_id=0;
+ hvl_t vlen_regref_data[DIM_VLEN_REGREF];
+ hsize_t vlen_regref_dim[RANK_VLEN_REGREF] = {DIM_VLEN_REGREF};
+
+
+ /* ---------------------------------------
+ * create objects which to be referenced
+ */
+ /* object1 group */
+ objgid = H5Gcreate2(loc_id, NAME_OBJ_GRP, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+
+ /* object2 dataset */
+ objsid = H5Screate_simple(RANK_OBJ, obj_dims, NULL);
+ objdid = H5Dcreate2(loc_id, NAME_OBJ_DS1, H5T_NATIVE_INT, objsid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ status = H5Dwrite(objdid, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_data[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* object3 named datatype */
+ objtid = H5Tcopy(H5T_NATIVE_INT);
+ status = H5Tcommit2(loc_id, NAME_OBJ_NDTYPE, objtid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Tcommit2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+
+ /* ---------------------------------------------
+ * Put testing objs in this group
+ * create group contain dataset with attribute and the attribute has
+ * compound type which contain obj and region reference */
+ main_gid = H5Gcreate2(loc_id, "group_main", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT);
+ if (main_gid < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Gcreate2 failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*----------------------------------------------------------
+ * create dataset which the attribute will be attached to
+ */
+ main_sid = H5Screate_simple(RANK_DSET, main_dset_dims, NULL);
+
+ main_did = H5Dcreate2(main_gid, "dset_main", H5T_NATIVE_INT, main_sid, H5P_DEFAULT,H5P_DEFAULT, H5P_DEFAULT);
+
+ status = H5Dwrite(main_did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, obj_data[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dwrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------
+ * 1. create obj references in a attribute of compound type
+ */
+
+ /*
+ * create compound type for attribute
+ */
+ comp_objref_tid = H5Tcreate (H5T_COMPOUND, sizeof(comp_objref_t));
+
+ H5Tinsert(comp_objref_tid, "value_objref", HOFFSET(comp_objref_t, val_objref), H5T_STD_REF_OBJ);
+ H5Tinsert(comp_objref_tid, "value_int", HOFFSET(comp_objref_t, val_int), H5T_NATIVE_INT);
+
+ /*
+ * Create the object references into compound type
+ */
+ /* references to dataset */
+ status = H5Rcreate (&(comp_objref_data[0].val_objref), loc_id, NAME_OBJ_DS1, H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ comp_objref_data[0].val_int = 0;
+
+ /* references to group */
+ status = H5Rcreate (&(comp_objref_data[1].val_objref), loc_id, NAME_OBJ_GRP, H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ comp_objref_data[1].val_int = 10;
+
+ /* references to datatype */
+ status = H5Rcreate (&(comp_objref_data[2].val_objref), loc_id, NAME_OBJ_NDTYPE, H5R_OBJECT,(hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ comp_objref_data[2].val_int = 20;
+
+ /*
+ * create attribute and write the object ref
+ */
+ comp_objref_attr_sid = H5Screate_simple (RANK_COMP_OBJREF, comp_objref_dim, NULL);
+ comp_objref_aid = H5Acreate2 (main_did, "Comp_OBJREF", comp_objref_tid, comp_objref_attr_sid, H5P_DEFAULT, H5P_DEFAULT);
+ status = H5Awrite (comp_objref_aid, comp_objref_tid, comp_objref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Awrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------
+ * 2. create region references in attribute of compound type
+ */
+ /*
+ * create compound type for attribute
+ */
+ comp_regref_tid = H5Tcreate (H5T_COMPOUND, sizeof(comp_regref_t));
+
+ H5Tinsert(comp_regref_tid, "value_regref", HOFFSET(comp_regref_t, val_regref), H5T_STD_REF_DSETREG);
+ H5Tinsert(comp_regref_tid, "value_int", HOFFSET(comp_regref_t, val_int), H5T_NATIVE_INT);
+
+ /*
+ * create the region reference
+ */
+ status = H5Sselect_elements (objsid, H5S_SELECT_SET, (size_t)4, coords[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Sselect_elements failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ status = H5Rcreate (&(comp_regref_data[0].val_regref), loc_id, NAME_OBJ_DS1, H5R_DATASET_REGION, objsid);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ comp_regref_data[0].val_int = 10;
+
+ /*
+ * create attribute and write the region ref
+ */
+ comp_regref_attr_sid = H5Screate_simple (RANK_COMP_REGREF, comp_regref_dim, NULL);
+ comp_regref_aid = H5Acreate2 (main_did, "Comp_REGREF", comp_regref_tid, comp_regref_attr_sid, H5P_DEFAULT, H5P_DEFAULT);
+ status = H5Awrite (comp_regref_aid, comp_regref_tid, comp_regref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Awrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+
+ /*-------------------------------------------------------------------
+ * 3. create obj references in attribute of vlen type
+ */
+ /*
+ * prepare vlen data
+ */
+ vlen_objref_data[0].len = LEN0_VLEN_OBJREF;
+ vlen_objref_data[0].p = HDmalloc (vlen_objref_data[0].len * sizeof(hobj_ref_t));
+ vlen_objref_data[1].len = LEN1_VLEN_OBJREF;
+ vlen_objref_data[1].p = HDmalloc (vlen_objref_data[1].len * sizeof(hobj_ref_t));
+ vlen_objref_data[2].len = LEN2_VLEN_OBJREF;
+ vlen_objref_data[2].p = HDmalloc (vlen_objref_data[2].len * sizeof(hobj_ref_t));
+
+ /*
+ * create obj references
+ */
+ /* reference to dataset */
+ status = H5Rcreate (&((hobj_ref_t*)vlen_objref_data[0].p)[0], loc_id, NAME_OBJ_DS1, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ /* reference to group */
+ status = H5Rcreate (&((hobj_ref_t*)vlen_objref_data[1].p)[0], loc_id, NAME_OBJ_GRP, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ /* reference to datatype */
+ status = H5Rcreate (&((hobj_ref_t*)vlen_objref_data[2].p)[0], loc_id, NAME_OBJ_NDTYPE, H5R_OBJECT, (hid_t)-1);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*
+ * create vlen type with obj reference
+ */
+ vlen_objref_attr_tid = H5Tvlen_create (H5T_STD_REF_OBJ);
+ vlen_objref_attr_sid = H5Screate_simple (RANK_VLEN_OBJREF, vlen_objref_dims, NULL);
+
+ /*
+ * create attribute and write the object reference
+ */
+ vlen_objref_attr_id = H5Acreate2(main_did, "Vlen_OBJREF", vlen_objref_attr_tid, vlen_objref_attr_sid, H5P_DEFAULT, H5P_DEFAULT);
+ status = H5Awrite (vlen_objref_attr_id, vlen_objref_attr_tid, vlen_objref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Awrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* close resource for vlen data */
+ status = H5Dvlen_reclaim (vlen_objref_attr_tid, vlen_objref_attr_sid, H5P_DEFAULT, vlen_objref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dvlen_reclaim failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*-------------------------------------------------------------------
+ * 4. create region references in a attribute of vlen type
+ */
+
+ /*
+ * prepare vlen data
+ */
+ vlen_regref_data[0].len = LEN0_VLEN_REGREF;
+ vlen_regref_data[0].p = HDmalloc (vlen_regref_data[0].len * sizeof(hdset_reg_ref_t));
+
+ /*
+ * create region reference
+ */
+ status = H5Sselect_elements(objsid, H5S_SELECT_SET, (size_t)4, coords[0]);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Sselect_elements failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+ status = H5Rcreate (&((hdset_reg_ref_t*)vlen_regref_data[0].p)[0], loc_id, NAME_OBJ_DS1, H5R_DATASET_REGION, objsid);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Rcreate failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /*
+ * create vlen type with region reference
+ */
+ vlen_regref_attr_tid = H5Tvlen_create(H5T_STD_REF_DSETREG);
+ vlen_regref_attr_sid = H5Screate_simple(RANK_VLEN_REGREF, vlen_regref_dim, NULL);
+
+ /*
+ * create attribute and write the region reference
+ */
+ vlen_regref_attr_id = H5Acreate2(main_did, "Vlen_REGREF", vlen_regref_attr_tid, vlen_regref_attr_sid, H5P_DEFAULT, H5P_DEFAULT);
+ status = H5Awrite(vlen_regref_attr_id, vlen_regref_attr_tid, vlen_regref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Awrite failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+ /* close resource for vlen data */
+ status = H5Dvlen_reclaim (vlen_regref_attr_tid, vlen_regref_attr_sid, H5P_DEFAULT, vlen_regref_data);
+ if (status < 0)
+ {
+ fprintf(stderr, "Error: %s %d> H5Dvlen_reclaim failed.\n", FUNC, __LINE__);
+ ret = FAIL;
+ goto out;
+ }
+
+out:
+ /* release resources */
+ if (objgid > 0)
+ H5Gclose(objgid);
+ if (objsid > 0)
+ H5Sclose(objsid);
+ if (objdid > 0)
+ H5Dclose(objdid);
+ if (objtid > 0)
+ H5Tclose(objtid);
+
+ if (main_gid > 0)
+ H5Gclose(main_gid);
+ if (main_sid > 0)
+ H5Sclose(main_sid);
+ if (main_did > 0)
+ H5Dclose(main_did);
+ /* comp obj ref */
+ if (comp_objref_tid > 0)
+ H5Tclose(comp_objref_tid);
+ if (comp_objref_aid > 0)
+ H5Aclose(comp_objref_aid);
+ if (comp_objref_attr_sid > 0)
+ H5Sclose(comp_objref_attr_sid);
+ /* comp region ref */
+ if (comp_regref_tid > 0)
+ H5Tclose(comp_regref_tid);
+ if (comp_regref_aid > 0)
+ H5Aclose(comp_regref_aid);
+ if (comp_regref_attr_sid > 0)
+ H5Sclose(comp_regref_attr_sid);
+ /* vlen obj ref */
+ if (vlen_objref_attr_id > 0)
+ H5Aclose(vlen_objref_attr_id);
+ if (vlen_objref_attr_sid > 0)
+ H5Sclose(vlen_objref_attr_sid);
+ if (vlen_objref_attr_tid > 0)
+ H5Tclose(vlen_objref_attr_tid);
+ /* vlen region ref */
+ if (vlen_regref_attr_id > 0)
+ H5Aclose(vlen_regref_attr_id);
+ if (vlen_regref_attr_sid > 0)
+ H5Sclose(vlen_regref_attr_sid);
+ if (vlen_regref_attr_tid > 0)
+ H5Tclose(vlen_regref_attr_tid);
+
+ return ret;
+}
diff --git a/tools/test/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl b/tools/test/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl
new file mode 100644
index 0000000..fab9494
--- /dev/null
+++ b/tools/test/h5repack/testfiles/1_vds.h5-vds_dset_chunk20x10x5-v.ddl
@@ -0,0 +1,112 @@
+HDF5 "out-vds_dset_chunk20x10x5.1_vds.h5" {
+DATASET "vds_dset" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 5, 18, 8 ) / ( H5S_UNLIMITED, 18, 8 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 20, 10, 5 )
+ SIZE 16000
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE -9
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ DATA {
+ (0,0,0): 10, 10, 10, 10, 10, 10, 10, 10,
+ (0,1,0): 10, 10, 10, 10, 10, 10, 10, 10,
+ (0,2,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,3,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,4,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,5,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,6,0): 30, 30, 30, 30, 30, 30, 30, 30,
+ (0,7,0): 30, 30, 30, 30, 30, 30, 30, 30,
+ (0,8,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,9,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,10,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,11,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,12,0): 50, 50, 50, 50, 50, 50, 50, 50,
+ (0,13,0): 50, 50, 50, 50, 50, 50, 50, 50,
+ (0,14,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,15,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,16,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,17,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (1,0,0): 11, 11, 11, 11, 11, 11, 11, 11,
+ (1,1,0): 11, 11, 11, 11, 11, 11, 11, 11,
+ (1,2,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,3,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,4,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,5,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,6,0): 31, 31, 31, 31, 31, 31, 31, 31,
+ (1,7,0): 31, 31, 31, 31, 31, 31, 31, 31,
+ (1,8,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,9,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,10,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,11,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,12,0): 51, 51, 51, 51, 51, 51, 51, 51,
+ (1,13,0): 51, 51, 51, 51, 51, 51, 51, 51,
+ (1,14,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,15,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,16,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,17,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (2,0,0): 12, 12, 12, 12, 12, 12, 12, 12,
+ (2,1,0): 12, 12, 12, 12, 12, 12, 12, 12,
+ (2,2,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,3,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,4,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,5,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,6,0): 32, 32, 32, 32, 32, 32, 32, 32,
+ (2,7,0): 32, 32, 32, 32, 32, 32, 32, 32,
+ (2,8,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,9,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,10,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,11,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,12,0): 52, 52, 52, 52, 52, 52, 52, 52,
+ (2,13,0): 52, 52, 52, 52, 52, 52, 52, 52,
+ (2,14,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,15,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,16,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,17,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (3,0,0): 13, 13, 13, 13, 13, 13, 13, 13,
+ (3,1,0): 13, 13, 13, 13, 13, 13, 13, 13,
+ (3,2,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,3,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,4,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,5,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,6,0): 33, 33, 33, 33, 33, 33, 33, 33,
+ (3,7,0): 33, 33, 33, 33, 33, 33, 33, 33,
+ (3,8,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,9,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,10,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,11,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,12,0): 53, 53, 53, 53, 53, 53, 53, 53,
+ (3,13,0): 53, 53, 53, 53, 53, 53, 53, 53,
+ (3,14,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,15,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,16,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,17,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (4,0,0): 14, 14, 14, 14, 14, 14, 14, 14,
+ (4,1,0): 14, 14, 14, 14, 14, 14, 14, 14,
+ (4,2,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,3,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,4,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,5,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,6,0): 34, 34, 34, 34, 34, 34, 34, 34,
+ (4,7,0): 34, 34, 34, 34, 34, 34, 34, 34,
+ (4,8,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,9,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,10,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,11,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,12,0): 54, 54, 54, 54, 54, 54, 54, 54,
+ (4,13,0): 54, 54, 54, 54, 54, 54, 54, 54,
+ (4,14,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,15,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,16,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,17,0): 64, 64, 64, 64, 64, 64, 64, 64
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl b/tools/test/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl
new file mode 100644
index 0000000..51df9dd
--- /dev/null
+++ b/tools/test/h5repack/testfiles/2_vds.h5-vds_chunk3x6x9-v.ddl
@@ -0,0 +1,70 @@
+HDF5 "out-vds_chunk3x6x9.2_vds.h5" {
+DATASET "vds_dset" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 6, 8, 14 ) / ( H5S_UNLIMITED, 8, 14 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 3, 6, 9 )
+ SIZE 5184
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE -9
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ DATA {
+ (0,0,0): 10, 10, 10, 10, 10, 10, 10, 40, 40, 40, 40, 40, 40, 40,
+ (0,1,0): 10, 10, 10, 10, 10, 10, 10, 40, 40, 40, 40, 40, 40, 40,
+ (0,2,0): 20, 20, 20, 20, 20, 20, 20, 40, 40, 40, 40, 40, 40, 40,
+ (0,3,0): 20, 20, 20, 20, 20, 20, 20, 40, 40, 40, 40, 40, 40, 40,
+ (0,4,0): 20, 20, 20, 20, 20, 20, 20, 40, 40, 40, 40, 40, 40, 40,
+ (0,5,0): 20, 20, 20, 20, 20, 20, 20, 50, 50, 50, 50, 50, 50, 50,
+ (0,6,0): 30, 30, 30, 30, 30, 30, 30, 50, 50, 50, 50, 50, 50, 50,
+ (0,7,0): 30, 30, 30, 30, 30, 30, 30, 50, 50, 50, 50, 50, 50, 50,
+ (1,0,0): 11, 11, 11, 11, 11, 11, 11, 41, 41, 41, 41, 41, 41, 41,
+ (1,1,0): 11, 11, 11, 11, 11, 11, 11, 41, 41, 41, 41, 41, 41, 41,
+ (1,2,0): 21, 21, 21, 21, 21, 21, 21, 41, 41, 41, 41, 41, 41, 41,
+ (1,3,0): 21, 21, 21, 21, 21, 21, 21, 41, 41, 41, 41, 41, 41, 41,
+ (1,4,0): 21, 21, 21, 21, 21, 21, 21, 41, 41, 41, 41, 41, 41, 41,
+ (1,5,0): 21, 21, 21, 21, 21, 21, 21, 51, 51, 51, 51, 51, 51, 51,
+ (1,6,0): 31, 31, 31, 31, 31, 31, 31, 51, 51, 51, 51, 51, 51, 51,
+ (1,7,0): 31, 31, 31, 31, 31, 31, 31, 51, 51, 51, 51, 51, 51, 51,
+ (2,0,0): 12, 12, 12, 12, 12, 12, 12, 42, 42, 42, 42, 42, 42, 42,
+ (2,1,0): 12, 12, 12, 12, 12, 12, 12, 42, 42, 42, 42, 42, 42, 42,
+ (2,2,0): 22, 22, 22, 22, 22, 22, 22, 42, 42, 42, 42, 42, 42, 42,
+ (2,3,0): 22, 22, 22, 22, 22, 22, 22, 42, 42, 42, 42, 42, 42, 42,
+ (2,4,0): 22, 22, 22, 22, 22, 22, 22, 42, 42, 42, 42, 42, 42, 42,
+ (2,5,0): 22, 22, 22, 22, 22, 22, 22, 52, 52, 52, 52, 52, 52, 52,
+ (2,6,0): 32, 32, 32, 32, 32, 32, 32, 52, 52, 52, 52, 52, 52, 52,
+ (2,7,0): 32, 32, 32, 32, 32, 32, 32, 52, 52, 52, 52, 52, 52, 52,
+ (3,0,0): 13, 13, 13, 13, 13, 13, 13, 43, 43, 43, 43, 43, 43, 43,
+ (3,1,0): 13, 13, 13, 13, 13, 13, 13, 43, 43, 43, 43, 43, 43, 43,
+ (3,2,0): 23, 23, 23, 23, 23, 23, 23, 43, 43, 43, 43, 43, 43, 43,
+ (3,3,0): 23, 23, 23, 23, 23, 23, 23, 43, 43, 43, 43, 43, 43, 43,
+ (3,4,0): 23, 23, 23, 23, 23, 23, 23, 43, 43, 43, 43, 43, 43, 43,
+ (3,5,0): 23, 23, 23, 23, 23, 23, 23, 53, 53, 53, 53, 53, 53, 53,
+ (3,6,0): 33, 33, 33, 33, 33, 33, 33, 53, 53, 53, 53, 53, 53, 53,
+ (3,7,0): 33, 33, 33, 33, 33, 33, 33, 53, 53, 53, 53, 53, 53, 53,
+ (4,0,0): 14, 14, 14, 14, 14, 14, 14, 44, 44, 44, 44, 44, 44, 44,
+ (4,1,0): 14, 14, 14, 14, 14, 14, 14, 44, 44, 44, 44, 44, 44, 44,
+ (4,2,0): 24, 24, 24, 24, 24, 24, 24, 44, 44, 44, 44, 44, 44, 44,
+ (4,3,0): 24, 24, 24, 24, 24, 24, 24, 44, 44, 44, 44, 44, 44, 44,
+ (4,4,0): 24, 24, 24, 24, 24, 24, 24, 44, 44, 44, 44, 44, 44, 44,
+ (4,5,0): 24, 24, 24, 24, 24, 24, 24, 54, 54, 54, 54, 54, 54, 54,
+ (4,6,0): 34, 34, 34, 34, 34, 34, 34, 54, 54, 54, 54, 54, 54, 54,
+ (4,7,0): 34, 34, 34, 34, 34, 34, 34, 54, 54, 54, 54, 54, 54, 54,
+ (5,0,0): 15, 15, 15, 15, 15, 15, 15, 45, 45, 45, 45, 45, 45, 45,
+ (5,1,0): 15, 15, 15, 15, 15, 15, 15, 45, 45, 45, 45, 45, 45, 45,
+ (5,2,0): 25, 25, 25, 25, 25, 25, 25, 45, 45, 45, 45, 45, 45, 45,
+ (5,3,0): 25, 25, 25, 25, 25, 25, 25, 45, 45, 45, 45, 45, 45, 45,
+ (5,4,0): 25, 25, 25, 25, 25, 25, 25, 45, 45, 45, 45, 45, 45, 45,
+ (5,5,0): 25, 25, 25, 25, 25, 25, 25, 55, 55, 55, 55, 55, 55, 55,
+ (5,6,0): 35, 35, 35, 35, 35, 35, 35, 55, 55, 55, 55, 55, 55, 55,
+ (5,7,0): 35, 35, 35, 35, 35, 35, 35, 55, 55, 55, 55, 55, 55, 55
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl b/tools/test/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl
new file mode 100644
index 0000000..dcd172c
--- /dev/null
+++ b/tools/test/h5repack/testfiles/3_1_vds.h5-vds_chunk2x5x8-v.ddl
@@ -0,0 +1,147 @@
+HDF5 "out-vds_chunk2x5x8.3_1_vds.h5" {
+DATASET "vds_dset" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 5, 25, 8 ) / ( H5S_UNLIMITED, 25, 8 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 2, 5, 8 )
+ SIZE 4800
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE -9
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ DATA {
+ (0,0,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,1,0): 10, 10, 10, 10, 10, 10, 10, 10,
+ (0,2,0): 10, 10, 10, 10, 10, 10, 10, 10,
+ (0,3,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,4,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,5,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,6,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,7,0): 20, 20, 20, 20, 20, 20, 20, 20,
+ (0,8,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,9,0): 30, 30, 30, 30, 30, 30, 30, 30,
+ (0,10,0): 30, 30, 30, 30, 30, 30, 30, 30,
+ (0,11,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,12,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,13,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,14,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,15,0): 40, 40, 40, 40, 40, 40, 40, 40,
+ (0,16,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,17,0): 50, 50, 50, 50, 50, 50, 50, 50,
+ (0,18,0): 50, 50, 50, 50, 50, 50, 50, 50,
+ (0,19,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (0,20,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,21,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,22,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,23,0): 60, 60, 60, 60, 60, 60, 60, 60,
+ (0,24,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,0,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,1,0): 11, 11, 11, 11, 11, 11, 11, 11,
+ (1,2,0): 11, 11, 11, 11, 11, 11, 11, 11,
+ (1,3,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,4,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,5,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,6,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,7,0): 21, 21, 21, 21, 21, 21, 21, 21,
+ (1,8,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,9,0): 31, 31, 31, 31, 31, 31, 31, 31,
+ (1,10,0): 31, 31, 31, 31, 31, 31, 31, 31,
+ (1,11,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,12,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,13,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,14,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,15,0): 41, 41, 41, 41, 41, 41, 41, 41,
+ (1,16,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,17,0): 51, 51, 51, 51, 51, 51, 51, 51,
+ (1,18,0): 51, 51, 51, 51, 51, 51, 51, 51,
+ (1,19,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (1,20,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,21,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,22,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,23,0): 61, 61, 61, 61, 61, 61, 61, 61,
+ (1,24,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,0,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,1,0): 12, 12, 12, 12, 12, 12, 12, 12,
+ (2,2,0): 12, 12, 12, 12, 12, 12, 12, 12,
+ (2,3,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,4,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,5,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,6,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,7,0): 22, 22, 22, 22, 22, 22, 22, 22,
+ (2,8,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,9,0): 32, 32, 32, 32, 32, 32, 32, 32,
+ (2,10,0): 32, 32, 32, 32, 32, 32, 32, 32,
+ (2,11,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,12,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,13,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,14,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,15,0): 42, 42, 42, 42, 42, 42, 42, 42,
+ (2,16,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,17,0): 52, 52, 52, 52, 52, 52, 52, 52,
+ (2,18,0): 52, 52, 52, 52, 52, 52, 52, 52,
+ (2,19,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (2,20,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,21,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,22,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,23,0): 62, 62, 62, 62, 62, 62, 62, 62,
+ (2,24,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,0,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,1,0): 13, 13, 13, 13, 13, 13, 13, 13,
+ (3,2,0): 13, 13, 13, 13, 13, 13, 13, 13,
+ (3,3,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,4,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,5,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,6,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,7,0): 23, 23, 23, 23, 23, 23, 23, 23,
+ (3,8,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,9,0): 33, 33, 33, 33, 33, 33, 33, 33,
+ (3,10,0): 33, 33, 33, 33, 33, 33, 33, 33,
+ (3,11,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,12,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,13,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,14,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,15,0): 43, 43, 43, 43, 43, 43, 43, 43,
+ (3,16,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,17,0): 53, 53, 53, 53, 53, 53, 53, 53,
+ (3,18,0): 53, 53, 53, 53, 53, 53, 53, 53,
+ (3,19,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (3,20,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,21,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,22,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,23,0): 63, 63, 63, 63, 63, 63, 63, 63,
+ (3,24,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,0,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,1,0): 14, 14, 14, 14, 14, 14, 14, 14,
+ (4,2,0): 14, 14, 14, 14, 14, 14, 14, 14,
+ (4,3,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,4,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,5,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,6,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,7,0): 24, 24, 24, 24, 24, 24, 24, 24,
+ (4,8,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,9,0): 34, 34, 34, 34, 34, 34, 34, 34,
+ (4,10,0): 34, 34, 34, 34, 34, 34, 34, 34,
+ (4,11,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,12,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,13,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,14,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,15,0): 44, 44, 44, 44, 44, 44, 44, 44,
+ (4,16,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,17,0): 54, 54, 54, 54, 54, 54, 54, 54,
+ (4,18,0): 54, 54, 54, 54, 54, 54, 54, 54,
+ (4,19,0): -9, -9, -9, -9, -9, -9, -9, -9,
+ (4,20,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,21,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,22,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,23,0): 64, 64, 64, 64, 64, 64, 64, 64,
+ (4,24,0): -9, -9, -9, -9, -9, -9, -9, -9
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl b/tools/test/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl
new file mode 100644
index 0000000..1e8927c
--- /dev/null
+++ b/tools/test/h5repack/testfiles/4_vds.h5-vds_compa-v.ddl
@@ -0,0 +1,58 @@
+HDF5 "out-vds_compa.4_vds.h5" {
+DATASET "vds_dset" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 9, 4, 4 ) / ( 9, 4, 4 ) }
+ STORAGE_LAYOUT {
+ COMPACT
+ SIZE 576
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE -9
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_EARLY
+ }
+ DATA {
+ (0,0,0): 10, 10, 10, 10,
+ (0,1,0): 10, 10, 10, 10,
+ (0,2,0): 10, 10, 10, 10,
+ (0,3,0): 10, 10, 10, 10,
+ (1,0,0): 11, 11, 11, 11,
+ (1,1,0): 11, 11, 11, 11,
+ (1,2,0): 11, 11, 11, 11,
+ (1,3,0): 11, 11, 11, 11,
+ (2,0,0): 12, 12, 12, 12,
+ (2,1,0): 12, 12, 12, 12,
+ (2,2,0): 12, 12, 12, 12,
+ (2,3,0): 12, 12, 12, 12,
+ (3,0,0): 20, 20, 20, 20,
+ (3,1,0): 20, 20, 20, 20,
+ (3,2,0): 20, 20, 20, 20,
+ (3,3,0): 20, 20, 20, 20,
+ (4,0,0): 21, 21, 21, 21,
+ (4,1,0): 21, 21, 21, 21,
+ (4,2,0): 21, 21, 21, 21,
+ (4,3,0): 21, 21, 21, 21,
+ (5,0,0): 22, 22, 22, 22,
+ (5,1,0): 22, 22, 22, 22,
+ (5,2,0): 22, 22, 22, 22,
+ (5,3,0): 22, 22, 22, 22,
+ (6,0,0): 30, 30, 30, 30,
+ (6,1,0): 30, 30, 30, 30,
+ (6,2,0): 30, 30, 30, 30,
+ (6,3,0): 30, 30, 30, 30,
+ (7,0,0): 31, 31, 31, 31,
+ (7,1,0): 31, 31, 31, 31,
+ (7,2,0): 31, 31, 31, 31,
+ (7,3,0): 31, 31, 31, 31,
+ (8,0,0): 32, 32, 32, 32,
+ (8,1,0): 32, 32, 32, 32,
+ (8,2,0): 32, 32, 32, 32,
+ (8,3,0): 32, 32, 32, 32
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl b/tools/test/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl
new file mode 100644
index 0000000..c499b35
--- /dev/null
+++ b/tools/test/h5repack/testfiles/4_vds.h5-vds_conti-v.ddl
@@ -0,0 +1,59 @@
+HDF5 "out-vds_conti.4_vds.h5" {
+DATASET "vds_dset" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 9, 4, 4 ) / ( 9, 4, 4 ) }
+ STORAGE_LAYOUT {
+ CONTIGUOUS
+ SIZE 576
+ OFFSET 2144
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE -9
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_LATE
+ }
+ DATA {
+ (0,0,0): 10, 10, 10, 10,
+ (0,1,0): 10, 10, 10, 10,
+ (0,2,0): 10, 10, 10, 10,
+ (0,3,0): 10, 10, 10, 10,
+ (1,0,0): 11, 11, 11, 11,
+ (1,1,0): 11, 11, 11, 11,
+ (1,2,0): 11, 11, 11, 11,
+ (1,3,0): 11, 11, 11, 11,
+ (2,0,0): 12, 12, 12, 12,
+ (2,1,0): 12, 12, 12, 12,
+ (2,2,0): 12, 12, 12, 12,
+ (2,3,0): 12, 12, 12, 12,
+ (3,0,0): 20, 20, 20, 20,
+ (3,1,0): 20, 20, 20, 20,
+ (3,2,0): 20, 20, 20, 20,
+ (3,3,0): 20, 20, 20, 20,
+ (4,0,0): 21, 21, 21, 21,
+ (4,1,0): 21, 21, 21, 21,
+ (4,2,0): 21, 21, 21, 21,
+ (4,3,0): 21, 21, 21, 21,
+ (5,0,0): 22, 22, 22, 22,
+ (5,1,0): 22, 22, 22, 22,
+ (5,2,0): 22, 22, 22, 22,
+ (5,3,0): 22, 22, 22, 22,
+ (6,0,0): 30, 30, 30, 30,
+ (6,1,0): 30, 30, 30, 30,
+ (6,2,0): 30, 30, 30, 30,
+ (6,3,0): 30, 30, 30, 30,
+ (7,0,0): 31, 31, 31, 31,
+ (7,1,0): 31, 31, 31, 31,
+ (7,2,0): 31, 31, 31, 31,
+ (7,3,0): 31, 31, 31, 31,
+ (8,0,0): 32, 32, 32, 32,
+ (8,1,0): 32, 32, 32, 32,
+ (8,2,0): 32, 32, 32, 32,
+ (8,3,0): 32, 32, 32, 32
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/README b/tools/test/h5repack/testfiles/README
new file mode 100644
index 0000000..4096dee
--- /dev/null
+++ b/tools/test/h5repack/testfiles/README
@@ -0,0 +1,5 @@
+h5repack_nested_8bit_enum_deflated.h5:
+h5repack_nested_8bit_enum.h5:
+ enuberated 8bit type nested in compount type. Original file provided
+ by a user (HDFFV-8667) as a test file. Used h5copy to extract only the
+ Compound type dataset. The non-deflated version is produced by h5repack.
diff --git a/tools/test/h5repack/testfiles/deflate_limit.h5repack_layout.h5.ddl b/tools/test/h5repack/testfiles/deflate_limit.h5repack_layout.h5.ddl
new file mode 100644
index 0000000..75f54fa
--- /dev/null
+++ b/tools/test/h5repack/testfiles/deflate_limit.h5repack_layout.h5.ddl
@@ -0,0 +1,130 @@
+HDF5 "out-deflate_limit.h5repack_layout.h5" {
+GROUP "/" {
+ DATASET "dset1" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset2" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset3" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset4" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_chunk" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 20, 10 )
+ SIZE 1283 (2.494:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_compact" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_contiguous" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 1150 (2.783:1 COMPRESSION)
+ }
+ FILTERS {
+ COMPRESSION DEFLATE { LEVEL 1 }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/h5repack-help.txt b/tools/test/h5repack/testfiles/h5repack-help.txt
new file mode 100644
index 0000000..049e27d
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack-help.txt
@@ -0,0 +1,125 @@
+usage: h5repack [OPTIONS] file1 file2
+ file1 Input HDF5 File
+ file2 Output HDF5 File
+ OPTIONS
+ -h, --help Print a usage message and exit
+ -v, --verbose Verbose mode, print object information
+ -V, --version Print version number and exit
+ -n, --native Use a native HDF5 type when repacking
+ -L, --latest Use latest version of file format
+ -c L1, --compact=L1 Maximum number of links in header messages
+ -d L2, --indexed=L2 Minimum number of links in the indexed format
+ -s S[:F], --ssize=S[:F] Shared object header message minimum size
+ -m M, --minimum=M Do not apply the filter to datasets smaller than M
+ -e E, --file=E Name of file E with the -f and -l options
+ -u U, --ublock=U Name of file U with user block data to be added
+ -b B, --block=B Size of user block to be added
+ -M A, --metadata_block_size=A Metadata block size for H5Pset_meta_block_size
+ -t T, --threshold=T Threshold value for H5Pset_alignment
+ -a A, --alignment=A Alignment value for H5Pset_alignment
+ -f FILT, --filter=FILT Filter type
+ -l LAYT, --layout=LAYT Layout type
+ -S FS_STRGY, --fs_strategy=FS_STRGY File space management strategy
+ -T FS_THRD, --fs_threshold=FS_THRD Free-space section threshold
+
+ M - is an integer greater than 1, size of dataset in bytes (default is 0)
+ E - is a filename.
+ S - is an integer
+ U - is a filename.
+ T - is an integer
+ A - is an integer greater than zero
+ B - is the user block size, any value that is 512 or greater and is
+ a power of 2 (1024 default)
+ F - is the shared object header message type, any of <dspace|dtype|fill|
+ pline|attr>. If F is not specified, S applies to all messages
+
+ --enable-error-stack Prints messages from the HDF5 error stack as they
+ occur.
+
+ FS_STRGY is the file space management strategy to use for the output file.
+ It is a string as listed below:
+ ALL_PERSIST - Use persistent free-space managers, aggregators and virtual file driver
+ for file space allocation
+ ALL - Use non-persistent free-space managers, aggregators and virtual file driver
+ for file space allocation
+ AGGR_VFD - Use aggregators and virtual file driver for file space allocation
+ VFD - Use virtual file driver for file space allocation
+
+ FS_THRD is the free-space section threshold to use for the output file.
+ It is the minimum size (in bytes) of free-space sections to be tracked
+ by the the library's free-space managers.
+
+ FILT - is a string with the format:
+
+ <list of objects>:<name of filter>=<filter parameters>
+
+ <list of objects> is a comma separated list of object names, meaning apply
+ compression only to those objects. If no names are specified, the filter
+ is applied to all objects
+ <name of filter> can be:
+ GZIP, to apply the HDF5 GZIP filter (GZIP compression)
+ SZIP, to apply the HDF5 SZIP filter (SZIP compression)
+ SHUF, to apply the HDF5 shuffle filter
+ FLET, to apply the HDF5 checksum filter
+ NBIT, to apply the HDF5 NBIT filter (NBIT compression)
+ SOFF, to apply the HDF5 Scale/Offset filter
+ UD, to apply a user defined filter
+ NONE, to remove all filters
+ <filter parameters> is optional filter parameter information
+ GZIP=<deflation level> from 1-9
+ SZIP=<pixels per block,coding> pixels per block is a even number in
+ 2-32 and coding method is either EC or NN
+ SHUF (no parameter)
+ FLET (no parameter)
+ NBIT (no parameter)
+ SOFF=<scale_factor,scale_type> scale_factor is an integer and scale_type
+ is either IN or DS
+ UD=<filter_number,cd_value_count,value_1[,value_2,...,value_N]>
+ required values for filter_number,cd_value_count,value_1
+ optional values for value_2 to value_N
+ NONE (no parameter)
+
+ LAYT - is a string with the format:
+
+ <list of objects>:<layout type>=<layout parameters>
+
+ <list of objects> is a comma separated list of object names, meaning that
+ layout information is supplied for those objects. If no names are
+ specified, the layout type is applied to all objects
+ <layout type> can be:
+ CHUNK, to apply chunking layout
+ COMPA, to apply compact layout
+ CONTI, to apply contiguous layout
+ <layout parameters> is optional layout information
+ CHUNK=DIM[xDIM...xDIM], the chunk size of each dimension
+ COMPA (no parameter)
+ CONTI (no parameter)
+
+Examples of use:
+
+1) h5repack -v -f GZIP=1 file1 file2
+
+ GZIP compression with level 1 to all objects
+
+2) h5repack -v -f dset1:SZIP=8,NN file1 file2
+
+ SZIP compression with 8 pixels per block and NN coding method to object dset1
+
+3) h5repack -v -l dset1,dset2:CHUNK=20x10 -f dset3,dset4,dset5:NONE file1 file2
+
+ Chunked layout, with a layout size of 20x10, to objects dset1 and dset2
+ and remove filters to objects dset3, dset4, dset5
+
+4) h5repack -L -c 10 -s 20:dtype file1 file2
+
+ Using latest file format with maximum compact group size of 10 and
+ and minimum shared datatype size of 20
+
+5) h5repack -f SHUF -f GZIP=1 file1 file2
+
+ Add both filters SHUF and GZIP in this order to all datasets
+
+6) h5repack -f UD=307,1,9 file1 file2
+
+ Add bzip2 filter to all datasets
+
diff --git a/tools/test/h5repack/testfiles/h5repack.info b/tools/test/h5repack/testfiles/h5repack.info
new file mode 100644
index 0000000..216948d
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack.info
@@ -0,0 +1 @@
+-l dset1:CHUNK=20x20 -f dset1,dset2:GZIP=1
diff --git a/tools/test/h5repack/testfiles/h5repack_attr.h5 b/tools/test/h5repack/testfiles/h5repack_attr.h5
new file mode 100644
index 0000000..80df0be
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_attr.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_attr_refs.h5 b/tools/test/h5repack/testfiles/h5repack_attr_refs.h5
new file mode 100644
index 0000000..1b0ca34
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_attr_refs.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_deflate.h5 b/tools/test/h5repack/testfiles/h5repack_deflate.h5
new file mode 100644
index 0000000..4988491
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_deflate.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_early.h5 b/tools/test/h5repack/testfiles/h5repack_early.h5
new file mode 100644
index 0000000..d9a7ece
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_early.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_ext.bin b/tools/test/h5repack/testfiles/h5repack_ext.bin
new file mode 100644
index 0000000..f858094
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_ext.bin
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_ext.h5 b/tools/test/h5repack/testfiles/h5repack_ext.h5
new file mode 100644
index 0000000..8518b5b
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_ext.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_fill.h5 b/tools/test/h5repack/testfiles/h5repack_fill.h5
new file mode 100644
index 0000000..ac40089
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_fill.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_filters.h5 b/tools/test/h5repack/testfiles/h5repack_filters.h5
new file mode 100644
index 0000000..eabade8
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_filters.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst b/tools/test/h5repack/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst
new file mode 100644
index 0000000..36e65b9
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_filters.h5-gzip_verbose_filters.tst
@@ -0,0 +1,13 @@
+Objects to modify layout are...
+Objects to apply filter are...
+ </dset_deflate> with GZIP filter
+ </dset_deflate>...Found
+-----------------------------------------
+ Type Filter (Compression) Name
+-----------------------------------------
+ group /
+ dset /dset_all
+ dset GZIP (0.995:1) /dset_deflate
+ dset /dset_fletcher32
+ dset /dset_nbit
+ dset /dset_shuffle
diff --git a/tools/test/h5repack/testfiles/h5repack_fletcher.h5 b/tools/test/h5repack/testfiles/h5repack_fletcher.h5
new file mode 100644
index 0000000..16ca4ef
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_fletcher.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_hlink.h5 b/tools/test/h5repack/testfiles/h5repack_hlink.h5
new file mode 100644
index 0000000..80c0fcc
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_hlink.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.UD.h5 b/tools/test/h5repack/testfiles/h5repack_layout.UD.h5
new file mode 100644
index 0000000..caf2024
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.UD.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.UD.h5-plugin_none.ddl b/tools/test/h5repack/testfiles/h5repack_layout.UD.h5-plugin_none.ddl
new file mode 100644
index 0000000..66c4c69
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.UD.h5-plugin_none.ddl
@@ -0,0 +1,130 @@
+HDF5 "out-plugin_none.h5repack_layout.UD.h5" {
+GROUP "/" {
+ DATASET "dset1" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset2" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset3" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset4" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_chunk" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, H5S_UNLIMITED ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 20, 10 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_compact" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_contiguous" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200
+ }
+ FILTERS {
+ NONE
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5 b/tools/test/h5repack/testfiles/h5repack_layout.h5
new file mode 100644
index 0000000..4e53766
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst b/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst
new file mode 100644
index 0000000..95cc4c6
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-dset2_chunk_20x10-errstk.tst
@@ -0,0 +1,38 @@
+HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs):
+ #000: (file name) line (number) in H5Dcreate2(): unable to create dataset
+ major: Dataset
+ minor: Unable to initialize object
+ #001: (file name) line (number) in H5D__create_named(): unable to create and link to dataset
+ major: Dataset
+ minor: Unable to initialize object
+ #002: (file name) line (number) in H5L_link_object(): unable to create new link to object
+ major: Links
+ minor: Unable to initialize object
+ #003: (file name) line (number) in H5L_create_real(): can't insert link
+ major: Symbol table
+ minor: Unable to insert object
+ #004: (file name) line (number) in H5G_traverse(): internal path traversal failed
+ major: Symbol table
+ minor: Object not found
+ #005: (file name) line (number) in H5G_traverse_real(): traversal operator failed
+ major: Symbol table
+ minor: Callback failed
+ #006: (file name) line (number) in H5L_link_cb(): unable to create object
+ major: Object header
+ minor: Unable to initialize object
+ #007: (file name) line (number) in H5O_obj_create(): unable to open object
+ major: Object header
+ minor: Can't open object
+ #008: (file name) line (number) in H5O__dset_create(): unable to create dataset
+ major: Dataset
+ minor: Unable to initialize object
+ #009: (file name) line (number) in H5D__create(): unable to construct layout information
+ major: Dataset
+ minor: Unable to initialize object
+ #010: (file name) line (number) in H5D__chunk_construct(): dimensionality of chunks doesn't match the dataspace
+ major: Dataset
+ minor: Bad value
+H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs):
+ #000: (file name) line (number) in do_copy_objects(): H5Dcreate2 failed
+ major: Failure in tools library
+ minor: error in function
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_test.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_test.ddl
new file mode 100644
index 0000000..a8b4562
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_test.ddl
@@ -0,0 +1,158 @@
+HDF5 "out-plugin_test.h5repack_layout.h5" {
+GROUP "/" {
+ DATASET "dset1" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset2" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset3" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset4" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_chunk" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 20, 10 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_compact" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_contiguous" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 257
+ COMMENT dynlib1
+ PARAMS { 9 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl
new file mode 100644
index 0000000..3d09e14
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl
@@ -0,0 +1,158 @@
+HDF5 "out-plugin_version_test.h5repack_layout.h5" {
+GROUP "/" {
+ DATASET "dset1" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset2" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset3" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset4" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_chunk" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 20, 10 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_compact" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+ DATASET "dset_contiguous" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ STORAGE_LAYOUT {
+ CHUNKED ( 40, 20 )
+ SIZE 3200 (1.000:1 COMPRESSION)
+ }
+ FILTERS {
+ USER_DEFINED_FILTER {
+ FILTER_ID 260
+ COMMENT dynlib4
+ PARAMS { 9 1 9 235 }
+ }
+ }
+ FILLVALUE {
+ FILL_TIME H5D_FILL_TIME_IFSET
+ VALUE H5D_FILL_VALUE_DEFAULT
+ }
+ ALLOCATION_TIME {
+ H5D_ALLOC_TIME_INCR
+ }
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_zero.tst b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_zero.tst
new file mode 100644
index 0000000..0993d5b
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_zero.tst
@@ -0,0 +1,9 @@
+Objects to modify layout are...
+Objects to apply filter are...
+ User Defined 250
+Making file <out-plugin_zero.h5repack_layout.h5>...
+-----------------------------------------
+ Type Filter (Compression) Name
+-----------------------------------------
+ group /
+h5repack error: <h5repack_layout.h5>: Could not copy data to: out-plugin_zero.h5repack_layout.h5
diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5.ddl
new file mode 100644
index 0000000..00c74f4
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout.h5.ddl
@@ -0,0 +1,606 @@
+HDF5 "h5repack_layout.h5" {
+GROUP "/" {
+ DATASET "dset1" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset2" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset3" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset4" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset_chunk" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, H5S_UNLIMITED ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset_compact" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+ DATASET "dset_contiguous" {
+ DATATYPE H5T_STD_I32LE
+ DATASPACE SIMPLE { ( 40, 20 ) / ( 40, 20 ) }
+ DATA {
+ (0,0): 0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11, 12, 13, 14, 15, 16, 17,
+ (0,18): 18, 19,
+ (1,0): 20, 21, 22, 23, 24, 25, 26, 27, 28, 29, 30, 31, 32, 33, 34, 35,
+ (1,16): 36, 37, 38, 39,
+ (2,0): 40, 41, 42, 43, 44, 45, 46, 47, 48, 49, 50, 51, 52, 53, 54, 55,
+ (2,16): 56, 57, 58, 59,
+ (3,0): 60, 61, 62, 63, 64, 65, 66, 67, 68, 69, 70, 71, 72, 73, 74, 75,
+ (3,16): 76, 77, 78, 79,
+ (4,0): 80, 81, 82, 83, 84, 85, 86, 87, 88, 89, 90, 91, 92, 93, 94, 95,
+ (4,16): 96, 97, 98, 99,
+ (5,0): 100, 101, 102, 103, 104, 105, 106, 107, 108, 109, 110, 111, 112,
+ (5,13): 113, 114, 115, 116, 117, 118, 119,
+ (6,0): 120, 121, 122, 123, 124, 125, 126, 127, 128, 129, 130, 131, 132,
+ (6,13): 133, 134, 135, 136, 137, 138, 139,
+ (7,0): 140, 141, 142, 143, 144, 145, 146, 147, 148, 149, 150, 151, 152,
+ (7,13): 153, 154, 155, 156, 157, 158, 159,
+ (8,0): 160, 161, 162, 163, 164, 165, 166, 167, 168, 169, 170, 171, 172,
+ (8,13): 173, 174, 175, 176, 177, 178, 179,
+ (9,0): 180, 181, 182, 183, 184, 185, 186, 187, 188, 189, 190, 191, 192,
+ (9,13): 193, 194, 195, 196, 197, 198, 199,
+ (10,0): 200, 201, 202, 203, 204, 205, 206, 207, 208, 209, 210, 211,
+ (10,12): 212, 213, 214, 215, 216, 217, 218, 219,
+ (11,0): 220, 221, 222, 223, 224, 225, 226, 227, 228, 229, 230, 231,
+ (11,12): 232, 233, 234, 235, 236, 237, 238, 239,
+ (12,0): 240, 241, 242, 243, 244, 245, 246, 247, 248, 249, 250, 251,
+ (12,12): 252, 253, 254, 255, 256, 257, 258, 259,
+ (13,0): 260, 261, 262, 263, 264, 265, 266, 267, 268, 269, 270, 271,
+ (13,12): 272, 273, 274, 275, 276, 277, 278, 279,
+ (14,0): 280, 281, 282, 283, 284, 285, 286, 287, 288, 289, 290, 291,
+ (14,12): 292, 293, 294, 295, 296, 297, 298, 299,
+ (15,0): 300, 301, 302, 303, 304, 305, 306, 307, 308, 309, 310, 311,
+ (15,12): 312, 313, 314, 315, 316, 317, 318, 319,
+ (16,0): 320, 321, 322, 323, 324, 325, 326, 327, 328, 329, 330, 331,
+ (16,12): 332, 333, 334, 335, 336, 337, 338, 339,
+ (17,0): 340, 341, 342, 343, 344, 345, 346, 347, 348, 349, 350, 351,
+ (17,12): 352, 353, 354, 355, 356, 357, 358, 359,
+ (18,0): 360, 361, 362, 363, 364, 365, 366, 367, 368, 369, 370, 371,
+ (18,12): 372, 373, 374, 375, 376, 377, 378, 379,
+ (19,0): 380, 381, 382, 383, 384, 385, 386, 387, 388, 389, 390, 391,
+ (19,12): 392, 393, 394, 395, 396, 397, 398, 399,
+ (20,0): 400, 401, 402, 403, 404, 405, 406, 407, 408, 409, 410, 411,
+ (20,12): 412, 413, 414, 415, 416, 417, 418, 419,
+ (21,0): 420, 421, 422, 423, 424, 425, 426, 427, 428, 429, 430, 431,
+ (21,12): 432, 433, 434, 435, 436, 437, 438, 439,
+ (22,0): 440, 441, 442, 443, 444, 445, 446, 447, 448, 449, 450, 451,
+ (22,12): 452, 453, 454, 455, 456, 457, 458, 459,
+ (23,0): 460, 461, 462, 463, 464, 465, 466, 467, 468, 469, 470, 471,
+ (23,12): 472, 473, 474, 475, 476, 477, 478, 479,
+ (24,0): 480, 481, 482, 483, 484, 485, 486, 487, 488, 489, 490, 491,
+ (24,12): 492, 493, 494, 495, 496, 497, 498, 499,
+ (25,0): 500, 501, 502, 503, 504, 505, 506, 507, 508, 509, 510, 511,
+ (25,12): 512, 513, 514, 515, 516, 517, 518, 519,
+ (26,0): 520, 521, 522, 523, 524, 525, 526, 527, 528, 529, 530, 531,
+ (26,12): 532, 533, 534, 535, 536, 537, 538, 539,
+ (27,0): 540, 541, 542, 543, 544, 545, 546, 547, 548, 549, 550, 551,
+ (27,12): 552, 553, 554, 555, 556, 557, 558, 559,
+ (28,0): 560, 561, 562, 563, 564, 565, 566, 567, 568, 569, 570, 571,
+ (28,12): 572, 573, 574, 575, 576, 577, 578, 579,
+ (29,0): 580, 581, 582, 583, 584, 585, 586, 587, 588, 589, 590, 591,
+ (29,12): 592, 593, 594, 595, 596, 597, 598, 599,
+ (30,0): 600, 601, 602, 603, 604, 605, 606, 607, 608, 609, 610, 611,
+ (30,12): 612, 613, 614, 615, 616, 617, 618, 619,
+ (31,0): 620, 621, 622, 623, 624, 625, 626, 627, 628, 629, 630, 631,
+ (31,12): 632, 633, 634, 635, 636, 637, 638, 639,
+ (32,0): 640, 641, 642, 643, 644, 645, 646, 647, 648, 649, 650, 651,
+ (32,12): 652, 653, 654, 655, 656, 657, 658, 659,
+ (33,0): 660, 661, 662, 663, 664, 665, 666, 667, 668, 669, 670, 671,
+ (33,12): 672, 673, 674, 675, 676, 677, 678, 679,
+ (34,0): 680, 681, 682, 683, 684, 685, 686, 687, 688, 689, 690, 691,
+ (34,12): 692, 693, 694, 695, 696, 697, 698, 699,
+ (35,0): 700, 701, 702, 703, 704, 705, 706, 707, 708, 709, 710, 711,
+ (35,12): 712, 713, 714, 715, 716, 717, 718, 719,
+ (36,0): 720, 721, 722, 723, 724, 725, 726, 727, 728, 729, 730, 731,
+ (36,12): 732, 733, 734, 735, 736, 737, 738, 739,
+ (37,0): 740, 741, 742, 743, 744, 745, 746, 747, 748, 749, 750, 751,
+ (37,12): 752, 753, 754, 755, 756, 757, 758, 759,
+ (38,0): 760, 761, 762, 763, 764, 765, 766, 767, 768, 769, 770, 771,
+ (38,12): 772, 773, 774, 775, 776, 777, 778, 779,
+ (39,0): 780, 781, 782, 783, 784, 785, 786, 787, 788, 789, 790, 791,
+ (39,12): 792, 793, 794, 795, 796, 797, 798, 799
+ }
+ }
+}
+}
diff --git a/tools/test/h5repack/testfiles/h5repack_layout2.h5 b/tools/test/h5repack/testfiles/h5repack_layout2.h5
new file mode 100644
index 0000000..f6821e5
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout2.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_layout3.h5 b/tools/test/h5repack/testfiles/h5repack_layout3.h5
new file mode 100644
index 0000000..6d2de41
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layout3.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_layouto.h5 b/tools/test/h5repack/testfiles/h5repack_layouto.h5
new file mode 100644
index 0000000..a038e68
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_layouto.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_named_dtypes.h5 b/tools/test/h5repack/testfiles/h5repack_named_dtypes.h5
new file mode 100644
index 0000000..85c1352
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_named_dtypes.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_nbit.h5 b/tools/test/h5repack/testfiles/h5repack_nbit.h5
new file mode 100644
index 0000000..ac71bee
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_nbit.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum.h5 b/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum.h5
new file mode 100644
index 0000000..f1bd8e9
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5 b/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5
new file mode 100644
index 0000000..2e66da2
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_nested_8bit_enum_deflated.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_objs.h5 b/tools/test/h5repack/testfiles/h5repack_objs.h5
new file mode 100644
index 0000000..284b0ac
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_objs.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_refs.h5 b/tools/test/h5repack/testfiles/h5repack_refs.h5
new file mode 100644
index 0000000..2a1ec9b
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_refs.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_shuffle.h5 b/tools/test/h5repack/testfiles/h5repack_shuffle.h5
new file mode 100644
index 0000000..c14e2cb
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_shuffle.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_soffset.h5 b/tools/test/h5repack/testfiles/h5repack_soffset.h5
new file mode 100644
index 0000000..2acd867
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_soffset.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/h5repack_szip.h5 b/tools/test/h5repack/testfiles/h5repack_szip.h5
new file mode 100644
index 0000000..b16d169
--- /dev/null
+++ b/tools/test/h5repack/testfiles/h5repack_szip.h5
Binary files differ
diff --git a/tools/test/h5repack/testfiles/plugin_none.h5repack_layout.UD.h5.tst b/tools/test/h5repack/testfiles/plugin_none.h5repack_layout.UD.h5.tst
new file mode 100644
index 0000000..4fb6906
--- /dev/null
+++ b/tools/test/h5repack/testfiles/plugin_none.h5repack_layout.UD.h5.tst
@@ -0,0 +1,14 @@
+Objects to modify layout are...
+Objects to apply filter are...
+ Uncompress all
+-----------------------------------------
+ Type Filter (Compression) Name
+-----------------------------------------
+ group /
+ dset (1.000:1) /dset1
+ dset (1.000:1) /dset2
+ dset (1.000:1) /dset3
+ dset (1.000:1) /dset4
+ dset (1.000:1) /dset_chunk
+ dset (1.000:1) /dset_compact
+ dset (1.000:1) /dset_contiguous
diff --git a/tools/test/h5repack/testfiles/plugin_test.h5repack_layout.h5.tst b/tools/test/h5repack/testfiles/plugin_test.h5repack_layout.h5.tst
new file mode 100644
index 0000000..7f9bd6e
--- /dev/null
+++ b/tools/test/h5repack/testfiles/plugin_test.h5repack_layout.h5.tst
@@ -0,0 +1,14 @@
+Objects to modify layout are...
+Objects to apply filter are...
+ User Defined 257
+-----------------------------------------
+ Type Filter (Compression) Name
+-----------------------------------------
+ group /
+ dset UD (1.000:1) /dset1
+ dset UD (1.000:1) /dset2
+ dset UD (1.000:1) /dset3
+ dset UD (1.000:1) /dset4
+ dset UD (1.000:1) /dset_chunk
+ dset UD (1.000:1) /dset_compact
+ dset UD (1.000:1) /dset_contiguous
diff --git a/tools/test/h5repack/testfiles/plugin_version_test.h5repack_layout.h5.tst b/tools/test/h5repack/testfiles/plugin_version_test.h5repack_layout.h5.tst
new file mode 100644
index 0000000..1a496c6
--- /dev/null
+++ b/tools/test/h5repack/testfiles/plugin_version_test.h5repack_layout.h5.tst
@@ -0,0 +1,14 @@
+Objects to modify layout are...
+Objects to apply filter are...
+ User Defined 260
+-----------------------------------------
+ Type Filter (Compression) Name
+-----------------------------------------
+ group /
+ dset UD (1.000:1) /dset1
+ dset UD (1.000:1) /dset2
+ dset UD (1.000:1) /dset3
+ dset UD (1.000:1) /dset4
+ dset UD (1.000:1) /dset_chunk
+ dset UD (1.000:1) /dset_compact
+ dset UD (1.000:1) /dset_contiguous
diff --git a/tools/test/h5repack/testfiles/ublock.bin b/tools/test/h5repack/testfiles/ublock.bin
new file mode 100644
index 0000000..b2d03f3
--- /dev/null
+++ b/tools/test/h5repack/testfiles/ublock.bin
@@ -0,0 +1 @@
+abcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrstuvwxyzabcdefghijklmnopqrst \ No newline at end of file
diff --git a/tools/test/h5repack/testh5repack_detect_szip.c b/tools/test/h5repack/testh5repack_detect_szip.c
new file mode 100644
index 0000000..e91b2f7
--- /dev/null
+++ b/tools/test/h5repack/testh5repack_detect_szip.c
@@ -0,0 +1,62 @@
+/* * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * *
+ * Copyright by The HDF Group. *
+ * Copyright by the Board of Trustees of the University of Illinois. *
+ * All rights reserved. *
+ * *
+ * This file is part of HDF5. The full HDF5 copyright notice, including *
+ * terms governing use, modification, and redistribution, is contained in *
+ * the files COPYING and Copyright.html. COPYING can be found at the root *
+ * of the source code distribution tree; Copyright.html can be found at the *
+ * root level of an installed copy of the electronic HDF5 document set and *
+ * is linked from the top-level documents page. It can also be found at *
+ * http://hdfgroup.org/HDF5/doc/Copyright.html. If you do not have *
+ * access to either file, you may request a copy from help@hdfgroup.org. *
+ * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */
+
+#include <stdio.h>
+#include "h5repack.h"
+#include "h5tools.h"
+#include "h5tools_utils.h"
+#include "h5test.h"
+
+
+/* Name of tool */
+#define PROGRAMNAME "h5repack_detect_szip"
+
+/*-------------------------------------------------------------------------
+ * Function: main
+ *
+ * Purpose: detects szip encoder, prints "yes" or "no" to stdout.
+ * Intended to be used in test scripts.
+ *
+ * Return:
+ *
+ * Programmer:
+ *
+ * Date:
+ *
+ * Comments:
+ *
+ * Modifications:
+ *
+ *-------------------------------------------------------------------------
+ */
+
+
+int main(void)
+{
+ h5tools_setprogname(PROGRAMNAME);
+ h5tools_setstatus(EXIT_SUCCESS);
+
+ /* Initialize h5tools lib */
+ h5tools_init();
+
+#ifdef H5_HAVE_FILTER_SZIP
+ if (h5tools_can_encode(H5Z_FILTER_SZIP) == 1) {
+ printf("yes\n");
+ return(1);
+ }
+#endif /* H5_HAVE_FILTER_SZIP */
+ printf("no\n");
+ return(0);
+}