diff options
Diffstat (limited to 'tools')
38 files changed, 104 insertions, 104 deletions
diff --git a/tools/lib/h5diff.c b/tools/lib/h5diff.c index 0ad319e..2275c72 100644 --- a/tools/lib/h5diff.c +++ b/tools/lib/h5diff.c @@ -1228,7 +1228,7 @@ diff_match(hid_t file1_id, const char *grp1, trav_info_t *info1, hid_t file2_id, H5TOOLS_DEBUG("Beginning of big else block"); /* We're in parallel mode */ /* Since the data type of diff value is hsize_t which can - * be arbitary large such that there is no MPI type that + * be arbitrary large such that there is no MPI type that * matches it, the value is passed between processes as * an array of bytes in order to be portable. But this * may not work in non-homogeneous MPI environments. diff --git a/tools/src/h5dump/h5dump_ddl.c b/tools/src/h5dump/h5dump_ddl.c index bb495f2..868b75d 100644 --- a/tools/src/h5dump/h5dump_ddl.c +++ b/tools/src/h5dump/h5dump_ddl.c @@ -1959,7 +1959,7 @@ handle_datatypes(hid_t fid, const char *type, void H5_ATTR_UNUSED *data, int pe, const char *real_name = display_name ? display_name : type; if ((type_id = H5Topen2(fid, type, H5P_DEFAULT)) < 0) { - /* check if type is unamed datatype */ + /* check if type is unnamed datatype */ unsigned idx = 0; while (idx < type_table->nobjs) { diff --git a/tools/src/h5dump/h5dump_xml.c b/tools/src/h5dump/h5dump_xml.c index ccf4156..5f64d6c 100644 --- a/tools/src/h5dump/h5dump_xml.c +++ b/tools/src/h5dump/h5dump_xml.c @@ -23,7 +23,7 @@ const char *xmlnsprefix = "hdf5:"; /* - * Alternative formating for data dumped to XML + * Alternative formatting for data dumped to XML * In general, the numbers are the same, but separators * except spaces are not used. * @@ -2795,7 +2795,7 @@ xml_dump_group(hid_t gid, const char *name) if (isRoot && unamedtype) { unsigned u; - /* Very special case: dump unamed type in root group */ + /* Very special case: dump unnamed type in root group */ for (u = 0; u < type_table->nobjs; u++) { if (!type_table->objs[u].recorded) { char *obj_tok_str = NULL; @@ -2888,7 +2888,7 @@ xml_dump_group(hid_t gid, const char *name) if (isRoot && unamedtype) { unsigned u; - /* Very special case: dump unamed type in root group */ + /* Very special case: dump unnamed type in root group */ for (u = 0; u < type_table->nobjs; u++) { if (!type_table->objs[u].recorded) { char *obj_tok_str = NULL; @@ -2940,7 +2940,7 @@ xml_dump_group(hid_t gid, const char *name) /*------------------------------------------------------------------------- * Function: xml_print_refs * - * Purpose: Print a path to the objects referenced by HDF5 Referneces. + * Purpose: Print a path to the objects referenced by HDF5 References. * * Return: void * diff --git a/tools/src/h5import/h5import.c b/tools/src/h5import/h5import.c index ddd34ce..317db81 100644 --- a/tools/src/h5import/h5import.c +++ b/tools/src/h5import/h5import.c @@ -3725,7 +3725,7 @@ getCompressionParameter(struct Input *in, FILE *strm) int ival; const char *err1 = "Unable to get integer value.\n"; - const char *err2 = "Invalid value for compression paramter.\n"; + const char *err2 = "Invalid value for compression parameter.\n"; const char *err3 = "Unsupported Compression Type.\n"; switch (in->compressionType) { diff --git a/tools/src/h5perf/pio_engine.c b/tools/src/h5perf/pio_engine.c index e35f86e..90d63c8 100644 --- a/tools/src/h5perf/pio_engine.c +++ b/tools/src/h5perf/pio_engine.c @@ -246,7 +246,7 @@ do_pio(parameters param) if (((size_t)(snbytes / pio_mpi_nprocs_g) % buf_size) != 0) { HDfprintf(stderr, "Dataset size/process (%" H5_PRINTF_LL_WIDTH "d) must be a multiple of the " - "trasfer buffer size (%zu)\n", + "transfer buffer size (%zu)\n", (long long)(snbytes / pio_mpi_nprocs_g), buf_size); GOTOERROR(FAIL); } @@ -255,7 +255,7 @@ do_pio(parameters param) if (((size_t)snbytes % buf_size) != 0) { HDfprintf(stderr, "Dataset side size (%" H5_PRINTF_LL_WIDTH "d) must be a multiple of the " - "trasfer buffer size (%zu)\n", + "transfer buffer size (%zu)\n", (long long)snbytes, buf_size); GOTOERROR(FAIL); } diff --git a/tools/src/h5perf/sio_engine.c b/tools/src/h5perf/sio_engine.c index dc2c68e..dda5bd2 100644 --- a/tools/src/h5perf/sio_engine.c +++ b/tools/src/h5perf/sio_engine.c @@ -181,7 +181,7 @@ do_sio(parameters param, results *res) if ((param.dset_size[i] % param.buf_size[i]) != 0) { HDfprintf(stderr, "Dataset size[%d] (%" H5_PRINTF_LL_WIDTH "d) must be a multiple of the " - "trasfer buffer size[%d] (%zu)\n", + "transfer buffer size[%d] (%zu)\n", param.rank, (long long)param.dset_size[i], param.rank, param.buf_size[i]); GOTOERROR(FAIL); } diff --git a/tools/src/h5perf/sio_perf.c b/tools/src/h5perf/sio_perf.c index b2dd765..f299c04 100644 --- a/tools/src/h5perf/sio_perf.c +++ b/tools/src/h5perf/sio_perf.c @@ -1278,7 +1278,7 @@ usage(const char *prog) HDprintf("\n"); HDprintf(" Example: 2K,2K,3K\n"); HDprintf("\n"); - HDprintf(" The example defines an object (dataset, tranfer buffer) with three\n"); + HDprintf(" The example defines an object (dataset, transfer buffer) with three\n"); HDprintf(" dimensions. Be aware that as the number of dimensions increases, the\n"); HDprintf(" the total size of the object increases exponentially.\n"); HDprintf("\n"); diff --git a/tools/src/h5repack/h5repack.h b/tools/src/h5repack/h5repack.h index b242a71..65e5d40 100644 --- a/tools/src/h5repack/h5repack.h +++ b/tools/src/h5repack/h5repack.h @@ -124,7 +124,7 @@ typedef struct { int grp_compact; /* Set the maximum number of links to store as header messages in the group */ int grp_indexed; /* Set the minimum number of links to store in the indexed format */ int msg_size[8]; /* Minimum size of shared messages: dataspace, - datatype, fill value, filter pipleline, attribute */ + datatype, fill value, filter pipeline, attribute */ const char * ublock_filename; /* user block file name */ hsize_t ublock_size; /* user block size */ hsize_t meta_block_size; /* metadata aggregation block size (for H5Pset_meta_block_size) */ diff --git a/tools/src/h5repack/h5repack_copy.c b/tools/src/h5repack/h5repack_copy.c index 65843d4..772c3a7 100644 --- a/tools/src/h5repack/h5repack_copy.c +++ b/tools/src/h5repack/h5repack_copy.c @@ -67,7 +67,7 @@ copy_objects(const char *fnamein, const char *fnameout, pack_opt_t *options) hid_t fcpl = H5P_DEFAULT; /* file creation property list ID */ trav_table_t * travt = NULL; hsize_t ub_size = 0; /* size of user block */ - H5F_fspace_strategy_t set_strategy; /* Strategy to be set in outupt file */ + H5F_fspace_strategy_t set_strategy; /* Strategy to be set in output file */ hbool_t set_persist; /* Persist free-space status to be set in output file */ hsize_t set_threshold; /* Free-space section threshold to be set in output file */ hsize_t set_pagesize; /* File space page size to be set in output file */ @@ -188,7 +188,7 @@ copy_objects(const char *fnamein, const char *fnameout, pack_opt_t *options) H5TOOLS_GOTO_ERROR((-1), "H5Pset_shared_mesg_nindexes failed to set the number of shared " "object header message indexes"); - /* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipleline, 4=attribute */ + /* msg_size[0]=dataspace, 1=datatype, 2=file value, 3=filter pipeline, 4=attribute */ for (i = 0; i < (nindex - 1); i++) if (H5Pset_shared_mesg_index(fcpl, i, mesg_type_flags[i], min_mesg_sizes[i]) < 0) H5TOOLS_GOTO_ERROR((-1), "H5Pset_shared_mesg_index failed to configure the specified " @@ -402,18 +402,18 @@ done: /*------------------------------------------------------------------------- * Function: get_hyperslab * - * Purpose: Calulate a hyperslab from a dataset for higher performance. - * The size of hyperslab is limitted by H5TOOLS_BUFSIZE. - * Return the hyperslab dimentions and size in byte. + * Purpose: Calculate a hyperslab from a dataset for higher performance. + * The size of hyperslab is limited by H5TOOLS_BUFSIZE. + * Return the hyperslab dimensions and size in byte. * * Return: 0 - SUCCEED, -1 FAILED * * Parameters: * dcpl_id : [IN] dataset creation property. * rank_dset : [IN] dataset rank - * dims_dset[] : [IN] dataset dimentions + * dims_dset[] : [IN] dataset dimensions * size_datum : [IN] size of a data element in byte - * dims_hslab[] : [OUT] calculated hyperslab dimentions + * dims_hslab[] : [OUT] calculated hyperslab dimensions * * hslab_nbytes_p : [OUT] total byte of the hyperslab * * Update: @@ -428,7 +428,7 @@ done: * 3. If not chunked, each data element would be a unit of collection and * the boundary would be dataset's dims. * - * The calulation starts from the last dimention (h5dump dims output). + * The calculation starts from the last dimension (h5dump dims output). *-----------------------------------------*/ int @@ -442,8 +442,8 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si hsize_t size_chunk = 1; hsize_t nchunk_fit; /* number of chunks that fits in hyperslab buffer (H5TOOLS_BUFSIZE) */ hsize_t ndatum_fit; /* number of dataum that fits in hyperslab buffer (H5TOOLS_BUFSIZE) */ - hsize_t chunk_dims_map[H5S_MAX_RANK]; /* mapped chunk dimentions */ - hsize_t hs_dims_map[H5S_MAX_RANK]; /* mapped hyperslab dimentions */ + hsize_t chunk_dims_map[H5S_MAX_RANK]; /* mapped chunk dimensions */ + hsize_t hs_dims_map[H5S_MAX_RANK]; /* mapped hyperslab dimensions */ hsize_t hslab_nbytes; /* size of hyperslab in byte */ int ret_value = 0; @@ -468,18 +468,18 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si /* 1. if a chunk fit in hyperslab buffer */ if (nchunk_fit >= 1) { - /* Calulate a hyperslab that contains as many chunks that can fit + /* Calculate a hyperslab that contains as many chunks that can fit * in hyperslab buffer. Hyperslab will be increased starting from - * the last dimention of the dataset (see h5dump's dims output). + * the last dimension of the dataset (see h5dump's dims output). * The calculation boundary is dataset dims. * In the loop, used mapping from a datum to a chunk to figure out * chunk based hyperslab. */ for (k = rank_dset; k > 0; --k) { - /* map dataset dimentions with a chunk dims */ + /* map dataset dimensions with a chunk dims */ chunk_dims_map[k - 1] = dims_dset[k - 1] / dims_chunk[k - 1]; - /* if reminder exist, increse by 1 to cover partial edge chunks */ + /* if reminder exist, increase by 1 to cover partial edge chunks */ if (dims_dset[k - 1] % dims_chunk[k - 1] > 0) chunk_dims_map[k - 1]++; @@ -492,7 +492,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si if (nchunk_fit == 0) nchunk_fit = 1; - /* get hyperslab dimentions as unmapping to actual size */ + /* get hyperslab dimensions as unmapping to actual size */ dims_hslab[k - 1] = MIN((hs_dims_map[k - 1] * dims_chunk[k - 1]), dims_dset[k - 1]); /* calculate total size for the hyperslab */ @@ -501,9 +501,9 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si } /* 2. if a chunk is bigger than hyperslab buffer */ else { - /* Calulate a hyperslab that contains as many data elements that + /* Calculate a hyperslab that contains as many data elements that * can fit in hyperslab buffer. Hyperslab will be increased - * starting from the last dimention of the chunk (see h5dump's dims + * starting from the last dimension of the chunk (see h5dump's dims * output). * The calculation boundary is a chunk dims. */ @@ -513,7 +513,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si /* if a datum is bigger than rest of buffer */ if (ndatum_fit == 0) ndatum_fit = 1; - /* get hyperslab dimentions within a chunk boundary */ + /* get hyperslab dimensions within a chunk boundary */ dims_hslab[k - 1] = MIN(dims_chunk[k - 1], ndatum_fit); /* calculate total size for the hyperslab */ @@ -526,9 +526,9 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si } /* 3. if dataset is not chunked */ else { - /* Calulate a hyperslab that contains as many data elements that can + /* Calculate a hyperslab that contains as many data elements that can * fit in hyperslab buffer. Hyperslab will be increased starting from - * the last dimention of the dataset (see h5dump's dims output). + * the last dimension of the dataset (see h5dump's dims output). * The calculation boundary is dataset dims. */ for (k = rank_dset; k > 0; --k) { @@ -537,7 +537,7 @@ get_hyperslab(hid_t dcpl_id, int rank_dset, const hsize_t dims_dset[], size_t si /* if a datum is bigger than rest of buffer */ if (ndatum_fit == 0) ndatum_fit = 1; - /* get hyperslab dimentions within dataset boundary */ + /* get hyperslab dimensions within dataset boundary */ dims_hslab[k - 1] = MIN(dims_dset[k - 1], ndatum_fit); /* calculate total size for the hyperslab */ @@ -601,7 +601,7 @@ done: * in (2) is that, when using the strip mine size, it assures that the "remaining" part * of the dataset that does not fill an entire strip mine is processed. * - * 1. figure out a hyperslab (dimentions) and size (refer to get_hyperslab()). + * 1. figure out a hyperslab (dimensions) and size (refer to get_hyperslab()). * 2. Calculate the hyperslab selections as the selection is moving forward. * Selection would be same as the hyperslab except for the remaining edge portion * of the dataset. The code take care of the remaining portion if exist. @@ -1621,7 +1621,7 @@ copy_user_block(const char *infile, const char *outfile, hsize_t size) /* Copy the userblock from the input file to the output file */ while (size > 0) { - ssize_t nread, nbytes; /* # of bytes transfered, etc. */ + ssize_t nread, nbytes; /* # of bytes transferred, etc. */ char rbuf[USERBLOCK_XFER_SIZE]; /* Buffer for reading */ const char *wbuf; /* Pointer into buffer, for writing */ diff --git a/tools/src/h5repack/h5repack_filters.c b/tools/src/h5repack/h5repack_filters.c index 32476ce..76bac5e 100644 --- a/tools/src/h5repack/h5repack_filters.c +++ b/tools/src/h5repack/h5repack_filters.c @@ -231,7 +231,7 @@ aux_assign_obj(const char * name, /* object name from traverse list */ * do extra checking in the case of SZIP; delete all filters in the case * of H5Z_FILTER_NONE present in the PACK_INFO_T filter array * - * Return: 0 success, -1 an error occured + * Return: 0 success, -1 an error occurred *------------------------------------------------------------------------- */ @@ -258,7 +258,7 @@ apply_filters(const char * name, /* object name from traverse list */ H5TOOLS_GOTO_DONE(0); /*------------------------------------------------------------------------- - * initialize the assigment object + * initialize the assignment object *------------------------------------------------------------------------- */ init_packobject(&obj); diff --git a/tools/src/h5repack/h5repack_main.c b/tools/src/h5repack/h5repack_main.c index 98d2a73..87a83bc 100644 --- a/tools/src/h5repack/h5repack_main.c +++ b/tools/src/h5repack/h5repack_main.c @@ -39,13 +39,13 @@ static struct long_options l_opts[] = {{"alignment", require_arg, 'a'}, {"file", require_arg, 'e'}, {"filter", require_arg, 'f'}, {"help", no_arg, 'h'}, - {"infile", require_arg, 'i'}, /* for backward compability */ + {"infile", require_arg, 'i'}, /* for backward compatibility */ {"low", require_arg, 'j'}, {"high", require_arg, 'k'}, {"layout", require_arg, 'l'}, {"minimum", require_arg, 'm'}, {"native", no_arg, 'n'}, - {"outfile", require_arg, 'o'}, /* for backward compability */ + {"outfile", require_arg, 'o'}, /* for backward compatibility */ {"sort_by", require_arg, 'q'}, {"ssize", require_arg, 's'}, {"threshold", require_arg, 't'}, diff --git a/tools/src/h5repack/h5repack_refs.c b/tools/src/h5repack/h5repack_refs.c index 6d62e52..3259b89 100644 --- a/tools/src/h5repack/h5repack_refs.c +++ b/tools/src/h5repack/h5repack_refs.c @@ -539,7 +539,7 @@ copy_refs_attr(hid_t loc_in, hid_t loc_out, trav_table_t *travt, hid_t fidout) / } /* This line below needs to be moved in this loop instead of inserting outside. Otherwise, ref_comp_field_n may be >0 for the next attribute, which may not be - the reference type and will be accidently treated as the reference type. + the reference type and will be accidentally treated as the reference type. It will then cause the H5Acreate2 failed since that attribute is already created. KY 2020-02-07 */ diff --git a/tools/src/h5repack/h5repack_verify.c b/tools/src/h5repack/h5repack_verify.c index 0542d03..98883b2 100644 --- a/tools/src/h5repack/h5repack_verify.c +++ b/tools/src/h5repack/h5repack_verify.c @@ -397,7 +397,7 @@ h5repack_cmp_pl(const char *fname1, hid_t fname1_fapl, const char *fname2, hid_t H5TOOLS_GOTO_ERROR((-1), "h5trav_gettable failed"); /*------------------------------------------------------------------------- - * traverse the suppplied object list + * traverse the supplied object list *------------------------------------------------------------------------- */ for (i = 0; i < trav->nobjs; i++) { diff --git a/tools/test/h5copy/h5copygentest.c b/tools/test/h5copy/h5copygentest.c index 429ad42..2b40470 100644 --- a/tools/test/h5copy/h5copygentest.c +++ b/tools/test/h5copy/h5copygentest.c @@ -618,7 +618,7 @@ gen_region_ref(hid_t loc_id) goto out; } - /* create normal dataset which is refered */ + /* create normal dataset which is referred */ oid2 = H5Dcreate2(loc_id, REG_REF_DS2, H5T_STD_I8LE, sid, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (oid2 < 0) { HDfprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__); diff --git a/tools/test/h5copy/testh5copy.sh.in b/tools/test/h5copy/testh5copy.sh.in index 79b6fd5..6349ef4 100644 --- a/tools/test/h5copy/testh5copy.sh.in +++ b/tools/test/h5copy/testh5copy.sh.in @@ -88,7 +88,7 @@ test -d $TESTDIR || mkdir $TESTDIR # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi diff --git a/tools/test/h5diff/h5diff_plugin.sh.in b/tools/test/h5diff/h5diff_plugin.sh.in index 0ab169a..28f723e 100644 --- a/tools/test/h5diff/h5diff_plugin.sh.in +++ b/tools/test/h5diff/h5diff_plugin.sh.in @@ -158,7 +158,7 @@ done # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -236,7 +236,7 @@ TOOLTEST() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi @@ -327,7 +327,7 @@ TOOLTEST_ERR() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi diff --git a/tools/test/h5diff/h5diffgentest.c b/tools/test/h5diff/h5diffgentest.c index f7e5c52..6abd265 100644 --- a/tools/test/h5diff/h5diffgentest.c +++ b/tools/test/h5diff/h5diffgentest.c @@ -82,7 +82,7 @@ size_t H5TOOLS_MALLOCSIZE = (128 * 1024 * 1024); #define EXCLUDE_FILE3_2 "h5diff_exclude3-2.h5" /* compound type with multiple vlen string types */ #define COMP_VL_STRS_FILE "h5diff_comp_vl_strs.h5" -/* attribute compre with verbose level */ +/* attribute compare with verbose level */ #define ATTR_VERBOSE_LEVEL_FILE1 "h5diff_attr_v_level1.h5" #define ATTR_VERBOSE_LEVEL_FILE2 "h5diff_attr_v_level2.h5" /* file containing valid/invalid enum value mix */ @@ -2904,7 +2904,7 @@ test_group_recurse2(void) * FILE 2-3 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid4 = H5Fcreate(GRP_RECURSE2_EXT3, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -2938,7 +2938,7 @@ test_group_recurse2(void) * FILE 2-2 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid3 = H5Fcreate(GRP_RECURSE2_EXT2, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -2990,7 +2990,7 @@ test_group_recurse2(void) * FILE 2-1 *------------------------------------------------------------------------*/ - /* crate target file */ + /* create target file */ fileid2 = H5Fcreate(GRP_RECURSE2_EXT1, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); /*----------------------------------------------- @@ -4856,7 +4856,7 @@ test_data_nocomparables(const char *fname, int make_diffs) /* attr1 - non-compatible : different type */ write_attr(did2, 1, dims1_1, "attr1", tid_attr1, attr_data_ptr2); - /* attr2 - non-compatible : same rank, different dimention */ + /* attr2 - non-compatible : same rank, different dimension */ write_attr(did2, 1, (hsize_t *)attr2_dim_ptr, "attr2", H5T_NATIVE_INT, data3); /* attr3 - non-compatible : different rank */ @@ -7905,7 +7905,7 @@ gen_datareg(hid_t fid, int make_diffs /* flag to modify data buffers */) * Function: test_hyperslab * * Purpose: test diff by hyperslabs. create a dataset with 1GB dimensions - * by iterating trough 1KB hyperslabs + * by iterating through 1KB hyperslabs * *------------------------------------------------------------------------- */ diff --git a/tools/test/h5diff/testh5diff.sh.in b/tools/test/h5diff/testh5diff.sh.in index bd27dd0..6871463 100644 --- a/tools/test/h5diff/testh5diff.sh.in +++ b/tools/test/h5diff/testh5diff.sh.in @@ -455,7 +455,7 @@ done # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -518,7 +518,7 @@ TOOLTEST() { # don't add exit code check in pmode, as it causes failure. (exit code # is from mpirun not tool) # if any problem occurs relate to an exit code, it will be caught in - # serial mode, so the test is fullfilled. + # serial mode, so the test is fulfilled. if test $h5haveexitcode = 'yes' -a -z "$pmode"; then echo "EXIT CODE: $EXIT_CODE" >> $actual fi @@ -926,7 +926,7 @@ TOOLTEST h5diff_207.txt -c h5diff_basic2.h5 h5diff_basic2.h5 g2/dset8 g2/dset9 TOOLTEST h5diff_208.txt -c h5diff_dset_zero_dim_size1.h5 h5diff_dset_zero_dim_size2.h5 # non-comparable dataset with comparable attribute, and other comparable datasets. -# Also test non-compatible attributes with different type, dimention, rank. +# Also test non-compatible attributes with different type, dimension, rank. # All the comparables should display differences. TOOLTEST h5diff_220.txt -c non_comparables1.h5 non_comparables2.h5 /g1 @@ -1089,7 +1089,7 @@ TOOLTEST h5diff_474.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_li TOOLTEST h5diff_475.txt -v h5diff_danglelinks1.h5 h5diff_danglelinks2.h5 /ext_link1 # ############################################################################## -# # test for group diff recursivly +# # test for group diff recursively # ############################################################################## # root TOOLTEST h5diff_500.txt -v h5diff_grp_recurse1.h5 h5diff_grp_recurse2.h5 / / diff --git a/tools/test/h5dump/h5dumpgentest.c b/tools/test/h5dump/h5dumpgentest.c index 261fb09..e271511 100644 --- a/tools/test/h5dump/h5dumpgentest.c +++ b/tools/test/h5dump/h5dumpgentest.c @@ -236,7 +236,7 @@ typedef struct s1_t { #define ARRAY3_DIM2 3 /* VL string datatype name */ -/* TODO remove complier error not used, remove the link when everything is OK */ +/* TODO remove compiler error not used, remove the link when everything is OK */ /* #define VLSTR_TYPE "vl_string_type" */ /* "File 41" macros */ @@ -1128,7 +1128,7 @@ gent_compound_dt(void) H5Dclose(dataset); H5Gclose(group); - /* unamed data type */ + /* unnamed data type */ group = H5Gcreate2(fid, "/group2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); type = H5Tcreate(H5T_COMPOUND, sizeof(dset5_t)); @@ -1312,7 +1312,7 @@ gent_compound_dt2(void) H5Dclose(dataset); H5Gclose(group); - /* unamed data type */ + /* unnamed data type */ group = H5Gcreate2(fid, "/group2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); type = H5Tcreate(H5T_COMPOUND, sizeof(dset5_t)); @@ -1522,11 +1522,11 @@ gent_loop2(void) fid = H5Fcreate(FILE11, H5F_ACC_TRUNC, H5P_DEFAULT, H5P_DEFAULT); - /* create group object g1 and implcit path from root object */ + /* create group object g1 and implicit path from root object */ group = H5Gcreate2(fid, "/g1", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); H5Gclose(group); - /* create group object g2 and implcit path from root object */ + /* create group object g2 and implicit path from root object */ group = H5Gcreate2(fid, "/g2", H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); H5Gclose(group); @@ -2468,7 +2468,7 @@ gent_attrreg(void) static void gent_nestcomp(void) { - /* Compound memeber of the compound datatype*/ + /* Compound member of the compound datatype*/ typedef struct cmp_t { char a; float b[2]; @@ -2541,7 +2541,7 @@ gent_nestcomp(void) H5Tinsert(s2_tid, "c_name", HOFFSET(s2_t, c), H5T_NATIVE_DOUBLE); H5Tinsert(s2_tid, "b_name", HOFFSET(s2_t, b), H5T_NATIVE_FLOAT); - /* Insert compound memeber created above */ + /* Insert compound member created above */ H5Tinsert(s2_tid, "d_name", HOFFSET(s2_t, d), cmp_tid); /* @@ -5218,7 +5218,7 @@ gent_named_dtype_attr(void) sid = H5Screate(H5S_SCALAR); HDassert(sid > 0); - /* Create attribute on commited datatype */ + /* Create attribute on committed datatype */ aid = H5Acreate2(tid, F42_ATTRNAME, H5T_STD_I32LE, sid, H5P_DEFAULT, H5P_DEFAULT); HDassert(aid > 0); @@ -5735,7 +5735,7 @@ gent_filters(void) HDassert(ret >= 0); if (supports_comments) { - ret = H5Oset_comment_by_name(fid, "mytype", "This is a commited datatype", H5P_DEFAULT); + ret = H5Oset_comment_by_name(fid, "mytype", "This is a committed datatype", H5P_DEFAULT); HDassert(ret >= 0); } @@ -6803,7 +6803,7 @@ gent_attr_creation_order(void) goto out; /*------------------------------------------------------------------------- - * create a dataset with creation order tracked for attributes and atributes in it + * create a dataset with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6827,7 +6827,7 @@ gent_attr_creation_order(void) did = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a dataset without creation order tracked for attributes and atributes in it + * create a dataset without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6851,7 +6851,7 @@ gent_attr_creation_order(void) did = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a group with creation order tracked for attributes and atributes in it + * create a group with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6874,7 +6874,7 @@ gent_attr_creation_order(void) gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a group without creation order tracked for attributes and atributes in it + * create a group without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6897,7 +6897,7 @@ gent_attr_creation_order(void) gid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a named datatype with creation order tracked for attributes and atributes in it + * create a named datatype with creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ @@ -6923,7 +6923,7 @@ gent_attr_creation_order(void) tid = H5I_INVALID_HID; /*------------------------------------------------------------------------- - * create a named datatype without creation order tracked for attributes and atributes in it + * create a named datatype without creation order tracked for attributes and attributes in it *------------------------------------------------------------------------- */ diff --git a/tools/test/h5dump/testh5dump.sh.in b/tools/test/h5dump/testh5dump.sh.in index 9464302..f9f3734 100644 --- a/tools/test/h5dump/testh5dump.sh.in +++ b/tools/test/h5dump/testh5dump.sh.in @@ -1171,7 +1171,7 @@ TOOLTEST tcomp-1.ddl --enable-error-stack tcompound.h5 # test for named data types TOOLTEST tcomp-2.ddl --enable-error-stack -t /type1 --datatype /type2 --datatype=/group1/type3 tcompound.h5 TOOLTEST tcomp-2.ddl --enable-error-stack -N /type1 --any_path /type2 --any_path=/group1/type3 tcompound.h5 -# test for unamed type +# test for unnamed type TOOLTEST4 tcomp-3.ddl --enable-error-stack -t /#6632 -g /group2 tcompound.h5 # test complicated compound datatype TOOLTEST tcomp-4.ddl --enable-error-stack tcompound_complex.h5 diff --git a/tools/test/h5dump/testh5dumppbits.sh.in b/tools/test/h5dump/testh5dumppbits.sh.in index 6689749..eaf91fd 100644 --- a/tools/test/h5dump/testh5dumppbits.sh.in +++ b/tools/test/h5dump/testh5dumppbits.sh.in @@ -516,7 +516,7 @@ TOOLTEST tnofilename-with-packed-bits.ddl --enable-error-stack # Limits: # Maximum number of packed bits is 8 (for now). # Maximum integer size is 64 (for now). -# Maximun Offset is 63 (Maximum size - 1). +# Maximum Offset is 63 (Maximum size - 1). # Maximum Offset+Length is 64 (Maximum size). # Tests: # Normal operation on both signed and unsigned int datasets. diff --git a/tools/test/h5format_convert/h5fc_gentest.c b/tools/test/h5format_convert/h5fc_gentest.c index 09cca45..ccb64b5 100644 --- a/tools/test/h5format_convert/h5fc_gentest.c +++ b/tools/test/h5format_convert/h5fc_gentest.c @@ -381,7 +381,7 @@ error: /* * Function: gen_err_level() * - * Generate a file to test the situtation described in HDFFV-9434: + * Generate a file to test the situation described in HDFFV-9434: * Exceed the limit of v1-btree level * * Create a file with H5Pset_istore_k(fcpl, 1). diff --git a/tools/test/h5format_convert/testh5fc.sh.in b/tools/test/h5format_convert/testh5fc.sh.in index 762f43d..df083d1 100644 --- a/tools/test/h5format_convert/testh5fc.sh.in +++ b/tools/test/h5format_convert/testh5fc.sh.in @@ -313,7 +313,7 @@ TOOLTEST_MASK_OUT() { $RM $actual $actual_err $actual_sav $actual_err_sav fi } -# Same as TOOLTEST_OUT except only compares error outout +# Same as TOOLTEST_OUT except only compares error output TOOLTEST_ERR() { # Prepare expected and actual output expect="$TESTDIR/$1" diff --git a/tools/test/h5jam/testh5jam.sh.in b/tools/test/h5jam/testh5jam.sh.in index caa3416..191fef0 100644 --- a/tools/test/h5jam/testh5jam.sh.in +++ b/tools/test/h5jam/testh5jam.sh.in @@ -345,7 +345,7 @@ CHECK_NOUB() { # JAMTEST user_block file.h5 [--clobber] [ofile.h5] # # Test the 'jam' tool: -# 1. figure out the input and output, and the comparision +# 1. figure out the input and output, and the comparison # that will be done. # 2. call 'jam' with the appropriate arguments # 3. check the user block is correct in the output (Check_UB) diff --git a/tools/test/h5ls/h5ls_plugin.sh.in b/tools/test/h5ls/h5ls_plugin.sh.in index 29e982d..0077b07 100644 --- a/tools/test/h5ls/h5ls_plugin.sh.in +++ b/tools/test/h5ls/h5ls_plugin.sh.in @@ -166,7 +166,7 @@ VERIFY() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5ls/testh5ls.sh.in b/tools/test/h5ls/testh5ls.sh.in index ee0dad7..36583da 100644 --- a/tools/test/h5ls/testh5ls.sh.in +++ b/tools/test/h5ls/testh5ls.sh.in @@ -164,7 +164,7 @@ $SRC_H5LS_TESTFILES/tdset_idx.ls # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -230,7 +230,7 @@ TESTING() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5ls/testh5lsvds.sh.in b/tools/test/h5ls/testh5lsvds.sh.in index 4814f85..ab2d137 100644 --- a/tools/test/h5ls/testh5lsvds.sh.in +++ b/tools/test/h5ls/testh5lsvds.sh.in @@ -103,7 +103,7 @@ $SRC_H5LS_TESTFILES/vds/tvds-5.ls # RUNSERIAL is used. Check if it can return exit code from executalbe correctly. if [ -n "$RUNSERIAL_NOEXITCODE" ]; then - echo "***Warning*** Serial Exit Code is not passed back to shell corretly." + echo "***Warning*** Serial Exit Code is not passed back to shell correctly." echo "***Warning*** Exit code checking is skipped." h5haveexitcode=no fi @@ -169,7 +169,7 @@ TESTING() { # the `nerrors' global variable and (if $verbose is set) display up to $NLINS # lines of the actual output from the tool test. The actual output is not # removed if $HDF5_NOCLEANUP has a non-zero value. -# Arguemnts: +# Arguments: # $1 -- actual output filename to use # $2 and on -- argument for the h5ls tool TOOLTEST() { diff --git a/tools/test/h5repack/dynlib_rpk.c b/tools/test/h5repack/dynlib_rpk.c index b228344..bef032a 100644 --- a/tools/test/h5repack/dynlib_rpk.c +++ b/tools/test/h5repack/dynlib_rpk.c @@ -83,7 +83,7 @@ H5Z_filter_dynlib1(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_ add_on = (int)cd_values[0]; if (flags & H5Z_FLAG_REVERSE) { /*read*/ - /* Substract the "add on" value to all the data values */ + /* Subtract the "add on" value to all the data values */ while (buf_left > 0) { *int_ptr++ -= add_on; buf_left -= sizeof(int); diff --git a/tools/test/h5repack/dynlib_vrpk.c b/tools/test/h5repack/dynlib_vrpk.c index 5eac4f2..a45de65 100644 --- a/tools/test/h5repack/dynlib_vrpk.c +++ b/tools/test/h5repack/dynlib_vrpk.c @@ -91,7 +91,7 @@ H5Z_filter_dynlib4(unsigned int flags, size_t cd_nelmts, const unsigned int *cd_ add_on = (int)cd_values[0]; if (flags & H5Z_FLAG_REVERSE) { /*read*/ - /* Substract the "add on" value to all the data values */ + /* Subtract the "add on" value to all the data values */ while (buf_left > 0) { *int_ptr++ -= add_on; buf_left -= sizeof(int); diff --git a/tools/test/h5repack/h5repack.sh.in b/tools/test/h5repack/h5repack.sh.in index 1e54670..a241ea8 100644 --- a/tools/test/h5repack/h5repack.sh.in +++ b/tools/test/h5repack/h5repack.sh.in @@ -525,7 +525,7 @@ VERIFY_LAYOUT_ALL() #--------------------------------- # check the layout from a dataset - # check if the other layouts still exsit + # check if the other layouts still exist VERIFY "layouts" ( cd $TESTDIR @@ -1713,10 +1713,10 @@ TOOLTEST1 family tfamily%05d.h5 TOOLTEST bug1814 h5repack_refs.h5 # test attribute with various references (bug1797 / HDFFV-5932) -# the references in attribute of compund or vlen datatype +# the references in attribute of compound or vlen datatype TOOLTEST HDFFV-5932 h5repack_attr_refs.h5 -# Add test for memory leak in attirbute. This test is verified by CTEST. +# Add test for memory leak in attribute. This test is verified by CTEST. # 1. leak from vlen string # 2. leak from compound type without reference member # (HDFFV-7840, ) diff --git a/tools/test/h5repack/h5repackgentest.c b/tools/test/h5repack/h5repackgentest.c index a22af3d..c025891 100644 --- a/tools/test/h5repack/h5repackgentest.c +++ b/tools/test/h5repack/h5repackgentest.c @@ -27,9 +27,9 @@ * There is no restriction on the name, number, or structure of datasets and * groups in HDF5 file. * - * The inluded datatypes should be more than adequate to verify the correctness + * The included datatypes should be more than adequate to verify the correctness * of the behavior -- if one type can be consolidated from external storage, - * then thay all can. + * then they all can. */ #include "hdf5.h" diff --git a/tools/test/h5repack/h5repacktst.c b/tools/test/h5repack/h5repacktst.c index 1627b1b..4b8ba56 100644 --- a/tools/test/h5repack/h5repacktst.c +++ b/tools/test/h5repack/h5repacktst.c @@ -624,7 +624,7 @@ main(void) SKIPPED(); #endif - TESTING(" addding shuffle filter"); + TESTING(" adding shuffle filter"); /*------------------------------------------------------------------------- * test an individual object option @@ -653,7 +653,7 @@ main(void) *------------------------------------------------------------------------- */ - TESTING(" addding shuffle filter to all"); + TESTING(" adding shuffle filter to all"); if (h5repack_init(&pack_options, 0, FALSE) < 0) GOERROR; @@ -1592,17 +1592,17 @@ main(void) #endif /*------------------------------------------------------------------------- - * test file with aligment + * test file with alignment *------------------------------------------------------------------------- */ - TESTING(" file with aligment"); + TESTING(" file with alignment"); #ifdef H5_HAVE_FILTER_DEFLATE if (h5repack_init(&pack_options, 0, FALSE) < 0) GOERROR; - /* add the options for aligment */ + /* add the options for alignment */ pack_options.alignment = 1; pack_options.threshold = 1; @@ -1613,7 +1613,7 @@ main(void) if (h5repack_verify(FNAME8, FNAME8OUT, &pack_options) <= 0) GOERROR; - /* verify aligment */ + /* verify alignment */ { hsize_t threshold; hsize_t alignment; @@ -6244,7 +6244,7 @@ gen_refered_objs(hid_t loc_id) goto out; } - /* create normal dataset which is refered */ + /* create normal dataset which is referred */ did2 = H5Dcreate2(loc_id, NAME_OBJ_DS2, H5T_STD_I8LE, sid2, H5P_DEFAULT, H5P_DEFAULT, H5P_DEFAULT); if (did2 < 0) { HDfprintf(stderr, "Error: %s %d> H5Dcreate2 failed.\n", FUNC, __LINE__); @@ -6284,7 +6284,7 @@ out: * Generate object references to objects (dataset,group and named datatype) * * Note: - * copied from h5copygentest.c and upate to create named datatype + * copied from h5copygentest.c and update to create named datatype * * Programmer: Jonathan Kim (March 18, 2010) *------------------------------------------------------------------------*/ diff --git a/tools/test/h5repack/testfiles/README b/tools/test/h5repack/testfiles/README index 4096dee..4cb66f4 100644 --- a/tools/test/h5repack/testfiles/README +++ b/tools/test/h5repack/testfiles/README @@ -1,5 +1,5 @@ h5repack_nested_8bit_enum_deflated.h5: h5repack_nested_8bit_enum.h5: - enuberated 8bit type nested in compount type. Original file provided + enuberated 8bit type nested in compound type. Original file provided by a user (HDFFV-8667) as a test file. Used h5copy to extract only the Compound type dataset. The non-deflated version is produced by h5repack. diff --git a/tools/test/h5stat/testh5stat.sh.in b/tools/test/h5stat/testh5stat.sh.in index 647f06a..1b4e504 100644 --- a/tools/test/h5stat/testh5stat.sh.in +++ b/tools/test/h5stat/testh5stat.sh.in @@ -13,7 +13,7 @@ # # Tests for the h5stat tool # -# Modifcations: +# Modifications: # Vailin Choi; July 2013 # Add tests for -l, -m, -a options # diff --git a/tools/test/misc/h5clear_gentest.c b/tools/test/misc/h5clear_gentest.c index 999611a..04a2379 100644 --- a/tools/test/misc/h5clear_gentest.c +++ b/tools/test/misc/h5clear_gentest.c @@ -16,7 +16,7 @@ /* The HDF5 test files */ const char *FILENAME[] = { "h5clear_sec2_v3.h5", /* 0 -- sec2 file with superblock version 3 */ - "h5clear_log_v3.h5", /* 1 -- log file with superblock veresion 3 */ + "h5clear_log_v3.h5", /* 1 -- log file with superblock version 3 */ "h5clear_sec2_v0.h5", /* 2 -- sec2 file with superblock version 0 */ "h5clear_sec2_v2.h5" /* 3 -- sec2 file with superblock version 2 */ }; diff --git a/tools/test/misc/h5perf_gentest.c b/tools/test/misc/h5perf_gentest.c index 332e49c..248fd92 100644 --- a/tools/test/misc/h5perf_gentest.c +++ b/tools/test/misc/h5perf_gentest.c @@ -255,9 +255,9 @@ create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsiz buf_vlen_s = (char **)calloc(dim0, sizeof(char *)); buf_str = malloc(dim0 * sizeof(*buf_str)); - /* allocate array of doulbe pointers */ + /* allocate array of double pointers */ buf_double2d = (double **)calloc(dims2d[0], sizeof(double *)); - /* allocate a contigous chunk of memory for the data */ + /* allocate a contiguous chunk of memory for the data */ buf_double2d[0] = (double *)calloc(dims2d[0] * dims2d[1], sizeof(double)); /* assign memory city to pointer array */ for (i = 1; i < dims2d[0]; i++) @@ -396,7 +396,7 @@ create_perf_test_file(const char *fname, int ngrps, int ndsets, int nattrs, hsiz H5Dclose(did); /* 6 add compound data */ - HDsprintf(name, "%05d compund data", j); + HDsprintf(name, "%05d compound data", j); did = H5Dcreate(gid1, name, cmp_tid, sid_1d, H5P_DEFAULT, dcpl, H5P_DEFAULT); H5Dwrite(did, cmp_tid, H5S_ALL, H5S_ALL, H5P_DEFAULT, buf_comp); if (!j) diff --git a/tools/test/perform/direct_write_perf.c b/tools/test/perform/direct_write_perf.c index 762cd61..6fd9688 100644 --- a/tools/test/perform/direct_write_perf.c +++ b/tools/test/perform/direct_write_perf.c @@ -630,7 +630,7 @@ test_unix_write(void) TEST_ERROR; } else if (op_size == 0) { - printf(" unable to write sufficent data to file because %s \n", strerror(errno)); + printf(" unable to write sufficient data to file because %s \n", strerror(errno)); TEST_ERROR; } } diff --git a/tools/test/perform/zip_perf.c b/tools/test/perform/zip_perf.c index 4c7da15..040e774 100644 --- a/tools/test/perform/zip_perf.c +++ b/tools/test/perform/zip_perf.c @@ -267,7 +267,7 @@ usage(void) HDfprintf(stdout, " data you want [default: 0]"); HDfprintf(stdout, " -s S, --file-size=S Maximum size of uncompressed file [default: 64M]\n"); HDfprintf(stdout, " -B S, --max-buffer_size=S Maximum size of buffer [default: 1M]\n"); - HDfprintf(stdout, " -b S, --min-buffer_size=S Minumum size of buffer [default: 128K]\n"); + HDfprintf(stdout, " -b S, --min-buffer_size=S Minimum size of buffer [default: 128K]\n"); HDfprintf(stdout, " -p D, --prefix=D The directory prefix to place the file\n"); HDfprintf(stdout, " -r, --random-test Use random data to write to the file\n"); HDfprintf(stdout, " [default: no]\n"); |