diff options
Diffstat (limited to 'tools')
-rw-r--r-- | tools/h5diff/h5diffgentest.c | 56 | ||||
-rw-r--r-- | tools/h5dump/h5dump_ddl.c | 8 | ||||
-rw-r--r-- | tools/h5dump/h5dump_xml.c | 83 | ||||
-rw-r--r-- | tools/h5dump/h5dump_xml.h | 82 | ||||
-rw-r--r-- | tools/lib/h5tools_dump.c | 2 | ||||
-rw-r--r-- | tools/lib/h5tools_dump.h | 2 | ||||
-rw-r--r-- | tools/lib/h5trav.c | 48 |
7 files changed, 145 insertions, 136 deletions
diff --git a/tools/h5diff/h5diffgentest.c b/tools/h5diff/h5diffgentest.c index e3851e4..02a76ca 100644 --- a/tools/h5diff/h5diffgentest.c +++ b/tools/h5diff/h5diffgentest.c @@ -572,10 +572,10 @@ int test_basic(const char *fname1, const char *fname2, const char *fname3) int data4[3][2] = {{0,0},{0,0},{0,0}}; int data5[2][2] = {{0,0},{0,0}}; unsigned int data6[3][2] = {{0,0},{0,0},{0,0}}; - cmp1_t data7[1] = {{1,2}}; - cmp2_t data8[1] = {{1,2}}; - hsize_t dims3[2] = { 2,2 }; - hsize_t dims4[1] = { 1 }; + cmp1_t data7[1] = {{1.0f, 2}}; + cmp2_t data8[1] = {{1, 2.0f}}; + hsize_t dims3[2] = {2, 2}; + hsize_t dims4[1] = {1}; size_t type_size; hid_t tid; @@ -4520,6 +4520,7 @@ static void test_comps_array (const char *fname, const char *dset, const char *a * Create an attribute in root group */ tid_attr = H5Acreate2(fid, attr, tid_cmpd1, sid_dset, H5P_DEFAULT, H5P_DEFAULT); + assert(tid_attr > 0); ret = H5Awrite(tid_attr, tid_cmpd1, wdata); assert(ret >= 0); @@ -4562,6 +4563,7 @@ static void test_comps_vlen (const char * fname, const char *dset, const char *a hid_t fid; /* HDF5 File ID */ hid_t did_dset; /* dataset ID */ hid_t sid_dset; /* dataset space ID */ + hid_t tid_attr; hid_t tid_cmpd2; /* compound2 type ID */ hid_t tid_cmpd1; /* compound1 type ID */ hid_t tid_cmpd1_vlen; @@ -4626,22 +4628,22 @@ static void test_comps_vlen (const char * fname, const char *dset, const char *a ret = H5Dwrite(did_dset, tid_cmpd1, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata); assert(ret >= 0); - /* Reclaim the write VL data */ - ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); - assert(ret >= 0); - /*----------------------------------- * Create an attribute in root group */ - /* TODO: creating vlen with compound type doesn't work for attribute now. - * so add this later when it's fixed tid_attr = H5Acreate2(fid, attr, tid_cmpd1, sid_dset, H5P_DEFAULT, H5P_DEFAULT); + assert(tid_attr > 0); ret = H5Awrite(tid_attr, tid_cmpd1, wdata); assert(ret >= 0); - */ + + /* Reclaim the write VL data */ + ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); + assert(ret >= 0); /* ---------------- * Close IDs */ + ret = H5Aclose(tid_attr); + assert(ret >= 0); ret = H5Dclose(did_dset); assert(ret >= 0); ret = H5Tclose(tid_cmpd2); @@ -4678,6 +4680,7 @@ static void test_comps_array_vlen (const char * fname, const char *dset,const ch hid_t fid; /* HDF5 File IDs */ hid_t did_dset; /* Dataset ID */ hid_t sid_dset; /* Dataspace ID */ + hid_t tid_attr; hid_t tid_cmpd1; /* Compound1 Datatype ID */ hid_t tid_arry1; /* Array Datatype ID */ hid_t tid_cmpd2; /* Compound2 Datatype ID */ @@ -4765,22 +4768,22 @@ static void test_comps_array_vlen (const char * fname, const char *dset,const ch ret = H5Dwrite(did_dset, tid_cmpd1, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata); assert(ret >= 0); - /* Reclaim the write VL data */ - ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); - assert(ret >= 0); - /*----------------------------------- * Create an attribute in root group */ - /* TODO: creating vlen with compound type doesn't work for attribute now. - * so add this later when it's fixed tid_attr = H5Acreate2(fid, attr, tid_cmpd1, sid_dset, H5P_DEFAULT, H5P_DEFAULT); + assert(tid_attr > 0); ret = H5Awrite(tid_attr, tid_cmpd1, wdata); assert(ret >= 0); - */ + + /* Reclaim the write VL data */ + ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); + assert(ret >= 0); /*------------------- * Close IDs */ + ret = H5Aclose(tid_attr); + assert(ret >= 0); ret = H5Tclose(tid_arry1); assert(ret >= 0); ret = H5Dclose(did_dset); @@ -4825,6 +4828,7 @@ static void test_comps_vlen_arry (const char * fname, const char *dset, const ch hid_t fid; /* HDF5 File ID */ hid_t did_dset; /* dataset ID */ hid_t sid_dset; /* dataset space ID */ + hid_t tid_attr; hid_t tid_cmpd3; /* compound3 type ID */ hid_t tid_cmpd2; /* compound2 type ID */ hid_t tid_cmpd2_arry; @@ -4910,22 +4914,22 @@ static void test_comps_vlen_arry (const char * fname, const char *dset, const ch ret = H5Dwrite(did_dset, tid_cmpd1, H5S_ALL, H5S_ALL, H5P_DEFAULT, wdata); assert(ret >= 0); - /* Reclaim the write VL data */ - ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); - assert(ret >= 0); - /*----------------------------------- * Create an attribute in root group */ - /* TODO: creating vlen with compound type doesn't work for attribute now. - * so add this later when it's fixed tid_attr = H5Acreate2(fid, attr, tid_cmpd1, sid_dset, H5P_DEFAULT, H5P_DEFAULT); + assert(tid_attr > 0); ret = H5Awrite(tid_attr, tid_cmpd1, wdata); assert(ret >= 0); - */ + + /* Reclaim the write VL data */ + ret = H5Dvlen_reclaim(tid_cmpd1, sid_dset, H5P_DEFAULT, wdata); + assert(ret >= 0); /* ---------------- * Close IDs */ + ret = H5Aclose(tid_attr); + assert(ret >= 0); ret = H5Dclose(did_dset); assert(ret >= 0); ret = H5Sclose(sid_dset); @@ -4971,7 +4975,7 @@ static void test_data_nocomparables (const char * fname, int make_diffs) int data1[DIM_ARRY] = {0,0,0}; int data2[DIM_ARRY] = {1,1,1}; int data3[DIM_ARRY+1] = {1,1,1,1}; - int data1_dim2[DIM_ARRY][1] = {{0,0,0}}; + int data1_dim2[DIM_ARRY][1] = {0,0,0}; int rank_attr; char data1_str[DIM_ARRY][STR_SIZE]= {"ab","cd","ef"}; herr_t status = SUCCEED; diff --git a/tools/h5dump/h5dump_ddl.c b/tools/h5dump/h5dump_ddl.c index ec93778..380eb8e 100644 --- a/tools/h5dump/h5dump_ddl.c +++ b/tools/h5dump/h5dump_ddl.c @@ -148,7 +148,7 @@ dump_attr_cb(hid_t oid, const char *attr_name, const H5A_info_t UNUSED *info, vo outputformat = &string_dataformat; h5dump_type_table = type_table; - h5tools_dump_attribute(rawoutstream, outputformat, &ctx, oid, attr_name, attr_id, display_ai, display_char); + h5tools_dump_attribute(rawoutstream, outputformat, &ctx, attr_name, attr_id, display_ai, display_char); h5dump_type_table = NULL; if(attr_id < 0) { @@ -1360,7 +1360,7 @@ attr_search(hid_t oid, const char *attr_name, const H5A_info_t UNUSED *ainfo, vo } /* end attr_search() */ static herr_t -obj_search(const char *path, const H5O_info_t *oi, const char *already_visited, void *_op_data) +obj_search(const char *path, const H5O_info_t *oi, const char UNUSED *already_visited, void *_op_data) { trav_handle_udata_t *handle_data = (trav_handle_udata_t*)_op_data; char *op_name = (char*)handle_data->op_name; @@ -1452,7 +1452,7 @@ lnk_search(const char *path, const H5L_info_t *li, void *_op_data) *------------------------------------------------------------------------- */ void -handle_paths(hid_t fid, const char *path_name, void* data, int pe, const char *display_name) +handle_paths(hid_t fid, const char *path_name, void UNUSED * data, int UNUSED pe, const char UNUSED *display_name) { hid_t gid = -1; @@ -1613,7 +1613,7 @@ handle_attributes(hid_t fid, const char *attr, void UNUSED * data, int UNUSED pe attr_data_output = display_attr_data; h5dump_type_table = type_table; - h5tools_dump_attribute(rawoutstream, outputformat, &ctx, oid, attr_name, attr_id, display_ai, display_char); + h5tools_dump_attribute(rawoutstream, outputformat, &ctx, attr_name, attr_id, display_ai, display_char); h5dump_type_table = NULL; if(attr_id < 0) { diff --git a/tools/h5dump/h5dump_xml.c b/tools/h5dump/h5dump_xml.c index 53ad894..d80c6c2 100644 --- a/tools/h5dump/h5dump_xml.c +++ b/tools/h5dump/h5dump_xml.c @@ -26,6 +26,89 @@ const char *xmlnsprefix="hdf5:"; +/* + * Alternative formating for data dumped to XML + * In general, the numbers are the same, but separators + * except spaces are not used. + * + * Some of these are not used, as some kinds of data are + * dumped in completely new subroutines. + * + * Some of this formatting may yet need to change. + * + * This table only affects XML output. + */ +static h5tool_format_t xml_dataformat = { + 0, /*raw */ + + "", /*fmt_raw */ + "%d", /*fmt_int */ + "%u", /*fmt_uint */ + "%hhd", /*fmt_schar */ + "%u", /*fmt_uchar */ + "%d", /*fmt_short */ + "%u", /*fmt_ushort */ + "%ld", /*fmt_long */ + "%lu", /*fmt_ulong */ + NULL, /*fmt_llong */ + NULL, /*fmt_ullong */ + "%g", /*fmt_double */ + "%g", /*fmt_float */ + + 0, /*ascii */ + 0, /*str_locale */ + 0, /*str_repeat */ + + "", /*arr_pre */ + "", /*arr_sep */ + "", /*arr_suf */ + 1, /*arr_linebreak */ + + "", /*cmpd_name */ + "", /*cmpd_sep */ + "", /*cmpd_pre */ + "", /*cmpd_suf */ + "", /*cmpd_end */ + "", /*cmpd_listv */ + + " ", /*vlen_sep */ + " ", /*vlen_pre */ + "", /*vlen_suf */ + "", /*vlen_end */ + + "%s", /*elmt_fmt */ + "", /*elmt_suf1 */ + " ", /*elmt_suf2 */ + + "", /*idx_n_fmt */ + "", /*idx_sep */ + "", /*idx_fmt */ + + 80, /*line_ncols *//*standard default columns */ + 0, /*line_per_line */ + "", /*line_pre */ + "%s", /*line_1st */ + "%s", /*line_cont */ + "", /*line_suf */ + "", /*line_sep */ + 1, /*line_multi_new */ + " ", /*line_indent */ + + 1, /*skip_first */ + + 1, /*obj_hidefileno */ + " "H5_PRINTF_HADDR_FMT, /*obj_format */ + + 1, /*dset_hidefileno */ + "DATASET %s ", /*dset_format */ + "%s", /*dset_blockformat_pre */ + "%s", /*dset_ptformat_pre */ + "%s", /*dset_ptformat */ + 0, /*array indices */ + 0 /*escape non printable characters */ +}; + + /* internal functions */ static int xml_name_to_XID(const char *, char *, int , int ); diff --git a/tools/h5dump/h5dump_xml.h b/tools/h5dump/h5dump_xml.h index d4c8365..c1d6c62 100644 --- a/tools/h5dump/h5dump_xml.h +++ b/tools/h5dump/h5dump_xml.h @@ -17,88 +17,6 @@ extern const char *xmlnsprefix; -/* - * Alternative formating for data dumped to XML - * In general, the numbers are the same, but separators - * except spaces are not used. - * - * Some of these are not used, as some kinds of data are - * dumped in completely new subroutines. - * - * Some of this formatting may yet need to change. - * - * This table only affects XML output. - */ -static h5tool_format_t xml_dataformat = { - 0, /*raw */ - - "", /*fmt_raw */ - "%d", /*fmt_int */ - "%u", /*fmt_uint */ - "%hhd", /*fmt_schar */ - "%u", /*fmt_uchar */ - "%d", /*fmt_short */ - "%u", /*fmt_ushort */ - "%ld", /*fmt_long */ - "%lu", /*fmt_ulong */ - NULL, /*fmt_llong */ - NULL, /*fmt_ullong */ - "%g", /*fmt_double */ - "%g", /*fmt_float */ - - 0, /*ascii */ - 0, /*str_locale */ - 0, /*str_repeat */ - - "", /*arr_pre */ - "", /*arr_sep */ - "", /*arr_suf */ - 1, /*arr_linebreak */ - - "", /*cmpd_name */ - "", /*cmpd_sep */ - "", /*cmpd_pre */ - "", /*cmpd_suf */ - "", /*cmpd_end */ - "", /*cmpd_listv */ - - " ", /*vlen_sep */ - " ", /*vlen_pre */ - "", /*vlen_suf */ - "", /*vlen_end */ - - "%s", /*elmt_fmt */ - "", /*elmt_suf1 */ - " ", /*elmt_suf2 */ - - "", /*idx_n_fmt */ - "", /*idx_sep */ - "", /*idx_fmt */ - - 80, /*line_ncols *//*standard default columns */ - 0, /*line_per_line */ - "", /*line_pre */ - "%s", /*line_1st */ - "%s", /*line_cont */ - "", /*line_suf */ - "", /*line_sep */ - 1, /*line_multi_new */ - " ", /*line_indent */ - - 1, /*skip_first */ - - 1, /*obj_hidefileno */ - " "H5_PRINTF_HADDR_FMT, /*obj_format */ - - 1, /*dset_hidefileno */ - "DATASET %s ", /*dset_format */ - "%s", /*dset_blockformat_pre */ - "%s", /*dset_ptformat_pre */ - "%s", /*dset_ptformat */ - 0, /*array indices */ - 0 /*escape non printable characters */ -}; - #ifdef __cplusplus extern "C" { #endif diff --git a/tools/lib/h5tools_dump.c b/tools/lib/h5tools_dump.c index f3a9771..fb820ad 100644 --- a/tools/lib/h5tools_dump.c +++ b/tools/lib/h5tools_dump.c @@ -3501,7 +3501,7 @@ h5tools_dump_comment(FILE *stream, const h5tool_format_t *info, */ void h5tools_dump_attribute(FILE *stream, const h5tool_format_t *info, - h5tools_context_t *ctx, hid_t oid, const char *attr_name, hid_t attr_id, + h5tools_context_t *ctx, const char *attr_name, hid_t attr_id, int display_index, int display_char) { h5tools_str_t buffer; /* string into which to render */ diff --git a/tools/lib/h5tools_dump.h b/tools/lib/h5tools_dump.h index 86f9f99..061a3db 100644 --- a/tools/lib/h5tools_dump.h +++ b/tools/lib/h5tools_dump.h @@ -52,7 +52,7 @@ H5TOOLS_DLL void h5tools_dump_datatype(FILE *stream, const h5tool_format_t *i H5TOOLS_DLL void h5tools_dump_dataspace(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx/*in,out*/, hid_t space); H5TOOLS_DLL void h5tools_dump_attribute(FILE *stream, const h5tool_format_t *info, - h5tools_context_t *ctx/*in,out*/, hid_t oid, const char *attr_name, + h5tools_context_t *ctx/*in,out*/, const char *attr_name, hid_t attr_id, int display_index, int display_char); H5TOOLS_DLL void h5tools_dump_oid(FILE *stream, const h5tool_format_t *info, h5tools_context_t *ctx/*in,out*/, hid_t oid); diff --git a/tools/lib/h5trav.c b/tools/lib/h5trav.c index 8455360..58d7959 100644 --- a/tools/lib/h5trav.c +++ b/tools/lib/h5trav.c @@ -724,22 +724,22 @@ trav_table_add(trav_table_t *table, const char *path, const H5O_info_t *oinfo) { - size_t new; + size_t new_obj; if(table->nobjs == table->size) { table->size = MAX(1, table->size * 2); table->objs = (trav_obj_t*)HDrealloc(table->objs, table->size * sizeof(trav_obj_t)); } /* end if */ - new = table->nobjs++; - table->objs[new].objno = oinfo ? oinfo->addr : HADDR_UNDEF; - table->objs[new].flags[0] = table->objs[new].flags[1] = 0; - table->objs[new].is_same_trgobj = 0; - table->objs[new].name = (char *)HDstrdup(path); - table->objs[new].type = oinfo ? (h5trav_type_t)oinfo->type : H5TRAV_TYPE_LINK; - table->objs[new].nlinks = 0; - table->objs[new].sizelinks = 0; - table->objs[new].links = NULL; + new_obj = table->nobjs++; + table->objs[new_obj].objno = oinfo ? oinfo->addr : HADDR_UNDEF; + table->objs[new_obj].flags[0] = table->objs[new_obj].flags[1] = 0; + table->objs[new_obj].is_same_trgobj = 0; + table->objs[new_obj].name = (char *)HDstrdup(path); + table->objs[new_obj].type = oinfo ? (h5trav_type_t)oinfo->type : H5TRAV_TYPE_LINK; + table->objs[new_obj].nlinks = 0; + table->objs[new_obj].sizelinks = 0; + table->objs[new_obj].links = NULL; } /*------------------------------------------------------------------------- @@ -807,23 +807,23 @@ void trav_table_addflags(unsigned *flags, h5trav_type_t type, trav_table_t *table) { - unsigned int new; + unsigned int new_obj; if(table->nobjs == table->size) { table->size = MAX(1, table->size * 2); table->objs = (trav_obj_t *)HDrealloc(table->objs, table->size * sizeof(trav_obj_t)); } /* end if */ - new = table->nobjs++; - table->objs[new].objno = 0; - table->objs[new].flags[0] = flags[0]; - table->objs[new].flags[1] = flags[1]; - table->objs[new].is_same_trgobj = 0; - table->objs[new].name = (char *)HDstrdup(name); - table->objs[new].type = type; - table->objs[new].nlinks = 0; - table->objs[new].sizelinks = 0; - table->objs[new].links = NULL; + new_obj = table->nobjs++; + table->objs[new_obj].objno = 0; + table->objs[new_obj].flags[0] = flags[0]; + table->objs[new_obj].flags[1] = flags[1]; + table->objs[new_obj].is_same_trgobj = 0; + table->objs[new_obj].name = (char *)HDstrdup(name); + table->objs[new_obj].type = type; + table->objs[new_obj].nlinks = 0; + table->objs[new_obj].sizelinks = 0; + table->objs[new_obj].links = NULL; } @@ -890,7 +890,11 @@ void trav_table_free( trav_table_t *table ) } static herr_t -trav_attr(hid_t obj, const char *attr_name, const H5A_info_t UNUSED *ainfo, void *op_data) +trav_attr(hid_t +#ifndef H5TRAV_PRINT_SPACE +UNUSED +#endif /* H5TRAV_PRINT_SPACE */ +obj, const char *attr_name, const H5A_info_t UNUSED *ainfo, void *op_data) { char *buf; |