diff options
Diffstat (limited to 'tools/test')
104 files changed, 1296 insertions, 1070 deletions
diff --git a/tools/test/Makefile.in b/tools/test/Makefile.in index dd1d26b..13a8784 100644 --- a/tools/test/Makefile.in +++ b/tools/test/Makefile.in @@ -554,7 +554,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -588,6 +587,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1431,7 +1431,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5copy/CMakeTests.cmake b/tools/test/h5copy/CMakeTests.cmake index 924ade1..f31068b 100644 --- a/tools/test/h5copy/CMakeTests.cmake +++ b/tools/test/h5copy/CMakeTests.cmake @@ -30,6 +30,7 @@ set (LIST_OTHER_TEST_FILES ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.out + ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_misc1.err ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/tudfilter.h5.txt ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/tudfilter.h5_ERR.txt ${HDF5_TOOLS_TEST_H5COPY_SOURCE_DIR}/testfiles/h5copy_plugin_fail_ERR.out.h5.txt @@ -250,6 +251,7 @@ -D "TEST_OUTPUT=./testfiles/${testname}.out.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=./testfiles/${testname}.out" + -D "TEST_ERRREF=./testfiles/${testname}.err" -D "TEST_MASK=true" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) diff --git a/tools/test/h5copy/Makefile.in b/tools/test/h5copy/Makefile.in index 9fd36ed..5f35228 100644 --- a/tools/test/h5copy/Makefile.in +++ b/tools/test/h5copy/Makefile.in @@ -551,7 +551,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -585,6 +584,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1423,7 +1423,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5copy/testfiles/h5copy_misc1.err b/tools/test/h5copy/testfiles/h5copy_misc1.err new file mode 100644 index 0000000..2c2c867 --- /dev/null +++ b/tools/test/h5copy/testfiles/h5copy_misc1.err @@ -0,0 +1 @@ +h5copy error: group </g1> doesn't exist. Use -p to create parent groups. diff --git a/tools/test/h5copy/testfiles/h5copy_misc1.out b/tools/test/h5copy/testfiles/h5copy_misc1.out index 1624f2b..1c7181b 100644 --- a/tools/test/h5copy/testfiles/h5copy_misc1.out +++ b/tools/test/h5copy/testfiles/h5copy_misc1.out @@ -1,3 +1,2 @@ Copying file <./testfiles/h5copytst.h5> and object </simple> to file <./testfiles/h5copy_misc1.out.h5> and object </g1/g2/simple> Error in copy...Exiting -h5copy error: group </g1> doesn't exist. Use -p to create parent groups. diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 203bfef..50758b5 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -60,6 +60,7 @@ $SRC_H5COPY_TESTFILES/h5copy_extlinks_trg.h5 # List of expect files that will be copied over to local test dir LIST_OTHER_TEST_FILES=" $SRC_H5COPY_TESTFILES/h5copy_misc1.out +$SRC_H5COPY_TESTFILES/h5copy_misc1.err " H5COPY=../../src/h5copy/h5copy # The tool name @@ -396,6 +397,7 @@ CMP_OUTPUT() TOOLTEST_FAIL() { expectout="$TESTDIR/$1" + expecterr="$TESTDIR/`basename $1 .out`.err" actualout="$TESTDIR/$1.actualout" actualerr="$TESTDIR/$1.actualerr" actualout_sav=${actualout}-sav @@ -426,10 +428,7 @@ TOOLTEST_FAIL() echo " PASSED" # Verifying output text from h5copy if [ "$expectout" != "SKIP" ]; then - # combine stderr to stdout to compare the output at once. - # We may seperate stdout and stderr later. - cat $actualerr >> $actualout - CMP_OUTPUT $expectout $actualout + CMP_OUTPUT $expecterr $actualerr fi else echo "*FAILED*" diff --git a/tools/test/h5diff/CMakeTests.cmake b/tools/test/h5diff/CMakeTests.cmake index e06f069..1376e0d 100644 --- a/tools/test/h5diff/CMakeTests.cmake +++ b/tools/test/h5diff/CMakeTests.cmake @@ -168,21 +168,12 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_452.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_453.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_454_ERR.err + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/dangling_link.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_455_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_456.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_457_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_458_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459_ERR.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_459_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_465.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_466.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_467.txt @@ -238,7 +229,6 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_63.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_600.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601.txt - ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601_ERR.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_601_ERR.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_603.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_604.txt @@ -293,6 +283,7 @@ ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8625.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_8639.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_ud.txt + ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.err ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_udfail.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_v1.txt ${HDF5_TOOLS_TEST_H5DIFF_SOURCE_DIR}/testfiles/h5diff_v2.txt @@ -400,72 +391,31 @@ endif () endmacro () - macro (ADD_H5_ERR_TEST resultfile resultcode) - # If using memchecker add tests without using scripts - if (HDF5_ENABLE_USING_MEMCHECKER) - add_test (NAME H5DIFF_ERR-${resultfile} COMMAND $<TARGET_FILE:h5diff> --enable-error-stack ${ARGN}) - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") - if (NOT "${resultcode}" STREQUAL "0") - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES WILL_FAIL "true") - endif () - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES DEPENDS ${last_test}) - endif () - else () - # Remove any output file left over from previous test run - add_test ( - NAME H5DIFF_ERR-${resultfile}-clear-objects - COMMAND ${CMAKE_COMMAND} - -E remove - testfiles/${resultfile}_ERR.out - testfiles/${resultfile}_ERR.out.err - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5DIFF_ERR-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) - endif () - add_test ( - NAME H5DIFF_ERR-${resultfile} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - set_tests_properties (H5DIFF_ERR-${resultfile} PROPERTIES DEPENDS H5DIFF_ERR-${resultfile}-clear-objects) - endif () - set (last_test "H5DIFF_ERR-${resultfile}") - endmacro () - macro (ADD_PH5_TEST resultfile resultcode) # If using memchecker add tests without using scripts if (HDF5_ENABLE_USING_MEMCHECKER) - add_test (NAME PH5DIFF-${resultfile} COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:ph5diff> ${MPIEXEC_POSTFLAGS} ${ARGN}) - set_tests_properties (PH5DIFF-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/PAR/testfiles") + add_test (NAME MPI_TEST_H5DIFF-${resultfile} COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:ph5diff> ${MPIEXEC_POSTFLAGS} ${ARGN}) + set_tests_properties (MPI_TEST_H5DIFF-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/PAR/testfiles") if (NOT "${resultcode}" STREQUAL "0") - set_tests_properties (PH5DIFF-${resultfile} PROPERTIES WILL_FAIL "true") + set_tests_properties (MPI_TEST_H5DIFF-${resultfile} PROPERTIES WILL_FAIL "true") endif () if (NOT "${last_test}" STREQUAL "") - set_tests_properties (PH5DIFF-${resultfile} PROPERTIES DEPENDS ${last_test}) + set_tests_properties (MPI_TEST_H5DIFF-${resultfile} PROPERTIES DEPENDS ${last_test}) endif () else () # Remove any output file left over from previous test run add_test ( - NAME PH5DIFF-${resultfile}-clear-objects + NAME MPI_TEST_H5DIFF-${resultfile}-clear-objects COMMAND ${CMAKE_COMMAND} -E remove PAR/testfiles/${resultfile}.out PAR/testfiles/${resultfile}.out.err ) if (NOT "${last_test}" STREQUAL "") - set_tests_properties (PH5DIFF-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) + set_tests_properties (MPI_TEST_H5DIFF-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) endif () add_test ( - NAME PH5DIFF-${resultfile} + NAME MPI_TEST_H5DIFF-${resultfile} COMMAND "${CMAKE_COMMAND}" -D "TEST_PROGRAM=${MPIEXEC_EXECUTABLE};${MPIEXEC_NUMPROC_FLAG};${MPIEXEC_MAX_NUMPROCS};${MPIEXEC_PREFLAGS};$<TARGET_FILE:ph5diff>;${MPIEXEC_POSTFLAGS}" -D "TEST_ARGS:STRING=${ARGN}" @@ -479,7 +429,7 @@ -D "TEST_SORT_COMPARE=TRUE" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) - set_tests_properties (PH5DIFF-${resultfile} PROPERTIES DEPENDS PH5DIFF-${resultfile}-clear-objects) + set_tests_properties (MPI_TEST_H5DIFF-${resultfile} PROPERTIES DEPENDS MPI_TEST_H5DIFF-${resultfile}-clear-objects) set (last_test "PH5DIFF-${resultfile}") endif () endmacro () @@ -529,53 +479,6 @@ endif () endmacro () - macro (ADD_H5_UD_ERR_TEST testname resultcode resultfile) - if (NOT HDF5_ENABLE_USING_MEMCHECKER) - # Remove any output file left over from previous test run - add_test ( - NAME H5DIFF_UD_ERR-${testname}-clearall-objects - COMMAND ${CMAKE_COMMAND} - -E remove - testfiles/${resultfile}_ERR.out - testfiles/${resultfile}_ERR.out.err - ) - if ("${resultcode}" STREQUAL "2") - add_test ( - NAME H5DIFF_UD_ERR-${testname} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff-shared>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH" - -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - else () - add_test ( - NAME H5DIFF_UD_ERR-${testname} - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5diff-shared>" - -D "TEST_ARGS:STRING=--enable-error-stack;${ARGN}" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" - -D "TEST_OUTPUT=${resultfile}_ERR.out" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_REFERENCE=${resultfile}_ERR.txt" - -D "TEST_MASK_ERROR=true" - -D "TEST_APPEND=EXIT CODE:" - -D "TEST_ENV_VAR=HDF5_PLUGIN_PATH" - -D "TEST_ENV_VALUE=${CMAKE_BINARY_DIR}/plugins" - -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" - ) - endif () - set_tests_properties (H5DIFF_UD_ERR-${testname} PROPERTIES DEPENDS H5DIFF_UD_ERR-${testname}-clearall-objects) - endif () - endmacro () - ############################################################################## ############################################################################## ### T H E T E S T S ### @@ -798,26 +701,16 @@ h5diff_453.out.err h5diff_454.out h5diff_454.out.err - h5diff_454_ERR.out - h5diff_454_ERR.out.err h5diff_455.out h5diff_455.out.err - h5diff_455_ERR.out - h5diff_455_ERR.out.err h5diff_456.out h5diff_456.out.err h5diff_457.out h5diff_457.out.err - h5diff_457_ERR.out - h5diff_457_ERR.out.err h5diff_458.out h5diff_458.out.err - h5diff_458_ERR.out - h5diff_458_ERR.out.err h5diff_459.out h5diff_459.out.err - h5diff_459_ERR.out - h5diff_459_ERR.out.err h5diff_465.out h5diff_465.out.err h5diff_466.out @@ -922,8 +815,6 @@ h5diff_600.out.err h5diff_601.out h5diff_601.out.err - h5diff_601_ERR.out - h5diff_601_ERR.out.err h5diff_603.out h5diff_603.out.err h5diff_604.out @@ -1181,7 +1072,6 @@ ADD_H5_TEST (h5diff_600 1 ${FILE1}) # 6.1: Check if non-exist object name is specified ADD_H5_TEST (h5diff_601 2 ${FILE1} ${FILE1} nono_obj) -ADD_H5_ERR_TEST (h5diff_601 2 ${FILE1} ${FILE1} nono_obj) # ############################################################################## # # -d @@ -1481,26 +1371,21 @@ ADD_H5_TEST (h5diff_453 2 --follow-symlinks -v --no-dangling-links ${FILE13} $ # dangling link found for soft links (obj to obj) ADD_H5_TEST (h5diff_454 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_dset2 /softlink_noexist) -ADD_H5_ERR_TEST (h5diff_454 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_dset2 /softlink_noexist) # dangling link found for soft links (obj to obj) Both dangle links ADD_H5_TEST (h5diff_455 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_noexist /softlink_noexist) -ADD_H5_ERR_TEST (h5diff_455 2 --follow-symlinks -v --no-dangling-links ${FILE13} ${FILE13} /softlink_noexist /softlink_noexist) # dangling link found for ext links (FILE to FILE) ADD_H5_TEST (h5diff_456 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15}) # dangling link found for ext links (obj to obj). target file exist ADD_H5_TEST (h5diff_457 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist1) -ADD_H5_ERR_TEST (h5diff_457 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist1) # dangling link found for ext links (obj to obj). target file NOT exist ADD_H5_TEST (h5diff_458 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist2) -ADD_H5_ERR_TEST (h5diff_458 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_dset1 /ext_link_noexist2) # dangling link found for ext links (obj to obj). Both dangle links ADD_H5_TEST (h5diff_459 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_noexist1 /ext_link_noexist2) -ADD_H5_ERR_TEST (h5diff_459 2 --follow-symlinks -v --no-dangling-links ${FILE15} ${FILE15} /ext_link_noexist1 /ext_link_noexist2) # dangling link --follow-symlinks (obj vs obj) # (HDFFV-7836) diff --git a/tools/test/h5diff/Makefile.in b/tools/test/h5diff/Makefile.in index ddb6842..2e46a50 100644 --- a/tools/test/h5diff/Makefile.in +++ b/tools/test/h5diff/Makefile.in @@ -566,7 +566,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -600,6 +599,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1473,7 +1473,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index 212f5d6..341cba5 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -62,6 +62,7 @@ LIST_HDF5_TEST_FILES=" $SRC_H5DIFF_TESTFILES/tudfilter.h5 $SRC_H5DIFF_TESTFILES/tudfilter2.h5 $SRC_H5DIFF_TESTFILES/h5diff_ud.txt +$SRC_H5DIFF_TESTFILES/h5diff_udfail.err $SRC_H5DIFF_TESTFILES/h5diff_udfail.txt " @@ -204,7 +205,7 @@ VERIFY() { TOOLTEST() { expect="$TESTDIR/$1" actual="$TESTDIR/`basename $1 .txt`.out" - actual_err="$TESTDIR/`basename $1 .txt`.err" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -287,6 +288,90 @@ TOOLTEST() { rm -f $actual_sorted $expect_sorted fi } +# Same as TOOLSET except only err file checked +TOOLTEST_ERR() { + expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .txt`.err" + actual="$TESTDIR/`basename $1 .txt`.out" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + shift + if test -n "$pmode"; then + RUNCMD=$RUNPARALLEL + else + RUNCMD=$RUNSERIAL + fi + + # Run test. + TESTING $H5DIFF $@ + ( + #echo "#############################" + #echo "Expected output for '$H5DIFF $@'" + #echo "#############################" + cd $TESTDIR + eval $ENVCMD $RUNCMD $H5DIFF_BIN "$@" + ) >$actual 2>$actual_err + EXIT_CODE=$? + # save actual and actual_err in case they are needed later. + cp $actual $actual_sav + STDOUT_FILTER $actual + cp $actual_err $actual_err_sav + STDERR_FILTER $actual_err + # don't add exit code check in pmode, as it causes failure. (exit code + # is from mpirun not tool) + # if any problem occurs relate to an exit code, it will be caught in + # serial mode, so the test is fullfilled. + if test $h5haveexitcode = 'yes' -a -z "$pmode"; then + echo "EXIT CODE: $EXIT_CODE" >> $actual + fi + + if [ ! -f $expect ]; then + # Create the expect file if it doesn't yet exist. + echo " CREATED" + cp $actual $expect + echo " Expected result (*.ddl) missing" + nerrors="`expr $nerrors + 1`" + elif $CMP $expect_err $actual_err; then + echo " PASSED" + elif test $h5haveexitcode = 'yes' -a -z "$pmode"; then + echo "*FAILED*" + echo " Expected result ($expect_err) differs from actual result ($actual_err)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /' + else + # parallel mode output are often of different ordering from serial + # output. If the sorted expect_err and actual_err files compare the same, + # it is safe to assume the actual output match the expected file. + expect_sorted=expect_sorted + actual_sorted=actual_sorted + sort $expect_err -o $expect_sorted + sort $actual_err -o $actual_sorted + mv $expect_sorted.noexit $expect_sorted + if $CMP $expect_sorted $actual_sorted; then + echo " PASSED" + else + echo "*FAILED*" + nerrors="`expr $nerrors + 1`" + if test yes = "$verbose"; then + echo "====Expected result ($expect_sorted) differs from actual result ($actual_sorted)" + $DIFF $expect_sorted $actual_sorted |sed 's/^/ /' + echo "====The actual output ($actual_sav)" + sed 's/^/ /' < $actual_sav + echo "====The actual stderr ($actual_err_sav)" + sed 's/^/ /' < $actual_err_sav + echo "====End of actual stderr ($actual_err_sav)" + echo "" + fi + fi + fi + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + rm -f $actual $actual_err $actual_sav $actual_err_sav + rm -f $actual_sorted $expect_sorted + fi +} ############################################################################## ### T H E T E S T S diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c index 7321c66..ac3bbee 100644 --- a/tools/test/h5diff/h5diffgentest.c +++ b/tools/test/h5diff/h5diffgentest.c @@ -11,8 +11,6 @@ * help@hdfgroup.org. * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * */ -#include <stdio.h> -#include <stdlib.h> #include "hdf5.h" #include "H5private.h" diff --git a/tools/test/h5diff/testfiles/h5diff_459_ERR.err b/tools/test/h5diff/testfiles/dangling_link.err index 82802a1..82802a1 100644 --- a/tools/test/h5diff/testfiles/h5diff_459_ERR.err +++ b/tools/test/h5diff/testfiles/dangling_link.err diff --git a/tools/test/h5diff/testfiles/h5diff_454_ERR.err b/tools/test/h5diff/testfiles/h5diff_454_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_454_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_454_ERR.txt b/tools/test/h5diff/testfiles/h5diff_454_ERR.txt deleted file mode 100644 index 4501071..0000000 --- a/tools/test/h5diff/testfiles/h5diff_454_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </softlink_noexist> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_455_ERR.err b/tools/test/h5diff/testfiles/h5diff_455_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_455_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_455_ERR.txt b/tools/test/h5diff/testfiles/h5diff_455_ERR.txt deleted file mode 100644 index 4501071..0000000 --- a/tools/test/h5diff/testfiles/h5diff_455_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </softlink_noexist> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_457_ERR.err b/tools/test/h5diff/testfiles/h5diff_457_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_457_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_457_ERR.txt b/tools/test/h5diff/testfiles/h5diff_457_ERR.txt deleted file mode 100644 index 9d73750..0000000 --- a/tools/test/h5diff/testfiles/h5diff_457_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist1> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_458_ERR.err b/tools/test/h5diff/testfiles/h5diff_458_ERR.err deleted file mode 100644 index 82802a1..0000000 --- a/tools/test/h5diff/testfiles/h5diff_458_ERR.err +++ /dev/null @@ -1,4 +0,0 @@ -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function diff --git a/tools/test/h5diff/testfiles/h5diff_458_ERR.txt b/tools/test/h5diff/testfiles/h5diff_458_ERR.txt deleted file mode 100644 index b084914..0000000 --- a/tools/test/h5diff/testfiles/h5diff_458_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist2> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_459_ERR.txt b/tools/test/h5diff/testfiles/h5diff_459_ERR.txt deleted file mode 100644 index 9d73750..0000000 --- a/tools/test/h5diff/testfiles/h5diff_459_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Warning: </ext_link_noexist1> is a dangling link. -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): treat dangling link as error - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_600.txt b/tools/test/h5diff/testfiles/h5diff_600.txt index f3b346a..13d627c 100644 --- a/tools/test/h5diff/testfiles/h5diff_600.txt +++ b/tools/test/h5diff/testfiles/h5diff_600.txt @@ -142,5 +142,4 @@ usage: h5diff [OPTIONS] file1 file2 [obj1[ obj2]] Use h5diff file1 file1 /g1/dset1 /g1/dset2 to compare '/g1/dset1' and '/g1/dset2' in the same file -h5diff error: missing file names EXIT CODE: 1 diff --git a/tools/test/h5diff/testfiles/h5diff_601_ERR.txt b/tools/test/h5diff/testfiles/h5diff_601_ERR.txt deleted file mode 100644 index b58124a..0000000 --- a/tools/test/h5diff/testfiles/h5diff_601_ERR.txt +++ /dev/null @@ -1,6 +0,0 @@ -Object </nono_obj> could not be found in <h5diff_basic1.h5> -H5tools-DIAG: Error detected in HDF5:tools (version (number)) thread (IDs): - #000: (file name) line (number) in h5diff(): Error: Object could not be found - major: Failure in tools library - minor: error in function -EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_udfail.err b/tools/test/h5diff/testfiles/h5diff_udfail.err new file mode 100644 index 0000000..d51de38 --- /dev/null +++ b/tools/test/h5diff/testfiles/h5diff_udfail.err @@ -0,0 +1,12 @@ + +file1 file2 +--------------------------------------- + x x / + x x /dynlibud + +group : </> and </> +0 differences found +dataset: </dynlibud> and </dynlibud> +0 differences found +Warning: dataset </dynlibud> cannot be read, user defined filter is not available +EXIT CODE: 2 diff --git a/tools/test/h5diff/testfiles/h5diff_udfail.txt b/tools/test/h5diff/testfiles/h5diff_udfail.txt index d51de38..e6000fc 100644 --- a/tools/test/h5diff/testfiles/h5diff_udfail.txt +++ b/tools/test/h5diff/testfiles/h5diff_udfail.txt @@ -8,5 +8,4 @@ group : </> and </> 0 differences found dataset: </dynlibud> and </dynlibud> 0 differences found -Warning: dataset </dynlibud> cannot be read, user defined filter is not available EXIT CODE: 2 diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index c464f94..557d2ff 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -226,6 +226,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_451.txt $SRC_H5DIFF_TESTFILES/h5diff_452.txt $SRC_H5DIFF_TESTFILES/h5diff_453.txt $SRC_H5DIFF_TESTFILES/h5diff_454.txt +$SRC_H5DIFF_TESTFILES/dangling_link.err $SRC_H5DIFF_TESTFILES/h5diff_455.txt $SRC_H5DIFF_TESTFILES/h5diff_456.txt $SRC_H5DIFF_TESTFILES/h5diff_457.txt @@ -286,6 +287,7 @@ $SRC_H5DIFF_TESTFILES/h5diff_62.txt $SRC_H5DIFF_TESTFILES/h5diff_63.txt $SRC_H5DIFF_TESTFILES/h5diff_600.txt $SRC_H5DIFF_TESTFILES/h5diff_601.txt +$SRC_H5DIFF_TESTFILES/h5diff_601_ERR.err $SRC_H5DIFF_TESTFILES/h5diff_603.txt $SRC_H5DIFF_TESTFILES/h5diff_604.txt $SRC_H5DIFF_TESTFILES/h5diff_605.txt @@ -462,8 +464,9 @@ TESTING() { # TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .txt`.err" actual="$TESTDIR/`basename $1 .txt`.out" - actual_err="$TESTDIR/`basename $1 .txt`.err" + actual_err="$TESTDIR/`basename $1 .txt`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -488,7 +491,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in diff --git a/tools/test/h5dump/CMakeLists.txt b/tools/test/h5dump/CMakeLists.txt index 4c409e8..51938ae 100644 --- a/tools/test/h5dump/CMakeLists.txt +++ b/tools/test/h5dump/CMakeLists.txt @@ -4,29 +4,31 @@ project (HDF5_TOOLS_TEST_H5DUMP C) #----------------------------------------------------------------------------- # If plugin library tests can be tested #----------------------------------------------------------------------------- -set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibdump") -set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") -set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) - -add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_dump.c) -target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") -TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) -target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) -H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") - -# make plugins dir -file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") -#----------------------------------------------------------------------------- -# Copy plugin library to a plugins folder -#----------------------------------------------------------------------------- -add_custom_command ( - TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different - "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" - "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" -) +if (BUILD_SHARED_LIBS) + set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibdump") + set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") + set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) + + add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_dump.c) + target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) + target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) + H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") + + # make plugins dir + file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") + #----------------------------------------------------------------------------- + # Copy plugin library to a plugins folder + #----------------------------------------------------------------------------- + add_custom_command ( + TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} + POST_BUILD + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different + "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + ) +endif () # -------------------------------------------------------------------- # Add the h5dump test executable diff --git a/tools/test/h5dump/CMakeTests.cmake b/tools/test/h5dump/CMakeTests.cmake index f74ee50..126d972 100644 --- a/tools/test/h5dump/CMakeTests.cmake +++ b/tools/test/h5dump/CMakeTests.cmake @@ -748,10 +748,10 @@ -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) set_tests_properties (H5DUMP-IMPORT-${resultfile} PROPERTIES DEPENDS "H5DUMP-IMPORT-${resultfile}-clear-objects") - add_test (NAME H5DUMP-IMPORT-h5import-${resultfile} COMMAND h5import ${resultfile}.bin -c ${conffile}.out -o ${resultfile}.h5) + add_test (NAME H5DUMP-IMPORT-h5import-${resultfile} COMMAND $<TARGET_FILE:h5import> ${resultfile}.bin -c ${conffile}.out -o ${resultfile}.h5) set_tests_properties (H5DUMP-IMPORT-h5import-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std") set_tests_properties (H5DUMP-IMPORT-h5import-${resultfile} PROPERTIES DEPENDS H5DUMP-IMPORT-${resultfile}) - add_test (NAME H5DUMP-IMPORT-h5diff-${resultfile} COMMAND h5diff ${testfile} ${resultfile}.h5 /integer /integer) + add_test (NAME H5DUMP-IMPORT-h5diff-${resultfile} COMMAND $<TARGET_FILE:h5diff> ${testfile} ${resultfile}.h5 /integer /integer) set_tests_properties (H5DUMP-IMPORT-h5diff-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles/std") set_tests_properties (H5DUMP-IMPORT-h5diff-${resultfile} PROPERTIES DEPENDS H5DUMP-IMPORT-h5import-${resultfile}) endif () @@ -1544,4 +1544,6 @@ ############################################################################## ### P L U G I N T E S T S ############################################################################## -ADD_H5_UD_TEST (h5dump_plugin_test 0 tudfilter --enable-error-stack tudfilter.h5) +if (BUILD_SHARED_LIBS) + ADD_H5_UD_TEST (h5dump_plugin_test 0 tudfilter --enable-error-stack tudfilter.h5) +endif () diff --git a/tools/test/h5dump/Makefile.in b/tools/test/h5dump/Makefile.in index fd4d7b0..8cf3c69 100644 --- a/tools/test/h5dump/Makefile.in +++ b/tools/test/h5dump/Makefile.in @@ -572,7 +572,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -606,6 +605,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1478,7 +1478,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5dump/errfiles/tall-1.err b/tools/test/h5dump/errfiles/tall-1.err index 9733453..f4c2d91 100644 --- a/tools/test/h5dump/errfiles/tall-1.err +++ b/tools/test/h5dump/errfiles/tall-1.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/tall-2A.err b/tools/test/h5dump/errfiles/tall-2A.err index 9733453..f4c2d91 100644 --- a/tools/test/h5dump/errfiles/tall-2A.err +++ b/tools/test/h5dump/errfiles/tall-2A.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/tall-2A0.err b/tools/test/h5dump/errfiles/tall-2A0.err index 9733453..f4c2d91 100644 --- a/tools/test/h5dump/errfiles/tall-2A0.err +++ b/tools/test/h5dump/errfiles/tall-2A0.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/tall-2B.err b/tools/test/h5dump/errfiles/tall-2B.err index 9733453..f4c2d91 100644 --- a/tools/test/h5dump/errfiles/tall-2B.err +++ b/tools/test/h5dump/errfiles/tall-2B.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'somefile' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'somefile', temp_file_name = 'somefile' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/tdset-2.err b/tools/test/h5dump/errfiles/tdset-2.err index d00a92b..e61966f 100644 --- a/tools/test/h5dump/errfiles/tdset-2.err +++ b/tools/test/h5dump/errfiles/tdset-2.err @@ -21,19 +21,16 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Lget_info(): unable to get link info major: Links minor: Can't get value - #001: (file name) line (number) in H5L__get_info(): unable to get link info for: 'dset3' - major: Links - minor: Can't get value - #002: (file name) line (number) in H5L_get_info(): name doesn't exist + #001: (file name) line (number) in H5L_get_info(): name doesn't exist major: Links minor: Object already exists - #003: (file name) line (number) in H5G_traverse(): internal path traversal failed + #002: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G__traverse_real(): traversal operator failed + #003: (file name) line (number) in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed - #005: (file name) line (number) in H5L__get_info_cb(): name doesn't exist + #004: (file name) line (number) in H5L__get_info_cb(): name doesn't exist major: Links minor: Object not found h5dump error: unable to get link info from "dset3" diff --git a/tools/test/h5dump/errfiles/textlink.err b/tools/test/h5dump/errfiles/textlink.err index 99e8530..4a5f545 100644 --- a/tools/test/h5dump/errfiles/textlink.err +++ b/tools/test/h5dump/errfiles/textlink.err @@ -2,61 +2,55 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'filename' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'filename' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'filename', temp_file_name = 'filename' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'filename', temp_file_name = 'filename' major: File accessibilty minor: Unable to open file HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'anotherfile' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'anotherfile' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'anotherfile', temp_file_name = 'anotherfile' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'anotherfile', temp_file_name = 'anotherfile' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/textlinkfar.err b/tools/test/h5dump/errfiles/textlinkfar.err index a888ba9..1f9241a 100644 --- a/tools/test/h5dump/errfiles/textlinkfar.err +++ b/tools/test/h5dump/errfiles/textlinkfar.err @@ -2,52 +2,49 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open object + #007: (file name) line (number) in H5L__extern_traverse(): unable to open object major: Links minor: Can't open object - #009: (file name) line (number) in H5O_open_name(): object not found + #008: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #010: (file name) line (number) in H5G_loc_find(): can't find object + #009: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #011: (file name) line (number) in H5G_traverse(): internal path traversal failed + #010: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #012: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #011: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #013: (file name) line (number) in H5G__traverse_special(): symbolic link traversal failed + #012: (file name) line (number) in H5G__traverse_special(): symbolic link traversal failed major: Links minor: Link traversal failure - #014: (file name) line (number) in H5G__traverse_slink(): unable to follow symbolic link + #013: (file name) line (number) in H5G__traverse_slink(): unable to follow symbolic link major: Symbol table minor: Object not found - #015: (file name) line (number) in H5G__traverse_real(): traversal operator failed + #014: (file name) line (number) in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed - #016: (file name) line (number) in H5G__traverse_slink_cb(): component not found + #015: (file name) line (number) in H5G__traverse_slink_cb(): component not found major: Symbol table minor: Object not found HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): diff --git a/tools/test/h5dump/errfiles/textlinksrc.err b/tools/test/h5dump/errfiles/textlinksrc.err index a888ba9..1f9241a 100644 --- a/tools/test/h5dump/errfiles/textlinksrc.err +++ b/tools/test/h5dump/errfiles/textlinksrc.err @@ -2,52 +2,49 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open object + #007: (file name) line (number) in H5L__extern_traverse(): unable to open object major: Links minor: Can't open object - #009: (file name) line (number) in H5O_open_name(): object not found + #008: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #010: (file name) line (number) in H5G_loc_find(): can't find object + #009: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #011: (file name) line (number) in H5G_traverse(): internal path traversal failed + #010: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #012: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #011: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #013: (file name) line (number) in H5G__traverse_special(): symbolic link traversal failed + #012: (file name) line (number) in H5G__traverse_special(): symbolic link traversal failed major: Links minor: Link traversal failure - #014: (file name) line (number) in H5G__traverse_slink(): unable to follow symbolic link + #013: (file name) line (number) in H5G__traverse_slink(): unable to follow symbolic link major: Symbol table minor: Object not found - #015: (file name) line (number) in H5G__traverse_real(): traversal operator failed + #014: (file name) line (number) in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed - #016: (file name) line (number) in H5G__traverse_slink_cb(): component not found + #015: (file name) line (number) in H5G__traverse_slink_cb(): component not found major: Symbol table minor: Object not found HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): diff --git a/tools/test/h5dump/errfiles/torderlinks1.err b/tools/test/h5dump/errfiles/torderlinks1.err index 22b4318..648906b 100644 --- a/tools/test/h5dump/errfiles/torderlinks1.err +++ b/tools/test/h5dump/errfiles/torderlinks1.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'fname' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'fname' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'fname', temp_file_name = 'fname' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'fname', temp_file_name = 'fname' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/torderlinks2.err b/tools/test/h5dump/errfiles/torderlinks2.err index 22b4318..648906b 100644 --- a/tools/test/h5dump/errfiles/torderlinks2.err +++ b/tools/test/h5dump/errfiles/torderlinks2.err @@ -2,30 +2,27 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Oopen(): unable to open object major: Object header minor: Can't open object - #001: (file name) line (number) in H5O__open_name(): unable to open object - major: Object header - minor: Can't open object - #002: (file name) line (number) in H5O_open_name(): object not found + #001: (file name) line (number) in H5O_open_name(): object not found major: Object header minor: Object not found - #003: (file name) line (number) in H5G_loc_find(): can't find object + #002: (file name) line (number) in H5G_loc_find(): can't find object major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G_traverse(): internal path traversal failed + #003: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #005: (file name) line (number) in H5G__traverse_real(): special link traversal failed + #004: (file name) line (number) in H5G__traverse_real(): special link traversal failed major: Links minor: Link traversal failure - #006: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed + #005: (file name) line (number) in H5G__traverse_special(): user-defined link traversal failed major: Links minor: Link traversal failure - #007: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID + #006: (file name) line (number) in H5G__traverse_ud(): traversal callback returned invalid ID major: Symbol table minor: Unable to find atom information (already closed?) - #008: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'fname' + #007: (file name) line (number) in H5L__extern_traverse(): unable to open external file, external link file name = 'fname' major: Links minor: Unable to open file - #009: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'fname', temp_file_name = 'fname' + #008: (file name) line (number) in H5F_prefix_open_file(): unable to open file, file name = 'fname', temp_file_name = 'fname' major: File accessibilty minor: Unable to open file diff --git a/tools/test/h5dump/errfiles/tperror.err b/tools/test/h5dump/errfiles/tperror.err index 55aeb4a..733b652 100644 --- a/tools/test/h5dump/errfiles/tperror.err +++ b/tools/test/h5dump/errfiles/tperror.err @@ -21,19 +21,16 @@ HDF5-DIAG: Error detected in HDF5 (version (number)) thread (IDs): #000: (file name) line (number) in H5Lget_info(): unable to get link info major: Links minor: Can't get value - #001: (file name) line (number) in H5L__get_info(): unable to get link info for: 'bogus' - major: Links - minor: Can't get value - #002: (file name) line (number) in H5L_get_info(): name doesn't exist + #001: (file name) line (number) in H5L_get_info(): name doesn't exist major: Links minor: Object already exists - #003: (file name) line (number) in H5G_traverse(): internal path traversal failed + #002: (file name) line (number) in H5G_traverse(): internal path traversal failed major: Symbol table minor: Object not found - #004: (file name) line (number) in H5G__traverse_real(): traversal operator failed + #003: (file name) line (number) in H5G__traverse_real(): traversal operator failed major: Symbol table minor: Callback failed - #005: (file name) line (number) in H5L__get_info_cb(): name doesn't exist + #004: (file name) line (number) in H5L__get_info_cb(): name doesn't exist major: Links minor: Object not found h5dump error: unable to get link info from "bogus" diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c index aaf5c3e..fe43ecd 100644 --- a/tools/test/h5dump/h5dumpgentest.c +++ b/tools/test/h5dump/h5dumpgentest.c @@ -9528,15 +9528,13 @@ gent_intattrscalars(void) } /*------------------------------------------------------------------------- - * Function: gent_packedbits + * Function: gent_intsattrs * - * Purpose: Generate a file to be used in the h5dump packed bits tests. + * Purpose: Generate a file to be used in the h5dump tests. * Four datasets of 1, 2, 4 and 8 bytes of unsigned int types are created. * Four more datasets of 1, 2, 4 and 8 bytes of signed int types are created. * Fill them with raw data such that no bit will be all zero in a dataset. * A dummy dataset of double type is created for failure test. - * Created: Albert Cheng, 2010/5/10. - * Modified: Allen Byrne, 2011/1/5 Use file to test Signed/Unsigned datatypes *------------------------------------------------------------------------- */ static void diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index 1935b0d..9b1543c 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -488,7 +488,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -532,7 +531,6 @@ TOOLTEST2() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -591,7 +589,6 @@ TOOLTEST2A() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -658,7 +655,6 @@ TOOLTEST2B() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expectdata ]; then # Create the expect data file if it doesn't yet exist. @@ -715,7 +711,6 @@ TOOLTEST3() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -774,7 +769,6 @@ TOOLTEST4() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -840,7 +834,6 @@ TOOLTEST5() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -884,7 +877,6 @@ TOOLTEST_HELP() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expectdata ]; then # Create the expect data file if it doesn't yet exist. diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index 9cf5c99..febce2c 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -235,7 +235,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -278,7 +277,6 @@ TOOLTEST2() { cd $TESTDIR $RUNSERIAL $DUMPER_BIN "$@" ) >$actual 2>$actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -348,7 +346,6 @@ TOOLTEST3() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. @@ -406,7 +403,6 @@ TOOLTEST4() { -e 's/H5Eget_auto[1-2]*/H5Eget_auto(1 or 2)/' \ -e 's/H5Eset_auto[1-2]*/H5Eset_auto(1 or 2)/' \ $actual_err > $actual_ext - #cat $actual_ext >> $actual if [ ! -f $expect ]; then # Create the expect file if it doesn't yet exist. diff --git a/tools/test/h5format_convert/CMakeTests.cmake b/tools/test/h5format_convert/CMakeTests.cmake index 2240813..5792d40 100644 --- a/tools/test/h5format_convert/CMakeTests.cmake +++ b/tools/test/h5format_convert/CMakeTests.cmake @@ -22,10 +22,8 @@ set (HDF5_REFERENCE_FILES h5fc_help.ddl h5fc_nooption.ddl - h5fc_nonexistfile.ddl h5fc_d_file.ddl h5fc_dname.ddl - h5fc_nonexistdset_file.ddl h5fc_v_non_chunked.ddl h5fc_v_bt1.ddl h5fc_v_ndata_bt1.ddl @@ -49,6 +47,12 @@ h5fc_v_err.ddl h5fc_v_err.ddl.err ) + set (HDF5_REFERENCE_ERR_FILES + h5fc_d_file.ddl.err + h5fc_dname.err + h5fc_nonexistfile.ddl.err + h5fc_nonexistdset_file.ddl.err + ) set (HDF5_REFERENCE_TEST_FILES h5fc_non_v3.h5 h5fc_edge_v3.h5 @@ -78,6 +82,10 @@ HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${ddl_file}" "${PROJECT_BINARY_DIR}/testfiles/${ddl_file}" "h5fc_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5fc_files") + endforeach () + foreach (h5_file ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5fc_files") endforeach () @@ -119,6 +127,7 @@ -D "TEST_OUTPUT=${testname}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_REFERENCE=${resultfile}" + -D "TEST_ERRREF=${resultfile}.err" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) set_tests_properties (H5FC-${testname}-${testfile} PROPERTIES DEPENDS "H5FC-${testname}-${testfile}-tmpfile") @@ -141,6 +150,42 @@ endif () endmacro () + macro (ADD_H5_NOERR_OUTPUT testname resultfile resultcode testfile) + # If using memchecker add tests without using scripts + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5FC-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + ./testfiles/outtmp.h5 + ./testfiles/${testname}.out + ./testfiles/${testname}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5FC-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5FC-${testname}-${testfile}-tmpfile + COMMAND ${CMAKE_COMMAND} + -E copy_if_different ${HDF5_TOOLS_TEST_H5FC_SOURCE_DIR}/testfiles/${testfile} ./testfiles/outtmp.h5 + ) + set_tests_properties (H5FC-${testname}-${testfile}-tmpfile PROPERTIES DEPENDS "H5FC-${testname}-clear-objects") + add_test ( + NAME H5FC-${testname}-${testfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5format_convert>" + -D "TEST_ARGS=${ARGN};outtmp.h5" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5FC-${testname}-${testfile} PROPERTIES DEPENDS "H5FC-${testname}-${testfile}-tmpfile") + set (last_test "H5FC-${testname}-${testfile}") + endif () + endmacro () + macro (ADD_H5_MASK_OUTPUT testname resultfile resultcode testfile) # If using memchecker add tests without using scripts if (NOT HDF5_ENABLE_USING_MEMCHECKER) @@ -433,17 +478,17 @@ # h5format_convert -d /GROUP/DSET_BT2 --verbose old_h5fc_ext_none.h5 (verbose, bt1 dataset) # h5format_convert -d /DSET_NDATA_BT2 -v -n old_h5fc_ext_none.h5 (verbose, noop, bt1+nodata dataset) # h5format_convert -v old_h5fc_ext_none.h5 (verbose, all datasets) - ADD_H5_OUTPUT (h5fc_v_non_chunked h5fc_v_non_chunked.ddl 0 old_h5fc_ext_none.h5 -d /DSET_CONTIGUOUS -v) - ADD_H5_OUTPUT (h5fc_v_bt1 h5fc_v_bt1.ddl 0 old_h5fc_ext_none.h5 -d /GROUP/DSET_BT2 --verbose) - ADD_H5_OUTPUT (h5fc_v_ndata_bt1 h5fc_v_ndata_bt1.ddl 0 old_h5fc_ext_none.h5 -d /DSET_NDATA_BT2 -v -n) - ADD_H5_OUTPUT (h5fc_v_all h5fc_v_all.ddl 0 old_h5fc_ext_none.h5 -v) + ADD_H5_NOERR_OUTPUT (h5fc_v_non_chunked h5fc_v_non_chunked.ddl 0 old_h5fc_ext_none.h5 -d /DSET_CONTIGUOUS -v) + ADD_H5_NOERR_OUTPUT (h5fc_v_bt1 h5fc_v_bt1.ddl 0 old_h5fc_ext_none.h5 -d /GROUP/DSET_BT2 --verbose) + ADD_H5_NOERR_OUTPUT (h5fc_v_ndata_bt1 h5fc_v_ndata_bt1.ddl 0 old_h5fc_ext_none.h5 -d /DSET_NDATA_BT2 -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_all h5fc_v_all.ddl 0 old_h5fc_ext_none.h5 -v) # # # # h5format_convert -d /DSET_EA -v -n h5fc_ext_none.h5 (verbose, noop, one ea dataset) # h5format_convert -v -n h5fc_non_v3.h5 (verbose, noop, all datasets) - ADD_H5_OUTPUT (h5fc_v_n_1d h5fc_v_n_1d.ddl 0 h5fc_ext_none.h5 -d /DSET_EA -v -n) - ADD_H5_OUTPUT (h5fc_v_n_all h5fc_v_n_all.ddl 0 h5fc_non_v3.h5 -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_n_1d h5fc_v_n_1d.ddl 0 h5fc_ext_none.h5 -d /DSET_EA -v -n) + ADD_H5_NOERR_OUTPUT (h5fc_v_n_all h5fc_v_n_all.ddl 0 h5fc_non_v3.h5 -v -n) # # # diff --git a/tools/test/h5format_convert/Makefile.in b/tools/test/h5format_convert/Makefile.in index 3f0005a..da61977 100644 --- a/tools/test/h5format_convert/Makefile.in +++ b/tools/test/h5format_convert/Makefile.in @@ -555,7 +555,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -589,6 +588,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1434,7 +1434,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5format_convert/h5fc_gentest.c b/tools/test/h5format_convert/h5fc_gentest.c index 8c873be..b482dee 100644 --- a/tools/test/h5format_convert/h5fc_gentest.c +++ b/tools/test/h5format_convert/h5fc_gentest.c @@ -14,7 +14,7 @@ /* * Generate the binary hdf5 files for the h5format_convert tests. * Usage: just execute the program without any arguments will - * generate all the binary hdf5 files + * generate all the binary hdf5 files * * If you regenerate the test files (e.g., changing some code, * trying it on a new platform, ...), you need to verify the correctness @@ -24,71 +24,71 @@ #include "hdf5.h" #include "H5private.h" -#define NON_V3_FILE "h5fc_non_v3.h5" -#define EDGE_V3_FILE "h5fc_edge_v3.h5" -#define ERR_LEVEL_FILE "h5fc_err_level.h5" +#define NON_V3_FILE "h5fc_non_v3.h5" +#define EDGE_V3_FILE "h5fc_edge_v3.h5" +#define ERR_LEVEL_FILE "h5fc_err_level.h5" const char *FILENAME[] = { - "h5fc_ext1_i.h5", /* 0 */ - "h5fc_ext1_s.h5", /* 1 */ - "h5fc_ext1_f.h5", /* 2 */ - "h5fc_ext2_is.h5", /* 3 */ - "h5fc_ext2_if.h5", /* 4 */ - "h5fc_ext2_sf.h5", /* 5 */ - "h5fc_ext3_isf.h5", /* 6 */ - "h5fc_ext_none.h5", /* 7 */ + "h5fc_ext1_i.h5", /* 0 */ + "h5fc_ext1_s.h5", /* 1 */ + "h5fc_ext1_f.h5", /* 2 */ + "h5fc_ext2_is.h5", /* 3 */ + "h5fc_ext2_if.h5", /* 4 */ + "h5fc_ext2_sf.h5", /* 5 */ + "h5fc_ext3_isf.h5", /* 6 */ + "h5fc_ext_none.h5", /* 7 */ NULL }; -#define GROUP "GROUP" +#define GROUP "GROUP" -#define DSET_COMPACT "DSET_COMPACT" -#define DSET_CONTIGUOUS "DSET_CONTIGUOUS" +#define DSET_COMPACT "DSET_COMPACT" +#define DSET_CONTIGUOUS "DSET_CONTIGUOUS" -#define DSET_EA "DSET_EA" -#define DSET_NDATA_EA "DSET_NDATA_EA" -#define DSET_BT2 "DSET_BT2" -#define DSET_NDATA_BT2 "DSET_NDATA_BT2" -#define DSET_FA "DSET_FA" -#define DSET_NDATA_FA "DSET_NDATA_FA" -#define DSET_NONE "DSET_NONE" -#define DSET_NDATA_NONE "DSET_NDATA_NONE" +#define DSET_EA "DSET_EA" +#define DSET_NDATA_EA "DSET_NDATA_EA" +#define DSET_BT2 "DSET_BT2" +#define DSET_NDATA_BT2 "DSET_NDATA_BT2" +#define DSET_FA "DSET_FA" +#define DSET_NDATA_FA "DSET_NDATA_FA" +#define DSET_NONE "DSET_NONE" +#define DSET_NDATA_NONE "DSET_NDATA_NONE" -#define DSET_EDGE "DSET_EDGE" -#define DSET_ERR "DSET_ERR" +#define DSET_EDGE "DSET_EDGE" +#define DSET_ERR "DSET_ERR" #define ISTORE_IK 64 -#define ISTORE_ERR 1 +#define ISTORE_ERR 1 #define NUM 500 /* - * Function: gen_non() + * Function: gen_non() * * Create a file with SWMR write+non-latest-format--this will result in v3 superbock+latest version support: - * 1) 1 chunked dataset with extensible array chunk indexing type (without data) - * 2) 1 chunked dataset with version 2 B-tree chunk indexing type (with data) + * 1) 1 chunked dataset with extensible array chunk indexing type (without data) + * 2) 1 chunked dataset with version 2 B-tree chunk indexing type (with data) * Re-open the file with write+non-latest-format and create: - * 3) 1 chunked dataset with version 2 B-tree chunk indexing type (without data) - * 4) 1 chunked dataset with extensible array indexing type (with data) - * 5) 1 compact and 1 contiguous datasets + * 3) 1 chunked dataset with version 2 B-tree chunk indexing type (without data) + * 4) 1 chunked dataset with extensible array indexing type (with data) + * 5) 1 compact and 1 contiguous datasets */ static void gen_non(const char *fname) { - hid_t fid = -1; /* file id */ - hid_t fcpl = -1; /* file creation property list */ - hid_t gid = -1; /* group id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did1 = -1, did2 = -1; /* dataset id */ - hsize_t dims1[1] = {10}; /* dataset dimension */ - hsize_t dims2[2] = {4, 6}; /* dataset dimension */ - hsize_t max_dims[2]; /* maximum dataset dimension */ - hsize_t c_dims[2] = {2, 3}; /* chunk dimension */ - int i; /* local index variable */ - int buf[24]; /* data buffer */ + hid_t fid = -1; /* file id */ + hid_t fcpl = -1; /* file creation property list */ + hid_t gid = -1; /* group id */ + hid_t sid = -1; /* space id */ + hid_t dcpl = -1; /* dataset creation property id */ + hid_t did1 = -1, did2 = -1; /* dataset id */ + hsize_t dims1[1] = {10}; /* dataset dimension */ + hsize_t dims2[2] = {4, 6}; /* dataset dimension */ + hsize_t max_dims[2]; /* maximum dataset dimension */ + hsize_t c_dims[2] = {2, 3}; /* chunk dimension */ + int i; /* local index variable */ + int buf[24]; /* data buffer */ if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) goto error; @@ -115,7 +115,7 @@ gen_non(const char *fname) if(H5Pset_chunk(dcpl, 2, c_dims) < 0) goto error; - /* + /* * Create a chunked dataset with extensible array chunk indexing type (without data) */ @@ -135,7 +135,7 @@ gen_non(const char *fname) if(H5Dclose(did1) < 0) goto error; - /* + /* * Create a chunked dataset with version 2 B-tree chunk indexing type (with data) */ @@ -226,7 +226,7 @@ gen_non(const char *fname) if(H5Dclose(did2) < 0) goto error; - /* + /* * Create a compact dataset in the group */ @@ -251,7 +251,7 @@ gen_non(const char *fname) if(H5Sclose(sid) < 0) goto error; - /* + /* * Create a contiguous dataset with (2d with data) in the file */ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) @@ -278,9 +278,9 @@ gen_non(const char *fname) goto error; if(H5Gclose(gid) < 0) - goto error; + goto error; if(H5Pclose(fcpl) < 0) - goto error; + goto error; if(H5Fclose(fid) < 0) goto error; @@ -298,24 +298,24 @@ error: } /* gen_non() */ /* - * Function: gen_edge() + * Function: gen_edge() * * Create a file with write+latest-format--this will result in v3 superblock+latest version support: - * A dataset: chunked, filtered, H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS enabled - * (i.e. the dataset does not filter partial edge chunks) + * A dataset: chunked, filtered, H5D_CHUNK_DONT_FILTER_PARTIAL_CHUNKS enabled + * (i.e. the dataset does not filter partial edge chunks) */ static void gen_edge(const char *fname) { - hid_t fid = -1; /* file id */ - hid_t fapl = -1; /* file access property list */ - hid_t sid = -1; /* dataspace id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did = -1; /* dataset id */ - hsize_t dims2[2] = {12, 6}; /* Dataset dimensions */ - hsize_t c_dims[2] = {5, 5}; /* Chunk dimensions */ - float buf[12][6]; /* Buffer for writing data */ - int i, j; /* local index variable */ + hid_t fid = -1; /* file id */ + hid_t fapl = -1; /* file access property list */ + hid_t sid = -1; /* dataspace id */ + hid_t dcpl = -1; /* dataset creation property id */ + hid_t did = -1; /* dataset id */ + hsize_t dims2[2] = {12, 6}; /* Dataset dimensions */ + hsize_t c_dims[2] = {5, 5}; /* Chunk dimensions */ + float buf[12][6]; /* Buffer for writing data */ + int i, j; /* local index variable */ /* Create a new format file */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) @@ -377,37 +377,37 @@ error: /* - * Function: gen_err_level() + * Function: gen_err_level() * * Generate a file to test the situtation described in HDFFV-9434: - * Exceed the limit of v1-btree level + * Exceed the limit of v1-btree level * - * Create a file with H5Pset_istore_k(fcpl, 1). - * Create a chunked dataset with extensible array chunk index and - * appends many chunks to the dataset. + * Create a file with H5Pset_istore_k(fcpl, 1). + * Create a chunked dataset with extensible array chunk index and + * appends many chunks to the dataset. * - * When h5format_convert tries to convert the dataset with - * extensive array index in the file to v1-btree chunk index, - * it will insert the dataset chunks to the v1-btree chunk index. - * The tree will split quickly due to the 'K' value of 1 and the - * tree level will eventually hit the maximum: 2^8(256). + * When h5format_convert tries to convert the dataset with + * extensive array index in the file to v1-btree chunk index, + * it will insert the dataset chunks to the v1-btree chunk index. + * The tree will split quickly due to the 'K' value of 1 and the + * tree level will eventually hit the maximum: 2^8(256). */ static void gen_err_level(const char *fname) { - hid_t fid = -1; /* file ID */ - hid_t fapl = -1; /* file access property list */ - hid_t fcpl = -1; /* file creation property list */ - hid_t sid = -1; /* dataspace id */ - hid_t dcpl = -1; /* dataset creation property list */ - hid_t did = -1; /* dataset ID */ - hid_t fsid = -1; /* file dataspace ID */ - hid_t msid = -1; /* memory dataspace ID */ - unsigned char *buf = NULL; /* buffer for data */ - hsize_t dims[2] = {0, 1}; /* dataset dimension sizes */ - hsize_t max_dims[2] = {1, H5S_UNLIMITED}; /* dataset maximum dimension sizes */ - hsize_t chunk_dims[2] = {1, 1}; /* chunk dimension sizes */ - int n = 0; /* local index variable */ + hid_t fid = -1; /* file ID */ + hid_t fapl = -1; /* file access property list */ + hid_t fcpl = -1; /* file creation property list */ + hid_t sid = -1; /* dataspace id */ + hid_t dcpl = -1; /* dataset creation property list */ + hid_t did = -1; /* dataset ID */ + hid_t fsid = -1; /* file dataspace ID */ + hid_t msid = -1; /* memory dataspace ID */ + unsigned char *buf = NULL; /* buffer for data */ + hsize_t dims[2] = {0, 1}; /* dataset dimension sizes */ + hsize_t max_dims[2] = {1, H5S_UNLIMITED}; /* dataset maximum dimension sizes */ + hsize_t chunk_dims[2] = {1, 1}; /* chunk dimension sizes */ + int n = 0; /* local index variable */ /* Create a new format file */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) @@ -440,6 +440,8 @@ gen_err_level(const char *fname) goto error; /* Closing */ + if(H5Pclose(fcpl) < 0) + goto error; if(H5Pclose(dcpl) < 0) goto error; if(H5Sclose(sid) < 0) @@ -459,50 +461,51 @@ gen_err_level(const char *fname) /* Loop through appending 1 element at a time */ for(n = 0; n < NUM; n++) { - hsize_t start[2] = {0, 0}; - hsize_t count[2] = {1, 1}; - hsize_t extent[2] = {0, 0}; - - start[0] = 0; - start[1] = (hsize_t)n; - extent[0] = 1; - extent[1] = (hsize_t)(n + 1); - - /* Set current dimension sizes for the dataset */ - if(H5Dset_extent(did, extent) < 0) - goto error; - - /* Set up memory dataspace */ - if((msid = H5Screate_simple(2, count, NULL)) < 0) - goto error; - - /* Get file dataspace */ - if((fsid = H5Dget_space(did)) < 0) - goto error; - - if((H5Sselect_hyperslab(fsid, H5S_SELECT_SET, start, NULL, count, NULL)) < 0) - goto error; - - /* Write to the dataset */ - if(H5Dwrite(did, H5T_NATIVE_UCHAR, msid, fsid, H5P_DEFAULT, buf) < 0) - goto error; - - if(H5Sclose(fsid) < 0) - goto error; - if(H5Sclose(msid) < 0) - goto error; + hsize_t start[2] = {0, 0}; + hsize_t count[2] = {1, 1}; + hsize_t extent[2] = {0, 0}; + + start[0] = 0; + start[1] = (hsize_t)n; + extent[0] = 1; + extent[1] = (hsize_t)(n + 1); + + /* Set current dimension sizes for the dataset */ + if(H5Dset_extent(did, extent) < 0) + goto error; + + /* Set up memory dataspace */ + if((msid = H5Screate_simple(2, count, NULL)) < 0) + goto error; + + /* Get file dataspace */ + if((fsid = H5Dget_space(did)) < 0) + goto error; + + if((H5Sselect_hyperslab(fsid, H5S_SELECT_SET, start, NULL, count, NULL)) < 0) + goto error; + + /* Write to the dataset */ + if(H5Dwrite(did, H5T_NATIVE_UCHAR, msid, fsid, H5P_DEFAULT, buf) < 0) + goto error; + + if(H5Sclose(fsid) < 0) + goto error; + if(H5Sclose(msid) < 0) + goto error; } /* Closing */ if(H5Dclose(did) < 0) - goto error; + goto error; if(H5Fclose(fid) < 0) - goto error; + goto error; if(H5Pclose(fapl) < 0) - goto error; - if(buf) free(buf); + goto error; error: + if(buf) + free(buf); H5E_BEGIN_TRY { H5Pclose(dcpl); H5Sclose(sid); @@ -517,33 +520,33 @@ error: } /* gen_err_level() */ /* - * Function: gen_ext() + * Function: gen_ext() * * Create a file with/without latest format with: - * 1) 1 contiguous dataset (without data) - * 2) 2 chunked datasets with extensible array chunk indexing type (with/without data) - * 3) 2 chunked datasets with version 2 B-tree chunk indexing type (with/without data) - * 4) 2 chunked datasets with fixed array chunk indexing type (with/without data) - * 5) 2 chunked datasets with implicit array chunk indexing type (with/without data) + * 1) 1 contiguous dataset (without data) + * 2) 2 chunked datasets with extensible array chunk indexing type (with/without data) + * 3) 2 chunked datasets with version 2 B-tree chunk indexing type (with/without data) + * 4) 2 chunked datasets with fixed array chunk indexing type (with/without data) + * 5) 2 chunked datasets with implicit array chunk indexing type (with/without data) * It will create the file with/without messages in the superblock extension depending * on the parameter "what". */ static void gen_ext(const char *fname, unsigned new_format, unsigned what) { - hid_t fid = -1; /* file id */ - hid_t fapl = -1; /* file access property list */ - hid_t fcpl = -1; /* file creation property list */ - hid_t gid = -1; /* group id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did1 = -1, did2 = -1; /* dataset id */ - hsize_t dims1[1] = {10}; /* dataset dimension */ - hsize_t dims2[2] = {4, 6}; /* dataset dimension */ - hsize_t max_dims[2]; /* maximum dataset dimension */ - hsize_t c_dims[2] = {2, 3}; /* chunk dimension */ - int i; /* local index variable */ - int buf[24]; /* data buffer */ + hid_t fid = -1; /* file id */ + hid_t fapl = -1; /* file access property list */ + hid_t fcpl = -1; /* file creation property list */ + hid_t gid = -1; /* group id */ + hid_t sid = -1; /* space id */ + hid_t dcpl = -1; /* dataset creation property id */ + hid_t did1 = -1, did2 = -1; /* dataset id */ + hsize_t dims1[1] = {10}; /* dataset dimension */ + hsize_t dims2[2] = {4, 6}; /* dataset dimension */ + hsize_t max_dims[2]; /* maximum dataset dimension */ + hsize_t c_dims[2] = {2, 3}; /* chunk dimension */ + int i; /* local index variable */ + int buf[24]; /* data buffer */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) goto error; @@ -559,34 +562,34 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) /* Generate messages that might be placed in superblock extension */ switch(what) { - case 0: - H5Pset_istore_k(fcpl, ISTORE_IK); - break; - case 1: - H5Pset_shared_mesg_nindexes(fcpl, 4); - break; - case 2: - H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, FALSE, (hsize_t)1); - break; - case 3: - H5Pset_istore_k(fcpl, ISTORE_IK); - H5Pset_shared_mesg_nindexes(fcpl, 4); - break; - case 4: - H5Pset_istore_k(fcpl, ISTORE_IK); - H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_FSM_AGGR, TRUE, (hsize_t)1); - break; - case 5: - H5Pset_shared_mesg_nindexes(fcpl, 4); - H5Pset_file_space_page_size(fcpl, (hsize_t)512); - break; - case 6: - H5Pset_istore_k(fcpl, ISTORE_IK); - H5Pset_shared_mesg_nindexes(fcpl, 4); - H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_NONE, FALSE, (hsize_t)1); - break; - default: - break; + case 0: + H5Pset_istore_k(fcpl, ISTORE_IK); + break; + case 1: + H5Pset_shared_mesg_nindexes(fcpl, 4); + break; + case 2: + H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_PAGE, FALSE, (hsize_t)1); + break; + case 3: + H5Pset_istore_k(fcpl, ISTORE_IK); + H5Pset_shared_mesg_nindexes(fcpl, 4); + break; + case 4: + H5Pset_istore_k(fcpl, ISTORE_IK); + H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_FSM_AGGR, TRUE, (hsize_t)1); + break; + case 5: + H5Pset_shared_mesg_nindexes(fcpl, 4); + H5Pset_file_space_page_size(fcpl, (hsize_t)512); + break; + case 6: + H5Pset_istore_k(fcpl, ISTORE_IK); + H5Pset_shared_mesg_nindexes(fcpl, 4); + H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_NONE, FALSE, (hsize_t)1); + break; + default: + break; } /* Create the file */ @@ -604,8 +607,8 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) goto error; - /* - * Create a contiguous dataset + /* + * Create a contiguous dataset */ /* Create dataspace */ @@ -622,8 +625,8 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) if(H5Dclose(did1) < 0) goto error; - /* - * Create 2 chunked datasets with extensible array chunk indexing type + /* + * Create 2 chunked datasets with extensible array chunk indexing type * (one with data; one without data) */ @@ -657,8 +660,8 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) goto error; - /* - * Create 2 chunked datasets with version 2 B-tree chunk indexing type + /* + * Create 2 chunked datasets with version 2 B-tree chunk indexing type * (one with data; one without data) */ @@ -689,7 +692,7 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) goto error; /* - * Create 2 chunked datasets with fixed array chunk indexing type + * Create 2 chunked datasets with fixed array chunk indexing type * (one with data; one without data) */ @@ -719,8 +722,8 @@ gen_ext(const char *fname, unsigned new_format, unsigned what) goto error; - /* - * Create 2 chunked datasets with implicit chunk indexing type + /* + * Create 2 chunked datasets with implicit chunk indexing type * (one with data; one without data) */ diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl b/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl new file mode 100644 index 0000000..bc0229c --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file-d.ddl @@ -0,0 +1,25 @@ +usage: h5format_convert [OPTIONS] file_name + OPTIONS + -h, --help Print a usage message and exit + -V, --version Print version number and exit + -v, --verbose Turn on verbose mode + -d dname, --dname=dataset_name Pathname for the dataset + -n, --noop Perform all the steps except the actual conversion + +Examples of use: + +h5format_convert -d /group/dataset file_name + Convert the dataset </group/dataset> in the HDF5 file <file_name>: + a. chunked dataset: convert the chunk indexing type to version 1 B-tree + b. compact/contiguous dataset: downgrade the layout version to 3 + c. virtual dataset: no action + +h5format_convert file_name + Convert all datasets in the HDF5 file <file_name>: + a. chunked dataset: convert the chunk indexing type to version 1 B-tree + b. compact/contiguous dataset: downgrade the layout version to 3 + c. virtual dataset: no action + +h5format_convert -n -d /group/dataset file_name + Go through all the steps except the actual conversion when + converting the dataset </group/dataset> in the HDF5 file <file_name>. diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl index 38fc432..bc0229c 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl @@ -23,4 +23,3 @@ h5format_convert file_name h5format_convert -n -d /group/dataset file_name Go through all the steps except the actual conversion when converting the dataset </group/dataset> in the HDF5 file <file_name>. -h5format_convert error: missing file name diff --git a/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err new file mode 100644 index 0000000..ceb0fe4 --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_d_file.ddl.err @@ -0,0 +1 @@ +h5format_convert error: missing file name diff --git a/tools/test/h5format_convert/testfiles/h5fc_dname.ddl b/tools/test/h5format_convert/testfiles/h5fc_dname.ddl index 48564b7..bc0229c 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_dname.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_dname.ddl @@ -23,4 +23,3 @@ h5format_convert file_name h5format_convert -n -d /group/dataset file_name Go through all the steps except the actual conversion when converting the dataset </group/dataset> in the HDF5 file <file_name>. -h5format_convert error: No dataset name diff --git a/tools/test/h5format_convert/testfiles/h5fc_dname.err b/tools/test/h5format_convert/testfiles/h5fc_dname.err new file mode 100644 index 0000000..361d8a9 --- /dev/null +++ b/tools/test/h5format_convert/testfiles/h5fc_dname.err @@ -0,0 +1 @@ +h5format_convert error: No dataset name diff --git a/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl b/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl.err index 39450c0..39450c0 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_nonexistdset_file.ddl.err diff --git a/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl b/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl.err index 706ea9d..706ea9d 100644 --- a/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl +++ b/tools/test/h5format_convert/testfiles/h5fc_nonexistfile.ddl.err diff --git a/tools/test/h5format_convert/testh5fc.sh.in b/tools/test/h5format_convert/testh5fc.sh.in index 585d389..2cdd445 100644 --- a/tools/test/h5format_convert/testh5fc.sh.in +++ b/tools/test/h5format_convert/testh5fc.sh.in @@ -103,13 +103,18 @@ $SRC_H5FORMCONV_TESTFILES/old_h5fc_ext3_isf.h5 $SRC_H5FORMCONV_TESTFILES/h5fc_err_level.h5 " +LIST_ERR_TEST_FILES=" +$SRC_H5FORMCONV_TESTFILES/h5fc_d_file.ddl.err +$SRC_H5FORMCONV_TESTFILES/h5fc_dname.err +$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistfile.ddl.err +$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistdset_file.ddl.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5FORMCONV_TESTFILES/h5fc_help.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_nooption.ddl -$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistfile.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_d_file.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_dname.ddl -$SRC_H5FORMCONV_TESTFILES/h5fc_nonexistdset_file.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_non_chunked.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_bt1.ddl $SRC_H5FORMCONV_TESTFILES/h5fc_v_ndata_bt1.ddl @@ -137,7 +142,7 @@ $SRC_H5FORMCONV_TESTFILES/h5fc_v_err.ddl.err # # copy test files and expected output files from source dirs to test dir # -COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES" +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_ERR_TEST_FILES $LIST_OTHER_TEST_FILES" COPY_TESTFILES_TO_TESTDIR() { @@ -193,6 +198,9 @@ TESTING() { echo "Testing $* $SPACES" | cut -c1-80 | tr -d '\012' } +# Source in the output filter function definitions. +. $srcdir/../../../bin/output_filter.sh + # Run a test and print PASS or *FAIL*. If a test fails then increment # the `nerrors' global variable and (if $verbose is set) display the # difference between the actual output and the expected output. The @@ -212,8 +220,9 @@ TESTING() { TOOLTEST_OUT() { # Prepare expected and actual output expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ddl`.err" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -233,7 +242,6 @@ TOOLTEST_OUT() { ) >$actual 2>$actual_err cp $actual $actual_sav cp $actual_err $actual_err_sav - cat $actual_err >> $actual # Compare output COMPARE_OUT $expect $actual @@ -251,7 +259,7 @@ TOOLTEST_MASK_OUT() { expect_err="$TESTDIR/$1.err" actual_ext="$TESTDIR/$1.ext" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -305,6 +313,42 @@ TOOLTEST_MASK_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } +# Same as TOOLTEST_OUT except only compares error outout +TOOLTEST_ERR() { + # Prepare expected and actual output + expect="$TESTDIR/$1" + expect_err="$TESTDIR/$1.err" + actual="$TESTDIR/`basename $1 .ddl`.out" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + + # Prepare the test file + $RM $TESTDIR/$TMPOUTFILE + TFILE=$2 + if [ ! -z "$2" ] && [ -e $TESTDIR/$2 ] ; then + $CP $TESTDIR/$2 $TESTDIR/$TMPOUTFILE + TFILE=$TMPOUTFILE + fi + + # Run test. + TESTING $FORMCONV $3 $4 $5 $6 $2 + ( + cd $TESTDIR + $RUNSERIAL $FORMCONV_BIN $3 $4 $5 $6 $TFILE + ) >$actual 2>$actual_err + cp $actual $actual_sav + cp $actual_err $actual_err_sav + + # Compare output + COMPARE_OUT $expect_err $actual_err + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + $RM $actual $actual_err + $RM $actual $actual_err $actual_sav $actual_err_sav + fi +} # To check that the tool exits success, no output # Assume all short options @@ -406,7 +450,7 @@ COPY_TESTFILES_TO_TESTDIR # h5format_convert nonexist.h5 (no options, file does not exist) TOOLTEST_OUT h5fc_help.ddl '' --help TOOLTEST_OUT h5fc_nooption.ddl '' -TOOLTEST_OUT h5fc_nonexistfile.ddl nonexist.h5 +TOOLTEST_ERR h5fc_nonexistfile.ddl nonexist.h5 # # # h5format_convert -d old_h5fc_ext_none.h5 (just -d option, file exists) @@ -416,7 +460,7 @@ TOOLTEST_OUT h5fc_nonexistfile.ddl nonexist.h5 TOOLTEST_OUT h5fc_d_file.ddl old_h5fc_ext_none.h5 -d TOOLTEST_OUT h5fc_d_file.ddl old_h5fc_ext_none.h5 --dname TOOLTEST_OUT h5fc_dname.ddl '' --dname -TOOLTEST_OUT h5fc_nonexistdset_file.ddl old_h5fc_ext_none.h5 --dname=nonexist +TOOLTEST_ERR h5fc_nonexistdset_file.ddl old_h5fc_ext_none.h5 --dname=nonexist # # # diff --git a/tools/test/h5import/Makefile.in b/tools/test/h5import/Makefile.in index 2d9e25a..7e41e7f 100644 --- a/tools/test/h5import/Makefile.in +++ b/tools/test/h5import/Makefile.in @@ -551,7 +551,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -585,6 +584,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1419,7 +1419,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5jam/CMakeTests.cmake b/tools/test/h5jam/CMakeTests.cmake index 66ff715..2d00b86 100644 --- a/tools/test/h5jam/CMakeTests.cmake +++ b/tools/test/h5jam/CMakeTests.cmake @@ -74,6 +74,8 @@ -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" -D "TEST_OUTPUT=${expectfile}.out" -D "TEST_EXPECT=${resultcode}" + -D "TEST_ERRREF=testfiles/${expectfile}.txt" + -D "TEST_SKIP_COMPARE=1" -D "TEST_REFERENCE=testfiles/${expectfile}.txt" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) diff --git a/tools/test/h5jam/Makefile.in b/tools/test/h5jam/Makefile.in index 1163c07..1517f52 100644 --- a/tools/test/h5jam/Makefile.in +++ b/tools/test/h5jam/Makefile.in @@ -556,7 +556,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -590,6 +589,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1428,7 +1428,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5jam/getub.c b/tools/test/h5jam/getub.c index 7cfde36..26a427d 100644 --- a/tools/test/h5jam/getub.c +++ b/tools/test/h5jam/getub.c @@ -148,7 +148,7 @@ main(int argc, const char *argv[]) error: if(buf) HDfree(buf); - if(fd > -1) + if(fd >= 0) HDclose(fd); return EXIT_FAILURE; } /* end main() */ diff --git a/tools/test/h5jam/tellub.c b/tools/test/h5jam/tellub.c index 8e4b3ac..ea362f5 100644 --- a/tools/test/h5jam/tellub.c +++ b/tools/test/h5jam/tellub.c @@ -26,9 +26,9 @@ */ static const char *s_opts = "h"; static struct long_options l_opts[] = { - {"help", no_arg, 'h'}, - {"hel", no_arg, 'h'}, - {NULL, 0, '\0'} + {"help", no_arg, 'h'}, + {"hel", no_arg, 'h'}, + {NULL, 0, '\0'} }; /*------------------------------------------------------------------------- @@ -37,152 +37,126 @@ static struct long_options l_opts[] = { * Purpose: Print the usage message * * Return: void - * - * Programmer: - * - * Modifications: - * *------------------------------------------------------------------------- */ static void usage (const char *prog) { - fflush (stdout); - fprintf (stdout, "usage: %s h5_file\n", prog); - fprintf (stdout, - " Check that h5_fil is HDF5 file and print size of user block \n"); - fprintf (stdout, " %s -h\n", prog); - fprintf (stdout, " Print a usage message and exit\n"); -} + HDfflush(stdout); + HDfprintf(stdout, "usage: %s h5_file\n", prog); + HDfprintf(stdout, + " Check that h5_fil is HDF5 file and print size of user block \n"); + HDfprintf(stdout, " %s -h\n", prog); + HDfprintf(stdout, " Print a usage message and exit\n"); +} /* end usage() */ /*------------------------------------------------------------------------- * Function: parse_command_line * - * Purpose: Parse the command line for the h5dumper. - * - * Return: Success: + * Purpose: Parse the command line. * + * Return: Success: void * Failure: Exits program with EXIT_FAILURE value. - * - * Programmer: - * - * Modifications: - * *------------------------------------------------------------------------- */ static void parse_command_line (int argc, const char *argv[]) { - int opt; - - /* parse command line options */ - while ((opt = get_option (argc, argv, s_opts, l_opts)) != EOF) - { - switch ((char) opt) - { - case 'h': - usage (h5tools_getprogname()); - exit (EXIT_SUCCESS); - case '?': - default: - usage (h5tools_getprogname()); - exit (EXIT_FAILURE); - } + int opt; + + /* parse command line options */ + while ((opt = get_option (argc, argv, s_opts, l_opts)) != EOF) { + switch ((char) opt) { + case 'h': + usage (h5tools_getprogname()); + HDexit(EXIT_SUCCESS); + case '?': + default: + usage (h5tools_getprogname()); + HDexit(EXIT_FAILURE); + } } - /* check for file name to be processed */ - if (argc <= opt_ind) - { - error_msg("missing file name\n"); - usage (h5tools_getprogname()); - exit (EXIT_FAILURE); + /* check for file name to be processed */ + if (argc <= opt_ind) { + error_msg("missing file name\n"); + usage (h5tools_getprogname()); + HDexit(EXIT_FAILURE); } -} +} /* end parse_command_line() */ /*------------------------------------------------------------------------- * Function: main * - * Purpose: HDF5 user block unjammer - * - * Return: Success: 0 - * Failure: 1 - * - * Programmer: - * - * Modifications: + * Purpose: HDF5 user block tell size * + * Return: EXIT_SUCCESS/EXIT_FAILURE *------------------------------------------------------------------------- */ int main (int argc, const char *argv[]) { - char *ifname; - void *edata; - H5E_auto2_t func; - hid_t ifile; - hsize_t usize; - htri_t testval; - herr_t status; - hid_t plist; - - h5tools_setprogname(PROGRAMNAME); - h5tools_setstatus(EXIT_SUCCESS); - - /* Initialize h5tools lib */ - h5tools_init(); - - /* Disable error reporting */ - H5Eget_auto2(H5E_DEFAULT, &func, &edata); - H5Eset_auto2(H5E_DEFAULT, NULL, NULL); - - parse_command_line (argc, argv); - - if (argc <= (opt_ind)) - { - error_msg("missing file name\n"); - usage (h5tools_getprogname()); - return (EXIT_FAILURE); + char *ifname; + void *edata; + H5E_auto2_t func; + hid_t ifile; + hsize_t usize; + htri_t testval; + herr_t status; + hid_t plist = H5I_INVALID_HID; + + h5tools_setprogname(PROGRAMNAME); + h5tools_setstatus(EXIT_SUCCESS); + + /* Initialize h5tools lib */ + h5tools_init(); + + /* Disable error reporting */ + H5Eget_auto2(H5E_DEFAULT, &func, &edata); + H5Eset_auto2(H5E_DEFAULT, NULL, NULL); + + parse_command_line(argc, argv); + + if(argc <= (opt_ind)) { + error_msg("missing file name\n"); + usage (h5tools_getprogname()); + return EXIT_FAILURE; } - ifname = HDstrdup (argv[opt_ind]); + ifname = HDstrdup(argv[opt_ind]); testval = H5Fis_hdf5 (ifname); - if (testval <= 0) - { - error_msg("Input HDF5 file is not HDF \"%s\"\n", ifname); - return (EXIT_FAILURE); + if(testval <= 0) { + error_msg("Input HDF5 file is not HDF \"%s\"\n", ifname); + return EXIT_FAILURE; } - ifile = H5Fopen (ifname, H5F_ACC_RDONLY, H5P_DEFAULT); + ifile = H5Fopen(ifname, H5F_ACC_RDONLY, H5P_DEFAULT); - if (ifile < 0) - { - error_msg("Can't open input HDF5 file \"%s\"\n", ifname); - return (EXIT_FAILURE); + if(ifile < 0) { + error_msg("Can't open input HDF5 file \"%s\"\n", ifname); + return EXIT_FAILURE; } - plist = H5Fget_create_plist (ifile); - if (plist < 0) - { - error_msg("Can't get file creation plist for file \"%s\"\n", - ifname); - return (EXIT_FAILURE); + plist = H5Fget_create_plist(ifile); + if(plist < 0) { + error_msg("Can't get file creation plist for file \"%s\"\n", ifname); + return EXIT_FAILURE; } - status = H5Pget_userblock (plist, &usize); - if (status < 0) - { - error_msg("Can't get user block for file \"%s\"\n", ifname); - return (EXIT_FAILURE); + status = H5Pget_userblock(plist, &usize); + if(status < 0) { + error_msg("Can't get user block for file \"%s\"\n", ifname); + return EXIT_FAILURE; } - printf ("%ld\n", (long) usize); + HDprintf("%ld\n", (long) usize); - H5Pclose (plist); - H5Fclose (ifile); + H5Pclose (plist); + H5Fclose (ifile); - return (EXIT_SUCCESS); -} + return EXIT_SUCCESS; +} /* end main() */ diff --git a/tools/test/h5ls/CMakeLists.txt b/tools/test/h5ls/CMakeLists.txt index 5b8cbe0..dc5804c 100644 --- a/tools/test/h5ls/CMakeLists.txt +++ b/tools/test/h5ls/CMakeLists.txt @@ -4,29 +4,31 @@ project (HDF5_TOOLS_TEST_H5LS C) #----------------------------------------------------------------------------- # If plugin library tests can be tested #----------------------------------------------------------------------------- -set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibls") -set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") -set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) +if (BUILD_SHARED_LIBS) + set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibls") + set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") + set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) -add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_ls.c) -target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") -TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) -target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) -H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") + add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_ls.c) + target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) + target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) + H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") -# make plugins dir -file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") -#----------------------------------------------------------------------------- -# Copy plugin library to a plugins folder -#----------------------------------------------------------------------------- -add_custom_command ( - TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different - "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" - "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" -) + # make plugins dir + file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") + #----------------------------------------------------------------------------- + # Copy plugin library to a plugins folder + #----------------------------------------------------------------------------- + add_custom_command ( + TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} + POST_BUILD + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different + "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + ) +endif () include (CMakeTests.cmake) diff --git a/tools/test/h5ls/CMakeTests.cmake b/tools/test/h5ls/CMakeTests.cmake index d03a344..116d097 100644 --- a/tools/test/h5ls/CMakeTests.cmake +++ b/tools/test/h5ls/CMakeTests.cmake @@ -47,6 +47,12 @@ ${HDF5_TOOLS_DIR}/testfiles/tdset_idx.h5 ) + set (LIST_ERR_TEST_FILES + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/nosuchfile.err + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/textlinksrc-nodangle-1.err + ${HDF5_TOOLS_DIR}/test/h5ls/errfiles/tgroup-1.err + ) + set (LIST_OTHER_TEST_FILES ${HDF5_TOOLS_DIR}/testfiles/help-1.ls ${HDF5_TOOLS_DIR}/testfiles/help-2.ls @@ -116,6 +122,10 @@ get_filename_component(fname "${listfiles}" NAME) HDFTEST_COPY_FILE("${listfiles}" "${PROJECT_BINARY_DIR}/testfiles/${fname}" "h5ls_files") endforeach () + foreach (listfiles ${LIST_ERR_TEST_FILES}) + get_filename_component(fname "${listfiles}" NAME) + HDFTEST_COPY_FILE("${listfiles}" "${PROJECT_BINARY_DIR}/testfiles/${fname}" "h5ls_files") + endforeach () add_custom_target(h5ls_files ALL COMMENT "Copying files needed by h5ls tests" DEPENDS ${h5ls_files_list}) ############################################################################## @@ -159,6 +169,42 @@ endif () endmacro () + macro (ADD_H5_ERR_TEST resultfile resultcode) + # If using memchecker add tests without using scripts + if (HDF5_ENABLE_USING_MEMCHECKER) + add_test (NAME H5LS-${resultfile} COMMAND $<TARGET_FILE:h5ls> ${ARGN}) + set_tests_properties (H5LS-${resultfile} PROPERTIES WORKING_DIRECTORY "${PROJECT_BINARY_DIR}/testfiles") + if ("${resultcode}" STREQUAL "1") + set_tests_properties (H5LS-${resultfile} PROPERTIES WILL_FAIL "true") + endif () + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5LS-${resultfile} PROPERTIES DEPENDS ${last_test}) + endif () + else () + # Remove any output file left over from previous test run + add_test ( + NAME H5LS-${resultfile}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${resultfile}.out + testfiles/${resultfile}.out.err + ) + add_test ( + NAME H5LS-${resultfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5ls>" + -D "TEST_ARGS=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${resultfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.ls" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5LS-${resultfile} PROPERTIES DEPENDS H5LS-${resultfile}-clear-objects) + endif () + endmacro () + macro (ADD_H5_UD_TEST testname resultcode resultfile) if (NOT HDF5_ENABLE_USING_MEMCHECKER) # Remove any output file left over from previous test run @@ -341,7 +387,7 @@ # test for displaying groups # The following combination of arguments is expected to return an error message # and return value 1 - ADD_H5_TEST (tgroup-1 1 -w80 -r -g tgroup.h5) + ADD_H5_ERR_TEST (tgroup-1 1 -w80 -r -g tgroup.h5) ADD_H5_TEST (tgroup-2 0 -w80 -g tgroup.h5/g1) # test for files with groups that have long comments @@ -382,7 +428,7 @@ # tests for no-dangling-links # if this option is given on dangling link, h5ls should return exit code 1 # when used alone , expect to print out help and return exit code 1 - ADD_H5_TEST (textlinksrc-nodangle-1 1 -w80 --no-dangling-links textlinksrc.h5) + ADD_H5_ERR_TEST (textlinksrc-nodangle-1 1 -w80 --no-dangling-links textlinksrc.h5) # external dangling link - expected exit code 1 ADD_H5_TEST (textlinksrc-nodangle-2 1 -w80 --follow-symlinks --no-dangling-links textlinksrc.h5) # soft dangling link - expected exit code 1 @@ -444,7 +490,7 @@ endif () # test for non-existing file - ADD_H5_TEST (nosuchfile 1 nosuchfile.h5) + ADD_H5_ERR_TEST (nosuchfile 1 nosuchfile.h5) # test for variable length data types in verbose mode if (H5_WORDS_BIGENDIAN) @@ -470,4 +516,6 @@ ############################################################################## ### P L U G I N T E S T S ############################################################################## -ADD_H5_UD_TEST (h5ls_plugin_test 0 tudfilter -w80 -d tudfilter.h5) +if (BUILD_SHARED_LIBS) + ADD_H5_UD_TEST (h5ls_plugin_test 0 tudfilter -w80 -d tudfilter.h5) +endif () diff --git a/tools/test/h5ls/Makefile.in b/tools/test/h5ls/Makefile.in index eaa12ec..faa88ce 100644 --- a/tools/test/h5ls/Makefile.in +++ b/tools/test/h5ls/Makefile.in @@ -557,7 +557,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -591,6 +590,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1428,7 +1428,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5ls/errfiles/nosuchfile.err b/tools/test/h5ls/errfiles/nosuchfile.err new file mode 100644 index 0000000..8c4ee42 --- /dev/null +++ b/tools/test/h5ls/errfiles/nosuchfile.err @@ -0,0 +1 @@ +nosuchfile.h5: unable to open file diff --git a/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err b/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err new file mode 100644 index 0000000..8991fc1 --- /dev/null +++ b/tools/test/h5ls/errfiles/textlinksrc-nodangle-1.err @@ -0,0 +1,2 @@ +Error: --no-dangling-links must be used along with --follow-symlinks option! + diff --git a/tools/test/h5ls/errfiles/tgroup-1.err b/tools/test/h5ls/errfiles/tgroup-1.err new file mode 100644 index 0000000..ba4cf07 --- /dev/null +++ b/tools/test/h5ls/errfiles/tgroup-1.err @@ -0,0 +1,2 @@ +Error: 'recursive' option not compatible with 'group info' option! + diff --git a/tools/test/h5ls/testh5ls.sh.in b/tools/test/h5ls/testh5ls.sh.in index 8c6551b..353f1bb 100644 --- a/tools/test/h5ls/testh5ls.sh.in +++ b/tools/test/h5ls/testh5ls.sh.in @@ -53,6 +53,7 @@ SRC_H5REPACK_TESTFILES="$SRC_TOOLS/test/h5repack/testfiles" SRC_H5JAM_TESTFILES="$SRC_TOOLS/test/h5jam/testfiles" SRC_H5STAT_TESTFILES="$SRC_TOOLS/test/h5stat/testfiles" SRC_H5IMPORT_TESTFILES="$SRC_TOOLS/test/h5import/testfiles" +SRC_H5LS_ERRFILES="$SRC_TOOLS/test/h5ls/errfiles" TESTDIR=./testfiles test -d $TESTDIR || mkdir $TESTDIR @@ -93,6 +94,12 @@ $SRC_H5LS_TESTFILES/tvldtypes1.h5 $SRC_H5LS_TESTFILES/tdset_idx.h5 " +LIST_ERROR_TEST_FILES=" +$SRC_H5LS_ERRFILES/nosuchfile.err +$SRC_H5LS_ERRFILES/textlinksrc-nodangle-1.err +$SRC_H5LS_ERRFILES/tgroup-1.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5LS_TESTFILES/help-1.ls $SRC_H5LS_TESTFILES/help-2.ls @@ -228,8 +235,9 @@ TESTING() { # $2 and on -- argument for the h5ls tool TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ls`.err" actual="$TESTDIR/`basename $1 .ls`.out" - actual_err="$TESTDIR/`basename $1 .ls`.err" + actual_err="$TESTDIR/`basename $1 .ls`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -251,7 +259,6 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ $h5haveexitcode = 'yes' -a $exitcode -ne $retvalexpect ]; then echo "*FAILED*" nerrors="`expr $nerrors + 1`" diff --git a/tools/test/h5repack/CMakeLists.txt b/tools/test/h5repack/CMakeLists.txt index 2a168e9..890d5d2 100644 --- a/tools/test/h5repack/CMakeLists.txt +++ b/tools/test/h5repack/CMakeLists.txt @@ -32,45 +32,47 @@ set_target_properties (h5repacktest PROPERTIES FOLDER tools) #----------------------------------------------------------------------------- # If plugin library tests can be tested #----------------------------------------------------------------------------- -set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibadd") -set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") -set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) -set (HDF5_TOOL_PLUGIN_LIB_VCORENAME "dynlibvers") -set (HDF5_TOOL_PLUGIN_LIB_VNAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_VCORENAME}") -set (HDF5_TOOL_PLUGIN_LIB_VTARGET ${HDF5_TOOL_PLUGIN_LIB_VCORENAME}) +if (BUILD_SHARED_LIBS) + set (HDF5_TOOL_PLUGIN_LIB_CORENAME "dynlibadd") + set (HDF5_TOOL_PLUGIN_LIB_NAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_CORENAME}") + set (HDF5_TOOL_PLUGIN_LIB_TARGET ${HDF5_TOOL_PLUGIN_LIB_CORENAME}) + set (HDF5_TOOL_PLUGIN_LIB_VCORENAME "dynlibvers") + set (HDF5_TOOL_PLUGIN_LIB_VNAME "${HDF5_EXTERNAL_LIB_PREFIX}${HDF5_TOOL_PLUGIN_LIB_VCORENAME}") + set (HDF5_TOOL_PLUGIN_LIB_VTARGET ${HDF5_TOOL_PLUGIN_LIB_VCORENAME}) -add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c) -target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") -TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) -target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) -H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") + add_library (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED dynlib_rpk.c) + target_include_directories(${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_TARGET} SHARED) + target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_TARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) + H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_TARGET} ${HDF5_TOOL_PLUGIN_LIB_NAME} SHARED "LIB") -add_library (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED dynlib_vrpk.c) -target_include_directories(${HDF5_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") -TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED) -target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_VTARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) -H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_VTARGET} ${HDF5_TOOL_PLUGIN_LIB_VNAME} SHARED "LIB") + add_library (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED dynlib_vrpk.c) + target_include_directories(${HDF5_TOOL_PLUGIN_LIB_VTARGET} PRIVATE "${HDF5_SRC_DIR};${HDF5_BINARY_DIR};$<$<BOOL:${HDF5_ENABLE_PARALLEL}>:${MPI_C_INCLUDE_DIRS}>") + TARGET_C_PROPERTIES (${HDF5_TOOL_PLUGIN_LIB_VTARGET} SHARED) + target_link_libraries (${HDF5_TOOL_PLUGIN_LIB_VTARGET} PRIVATE ${HDF5_TEST_LIB_TARGET}) + H5_SET_LIB_OPTIONS (${HDF5_TOOL_PLUGIN_LIB_VTARGET} ${HDF5_TOOL_PLUGIN_LIB_VNAME} SHARED "LIB") -# make plugins dir -file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") -#----------------------------------------------------------------------------- -# Copy plugin library to a plugins folder -#----------------------------------------------------------------------------- -add_custom_command ( - TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different - "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" - "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" -) -add_custom_command ( - TARGET ${HDF5_TOOL_PLUGIN_LIB_VTARGET} - POST_BUILD - COMMAND ${CMAKE_COMMAND} - ARGS -E copy_if_different - "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>" - "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>" -) + # make plugins dir + file (MAKE_DIRECTORY "${CMAKE_BINARY_DIR}/plugins") + #----------------------------------------------------------------------------- + # Copy plugin library to a plugins folder + #----------------------------------------------------------------------------- + add_custom_command ( + TARGET ${HDF5_TOOL_PLUGIN_LIB_TARGET} + POST_BUILD + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different + "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_TARGET}>" + ) + add_custom_command ( + TARGET ${HDF5_TOOL_PLUGIN_LIB_VTARGET} + POST_BUILD + COMMAND ${CMAKE_COMMAND} + ARGS -E copy_if_different + "$<TARGET_FILE:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>" + "${CMAKE_BINARY_DIR}/plugins/$<TARGET_FILE_NAME:${HDF5_TOOL_PLUGIN_LIB_VTARGET}>" + ) +endif () include (CMakeTests.cmake) diff --git a/tools/test/h5repack/CMakeTests.cmake b/tools/test/h5repack/CMakeTests.cmake index a063e19..c2a2be7 100644 --- a/tools/test/h5repack/CMakeTests.cmake +++ b/tools/test/h5repack/CMakeTests.cmake @@ -16,39 +16,6 @@ ############################################################################## ############################################################################## - if (HDF5_TEST_VFD) - set (VFD_LIST - sec2 - stdio - core - split - multi - family - ) - - if (DIRECT_VFD) - set (VFD_LIST ${VFD_LIST} direct) - endif () - - macro (ADD_VFD_TEST vfdname resultcode) - add_test ( - NAME H5REPACK-VFD-${vfdname}-h5repacktest - COMMAND "${CMAKE_COMMAND}" - -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>" - -D "TEST_ARGS:STRING=" - -D "TEST_VFD:STRING=${vfdname}" - -D "TEST_EXPECT=${resultcode}" - -D "TEST_OUTPUT=h5repacktest" - -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" - -P "${HDF_RESOURCES_DIR}/vfdTest.cmake" - ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "H5REPACK-VFD-${vfdname}-h5repacktest") - endmacro () - endif () - # -------------------------------------------------------------------- # Copy all the HDF5 files from the source directory into the test directory # -------------------------------------------------------------------- @@ -377,7 +344,8 @@ -D "TEST_OUTPUT=${resultfile}-${testname}.out" -D "TEST_EXPECT=${resultcode}" -D "TEST_MASK_ERROR=true" - -D "TEST_REFERENCE=${resultfile}-${testname}.tst" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}-${testname}.tst" -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) set_tests_properties (H5REPACK_MASK-${testname} PROPERTIES DEPENDS H5REPACK_MASK-${testname}-clear-objects) @@ -1450,15 +1418,20 @@ ADD_H5_VERIFY_INVALIDBOUNDS (latest_latest_invalid bounds_latest_latest.h5 0 1) ############################################################################## ### P L U G I N T E S T S ############################################################################## +if (BUILD_SHARED_LIBS) ADD_H5_UD_TEST (plugin_version_test 0 h5repack_layout.h5 -v -f UD=260,0,4,9,${H5_VERS_MAJOR},${H5_VERS_MINOR},${H5_VERS_RELEASE}) ADD_H5_UD_TEST (plugin_test 0 h5repack_layout.h5 -v -f UD=257,0,1,9) ADD_H5_UD_TEST (plugin_none 0 h5repack_layout.UD.h5 -v -f NONE) # check for no parameters ADD_H5_UD_TEST (plugin_zero 0 h5repack_layout.h5 -v -f UD=250,0,0) +endif () - if (HDF5_TEST_VFD) - # Run test with different Virtual File Driver - foreach (vfd ${VFD_LIST}) - ADD_VFD_TEST (${vfd} 0) - endforeach () - endif () +############################################################################## +############################################################################## +### V F D T E S T S ### +############################################################################## +############################################################################## + +if (HDF5_TEST_VFD) + include (CMakeVFDTests.cmake) +endif () diff --git a/tools/test/h5repack/CMakeVFDTests.cmake b/tools/test/h5repack/CMakeVFDTests.cmake new file mode 100644 index 0000000..2042f31 --- /dev/null +++ b/tools/test/h5repack/CMakeVFDTests.cmake @@ -0,0 +1,65 @@ +# +# Copyright by The HDF Group. +# All rights reserved. +# +# This file is part of HDF5. The full HDF5 copyright notice, including +# terms governing use, modification, and redistribution, is contained in +# the COPYING file, which can be found at the root of the source code +# distribution tree, or in https://support.hdfgroup.org/ftp/HDF5/releases. +# If you do not have access to either file, you may request a copy from +# help@hdfgroup.org. +# + +############################################################################## +############################################################################## +### T E S T I N G ### +############################################################################## +############################################################################## + + set (VFD_LIST + sec2 + stdio + core + split + multi + family + ) + + if (DIRECT_VFD) + set (VFD_LIST ${VFD_LIST} direct) + endif () + +############################################################################## +############################################################################## +### T H E T E S T S M A C R O S ### +############################################################################## +############################################################################## + + macro (ADD_VFD_TEST vfdname resultcode) + add_test ( + NAME H5REPACK-VFD-${vfdname}-h5repacktest + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5repacktest>" + -D "TEST_ARGS:STRING=" + -D "TEST_VFD:STRING=${vfdname}" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_OUTPUT=h5repacktest" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" + -P "${HDF_RESOURCES_DIR}/vfdTest.cmake" + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5REPACK-VFD-${vfdname}-h5repacktest PROPERTIES DEPENDS ${last_test}) + endif () + set (last_test "H5REPACK-VFD-${vfdname}-h5repacktest") + endmacro () + +############################################################################## +############################################################################## +### T H E T E S T S ### +############################################################################## +############################################################################## + + # Run test with different Virtual File Driver + foreach (vfd ${VFD_LIST}) + ADD_VFD_TEST (${vfd} 0) + endforeach () diff --git a/tools/test/h5repack/Makefile.in b/tools/test/h5repack/Makefile.in index 36abf80..013985e 100644 --- a/tools/test/h5repack/Makefile.in +++ b/tools/test/h5repack/Makefile.in @@ -591,7 +591,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -625,6 +624,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1493,7 +1493,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index b0a2f99..a36eb08 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -997,6 +997,7 @@ fi ############################################################################## ### T H E T E S T S ############################################################################## + # prepare for test COPY_TESTFILES_TO_TESTDIR diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c index f6166da..0ae570b 100644 --- a/tools/test/h5repack/h5repacktst.c +++ b/tools/test/h5repack/h5repacktst.c @@ -3728,7 +3728,7 @@ out: H5Pclose(fcpl); H5Fclose(fid); } H5E_END_TRY; - if(fd > 0) + if(fd >= 0) HDclose(fd); return -1; @@ -3797,7 +3797,7 @@ out: H5Pclose(fcpl); H5Fclose(fid); } H5E_END_TRY; - if(fd > 0) + if(fd >= 0) HDclose(fd); return -1; @@ -3838,7 +3838,7 @@ make_userblock_file(void) out: - if(fd > 0) + if(fd >= 0) HDclose(fd); return -1; @@ -4134,13 +4134,19 @@ int write_dset_in(hid_t loc_id, } /* create a type larger than TEST_BUFSIZE */ - if ((tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, 1, tdims)) < 0) + if ((tid = H5Tarray_create2(H5T_NATIVE_DOUBLE, 1, tdims)) < 0) { + HDfree(dbuf); goto out; + } size = H5Tget_size(tid); - if ((sid = H5Screate_simple(1, sdims, NULL)) < 0) + if ((sid = H5Screate_simple(1, sdims, NULL)) < 0) { + HDfree(dbuf); goto out; - if ((did = H5Dcreate2(loc_id, "arrayd", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + } + if ((did = H5Dcreate2(loc_id, "arrayd", tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) { + HDfree(dbuf); goto out; + } #if defined(WRITE_ARRAY) H5Dwrite(did, tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, dbuf); #endif @@ -4149,7 +4155,7 @@ int write_dset_in(hid_t loc_id, H5Dclose(did); H5Tclose(tid); H5Sclose(sid); - HDfree( dbuf ); + HDfree(dbuf); } /*------------------------------------------------------------------------- diff --git a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl index 55bf8fe..341a404 100644 --- a/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl +++ b/tools/test/h5repack/testfiles/h5repack_layout.h5-plugin_version_test.ddl @@ -11,7 +11,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -33,7 +33,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -55,7 +55,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -77,7 +77,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -99,7 +99,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -121,7 +121,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { @@ -143,7 +143,7 @@ GROUP "/" { USER_DEFINED_FILTER { FILTER_ID 260 COMMENT dynlib4 - PARAMS { 9 1 10 4 } + PARAMS { 9 1 10 5 } } } FILLVALUE { diff --git a/tools/test/h5stat/CMakeTests.cmake b/tools/test/h5stat/CMakeTests.cmake index bd55ac1..ec8c9b1 100644 --- a/tools/test/h5stat/CMakeTests.cmake +++ b/tools/test/h5stat/CMakeTests.cmake @@ -39,23 +39,30 @@ h5stat_newgrat h5stat_newgrat-UG h5stat_newgrat-UA - h5stat_err1_links h5stat_idx h5stat_links1 h5stat_links2 h5stat_links3 h5stat_links4 h5stat_links5 - h5stat_err1_dims h5stat_dims1 h5stat_dims2 - h5stat_err1_numattrs - h5stat_err2_numattrs h5stat_numattrs1 h5stat_numattrs2 h5stat_numattrs3 h5stat_numattrs4 ) + set (HDF5_REFERENCE_ERR_FILES + h5stat_err_refcount + h5stat_err_old_layout + h5stat_err_old_fill + h5stat_err1_dims + h5stat_err1_links + h5stat_err1_numattrs + h5stat_err2_numattrs + h5stat_notexist + h5stat_nofile + ) set (HDF5_REFERENCE_TEST_FILES h5stat_err_refcount.h5 h5stat_err_old_layout.h5 @@ -71,6 +78,10 @@ HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${ddl_file}.ddl" "${PROJECT_BINARY_DIR}/${ddl_file}.ddl" "h5stat_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${h5_file}.err" "${PROJECT_BINARY_DIR}/${h5_file}.err" "h5stat_files") + endforeach () + foreach (h5_file ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${HDF5_TOOLS_TEST_H5STAT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/${h5_file}" "h5stat_files") endforeach () @@ -118,6 +129,43 @@ endif () endmacro () + macro (ADD_H5_ERR_TEST resultfile resultcode) + # If using memchecker add tests without using scripts + if (HDF5_ENABLE_USING_MEMCHECKER) + add_test (NAME H5STAT-${resultfile} COMMAND $<TARGET_FILE:h5stat> ${ARGN}) + if (NOT "${resultcode}" STREQUAL "0") + set_tests_properties (H5STAT-${resultfile} PROPERTIES WILL_FAIL "true") + endif () + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5STAT-${resultfile} PROPERTIES DEPENDS ${last_test}) + endif () + else (HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5STAT-${resultfile}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + ${resultfile}.out + ${resultfile}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5STAT-${resultfile}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5STAT-${resultfile} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5stat>" + -D "TEST_ARGS=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}" + -D "TEST_OUTPUT=${resultfile}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5STAT-${resultfile} PROPERTIES DEPENDS H5STAT-${resultfile}-clear-objects) + endif () + endmacro () + ############################################################################## ############################################################################## ### T H E T E S T S ### @@ -173,7 +221,7 @@ # -g -l 8 # --links=8 # --links=20 -g - ADD_H5_TEST (h5stat_err1_links 1 -l 0 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_links 1 -l 0 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links1 0 -g -l 8 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links2 0 --links=8 h5stat_threshold.h5) ADD_H5_TEST (h5stat_links3 0 --links=20 -g h5stat_threshold.h5) @@ -188,7 +236,7 @@ # -d --dims=-1 (incorrect threshold value) # -gd -m 5 # -d --di=15 - ADD_H5_TEST (h5stat_err1_dims 1 -d --dims=-1 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_dims 1 -d --dims=-1 h5stat_threshold.h5) ADD_H5_TEST (h5stat_dims1 0 -gd -m 5 h5stat_threshold.h5) ADD_H5_TEST (h5stat_dims2 0 -d --di=15 h5stat_threshold.h5) # @@ -198,8 +246,8 @@ # -AS -a 10 # -a 1 # -A --numattrs=25 - ADD_H5_TEST (h5stat_err1_numattrs 1 -a -2 h5stat_threshold.h5) - ADD_H5_TEST (h5stat_err2_numattrs 1 --numattrs h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err1_numattrs 1 -a -2 h5stat_threshold.h5) + ADD_H5_ERR_TEST (h5stat_err2_numattrs 1 --numattrs h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs1 0 -AS -a 10 h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs2 0 -a 1 h5stat_threshold.h5) ADD_H5_TEST (h5stat_numattrs3 0 -A --numattrs=25 h5stat_threshold.h5) diff --git a/tools/test/h5stat/Makefile.in b/tools/test/h5stat/Makefile.in index 91e781f..e292740 100644 --- a/tools/test/h5stat/Makefile.in +++ b/tools/test/h5stat/Makefile.in @@ -551,7 +551,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -585,6 +584,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1430,7 +1430,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/h5stat/h5stat_gentest.c b/tools/test/h5stat/h5stat_gentest.c index 2daf24b..ae11032 100644 --- a/tools/test/h5stat/h5stat_gentest.c +++ b/tools/test/h5stat/h5stat_gentest.c @@ -14,7 +14,7 @@ /* * Generate the binary hdf5 files for the h5stat tests. * Usage: just execute the program without any arguments will - * generate all the binary hdf5 files + * generate all the binary hdf5 files * * If you regenerate the test files (e.g., changing some code, * trying it on a new platform, ...), you need to verify the correctness @@ -24,25 +24,25 @@ #include "H5private.h" /* For gen_newgrat_file() */ -#define NEWGRAT_FILE "h5stat_newgrat.h5" -#define DATASET_NAME "DATASET_NAME" -#define GROUP_NAME "GROUP" -#define ATTR_NAME "ATTR" -#define NUM_GRPS 35000 -#define NUM_ATTRS 100 +#define NEWGRAT_FILE "h5stat_newgrat.h5" +#define DATASET_NAME "DATASET_NAME" +#define GROUP_NAME "GROUP" +#define ATTR_NAME "ATTR" +#define NUM_GRPS 35000 +#define NUM_ATTRS 100 /* Declarations for gen_idx_file() */ -#define IDX_FILE "h5stat_idx.h5" -#define DSET "dset" -#define DSET_FILTER "dset_filter" +#define IDX_FILE "h5stat_idx.h5" +#define DSET "dset" +#define DSET_FILTER "dset_filter" /* For gen_threshold_file() */ -#define THRESHOLD_FILE "h5stat_threshold.h5" -#define THRES_ATTR_NAME "attr" -#define THRES_ATTR_GRP_NAME "grp_attr" -#define THRES_DSET_NAME "dset" -#define THRES_NUM 10 -#define THRES_NUM_25 25 +#define THRESHOLD_FILE "h5stat_threshold.h5" +#define THRES_ATTR_NAME "attr" +#define THRES_ATTR_GRP_NAME "grp_attr" +#define THRES_DSET_NAME "dset" +#define THRES_NUM 10 +#define THRES_NUM_25 25 /* For gen_err_refcount() */ #define ERR_REFCOUNT_FILE "h5stat_err_refcount.h5" @@ -51,7 +51,7 @@ * Generate HDF5 file with latest format with * NUM_GRPS groups and NUM_ATTRS attributes for the dataset */ -static void +static void gen_newgrat_file(const char *fname) { hid_t fcpl = -1; /* File creation property */ @@ -62,79 +62,66 @@ gen_newgrat_file(const char *fname) hid_t sid = -1; /* Dataspace id */ hid_t attr_id = -1; /* Attribute id */ hid_t did = -1; /* Dataset id */ - char name[30]; /* Group name */ - char attrname[30]; /* Attribute name */ - int i; /* Local index variable */ + char name[30]; /* Group name */ + char attrname[30]; /* Attribute name */ + int i; /* Local index variable */ /* Get a copy file access property list */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - goto error; + goto error; /* Set to use latest library format */ if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) - goto error; + goto error; /* Get a copy of file creation property list */ if((fcpl = H5Pcreate(H5P_FILE_CREATE)) < 0) - goto error; + goto error; /* Set file space handling strategy */ if(H5Pset_file_space_strategy(fcpl, H5F_FSPACE_STRATEGY_FSM_AGGR, 1, (hsize_t)1) < 0) - goto error; + goto error; /* Create file */ if((fid = H5Fcreate(fname, H5F_ACC_TRUNC, fcpl, fapl)) < 0) - goto error; + goto error; /* Create NUM_GRPS groups in the root group */ for(i = 1; i <= NUM_GRPS; i++) { sprintf(name, "%s%d", GROUP_NAME,i); if((gid = H5Gcreate2(fid, name, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Gclose(gid) < 0) - goto error; + goto error; } /* end for */ /* Create a datatype to commit and use */ if((tid = H5Tcopy(H5T_NATIVE_INT)) < 0) - goto error; + goto error; /* Create dataspace for dataset */ if((sid = H5Screate(H5S_SCALAR)) < 0) - goto error; + goto error; /* Create dataset */ if((did = H5Dcreate2(fid, DATASET_NAME, tid, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create NUM_ATTRS for the dataset */ for(i = 1; i <= NUM_ATTRS; i++) { sprintf(attrname, "%s%d", ATTR_NAME,i); if((attr_id = H5Acreate2(did, attrname, tid, sid, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Aclose(attr_id) < 0) - goto error; + goto error; } /* end for */ /* Close dataset, dataspace, datatype, file */ - if(H5Pclose(fapl) < 0) - goto error; - if(H5Pclose(fcpl) < 0) - goto error; - if(H5Dclose(did) < 0) - goto error; - if(H5Sclose(sid) < 0) - goto error; - if(H5Tclose(tid) < 0) - goto error; - if(H5Fclose(fid) < 0) - goto error; - error: H5E_BEGIN_TRY { - H5Pclose(fapl); - H5Pclose(fcpl); - H5Aclose(attr_id); + H5Pclose(fapl); + H5Pclose(fcpl); + H5Aclose(attr_id); H5Dclose(did); H5Tclose(tid); H5Sclose(sid); @@ -145,192 +132,175 @@ error: /* * Generate an HDF5 file with groups, datasets, attributes for testing the options: - * -l N (--links=N): Set the threshold for # of links when printing information for small groups. - * -m N (--dims=N): Set the threshold for the # of dimension sizes when printing information for small datasets. - * -a N (--numattrs=N): Set the threshold for the # of attributes when printing information for small # of attributes. + * -l N (--links=N): Set the threshold for # of links when printing information for small groups. + * -m N (--dims=N): Set the threshold for the # of dimension sizes when printing information for small datasets. + * -a N (--numattrs=N): Set the threshold for the # of attributes when printing information for small # of attributes. */ static void gen_threshold_file(const char *fname) { - hid_t fid; /* File ID */ - hid_t sid0, sid1, sid2, sid3, sid4; /* Dataspace IDs */ - hid_t did; /* Dataset ID */ - hid_t attr_id; /* Attribute ID */ - hid_t gid; /* Group ID */ - hsize_t two_dims[] = {2, 5}; /* Dimension array */ - hsize_t one_dims[] = {6}; /* Dimension array */ - hsize_t zero_dims[] = {0}; /* Dimension array */ - char name[30]; /* Name */ - unsigned i; /* Local index variable */ + hid_t fid = -1; /* File ID */ + hid_t sid0 = -1; /* Dataspace IDs */ + hid_t sid1 = -1; /* Dataspace IDs */ + hid_t sid2 = -1; /* Dataspace IDs */ + hid_t sid3 = -1; /* Dataspace IDs */ + hid_t sid4 = -1; /* Dataspace IDs */ + hid_t did = -1; /* Dataset ID */ + hid_t attr_id = -1; /* Attribute ID */ + hid_t gid = -1; /* Group ID */ + hsize_t two_dims[] = {2, 5}; /* Dimension array */ + hsize_t one_dims[] = {6}; /* Dimension array */ + hsize_t zero_dims[] = {0}; /* Dimension array */ + char name[30]; /* Name */ + unsigned i; /* Local index variable */ /* Create file */ if((fid = H5Fcreate(fname, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create 1-D dataspace with zero dimension size */ if((sid0 = H5Screate_simple(1, zero_dims, NULL)) < 0) - goto error; + goto error; /* Create 1-D dataspace with non-zero dimension size*/ if((sid1 = H5Screate_simple(1, one_dims, NULL)) < 0) - goto error; + goto error; /* Create 2-D dataspace */ if((sid2 = H5Screate_simple(2, two_dims, NULL)) < 0) - goto error; + goto error; /* Create scalar dataspace */ if((sid3 = H5Screate(H5S_SCALAR)) < 0) - goto error; + goto error; /* Create null dataspace */ if((sid4 = H5Screate(H5S_NULL)) < 0) - goto error; + goto error; /* Create an attribute for the root group */ if((attr_id = H5Acreate2(fid, "attr", H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Aclose(attr_id) < 0) - goto error; + goto error; /* Create 1-D dataset with zero dimension size for the root group */ if((did = H5Dcreate2(fid, "zero_dset", H5T_NATIVE_UCHAR, sid0, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create 11 attributes for the dataset */ for(i = 1; i <= (THRES_NUM+1); i++) { sprintf(name, "%s%d", THRES_ATTR_NAME,i); if((attr_id = H5Acreate2(did, name, H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Aclose(attr_id) < 0) - goto error; + goto error; } if(H5Dclose(did) < 0) - goto error; + goto error; /* Create dataset with scalar dataspace for the root group */ if((did = H5Dcreate2(fid, "scalar_dset", H5T_NATIVE_UCHAR, sid3, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Dclose(did) < 0) - goto error; + goto error; /* Create dataset with null dataspace for the root group */ if((did = H5Dcreate2(fid, "null_dset", H5T_NATIVE_UCHAR, sid4, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Dclose(did) < 0) - goto error; + goto error; /* Create 2-D dataset for the root group */ if((did = H5Dcreate2(fid, "dset", H5T_NATIVE_UCHAR, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create 10 attributes for the 2-D dataset */ for(i = 1; i <= THRES_NUM; i++) { sprintf(name, "%s%d", THRES_ATTR_NAME,i); if((attr_id = H5Acreate2(did, name, H5T_NATIVE_INT, sid1, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Aclose(attr_id) < 0) - goto error; + goto error; } if(H5Dclose(did) < 0) - goto error; + goto error; /* Create first group */ if((gid = H5Gcreate2(fid, "group1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create an attribute for the group */ if((attr_id = H5Acreate2(gid, "ATTR", H5T_NATIVE_INT, sid3, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Close attribute */ if(H5Aclose(attr_id) < 0) - goto error; + goto error; /* Create 10 1-D datasets with non-zero dimension size for the group */ for(i = 1; i <= THRES_NUM; i++) { - /* set up dataset name */ + /* set up dataset name */ sprintf(name, "%s%d", THRES_DSET_NAME,i); - /* Create the dataset */ - if((did = H5Dcreate2(gid, name, H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + /* Create the dataset */ + if((did = H5Dcreate2(gid, name, H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + goto error; - /* Close the dataset */ + /* Close the dataset */ if(H5Dclose(did) < 0) - goto error; + goto error; } /* Close the group */ if(H5Gclose(gid) < 0) - goto error; + goto error; /* Create second group */ if((gid = H5Gcreate2(fid, "group2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create 25 attributes for the group */ for(i = 1; i <= THRES_NUM_25; i++) { - /* Set up attribute name */ + /* Set up attribute name */ sprintf(name, "%s%d", THRES_ATTR_GRP_NAME,i); - /* Create the attribute */ + /* Create the attribute */ if((attr_id = H5Acreate2(gid, name, H5T_NATIVE_INT, sid2, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; - /* Close the attribute */ + /* Close the attribute */ if(H5Aclose(attr_id) < 0) - goto error; + goto error; } /* Close the group */ if(H5Gclose(gid) < 0) - goto error; + goto error; /* Create third group */ if((gid = H5Gcreate2(fid, "group3", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + goto error; /* Create 9 1-D datasets with non-zero dimension size for the group */ for(i = 1; i < THRES_NUM; i++) { - /* set up dataset name */ + /* set up dataset name */ sprintf(name, "%s%d", THRES_DSET_NAME,i); - /* Create the dataset */ - if((did = H5Dcreate2(gid, name, H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) - goto error; + /* Create the dataset */ + if((did = H5Dcreate2(gid, name, H5T_NATIVE_UCHAR, sid1, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT)) < 0) + goto error; - /* Close the dataset */ + /* Close the dataset */ if(H5Dclose(did) < 0) - goto error; + goto error; } - /* Close the group */ - if(H5Gclose(gid) < 0) - goto error; - - - /* Close dataspaces */ - if(H5Sclose(sid0) < 0) - goto error; - if(H5Sclose(sid1) < 0) - goto error; - if(H5Sclose(sid2) < 0) - goto error; - if(H5Sclose(sid3) < 0) - goto error; - if(H5Sclose(sid4) < 0) - goto error; - - /* Close file */ - if(H5Fclose(fid) < 0) - goto error; - error: H5E_BEGIN_TRY { H5Gclose(gid); - H5Aclose(attr_id); + H5Aclose(attr_id); H5Dclose(did); H5Sclose(sid0); H5Sclose(sid1); @@ -346,84 +316,73 @@ error: * Function: gen_idx_file * * Purpose: Create a file with datasets that use Fixed Array indexing: - * one dataset: fixed dimension, chunked layout, w/o filters - * one dataset: fixed dimension, chunked layout, w/ filters + * one dataset: fixed dimension, chunked layout, w/o filters + * one dataset: fixed dimension, chunked layout, w/ filters * */ -static void +static void gen_idx_file(const char *fname) { - hid_t fapl = -1; /* file access property id */ - hid_t fid = -1; /* file id */ - hid_t sid = -1; /* space id */ - hid_t dcpl = -1; /* dataset creation property id */ - hid_t did = -1, did2 = -1; /* dataset id */ - hsize_t dims[1] = {10}; /* dataset dimension */ - hsize_t c_dims[1] = {2}; /* chunk dimension */ - int i; /* local index variable */ - int buf[10]; /* data buffer */ + hid_t fapl = -1; /* file access property id */ + hid_t fid = -1; /* file id */ + hid_t sid = -1; /* space id */ + hid_t dcpl = -1; /* dataset creation property id */ + hid_t did = -1, did2 = -1; /* dataset id */ + hsize_t dims[1] = {10}; /* dataset dimension */ + hsize_t c_dims[1] = {2}; /* chunk dimension */ + int i; /* local index variable */ + int buf[10]; /* data buffer */ /* Get a copy of the file access property */ if((fapl = H5Pcreate(H5P_FILE_ACCESS)) < 0) - goto error; + goto error; /* Set the "use the latest format" bounds for creating objects in the file */ if(H5Pset_libver_bounds(fapl, H5F_LIBVER_LATEST, H5F_LIBVER_LATEST) < 0) - goto error; + goto error; /* Create file */ if((fid = H5Fcreate(fname, H5F_ACC_TRUNC, H5P_DEFAULT, fapl)) < 0) - goto error; + goto error; /* Create data */ for(i = 0; i < 10; i++) - buf[i] = i; + buf[i] = i; /* Set chunk */ if((dcpl = H5Pcreate(H5P_DATASET_CREATE)) < 0) - goto error; + goto error; if(H5Pset_chunk(dcpl, 1, c_dims) < 0) - goto error; + goto error; /* Create a 1D dataset */ if((sid = H5Screate_simple(1, dims, NULL)) < 0) - goto error; + goto error; if((did = H5Dcreate2(fid, DSET, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) - goto error; - + goto error; + /* Write to the dataset */ if(H5Dwrite(did, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - goto error; + goto error; #if defined (H5_HAVE_FILTER_DEFLATE) /* set deflate data */ if(H5Pset_deflate(dcpl, 9) < 0) - goto error; + goto error; /* Create and write the dataset */ if((did2 = H5Dcreate2(fid, DSET_FILTER, H5T_NATIVE_INT, sid, H5P_DEFAULT, dcpl, H5P_DEFAULT)) < 0) - goto error; + goto error; if(H5Dwrite(did2, H5T_NATIVE_INT, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf) < 0) - goto error; + goto error; /* Close the dataset */ if(H5Dclose(did2) < 0) - goto error; + goto error; #endif /* closing: dataspace, dataset, file */ - if(H5Pclose(fapl) < 0) - goto error; - if(H5Pclose(dcpl) < 0) - goto error; - if(H5Sclose(sid) < 0) - goto error; - if(H5Dclose(did) < 0) - goto error; - if(H5Fclose(fid) < 0) - goto error; - error: H5E_BEGIN_TRY { H5Pclose(fapl); @@ -451,7 +410,7 @@ error: * H5O_refcount_decode in the jira issue. * */ -static void +static void gen_err_refcount(const char *fname) { hid_t fid = -1; /* File identifier */ @@ -525,16 +484,13 @@ gen_err_refcount(const char *fname) /* Offset of the message ID to modify is as follows: */ /* 4520: the offset of the object header containing the attribute message with the committed datatype */ - /* 24: the offset in the object header containing the version of the + /* 24: the offset in the object header containing the version of the attribute message */ - if((fd = HDopen(fname, O_RDWR, 0633)) < 0) - goto error; - if(HDlseek(fd, 4520+24, SEEK_SET) < 0) - goto error; - if(HDwrite(fd, &val, 2) < 0) - goto error; - if(HDclose(fd) < 0) - goto error; + if((fd = HDopen(fname, O_RDWR, 0633)) >= 0) { + HDlseek(fd, 4520+24, SEEK_SET); + HDwrite(fd, &val, 2); + HDclose(fd); + } error: H5E_BEGIN_TRY { @@ -548,8 +504,8 @@ error: } H5E_END_TRY; } /* gen_err_refcount() */ -/* - * The following two test files are generated with older versions +/* + * The following two test files are generated with older versions * of the library for HDFFV-10333. They are used for testing in * testh5stat.sh.in. * @@ -559,7 +515,7 @@ error: * Then a "0" is written to the "dimension" field in the layout * message to trigger the error. * This is to verify HDFFV-10333 that h5stat will exit gracefully - * when encountered error similar to H5O__layout_decode in the + * when encountered error similar to H5O__layout_decode in the * jira issue. * * (2) h5stat_err_old_fill.h5 @@ -568,7 +524,7 @@ error: * Then an illegal size is written to the "size" fild in the * fill value message to trigger the error. * This is to verify HDFFV-10333 that h5stat will exit gracefully - * when encountered error similar to H5O_fill_old_decode in the + * when encountered error similar to H5O_fill_old_decode in the * jira issue. */ diff --git a/tools/test/h5stat/testfiles/h5stat_err1_dims.ddl b/tools/test/h5stat/testfiles/h5stat_err1_dims.err index 86d375b..86d375b 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_dims.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_dims.err diff --git a/tools/test/h5stat/testfiles/h5stat_err1_links.ddl b/tools/test/h5stat/testfiles/h5stat_err1_links.err index d43207c..d43207c 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_links.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_links.err diff --git a/tools/test/h5stat/testfiles/h5stat_err2_numattrs.ddl b/tools/test/h5stat/testfiles/h5stat_err1_numattrs.err index 01b6c18..01b6c18 100644 --- a/tools/test/h5stat/testfiles/h5stat_err2_numattrs.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err1_numattrs.err diff --git a/tools/test/h5stat/testfiles/h5stat_err1_numattrs.ddl b/tools/test/h5stat/testfiles/h5stat_err2_numattrs.err index 01b6c18..01b6c18 100644 --- a/tools/test/h5stat/testfiles/h5stat_err1_numattrs.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err2_numattrs.err diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl b/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl index e751b7f..5cc1e32 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_old_fill.ddl @@ -1,2 +1 @@ Filename: h5stat_err_old_fill.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_old_fill.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_fill.err b/tools/test/h5stat/testfiles/h5stat_err_old_fill.err new file mode 100644 index 0000000..8b886d2 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_old_fill.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_old_fill.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl b/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl index a3e27e2..112190c 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_old_layout.ddl @@ -1,2 +1 @@ Filename: h5stat_err_old_layout.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_old_layout.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_old_layout.err b/tools/test/h5stat/testfiles/h5stat_err_old_layout.err new file mode 100644 index 0000000..7aa2fa7 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_old_layout.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_old_layout.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl b/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl index 1f1b491..41e533e 100644 --- a/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl +++ b/tools/test/h5stat/testfiles/h5stat_err_refcount.ddl @@ -1,2 +1 @@ Filename: h5stat_err_refcount.h5 -h5stat error: unable to traverse objects/links in file "h5stat_err_refcount.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_err_refcount.err b/tools/test/h5stat/testfiles/h5stat_err_refcount.err new file mode 100644 index 0000000..d176996 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_err_refcount.err @@ -0,0 +1 @@ +h5stat error: unable to traverse objects/links in file "h5stat_err_refcount.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_nofile.ddl b/tools/test/h5stat/testfiles/h5stat_nofile.ddl index 7171320..01e39af 100644 --- a/tools/test/h5stat/testfiles/h5stat_nofile.ddl +++ b/tools/test/h5stat/testfiles/h5stat_nofile.ddl @@ -23,4 +23,3 @@ Usage: h5stat [OPTIONS] file -s, --freespace Print free space information -S, --summary Print summary of file space information --enable-error-stack Prints messages from the HDF5 error stack as they occur -h5stat error: missing file name diff --git a/tools/test/h5stat/testfiles/h5stat_nofile.err b/tools/test/h5stat/testfiles/h5stat_nofile.err new file mode 100644 index 0000000..3b7e979 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_nofile.err @@ -0,0 +1 @@ +h5stat error: missing file name diff --git a/tools/test/h5stat/testfiles/h5stat_notexist.ddl b/tools/test/h5stat/testfiles/h5stat_notexist.ddl index cc25e43..7f71941 100644 --- a/tools/test/h5stat/testfiles/h5stat_notexist.ddl +++ b/tools/test/h5stat/testfiles/h5stat_notexist.ddl @@ -1,2 +1 @@ Filename: notexist.h5 -h5stat error: unable to open file "notexist.h5" diff --git a/tools/test/h5stat/testfiles/h5stat_notexist.err b/tools/test/h5stat/testfiles/h5stat_notexist.err new file mode 100644 index 0000000..c1d9e54 --- /dev/null +++ b/tools/test/h5stat/testfiles/h5stat_notexist.err @@ -0,0 +1 @@ +h5stat error: unable to open file "notexist.h5" diff --git a/tools/test/h5stat/testh5stat.sh.in b/tools/test/h5stat/testh5stat.sh.in index 5082daf..69b856e 100644 --- a/tools/test/h5stat/testh5stat.sh.in +++ b/tools/test/h5stat/testh5stat.sh.in @@ -79,6 +79,18 @@ $SRC_H5STAT_TESTFILES/h5stat_idx.h5 $SRC_H5STAT_TESTFILES/h5stat_threshold.h5 " +LIST_ERR_TEST_FILES=" +$SRC_H5STAT_TESTFILES/h5stat_err_refcount.err +$SRC_H5STAT_TESTFILES/h5stat_err_old_layout.err +$SRC_H5STAT_TESTFILES/h5stat_err_old_fill.err +$SRC_H5STAT_TESTFILES/h5stat_err1_links.err +$SRC_H5STAT_TESTFILES/h5stat_err1_dims.err +$SRC_H5STAT_TESTFILES/h5stat_err1_numattrs.err +$SRC_H5STAT_TESTFILES/h5stat_err2_numattrs.err +$SRC_H5STAT_TESTFILES/h5stat_notexist.err +$SRC_H5STAT_TESTFILES/h5stat_nofile.err +" + LIST_OTHER_TEST_FILES=" $SRC_H5STAT_TESTFILES/h5stat_err_refcount.ddl $SRC_H5STAT_TESTFILES/h5stat_err_old_layout.ddl @@ -100,17 +112,13 @@ $SRC_H5STAT_TESTFILES/h5stat_newgrat.ddl $SRC_H5STAT_TESTFILES/h5stat_newgrat-UG.ddl $SRC_H5STAT_TESTFILES/h5stat_newgrat-UA.ddl $SRC_H5STAT_TESTFILES/h5stat_idx.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_links.ddl $SRC_H5STAT_TESTFILES/h5stat_links1.ddl $SRC_H5STAT_TESTFILES/h5stat_links2.ddl $SRC_H5STAT_TESTFILES/h5stat_links3.ddl $SRC_H5STAT_TESTFILES/h5stat_links4.ddl $SRC_H5STAT_TESTFILES/h5stat_links5.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_dims.ddl $SRC_H5STAT_TESTFILES/h5stat_dims1.ddl $SRC_H5STAT_TESTFILES/h5stat_dims2.ddl -$SRC_H5STAT_TESTFILES/h5stat_err1_numattrs.ddl -$SRC_H5STAT_TESTFILES/h5stat_err2_numattrs.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs1.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs2.ddl $SRC_H5STAT_TESTFILES/h5stat_numattrs3.ddl @@ -120,7 +128,7 @@ $SRC_H5STAT_TESTFILES/h5stat_numattrs4.ddl # # copy test files and expected output files from source dirs to test dir # -COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_OTHER_TEST_FILES" +COPY_TESTFILES="$LIST_HDF5_TEST_FILES $LIST_ERR_TEST_FILES $LIST_OTHER_TEST_FILES" COPY_TESTFILES_TO_TESTDIR() { @@ -184,8 +192,9 @@ TESTING() { # TOOLTEST() { expect="$TESTDIR/$1" + expect_err="$TESTDIR/`basename $1 .ddl`.err" actual="$TESTDIR/`basename $1 .ddl`.out" - actual_err="$TESTDIR/`basename $1 .ddl`.err" + actual_err="$TESTDIR/`basename $1 .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav shift @@ -202,14 +211,17 @@ TOOLTEST() { STDOUT_FILTER $actual cp $actual_err $actual_err_sav STDERR_FILTER $actual_err - cat $actual_err >> $actual if [ ! -f $expect ]; then - # Create the expect file if it doesn't yet exist. - echo " CREATED" - cp $actual $expect - echo " Expected result (*.ddl) missing" - nerrors="`expr $nerrors + 1`" + # Compare error files if the expect file doesn't exist. + if $CMP $expect_err $actual_err; then + echo " PASSED" + else + echo "*FAILED*" + echo " Expected result (*.err) differs from actual result (*.out.err)" + nerrors="`expr $nerrors + 1`" + test yes = "$verbose" && $DIFF $expect_err $actual_err |sed 's/^/ /' + fi elif $CMP $expect $actual; then echo " PASSED" else @@ -249,7 +261,6 @@ TOOLTEST h5stat_help2.ddl --help TOOLTEST h5stat_notexist.ddl notexist.h5 TOOLTEST h5stat_nofile.ddl '' - # Test file with groups, compressed datasets, user-applied fileters, etc. # h5stat_filters.h5 is a copy of ../../testfiles/tfilters.h5 as of release 1.8.0-alpha4 TOOLTEST h5stat_filters.ddl h5stat_filters.h5 diff --git a/tools/test/misc/CMakeTestsClear.cmake b/tools/test/misc/CMakeTestsClear.cmake index a51d0e9..c46ac59 100644 --- a/tools/test/misc/CMakeTestsClear.cmake +++ b/tools/test/misc/CMakeTestsClear.cmake @@ -49,8 +49,6 @@ h5clear_missing_file.ddl h5clear_noclose_after_size.ddl h5clear_noclose_before_size.ddl - h5clear_no_mdc_image.ddl - h5clear_open_fail.ddl h5clear_status_noclose_after_size.ddl h5clear_usage.ddl h5clear_user_equal_after_size.ddl @@ -60,10 +58,17 @@ h5clear_user_less_after_size.ddl h5clear_user_less_before_size.ddl ) + set (HDF5_REFERENCE_ERR_FILES + h5clear_no_mdc_image.err + h5clear_open_fail.err + ) foreach (h5_file ${HDF5_TEST_FILES} ${HDF5_SEC2_TEST_FILES} ${HDF5_REFERENCE_TEST_FILES}) HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5clear_files") endforeach () + foreach (h5_file ${HDF5_REFERENCE_ERR_FILES}) + HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/${h5_file}" "h5clear_files") + endforeach () # make second copy of h5clear_sec2.h5 foreach (h5_file ${HDF5_SEC2_TEST_FILES}) HDFTEST_COPY_FILE("${PROJECT_SOURCE_DIR}/testfiles/${h5_file}" "${PROJECT_BINARY_DIR}/testfiles/orig_${h5_file}" "h5clear_files") @@ -108,6 +113,35 @@ endif () endmacro () + macro (ADD_H5_ERR_CMP testname resultfile resultcode) + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5CLEAR_CMP-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${testname}.out + testfiles/${testname}.out.err + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5CLEAR_CMP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5CLEAR_CMP-${testname} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5clear>" + -D "TEST_ARGS:STRING=${ARGN}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5CLEAR_CMP-${testname} PROPERTIES DEPENDS H5CLEAR_CMP-${testname}-clear-objects) + set (last_test "H5CLEAR_CMP-${testname}") + endif () + endmacro () + macro (ADD_H5_CMP_WITH_COPY testname resultcode resultfile testfile) if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -144,6 +178,43 @@ endif () endmacro () + macro (ADD_H5_ERR_CMP_WITH_COPY testname resultcode resultfile testfile) + if (NOT HDF5_ENABLE_USING_MEMCHECKER) + add_test ( + NAME H5CLEAR_CMP-${testname}-clear-objects + COMMAND ${CMAKE_COMMAND} + -E remove + testfiles/${testname}.out + testfiles/${testname}.out.err + testfiles/${testfile} + ) + if (NOT "${last_test}" STREQUAL "") + set_tests_properties (H5CLEAR_CMP-${testname}-clear-objects PROPERTIES DEPENDS ${last_test}) + endif () + add_test ( + NAME H5CLEAR_CMP-copy_${testname} + COMMAND ${CMAKE_COMMAND} + -E copy_if_different + "${PROJECT_SOURCE_DIR}/testfiles/${testfile}" "${PROJECT_BINARY_DIR}/testfiles/${testfile}" + ) + set_tests_properties (H5CLEAR_CMP-copy_${testname} PROPERTIES DEPENDS H5CLEAR_CMP-${testname}-clear-objects) + add_test ( + NAME H5CLEAR_CMP-${testname} + COMMAND "${CMAKE_COMMAND}" + -D "TEST_PROGRAM=$<TARGET_FILE:h5clear>" + -D "TEST_ARGS:STRING=${ARGN};${testfile}" + -D "TEST_FOLDER=${PROJECT_BINARY_DIR}/testfiles" + -D "TEST_OUTPUT=${testname}.out" + -D "TEST_EXPECT=${resultcode}" + -D "TEST_REFERENCE=${resultfile}.mty" + -D "TEST_ERRREF=${resultfile}.err" + -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" + ) + set_tests_properties (H5CLEAR_CMP-${testname} PROPERTIES DEPENDS H5CLEAR_CMP-copy_${testname}) + set (last_test "H5CLEAR_CMP-${testname}") + endif () + endmacro () + macro (ADD_H5_RETTEST testname resultcode) if (NOT HDF5_ENABLE_USING_MEMCHECKER) add_test ( @@ -347,11 +418,11 @@ endif() ADD_H5_CMP (h5clr_usage_junk h5clear_usage 1 "" junk.h5) ADD_H5_CMP (h5clr_usage_none h5clear_usage 1 "" orig_h5clear_sec2_v3.h5) ADD_H5_CMP (h5clr_missing_file_m h5clear_missing_file 1 "-m") - ADD_H5_CMP (h5clr_open_fail_s h5clear_open_fail 1 "-s" junk.h5) + ADD_H5_ERR_CMP (h5clr_open_fail_s h5clear_open_fail 1 "-s" junk.h5) ADD_H5_CMP (h5clr_missing_file_ms h5clear_missing_file 1 "-m" "-s") - ADD_H5_CMP (h5clr_open_fail_ms h5clear_open_fail 1 "-m" "-s" junk.h5) - ADD_H5_CMP (h5clr_no_mdc_image_m h5clear_no_mdc_image 0 "-m" orig_h5clear_sec2_v2.h5) - ADD_H5_CMP (h5clr_no_mdc_image_ms h5clear_no_mdc_image 0 "-s" "-m" orig_h5clear_sec2_v0.h5) + ADD_H5_ERR_CMP (h5clr_open_fail_ms h5clear_open_fail 1 "-m" "-s" junk.h5) + ADD_H5_ERR_CMP (h5clr_no_mdc_image_m h5clear_no_mdc_image 0 "-m" orig_h5clear_sec2_v2.h5) + ADD_H5_ERR_CMP (h5clr_no_mdc_image_ms h5clear_no_mdc_image 0 "-s" "-m" orig_h5clear_sec2_v0.h5) # # # @@ -382,8 +453,8 @@ endif() # # # h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear: - ADD_H5_CMP (h5clr_mdc_image_m h5clear_no_mdc_image 0 "-m" mod_h5clear_mdc_image.h5) - ADD_H5_CMP (h5clr_mdc_image_sm h5clear_no_mdc_image 0 "-s" "-m" mod_h5clear_mdc_image2.h5) + ADD_H5_ERR_CMP (h5clr_mdc_image_m h5clear_no_mdc_image 0 "-m" mod_h5clear_mdc_image.h5) + ADD_H5_ERR_CMP (h5clr_mdc_image_sm h5clear_no_mdc_image 0 "-s" "-m" mod_h5clear_mdc_image2.h5) # # # @@ -404,7 +475,7 @@ endif() # "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) # (no output, check exit code) # "h5clear --filesize h5clear_status_noclose.h5" (print EOA/EOF after the last action) - ADD_H5_CMP_WITH_COPY (h5clr_open_fail_nc_s 1 h5clear_open_fail h5clear_status_noclose.h5 "--filesize") + ADD_H5_ERR_CMP_WITH_COPY (h5clr_open_fail_nc_s 1 h5clear_open_fail h5clear_status_noclose.h5 "--filesize") ADD_H5_RETTEST (h5clr_mdc_image_nc "false" "-s" "--increment=0" h5clear_status_noclose.h5) ADD_H5_CMP (h5clr_no_mdc_image_nc_m h5clear_status_noclose_after_size 0 "--filesize" h5clear_status_noclose.h5) # diff --git a/tools/test/misc/CMakeTestsRepart.cmake b/tools/test/misc/CMakeTestsRepart.cmake index 37da903..8edd243 100644 --- a/tools/test/misc/CMakeTestsRepart.cmake +++ b/tools/test/misc/CMakeTestsRepart.cmake @@ -68,28 +68,40 @@ scd_family00001.h5 scd_family00002.h5 scd_family00003.h5 + family_to_single.h5 family_to_sec2.h5 ) - if (NOT "${last_test}" STREQUAL "") - set_tests_properties (H5REPART-clearall-objects PROPERTIES DEPENDS ${last_test}) - endif () - set (last_test "H5REPART-clearall-objects") + set_tests_properties (H5REPART-clearall-objects PROPERTIES FIXTURES_SETUP clear_testrepart) # repartition family member size to 20,000 bytes. add_test (NAME H5REPART-h5repart_20K COMMAND $<TARGET_FILE:h5repart> -m 20000 family_file%05d.h5 fst_family%05d.h5) - set_tests_properties (H5REPART-h5repart_20K PROPERTIES DEPENDS H5REPART-clearall-objects) + set_tests_properties (H5REPART-h5repart_20K PROPERTIES + FIXTURES_REQUIRED clear_testrepart + ) # repartition family member size to 5 KB. add_test (NAME H5REPART-h5repart_5K COMMAND $<TARGET_FILE:h5repart> -m 5k family_file%05d.h5 scd_family%05d.h5) - set_tests_properties (H5REPART-h5repart_5K PROPERTIES DEPENDS H5REPART-clearall-objects) + set_tests_properties (H5REPART-h5repart_5K PROPERTIES + FIXTURES_REQUIRED clear_testrepart + ) # convert family file to sec2 file of 20,000 bytes + add_test (NAME H5REPART-h5repart_single COMMAND $<TARGET_FILE:h5repart> -m 20000 -family_to_single family_file%05d.h5 family_to_single.h5) + set_tests_properties (H5REPART-h5repart_single PROPERTIES + FIXTURES_REQUIRED clear_testrepart + ) + + # convert family file to sec2 file of 20,000 bytes (old argument) add_test (NAME H5REPART-h5repart_sec2 COMMAND $<TARGET_FILE:h5repart> -m 20000 -family_to_sec2 family_file%05d.h5 family_to_sec2.h5) - set_tests_properties (H5REPART-h5repart_sec2 PROPERTIES DEPENDS H5REPART-clearall-objects) + set_tests_properties (H5REPART-h5repart_sec2 PROPERTIES + FIXTURES_REQUIRED clear_testrepart + ) # test the output files repartitioned above. add_test (NAME H5REPART-h5repart_test COMMAND $<TARGET_FILE:h5repart_test>) - set_tests_properties (H5REPART-h5repart_test PROPERTIES DEPENDS "H5REPART-clearall-objects;H5REPART-h5repart_20K;H5REPART-h5repart_5K;H5REPART-h5repart_sec2") + set_tests_properties (H5REPART-h5repart_test PROPERTIES + DEPENDS "H5REPART-h5repart_20K;H5REPART-h5repart_5K;H5REPART-h5repart_single;H5REPART-h5repart_sec2" + ) set (H5_DEP_EXECUTABLES ${H5_DEP_EXECUTABLES} h5repart_test diff --git a/tools/test/misc/Makefile.in b/tools/test/misc/Makefile.in index c5dbe09..c0f403c 100644 --- a/tools/test/misc/Makefile.in +++ b/tools/test/misc/Makefile.in @@ -613,7 +613,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -647,6 +646,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1602,7 +1602,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/misc/repart_test.c b/tools/test/misc/repart_test.c index 4016ee8..b8e0292 100644 --- a/tools/test/misc/repart_test.c +++ b/tools/test/misc/repart_test.c @@ -26,12 +26,13 @@ const char *FILENAME[] = { "fst_family%05d.h5", "scd_family%05d.h5", + "family_to_single.h5", "family_to_sec2.h5", NULL }; herr_t test_family_h5repart_opens(void); -herr_t test_sec2_h5repart_opens(void); +herr_t test_single_h5repart_opens(void); /*------------------------------------------------------------------------- @@ -90,23 +91,28 @@ error: /*------------------------------------------------------------------------- - * Function: test_sec2_h5repart_opens + * Function: test_single_h5repart_opens * - * Purpose: Tries to reopen a sec2 file. + * Purpose: Tries to reopen a single file. * * Return: SUCCEED/FAIL * *------------------------------------------------------------------------- */ herr_t -test_sec2_h5repart_opens(void) +test_single_h5repart_opens(void) { hid_t fid = -1; - /* open the sec2 file */ + /* open the single file */ if ((fid = H5Fopen(FILENAME[2], H5F_ACC_RDWR, H5P_DEFAULT)) < 0) goto error; + if (H5Fclose(fid) < 0) + goto error; + /* open the single file (created using the old argument) */ + if ((fid = H5Fopen(FILENAME[3], H5F_ACC_RDWR, H5P_DEFAULT)) < 0) + goto error; if (H5Fclose(fid) < 0) goto error; @@ -119,7 +125,7 @@ error: return FAIL; -} /* end test_sec2_h5repart_opens() */ +} /* end test_single_h5repart_opens() */ /*------------------------------------------------------------------------- @@ -137,7 +143,7 @@ main(void) int nerrors = 0; nerrors += test_family_h5repart_opens() < 0 ? 1 : 0; - nerrors += test_sec2_h5repart_opens() < 0 ? 1 : 0; + nerrors += test_single_h5repart_opens() < 0 ? 1 : 0; if (nerrors) goto error; @@ -150,3 +156,4 @@ error: nerrors, 1 == nerrors ? "" : "S"); HDexit(EXIT_FAILURE); } /* end main() */ + diff --git a/tools/test/misc/testfiles/h5clear_missing_file.ddl b/tools/test/misc/testfiles/h5clear_missing_file.ddl index 13eb2c9..32dd549 100644 --- a/tools/test/misc/testfiles/h5clear_missing_file.ddl +++ b/tools/test/misc/testfiles/h5clear_missing_file.ddl @@ -20,4 +20,3 @@ h5clear --increment file_name h5clear --increment=512 file_name Set the EOA to the maximum of (EOA, EOF) + 512 for the file <file_name>. -h5clear error: missing file name diff --git a/tools/test/misc/testfiles/h5clear_missing_file.err b/tools/test/misc/testfiles/h5clear_missing_file.err new file mode 100644 index 0000000..ea21b76 --- /dev/null +++ b/tools/test/misc/testfiles/h5clear_missing_file.err @@ -0,0 +1 @@ +h5clear error: missing file name diff --git a/tools/test/misc/testfiles/h5clear_no_mdc_image.ddl b/tools/test/misc/testfiles/h5clear_no_mdc_image.err index f5acd71..f5acd71 100644 --- a/tools/test/misc/testfiles/h5clear_no_mdc_image.ddl +++ b/tools/test/misc/testfiles/h5clear_no_mdc_image.err diff --git a/tools/test/misc/testfiles/h5clear_open_fail.ddl b/tools/test/misc/testfiles/h5clear_open_fail.err index 895ecd4..895ecd4 100644 --- a/tools/test/misc/testfiles/h5clear_open_fail.ddl +++ b/tools/test/misc/testfiles/h5clear_open_fail.err diff --git a/tools/test/misc/testh5clear.sh.in b/tools/test/misc/testh5clear.sh.in index 11c2ff9..3f2b32f 100644 --- a/tools/test/misc/testh5clear.sh.in +++ b/tools/test/misc/testh5clear.sh.in @@ -62,10 +62,10 @@ test -d $TESTDIR || mkdir -p $TESTDIR # copy test files and expected output files from source dirs to test dir # COPY_TESTFILES=" +$SRC_H5CLEAR_TESTFILES/h5clear_open_fail.err +$SRC_H5CLEAR_TESTFILES/h5clear_no_mdc_image.err $SRC_H5CLEAR_TESTFILES/h5clear_usage.ddl -$SRC_H5CLEAR_TESTFILES/h5clear_open_fail.ddl $SRC_H5CLEAR_TESTFILES/h5clear_missing_file.ddl -$SRC_H5CLEAR_TESTFILES/h5clear_no_mdc_image.ddl $SRC_H5CLEAR_TESTFILES/h5clear_status_noclose_after_size.ddl $SRC_H5CLEAR_TESTFILES/h5clear_noclose_before_size.ddl $SRC_H5CLEAR_TESTFILES/h5clear_noclose_after_size.ddl @@ -179,8 +179,9 @@ TOOLTEST_OUT() { expected=$5 # Prepare expected and actual output expect="$TESTDIR/$expected" + expect_err="$TESTDIR/`basename $expected .ddl`.err" actual="$TESTDIR/`basename $expected .ddl`.out" - actual_err="$TESTDIR/`basename $expected .ddl`.err" + actual_err="$TESTDIR/`basename $expected .ddl`.out.err" actual_sav=${actual}-sav actual_err_sav=${actual_err}-sav @@ -192,7 +193,6 @@ TOOLTEST_OUT() { ) >$actual 2>$actual_err cp $actual $actual_sav cp $actual_err $actual_err_sav - cat $actual_err >> $actual # Compare output COMPARE_OUT $expect $actual @@ -202,6 +202,38 @@ TOOLTEST_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } +# same as TOOLTEST_OUT just compare stderr +TOOLTEST_ERR() { + fname=$1 + option1=$2 + option2=$3 + option3=$4 + expected=$5 + # Prepare expected and actual output + expect_err="$TESTDIR/$expected" + expect="$TESTDIR/`basename $expected .err`.ddl" + actual="$TESTDIR/`basename $expected .err`.out" + actual_err="$TESTDIR/`basename $expected .err`.out.err" + actual_sav=${actual}-sav + actual_err_sav=${actual_err}-sav + + # Run test. + TESTING $H5CLEAR $option1 $option2 $option3 $option4 $fname + ( + cd $TESTDIR + $RUNSERIAL $H5CLEAR_BIN $option1 $option2 $option3 $option4 $fname + ) >$actual 2>$actual_err + cp $actual $actual_sav + cp $actual_err $actual_err_sav + + # Compare output + COMPARE_OUT $expect_err $actual_err + + # Clean up output file + if test -z "$HDF5_NOCLEANUP"; then + $RM $actual $actual_err $actual_sav $actual_err_sav + fi +} # $1 is the filename to open # $2 is the expected return from the open/check program @@ -274,11 +306,11 @@ TOOLTEST_OUT "" "" "" "" h5clear_usage.ddl TOOLTEST_OUT junk.h5 "" "" "" h5clear_usage.ddl TOOLTEST_OUT orig_h5clear_sec2_v3.h5 "" "" "" h5clear_usage.ddl TOOLTEST_OUT "" -m "" "" h5clear_missing_file.ddl -TOOLTEST_OUT junk.h5 -s "" "" h5clear_open_fail.ddl +TOOLTEST_ERR junk.h5 -s "" "" h5clear_open_fail.err TOOLTEST_OUT "" -m -s "" h5clear_missing_file.ddl -TOOLTEST_OUT junk.h5 -m -s "" h5clear_open_fail.ddl -TOOLTEST_OUT orig_h5clear_sec2_v2.h5 -m "" "" h5clear_no_mdc_image.ddl -TOOLTEST_OUT orig_h5clear_sec2_v0.h5 -s -m "" h5clear_no_mdc_image.ddl +TOOLTEST_ERR junk.h5 -m -s "" h5clear_open_fail.err +TOOLTEST_ERR orig_h5clear_sec2_v2.h5 -m "" "" h5clear_no_mdc_image.err +TOOLTEST_ERR orig_h5clear_sec2_v0.h5 -s -m "" h5clear_no_mdc_image.err # # # The following are tests to verify the expected exit code from h5clear: @@ -308,8 +340,8 @@ TOOLTEST h5clear_sec2_v0.h5 -l -m $FAIL # # # h5clear_mdc_image.h5 already has cache image removed earlier, verify the expected warning from h5clear: -TOOLTEST_OUT mod_h5clear_mdc_image.h5 -m "" "" h5clear_no_mdc_image.ddl -TOOLTEST_OUT mod_h5clear_mdc_image.h5 -s -m "" h5clear_no_mdc_image.ddl +TOOLTEST_ERR mod_h5clear_mdc_image.h5 -m "" "" h5clear_no_mdc_image.err +TOOLTEST_ERR mod_h5clear_mdc_image.h5 -s -m "" h5clear_no_mdc_image.err # # # @@ -342,16 +374,16 @@ OPEN_CHK h5clear_sec2_v2.h5 $SUCCEED # # # -# (1) h5clear_status_noclose.h5 +# (1) h5clear_status_noclose.h5 # "h5clear --filesize h5clear_status_noclose.h5" (unable to open the file because status_flag is on) -# "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) +# "h5clear -s --increment=0 h5clear_status_noclose.h5" (clear status_flag, EOA = MAX(EOA, EOF) + 0) # (no output, check exit code) # "h5clear --filesize h5clear_status_noclose_user.h5" (print EOA/EOF after the last action) -TOOLTEST_OUT h5clear_status_noclose.h5 --filesize "" "" h5clear_open_fail.ddl +TOOLTEST_ERR h5clear_status_noclose.h5 --filesize "" "" h5clear_open_fail.err TOOLTEST h5clear_status_noclose.h5 -s --increment=0 $SUCCEED TOOLTEST_OUT h5clear_status_noclose.h5 --filesize "" "" h5clear_status_noclose_after_size.ddl # -# (2) h5clear_fsm_persist_noclose.h5 +# (2) h5clear_fsm_persist_noclose.h5 # "h5clear --filesize h5clear_fsm_persist_noclose.h5" (print EOA/EOF before the next action) # "h5clear --increment=0 h5clear_fsm_persist_noclose.h5" (EOA = MAX(EOA, EOF)) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_noclose.h5" (print EOA/EOF after the last action) @@ -364,7 +396,7 @@ TOOLTEST_OUT h5clear_fsm_persist_noclose.h5 --filesize "" "" h5clear_noclose_aft # "h5clear --increment h5clear_fsm_persist_equal.h5" (EOA = MAX(EOA, EOF) + 1M) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_equal.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_before_size.ddl -TOOLTEST h5clear_fsm_persist_equal.h5 --increment "" $SUCCEED +TOOLTEST h5clear_fsm_persist_equal.h5 --increment "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_after_size.ddl # # (4) h5clear_fsm_persist_greater.h5 @@ -372,7 +404,7 @@ TOOLTEST_OUT h5clear_fsm_persist_equal.h5 --filesize "" "" h5clear_equal_after_s # "h5clear --increment=0 h5clear_fsm_persist_greater.h5" (EOA = MAX(EOA, EOF) + 0) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_greater.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_before_size.ddl -TOOLTEST h5clear_fsm_persist_greater.h5 --increment=0 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_greater.h5 --increment=0 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_after_size.ddl # # (5) h5clear_fsm_persist_less.h5 @@ -380,7 +412,7 @@ TOOLTEST_OUT h5clear_fsm_persist_greater.h5 --filesize "" "" h5clear_greater_aft # "h5clear --increment=200 h5clear_fsm_persist_less.h5" (EOA = MAX(EOA, EOF) + 200) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_less.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_before_size.ddl -TOOLTEST h5clear_fsm_persist_less.h5 --increment=200 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_less.h5 --increment=200 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_after_size.ddl # # (6) h5clear_fsm_persist_user_equal.h5 @@ -388,7 +420,7 @@ TOOLTEST_OUT h5clear_fsm_persist_less.h5 --filesize "" "" h5clear_less_after_siz # "h5clear --increment h5clear_fsm_persist_user_equal.h5" (EOA = MAX(EOA, EOF) + 1M) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_equal.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equal_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_equal.h5 --increment "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_equal.h5 --increment "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equal_after_size.ddl # # (7) h5clear_fsm_persist_user_greater.h5 @@ -396,7 +428,7 @@ TOOLTEST_OUT h5clear_fsm_persist_user_equal.h5 --filesize "" "" h5clear_user_equ # "h5clear --increment=0 h5clear_fsm_persist_user_greater.h5" (EOA = MAX(EOA, EOF) + 0) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_greater.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_greater_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_greater.h5 --increment=0 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_greater.h5 --increment=0 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_greater_after_size.ddl # # (8) h5clear_fsm_persist_user_less.h5 @@ -404,7 +436,7 @@ TOOLTEST_OUT h5clear_fsm_persist_user_greater.h5 --filesize "" "" h5clear_user_g # "h5clear --increment=200 h5clear_fsm_persist_user_less.h5" (EOA = MAX(EOA, EOF) + 200) (no output, check exit code) # "h5clear --filesize h5clear_fsm_persist_user_less.h5" (print EOA/EOF after the last action) TOOLTEST_OUT h5clear_fsm_persist_user_less.h5 --filesize "" "" h5clear_user_less_before_size.ddl -TOOLTEST h5clear_fsm_persist_user_less.h5 --increment=200 "" $SUCCEED +TOOLTEST h5clear_fsm_persist_user_less.h5 --increment=200 "" $SUCCEED TOOLTEST_OUT h5clear_fsm_persist_user_less.h5 --filesize "" "" h5clear_user_less_after_size.ddl # # diff --git a/tools/test/misc/testh5repart.sh.in b/tools/test/misc/testh5repart.sh.in index 594d37e..143f607 100644 --- a/tools/test/misc/testh5repart.sh.in +++ b/tools/test/misc/testh5repart.sh.in @@ -171,7 +171,9 @@ COPY_TESTFILES_TO_TESTDIR TOOLTEST -m 20000 family_file%05d.h5 fst_family%05d.h5 # repartition family member size to 5 KB. TOOLTEST -m 5k family_file%05d.h5 scd_family%05d.h5 -# convert family file to sec2 file of 20,000 bytes +# convert family file to single file of 20,000 bytes +TOOLTEST -m 20000 -family_to_single family_file%05d.h5 family_to_single.h5 +# convert family file to single file of 20,000 bytes (old argument) TOOLTEST -m 20000 -family_to_sec2 family_file%05d.h5 family_to_sec2.h5 # test the output files repartitioned above. @@ -183,7 +185,7 @@ CLEAN_TESTFILES_AND_TESTDIR if test -z "$HDF5_NOCLEANUP"; then cd $actual_dir - rm -f fst_family*.h5 scd_family*.h5 family_to_sec2.h5 + rm -f fst_family*.h5 scd_family*.h5 family_to_single.h5 family_to_sec2.h5 fi if test $nerrors -eq 0 ; then diff --git a/tools/test/misc/vds/Makefile.in b/tools/test/misc/vds/Makefile.in index 56333bc..90970d8 100644 --- a/tools/test/misc/vds/Makefile.in +++ b/tools/test/misc/vds/Makefile.in @@ -570,7 +570,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -604,6 +603,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1483,7 +1483,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/perform/CMakeTests.cmake b/tools/test/perform/CMakeTests.cmake index 450667a..36172d1 100644 --- a/tools/test/perform/CMakeTests.cmake +++ b/tools/test/perform/CMakeTests.cmake @@ -66,7 +66,7 @@ else () -P "${HDF_RESOURCES_EXT_DIR}/runTest.cmake" ) endif () -set_tests_properties (PERFORM_h5perf_serial PROPERTIES TIMEOUT 1800) +set_tests_properties (PERFORM_h5perf_serial PROPERTIES TIMEOUT ${CTEST_VERY_LONG_TIMEOUT}) set_tests_properties (PERFORM_h5perf_serial PROPERTIES DEPENDS "PERFORM_h5perform-clearall-objects") if (HDF5_BUILD_PERFORM_STANDALONE) @@ -170,9 +170,9 @@ endif () set_tests_properties (PERFORM_zip_perf PROPERTIES DEPENDS "PERFORM_zip_perf_help;PERFORM_h5perform-clearall-objects") if (H5_HAVE_PARALLEL) - add_test (NAME PERFORM_h5perf COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:h5perf> ${MPIEXEC_POSTFLAGS}) + add_test (NAME MPI_TEST_PERFORM_h5perf COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:h5perf> ${MPIEXEC_POSTFLAGS}) if (HDF5_BUILD_PERFORM_STANDALONE) - add_test (NAME PERFORM_h5perf_alone COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:h5perf_alone> ${MPIEXEC_POSTFLAGS}) + add_test (NAME MPI_TEST_PERFORM_h5perf_alone COMMAND ${MPIEXEC_EXECUTABLE} ${MPIEXEC_NUMPROC_FLAG} ${MPIEXEC_MAX_NUMPROCS} ${MPIEXEC_PREFLAGS} $<TARGET_FILE:h5perf_alone> ${MPIEXEC_POSTFLAGS}) endif () endif () diff --git a/tools/test/perform/Makefile.in b/tools/test/perform/Makefile.in index fa50dc6..b94f309 100644 --- a/tools/test/perform/Makefile.in +++ b/tools/test/perform/Makefile.in @@ -592,7 +592,6 @@ MAINT = @MAINT@ MAKEINFO = @MAKEINFO@ MANIFEST_TOOL = @MANIFEST_TOOL@ MEMORYALLOCSANITYCHECK = @MEMORYALLOCSANITYCHECK@ -METADATATRACEFILE = @METADATATRACEFILE@ MKDIR_P = @MKDIR_P@ MPE = @MPE@ NM = @NM@ @@ -626,6 +625,7 @@ PAC_FORTRAN_NUM_INTEGER_KINDS = @PAC_FORTRAN_NUM_INTEGER_KINDS@ PARALLEL = @PARALLEL@ PARALLEL_FILTERED_WRITES = @PARALLEL_FILTERED_WRITES@ PATH_SEPARATOR = @PATH_SEPARATOR@ +PREADWRITE = @PREADWRITE@ PROFILING = @PROFILING@ RANLIB = @RANLIB@ ROOT = @ROOT@ @@ -1608,7 +1608,7 @@ build-check-p: $(LIB) $(PROGS) $(chk_TESTS) echo "**** Hint ****"; \ echo "Parallel test files reside in the current directory" \ "by default."; \ - echo "Set HDF5_PARAPREFIX to use another directory. E.g.,"; \ + echo "Set HDF5_PARAPREFIX to use another directory. e.g.,"; \ echo " HDF5_PARAPREFIX=/PFS/user/me"; \ echo " export HDF5_PARAPREFIX"; \ echo " make check"; \ diff --git a/tools/test/perform/zip_perf.c b/tools/test/perform/zip_perf.c index 0636d3b..e301bb3 100644 --- a/tools/test/perform/zip_perf.c +++ b/tools/test/perform/zip_perf.c @@ -419,7 +419,9 @@ fill_with_random_data(Bytef *src, uLongf src_len) buf += rc; len -= (size_t)rc; } - } else { + HDclose(fd); + } + else { HDfprintf(stdout, "Using random() for random data\n"); for (u = 0; u < src_len; ++u) @@ -557,7 +559,7 @@ main(int argc, char **argv) int opt; prog = argv[0]; - + /* Initialize h5tools lib */ h5tools_init(); |